View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9416_low_32 (Length: 258)

Name: NF9416_low_32
Description: NF9416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9416_low_32
NF9416_low_32
[»] scaffold0058 (1 HSPs)
scaffold0058 (21-258)||(22309-22546)
[»] chr2 (14 HSPs)
chr2 (15-258)||(19716428-19716671)
chr2 (15-258)||(19720991-19721234)
chr2 (27-256)||(23274384-23274613)
chr2 (22-258)||(23097436-23097672)
chr2 (15-257)||(12577143-12577385)
chr2 (16-235)||(28350687-28350906)
chr2 (43-235)||(20848401-20848592)
chr2 (18-193)||(21901391-21901566)
chr2 (56-116)||(22462933-22462993)
chr2 (56-116)||(23205245-23205305)
chr2 (56-116)||(23676849-23676909)
chr2 (56-217)||(11351163-11351324)
chr2 (59-148)||(24657113-24657202)
chr2 (56-116)||(23116511-23116571)
[»] scaffold0020 (2 HSPs)
scaffold0020 (27-256)||(98469-98698)
scaffold0020 (18-193)||(176239-176414)
[»] scaffold0076 (1 HSPs)
scaffold0076 (15-258)||(53297-53540)
[»] scaffold0222 (2 HSPs)
scaffold0222 (15-258)||(361-604)
scaffold0222 (18-258)||(21001-21241)
[»] chr6 (22 HSPs)
chr6 (27-256)||(19438026-19438255)
chr6 (25-258)||(14376942-14377175)
chr6 (15-258)||(18797712-18797955)
chr6 (18-235)||(24515433-24515650)
chr6 (22-163)||(21567014-21567155)
chr6 (15-253)||(10465864-10466102)
chr6 (24-229)||(19456074-19456279)
chr6 (24-229)||(19466219-19466424)
chr6 (29-235)||(24367445-24367651)
chr6 (58-256)||(34642645-34642843)
chr6 (18-198)||(16813722-16813902)
chr6 (15-235)||(21474645-21474865)
chr6 (25-115)||(8720731-8720821)
chr6 (18-202)||(25770922-25771106)
chr6 (14-157)||(19486309-19486452)
chr6 (75-157)||(15462459-15462541)
chr6 (25-116)||(30678050-30678141)
chr6 (16-110)||(25958770-25958864)
chr6 (27-116)||(23081587-23081676)
chr6 (59-148)||(27559029-27559118)
chr6 (74-154)||(20010577-20010657)
chr6 (56-116)||(21764976-21765036)
[»] chr7 (25 HSPs)
chr7 (15-258)||(14283232-14283475)
chr7 (22-235)||(11385294-11385507)
chr7 (25-258)||(13676599-13676832)
chr7 (15-235)||(16947330-16947550)
chr7 (14-252)||(13024498-13024736)
chr7 (15-197)||(14144870-14145052)
chr7 (15-257)||(18050811-18051053)
chr7 (27-256)||(15099473-15099702)
chr7 (15-252)||(12798362-12798596)
chr7 (15-253)||(12459781-12460019)
chr7 (29-235)||(13965540-13965746)
chr7 (29-235)||(26091670-26091876)
chr7 (29-235)||(40924689-40924895)
chr7 (15-235)||(19150182-19150402)
chr7 (15-235)||(20749581-20749801)
chr7 (29-235)||(26115462-26115668)
chr7 (29-258)||(21755560-21755789)
chr7 (36-235)||(49155472-49155671)
chr7 (22-256)||(12712528-12712762)
chr7 (19-234)||(14261108-14261323)
chr7 (170-258)||(14140827-14140915)
chr7 (25-117)||(12203668-12203760)
chr7 (56-116)||(9591653-9591713)
chr7 (56-116)||(16726362-16726422)
chr7 (56-116)||(17703376-17703436)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-258)||(164285-164518)
[»] chr3 (35 HSPs)
chr3 (15-258)||(16831627-16831870)
chr3 (25-256)||(31941692-31941923)
chr3 (25-256)||(31692294-31692525)
chr3 (15-258)||(16384471-16384714)
chr3 (19-256)||(12357630-12357867)
chr3 (18-258)||(18131449-18131689)
chr3 (15-257)||(13944812-13945054)
chr3 (15-258)||(17189161-17189404)
chr3 (15-258)||(24190091-24190334)
chr3 (15-257)||(8744489-8744731)
chr3 (25-258)||(16326816-16327051)
chr3 (29-235)||(10408778-10408984)
chr3 (29-235)||(47126754-47126960)
chr3 (27-256)||(17494436-17494664)
chr3 (18-252)||(11958283-11958517)
chr3 (29-235)||(28757129-28757335)
chr3 (18-191)||(14290634-14290807)
chr3 (19-256)||(16825382-16825619)
chr3 (18-256)||(35982970-35983208)
chr3 (27-256)||(12181133-12181362)
chr3 (98-208)||(11949107-11949217)
chr3 (18-198)||(2037014-2037194)
chr3 (18-198)||(2040755-2040935)
chr3 (18-198)||(14039593-14039773)
chr3 (16-115)||(15008684-15008783)
chr3 (27-157)||(13317680-13317810)
chr3 (14-117)||(15230531-15230634)
chr3 (14-117)||(15236399-15236502)
chr3 (22-112)||(12857602-12857692)
chr3 (90-217)||(12501751-12501878)
chr3 (72-157)||(10417201-10417286)
chr3 (56-223)||(11861165-11861332)
chr3 (56-121)||(23414941-23415006)
chr3 (87-115)||(13028527-13028555)
chr3 (56-116)||(23079168-23079228)
[»] scaffold0067 (4 HSPs)
scaffold0067 (15-258)||(64476-64719)
scaffold0067 (15-258)||(49054-49297)
scaffold0067 (15-258)||(58088-58331)
scaffold0067 (27-256)||(29813-30042)
[»] scaffold0074 (1 HSPs)
scaffold0074 (27-235)||(15282-15490)
[»] scaffold0034 (3 HSPs)
scaffold0034 (15-234)||(11780-11999)
scaffold0034 (18-256)||(1829-2067)
scaffold0034 (25-235)||(70582-70792)
[»] chr8 (12 HSPs)
chr8 (15-258)||(22054087-22054330)
chr8 (15-258)||(22027594-22027837)
chr8 (15-258)||(31413846-31414089)
chr8 (29-235)||(16268552-16268758)
chr8 (29-235)||(28984158-28984364)
chr8 (29-235)||(19985427-19985633)
chr8 (18-190)||(21928720-21928892)
chr8 (16-256)||(6606784-6607024)
chr8 (25-252)||(29300750-29300977)
chr8 (25-114)||(20391454-20391543)
chr8 (21-193)||(22374158-22374330)
chr8 (56-116)||(30310499-30310559)
[»] scaffold0664 (1 HSPs)
scaffold0664 (15-204)||(7279-7468)
[»] scaffold0348 (2 HSPs)
scaffold0348 (21-258)||(17364-17601)
scaffold0348 (15-258)||(4723-4966)
[»] scaffold0239 (1 HSPs)
scaffold0239 (15-258)||(9661-9904)
[»] scaffold0114 (1 HSPs)
scaffold0114 (15-258)||(40245-40488)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-258)||(263413-263656)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-256)||(54236-54478)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-258)||(203568-203811)
[»] scaffold0420 (1 HSPs)
scaffold0420 (14-256)||(8803-9045)
[»] scaffold0235 (2 HSPs)
scaffold0235 (15-258)||(8336-8579)
scaffold0235 (15-258)||(18550-18793)
[»] scaffold0203 (1 HSPs)
scaffold0203 (51-258)||(764-971)
[»] scaffold0004 (3 HSPs)
scaffold0004 (15-258)||(325894-326136)
scaffold0004 (15-206)||(319482-319673)
scaffold0004 (25-157)||(200361-200493)
[»] scaffold0243 (1 HSPs)
scaffold0243 (25-256)||(9656-9887)
[»] chr4 (20 HSPs)
chr4 (25-223)||(16150829-16151027)
chr4 (25-223)||(16154975-16155173)
chr4 (15-256)||(14993238-14993479)
chr4 (15-257)||(53750341-53750583)
chr4 (25-258)||(20893189-20893422)
chr4 (15-257)||(51603663-51603905)
chr4 (29-235)||(7357448-7357654)
chr4 (25-235)||(11204113-11204323)
chr4 (27-256)||(15266936-15267165)
chr4 (29-235)||(3261679-3261885)
chr4 (27-228)||(18259629-18259830)
chr4 (31-235)||(44658753-44658957)
chr4 (18-193)||(15073582-15073757)
chr4 (29-235)||(29450422-29450628)
chr4 (25-157)||(27903644-27903776)
chr4 (14-115)||(8708978-8709079)
chr4 (16-235)||(13879290-13879509)
chr4 (56-116)||(18224125-18224185)
chr4 (15-116)||(14697401-14697502)
chr4 (56-116)||(13513650-13513710)
[»] scaffold0010 (3 HSPs)
scaffold0010 (15-256)||(39207-39448)
scaffold0010 (56-154)||(180754-180852)
scaffold0010 (56-116)||(14753-14813)
[»] chr1 (17 HSPs)
chr1 (15-256)||(20832843-20833084)
chr1 (25-258)||(24096568-24096801)
chr1 (15-256)||(21738979-21739220)
chr1 (15-256)||(21742495-21742736)
chr1 (25-258)||(21961231-21961464)
chr1 (29-235)||(20297610-20297816)
chr1 (27-256)||(22015700-22015929)
chr1 (15-255)||(19857481-19857721)
chr1 (29-258)||(20074666-20074895)
chr1 (15-235)||(31536940-31537160)
chr1 (25-232)||(52988971-52989178)
chr1 (29-235)||(38909783-38909989)
chr1 (29-235)||(48426100-48426306)
chr1 (29-235)||(37680276-37680482)
chr1 (16-115)||(18273114-18273213)
chr1 (56-116)||(21228540-21228600)
chr1 (25-154)||(20853713-20853842)
[»] scaffold0765 (1 HSPs)
scaffold0765 (15-258)||(6131-6374)
[»] scaffold0156 (1 HSPs)
scaffold0156 (15-256)||(37128-37369)
[»] scaffold0706 (1 HSPs)
scaffold0706 (15-258)||(5083-5326)
[»] scaffold0367 (1 HSPs)
scaffold0367 (15-256)||(8895-9136)
[»] scaffold0317 (1 HSPs)
scaffold0317 (25-258)||(2818-3051)
[»] scaffold0106 (1 HSPs)
scaffold0106 (27-256)||(34526-34755)
[»] scaffold0035 (1 HSPs)
scaffold0035 (27-256)||(5994-6223)
[»] scaffold0167 (1 HSPs)
scaffold0167 (25-256)||(5242-5473)
[»] chr5 (21 HSPs)
chr5 (25-252)||(23077968-23078195)
chr5 (15-257)||(17266387-17266629)
chr5 (29-235)||(20345377-20345583)
chr5 (25-235)||(22505774-22505984)
chr5 (29-235)||(25851167-25851373)
chr5 (31-256)||(23563237-23563462)
chr5 (29-235)||(14884058-14884264)
chr5 (18-198)||(16258092-16258272)
chr5 (16-115)||(23669847-23669946)
chr5 (18-115)||(22591811-22591908)
chr5 (18-115)||(22595366-22595463)
chr5 (15-116)||(21870331-21870432)
chr5 (15-116)||(21874611-21874712)
chr5 (16-256)||(43122541-43122781)
chr5 (14-113)||(21983229-21983328)
chr5 (72-157)||(20824626-20824711)
chr5 (72-157)||(28892052-28892137)
chr5 (56-116)||(18782346-18782406)
chr5 (25-113)||(21561088-21561176)
chr5 (72-154)||(20779089-20779171)
chr5 (56-148)||(20803797-20803889)
[»] scaffold0751 (1 HSPs)
scaffold0751 (15-235)||(5391-5610)
[»] scaffold1433 (1 HSPs)
scaffold1433 (18-256)||(1188-1426)
[»] scaffold1032 (1 HSPs)
scaffold1032 (14-256)||(688-930)
[»] scaffold0404 (1 HSPs)
scaffold0404 (18-256)||(7933-8171)
[»] scaffold0266 (1 HSPs)
scaffold0266 (15-256)||(16826-17067)
[»] scaffold0108 (1 HSPs)
scaffold0108 (26-256)||(50294-50524)
[»] scaffold1426 (1 HSPs)
scaffold1426 (29-235)||(1495-1701)
[»] scaffold0017 (2 HSPs)
scaffold0017 (27-189)||(4339-4501)
scaffold0017 (59-223)||(16984-17148)
[»] scaffold0001 (1 HSPs)
scaffold0001 (25-235)||(514237-514447)
[»] scaffold0056 (1 HSPs)
scaffold0056 (27-256)||(769-998)
[»] scaffold1299 (1 HSPs)
scaffold1299 (22-258)||(1729-1965)
[»] scaffold2062 (1 HSPs)
scaffold2062 (15-230)||(746-961)
[»] scaffold0310 (1 HSPs)
scaffold0310 (25-252)||(11170-11397)
[»] scaffold0708 (1 HSPs)
scaffold0708 (14-252)||(5018-5256)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-256)||(63393-63634)
[»] scaffold0523 (2 HSPs)
scaffold0523 (15-256)||(5629-5870)
scaffold0523 (29-235)||(11631-11837)
[»] scaffold1517 (1 HSPs)
scaffold1517 (25-253)||(1371-1599)
[»] scaffold0476 (1 HSPs)
scaffold0476 (24-163)||(428-567)
[»] scaffold0053 (2 HSPs)
scaffold0053 (15-256)||(62646-62887)
scaffold0053 (56-256)||(65213-65413)
[»] scaffold1530 (1 HSPs)
scaffold1530 (15-150)||(799-934)
[»] scaffold0041 (1 HSPs)
scaffold0041 (29-235)||(41945-42151)
[»] scaffold0146 (1 HSPs)
scaffold0146 (27-256)||(170-399)
[»] scaffold0011 (1 HSPs)
scaffold0011 (15-184)||(153753-153922)
[»] scaffold0009 (2 HSPs)
scaffold0009 (25-248)||(251816-252039)
scaffold0009 (56-116)||(229767-229827)
[»] scaffold0118 (1 HSPs)
scaffold0118 (29-235)||(671-877)
[»] scaffold0029 (2 HSPs)
scaffold0029 (22-256)||(115751-115985)
scaffold0029 (56-157)||(93809-93910)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-254)||(51842-52078)
[»] scaffold0335 (1 HSPs)
scaffold0335 (25-256)||(4188-4419)
[»] scaffold0190 (1 HSPs)
scaffold0190 (25-252)||(30210-30437)
[»] scaffold0046 (1 HSPs)
scaffold0046 (18-256)||(70297-70535)
[»] scaffold2165 (1 HSPs)
scaffold2165 (25-162)||(687-824)
[»] scaffold0434 (1 HSPs)
scaffold0434 (15-116)||(5776-5877)
[»] scaffold0151 (1 HSPs)
scaffold0151 (27-163)||(428-564)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-202)||(29770-29957)
[»] scaffold0102 (1 HSPs)
scaffold0102 (25-163)||(42980-43118)
[»] scaffold0088 (1 HSPs)
scaffold0088 (67-258)||(30121-30312)
[»] scaffold1845 (1 HSPs)
scaffold1845 (25-142)||(1188-1305)
[»] scaffold0261 (4 HSPs)
scaffold0261 (80-237)||(12351-12508)
scaffold0261 (80-237)||(20531-20688)
scaffold0261 (15-54)||(12288-12327)
scaffold0261 (15-54)||(20468-20507)
[»] scaffold0276 (1 HSPs)
scaffold0276 (29-208)||(23811-23990)
[»] scaffold0104 (1 HSPs)
scaffold0104 (18-193)||(43296-43471)
[»] scaffold0309 (1 HSPs)
scaffold0309 (91-256)||(12916-13081)
[»] scaffold0068 (1 HSPs)
scaffold0068 (25-229)||(66992-67196)
[»] scaffold1056 (1 HSPs)
scaffold1056 (18-196)||(1970-2147)
[»] scaffold1914 (1 HSPs)
scaffold1914 (15-154)||(1104-1243)
[»] scaffold0405 (1 HSPs)
scaffold0405 (24-199)||(5848-6023)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-133)||(115936-116050)
[»] scaffold0609 (2 HSPs)
scaffold0609 (16-115)||(1269-1368)
scaffold0609 (16-94)||(7908-7986)
[»] scaffold0188 (1 HSPs)
scaffold0188 (25-106)||(33256-33337)
[»] scaffold0443 (1 HSPs)
scaffold0443 (66-208)||(12034-12176)
[»] scaffold0518 (1 HSPs)
scaffold0518 (25-81)||(2195-2251)
[»] scaffold0490 (1 HSPs)
scaffold0490 (15-95)||(3215-3295)
[»] scaffold0165 (1 HSPs)
scaffold0165 (123-254)||(12151-12282)
[»] scaffold0079 (1 HSPs)
scaffold0079 (56-223)||(36720-36887)
[»] scaffold0180 (1 HSPs)
scaffold0180 (25-111)||(30897-30983)
[»] scaffold0865 (1 HSPs)
scaffold0865 (15-112)||(1146-1243)
[»] scaffold0181 (1 HSPs)
scaffold0181 (90-223)||(28877-29010)
[»] scaffold0133 (1 HSPs)
scaffold0133 (15-112)||(28159-28256)
[»] scaffold0130 (1 HSPs)
scaffold0130 (25-112)||(3776-3863)
[»] scaffold0100 (1 HSPs)
scaffold0100 (25-116)||(16493-16584)
[»] scaffold0161 (1 HSPs)
scaffold0161 (28-117)||(36156-36245)
[»] scaffold0044 (1 HSPs)
scaffold0044 (56-116)||(17489-17549)
[»] scaffold0289 (1 HSPs)
scaffold0289 (56-134)||(99-177)
[»] scaffold0019 (1 HSPs)
scaffold0019 (74-116)||(171447-171489)
[»] scaffold0605 (1 HSPs)
scaffold0605 (25-154)||(1571-1700)
[»] scaffold0270 (2 HSPs)
scaffold0270 (15-116)||(7202-7303)
scaffold0270 (15-116)||(14332-14433)
[»] scaffold0040 (1 HSPs)
scaffold0040 (27-116)||(18174-18263)
[»] scaffold1881 (1 HSPs)
scaffold1881 (56-116)||(395-455)
[»] scaffold0546 (1 HSPs)
scaffold0546 (56-116)||(208-268)
[»] scaffold0509 (1 HSPs)
scaffold0509 (59-111)||(12162-12214)
[»] scaffold0285 (1 HSPs)
scaffold0285 (56-116)||(5327-5387)
[»] scaffold0109 (1 HSPs)
scaffold0109 (56-116)||(13039-13099)


Alignment Details
Target: scaffold0058 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 21 - 258
Target Start/End: Complemental strand, 22546 - 22309
Alignment:
Q  21 agactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtacta 120  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  22546 agactgaatgatgagaggaggcccaataggagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttttacta 22447  T
Q  121 aggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggcca 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||| |||||||||||    
T  22446 aggatgagaagaaatgcttcaagtgtggtcagaaaggacacaccctagttgattgcaagcgtggtgatgttgtttgctataactgcaatgaagagggcca 22347  T
Q  221 tatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||| ||||| |||| |||||||||||||||||    
T  22346 tatcagttctcagtgcacacagccgaagaaggttagaa 22309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 19716428 - 19716671
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  19716428 aagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 19716527  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||| |||  ||||||||||||| |||||||||| ||||| ||||||||| ||||    
T  19716528 gtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaaga 19716627  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||    
T  19716628 gggccatatcagttcgcagtgcacacagccgaagaaggttagaa 19716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 19720991 - 19721234
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  19720991 aagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 19721090  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||| |||  ||||||||||||| |||||||||| ||||| ||||||||| ||||    
T  19721091 gtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaaga 19721190  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||    
T  19721191 gggccatatcagttcgcagtgcacacagccgaagaaggttagaa 19721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 23274613 - 23274384
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||| |||| || |||||  ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  23274613 aatgatgagaggaggcccaagaggagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatg 23274514  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||||||||| ||||| ||||||||  ||  |||||| ||||| || ||  | || || || |||||||| || ||||||||||||||    
T  23274513 agaagaagtgcttcaggtgtggacagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatcag 23274414  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||||||||| ||||  ||||||||||||||    
T  23274413 ttcacagtgcacacaaccgaagaaggttag 23274384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 258
Target Start/End: Original strand, 23097436 - 23097672
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |  ||||| || |||||||||||||| |||||||||||||| ||    
T  23097436 gactgaatgatgagaggaggcccaagaggagagatgctcctgctgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaa 23097535  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccat 221  Q
     ||| ||||||| ||||||| |||||||||||||||||||||  |   | | |||||| | ||||||||||| ||||| || ||  | || ||||||||     
T  23097536 agatcagaagaagtgcttcaagtgtggtcagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccac 23097635  T
Q  222 atcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||||| || | ||| |||||| ||||||    
T  23097636 atcagttcacagtgcactcagccaaagaagattagaa 23097672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 12577385 - 12577143
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  12577385 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 12577286  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| |||||||||||||| || || || || |||||    
T  12577285 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaaga 12577186  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    ||| || |||||| | ||||| |||| ||||||||||||||||    
T  12577185 gggtcacatcagtactcagtgcacacagccgaagaaggttaga 12577143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 28350906 - 28350687
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||    
T  28350906 agcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 28350807  T
Q  116 tactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagag 215  Q
     | |   |||||||| || |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| |||| || | ||| ||  |||||||     
T  28350806 caatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaa 28350707  T
Q  216 ggccatatcagttcacagtg 235  Q
    || ||| ||||||| |||||    
T  28350706 ggtcatctcagttcgcagtg 28350687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 235
Target Start/End: Complemental strand, 20848592 - 20848401
Alignment:
Q  43 ccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcag 142  Q
    |||| ||||||| |||||||| |||||| ||| | |||||||| || |||||||||||||||||||||||||||   |  ||||| | ||| ||||||||    
T  20848592 ccaagaggagagatgctcctgttgagattgtt-gctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcag 20848494  T
Q  143 gtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtg 235  Q
    |||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || |||||||||||||||||    
T  20848493 gtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtg 20848401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 21901566 - 21901391
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| |||||||||||||||| || || || |||| || |||| ||||||| ||||| |||||||| || ||||| |||||||||||||||||||| |    
T  21901566 cagagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 21901467  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgt 193  Q
     |   |||||||| || |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| ||||    
T  21901466 atggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgtggtgatattgt 21901391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 22462933 - 22462993
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || |||||||||||||||||||||||||||    
T  22462933 tgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgt 22462993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 23205305 - 23205245
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||| | ||||| ||||||| ||| || || |||||||||||||||||||||||||||    
T  23205305 tgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 23676909 - 23676849
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||| | ||||| ||||||| ||| || || |||||||||||||||||||||||||||    
T  23676909 tgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 217
Target Start/End: Original strand, 11351163 - 11351324
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaa 155  Q
    ||||||||| ||||| || |||| ||| || || ||||||||||||||||| ||||||||| | ||||| |   ||||||| ||| |||||||  ||||     
T  11351163 tgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccaaaggaggtagagaaatgtttctggtgtggcaagaag 11351262  T
Q  156 ggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
    || || ||  ||  ||||||||||| | ||||| |||| || | ||| ||||| ||||||||    
T  11351263 ggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagaggg 11351324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 24657113 - 24657202
Alignment:
Q  59 tcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtgg 148  Q
    ||||||||||||   ||||| ||| || || ||||||||||||||||||| ||||||| || |||| | |||||| || ||| |||||||    
T  24657113 tcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtgg 24657202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 23116511 - 23116571
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||| | ||||| ||||||| ||| || || | |||||||||||||||||||||||||    
T  23116511 tgctccttcagagattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 23116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 98469 - 98698
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  98469 aatgatgagaggaggcccaagtggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatg 98568  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| || |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  98569 agaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagggccatatcag 98668  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| |||| |||||||||||||||    
T  98669 ttcgcagtgcacacagccgaagaaggttag 98698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 176414 - 176239
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||| | ||||| || |||| |||||| || || |||||||||||||||||||| |||     
T  176414 cagagactgaatgatgagaggaggcctaggaggagagatgctcctacagagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtg 176315  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgt 193  Q
         ||||||||||| || || ||||||||  |||||||||||||  ||  ||||||||||||||||||||||||    
T  176314 accgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatgttgt 176239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 53297 - 53540
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  53297 aagcagagattgaatgatgagaggaggcccaataggagagatgctcttgctgggatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 53396  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||| || |||||||| ||||| || |||||    
T  53397 gtactaaggatgagaagaaatgattcaggtgtggtcaaaaaggacacatcctagttgattgcaagcgtggtgacgtggtatgttataactgtaatgaaga 53496  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||||||||| || |||  |||||||||||||||||    
T  53497 gggccatatcagttcacaatgcacatagccgaagaaggttagaa 53540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 160; Significance: 2e-85; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 361 - 604
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||| ||||||    
T  361 aagcagatattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaaatgtggcaggaaaggccacaagagtgatgttt 460  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||| || || |||||||| |||||    
T  461 gtaccaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacagcctagctgattgcaagcgtggtgatgttgtttgctataactgcaatgaaga 560  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  561 gggccatatcagttcacagtgcacacagccgaagaaggttagaa 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 21241 - 21001
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| ||||||||||||||||||||||| ||||||| |||| |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||    
T  21241 cagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgta 21142  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
    |||| | ||||||||| |||||||||||||| ||||| ||||||||  || ||||||| ||||| || ||  |  | || || |||||||| || |||||    
T  21141 ctaaaggtgagaagaagtgcttcaggtgtggacagaagggacacacattagttgattgtaagcggggagacataatttgctataactgcaatgaggaggg 21042  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    || ||||||||||||||| ||||  ||||||||||||||||    
T  21041 ccgtatcagttcacagtgtacacaaccgaagaaggttagaa 21001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 9e-82; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 19438255 - 19438026
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||||||||||  |||||||||||||||||| ||||    
T  19438255 aatgatgagaggaggcccaagaggagagatgctcctgctgagatcgttcgttacaagtgtggtgagaaaggccacttgagtaatgtttgtactaaagatg 19438156  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    |||| || || |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  19438155 agaataagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagcgccatatcag 19438056  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| |||| |||||||||||||||    
T  19438055 ttcgcagtgcacacagccgaagaaggttag 19438026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 14376942 - 14377175
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||| ||||||||||||| |||||||| |||  | ||||| |||||||| || |||||||||||||||||||||||||||||||| ||    
T  14376942 tgaatgatgagaggagacccaataggagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggccacaagagtaatgtttgtactaaaga 14377041  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| |||||||||||||||||||||||||||||  ||  | |||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||    
T  14377042 tgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctaattgtaagcgtggtgatgttgtttgttataactgcaatgaagagggccacatc 14377141  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||| || || |||| |||||||||||||||||    
T  14377142 agttcgcaatgtacacagccgaagaaggttagaa 14377175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 18797955 - 18797712
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| |||||||||||||||||||||| ||||| | ||||||||  || || |||||||| ||||| || |||||||||||||||||||||||||    
T  18797955 aagcaaagattgaatgatgagaggaggcccaagaggagggatgctcctgtggatattgtttgttataagtgtggcgagaaaggccacaagagtaatgttt 18797856  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    | ||||| |||||| ||||||| ||||||||||||||||| |||||||| |||  |||||||||||||||||| ||||| || || |||||||| || ||    
T  18797855 gcactaaagatgagcagaaatgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgctataactgcaatgatga 18797756  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
     |||||||||||||||||||| || |  || |||||||||||||    
T  18797755 aggccatatcagttcacagtgcactcaaccaaagaaggttagaa 18797712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 24515433 - 24515650
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||| ||| || |||||||| ||||| || ||||||||||||||||||||||||||||    
T  24515433 cagaggctgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggccacaagagtaatgtttgta 24515532  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
    |||| ||||||||||| || |||||||||||||||||| ||||||| |||  |||||| ||| | || |||||||| ||||| |||||||| || || ||    
T  24515533 ctaaagatgagaagaagtgtttcaggtgtggtcagaaaagacacacactagctgattggaagaggggagatgttgtttgttataactgcaatgaggaagg 24515632  T
Q  218 ccatatcagttcacagtg 235  Q
     || |||||||| |||||    
T  24515633 tcacatcagttcgcagtg 24515650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 21567014 - 21567155
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| || ||||| |  ||||| || |||||||||||||| |||||||||||||||||    
T  21567014 gactgaatgatgagagaaggcccaagaggagagatgctcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtactaa 21567113  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacac 163  Q
     ||||||||||| |||||||||||||||||||||||||||||    
T  21567114 agatgagaagaagtgcttcaggtgtggtcagaaaggacacac 21567155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 10465864 - 10466102
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| | |||||||||| ||||||||||| ||||||| || |||||||||||| || ||||||||||| || || |||||||||||||| |||| ||    
T  10465864 aagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgctt 10465963  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||| |||||| || |||||||||||||| ||||||||||||  ||| || |||||||| ||  |||| || || |||||||| |||||    
T  10465964 gtggtagagatgagaggaaatgttttaggtgtggtcagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctataactgcaatgaaga 10466063  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggt 253  Q
     || ||||| ||||||||||| || | ||||||||||||    
T  10466064 aggtcatattagttcacagtgtactcagccgaagaaggt 10466102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 19456279 - 19456074
Alignment:
Q  24 ctgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagg 123  Q
    ||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||| | |||||| || || |||||||||||||||||||| |||  ||  |    
T  19456279 ctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagag 19456180  T
Q  124 atgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    |||||||||| |||||||||||  |||||||||||||||| |||  |||||| |||||||| ||  |||| || || ||||||||||| || || |||||    
T  19456179 atgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacattgtttgctataactgcaacgaggaaggtcatat 19456080  T
Q  224 cagttc 229  Q
     |||||    
T  19456079 tagttc 19456074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 19466424 - 19466219
Alignment:
Q  24 ctgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagg 123  Q
    ||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||| | |||||| || || |||||||||||||||||||| |||  ||  |    
T  19466424 ctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagag 19466325  T
Q  124 atgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    |||||||||| |||||||||||  |||||||||||||||| |||  |||||| |||||||| ||  |||| || || ||||||||||| || || |||||    
T  19466324 atgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacattgtttgctataactgcaacgaggaaggtcatat 19466225  T
Q  224 cagttc 229  Q
     |||||    
T  19466224 tagttc 19466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 24367651 - 24367445
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||| || |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  24367651 tgatgataggaggcccaagaggagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 24367552  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| |||||||| || ||  |||| |||||||| ||||| | ||| || ||||| ||||    
T  24367551 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcggggggacattgtctgttacaattgcaatggagaaggtcatattagtt 24367452  T
Q  229 cacagtg 235  Q
    |||||||    
T  24367451 cacagtg 24367445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 34642645 - 34642843
Alignment:
Q  58 ctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||| ||||| ||||| |  ||||| || ||||| |||||||| |||||||||||||| || ||||||||||| |||||||||||||| ||||| ||    
T  34642645 ctcctgcggagatagtttgctttaagtgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaaggg 34642744  T
Q  158 acacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     |||    ||  |||||| || ||||||||| ||||||| ||||||||||| |  ||||| ||||||||||| ||||| || |  ||||||||||||||    
T  34642745 tcacgtgttagctgattgtaaacgtggtgatattgtatgctacaactgcaatggggagggtcatatcagttctcagtgcactcaaccgaagaaggttag 34642843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 16813902 - 16813722
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| |||||||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |    
T  16813902 cagagattgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgca 16813803  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtt 198  Q
     |   || |||||||| |||||| | |||||  ||||| | |||||  ||  ||| ||||||||||||||| |||| ||||    
T  16813802 atggtgaggagaagaagtgcttccgatgtgggaagaaatggcacacaatagctgaatgcaagcgtggtgatattgtttgtt 16813722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 21474865 - 21474645
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||  |||||||||||||||||||| |  ||||||| ||||||| ||||||| ||||||| |||||| || || |||||||||||||||||||| |    
T  21474865 aagcagatgctgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtat 21474766  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||      ||||||||||| || ||| | |||||  |||||||||||||  |   ||| ||||||||||||||| |||| || ||||| ||  | |||||    
T  21474765 gtgaccgtgatgagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgcaagcgtggtgatattgtgtgctacaattgtgatgaaga 21474666  T
Q  215 gggccatatcagttcacagtg 235  Q
    ||| ||||| ||||| |||||    
T  21474665 gggtcatattagttctcagtg 21474645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 8720731 - 8720821
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    ||||||||||||||||||| || ||||||| || ||||| |||||| ||||| |||||||| || ||||||||||||||||||||||||||    
T  8720731 tgaatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 8720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 25771106 - 25770922
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||| ||||||| || |||| |||||| || || ||||||||||||| |||| | |||     
T  25771106 cagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagaataatttatgtg 25771007  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaa 202  Q
         ||||||||||| || ||  | |||||   ||||||||||||  ||| ||||||||||||||||||| |||| || |||||    
T  25771006 accgtgatgagaagaagtgttttcgatgtgggacgaaaggacacacattatctgattgcaagcgtggtgatattgtgtgctacaa 25770922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 19486309 - 19486452
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||| ||| |||||||||||||||| || || || |||| || |||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||||    
T  19486309 gaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtt 19486408  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    || | |   ||||||||||| |||||| | |||||  |||||||    
T  19486409 tgcaatggtgatgagaagaagtgcttccgatgtgggaagaaagg 19486452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 15462541 - 15462459
Alignment:
Q  75 tgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||||| || | ||||||||||||||||||||| || || |  |||||||||||||| ||||| || |||||||||||    
T  15462541 tgttacaagtgtggtgcgaaaggccacaagagtaatgtctgcaccagagatgagaagaaatgtttcagatgcggtcagaaagg 15462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 30678050 - 30678141
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||||||||||||| |  | || || | ||||||||||| | ||||| |||||||| || |||||  ||||||||||||||||||||    
T  30678050 tgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagagccacaagagtaatgtttgt 30678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 25958770 - 25958864
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaat 110  Q
    |||| |||||| ||||||||||||| || || || |||| ||||||| ||||||| ||||| |||| ||| ||  |||||||||||| |||||||    
T  25958770 agcaaagactggatgatgagaggagacctaagagtagagatgctcctactgagattgtttgctacaggtgtggtaagaaaggccacaggagtaat 25958864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 23081676 - 23081587
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    |||||||||||| |||| |  | || || |||||||| |||||| |||||||| |  || || |||||||||||||||||||||| ||||    
T  23081676 aatgatgagaggcggcctaggaagaaagatgctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaatgcttgt 23081587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 27559029 - 27559118
Alignment:
Q  59 tcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtgg 148  Q
    ||||||||||||   ||||| ||| || || ||||||||||||||||||| ||||||| || |||| | |||||| || ||| |||||||    
T  27559029 tcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtgg 27559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 20010577 - 20010657
Alignment:
Q  74 ttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaa 154  Q
    ||||||||| || || | ||| |||||||||||||||| ||| ||  | |||||||||||||| ||||| || ||||||||    
T  20010577 ttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaa 20010657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 21765036 - 21764976
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| || |||| ||| || || ||||||||||||||||| |||||||||    
T  21765036 tgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 21764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 14283232 - 14283475
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||||  |||||||| ||||||||||||| | |||||||||||||| || |||||||||||||||||||||||||    
T  14283232 aagcagagactcaatgatgagaggaggcccgttaggagagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 14283331  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || |||||  ||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  14283332 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaaga 14283431  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||| ||||||||  |||||||  ||| |||||||||||||||||    
T  14283432 gggtcatatcagcacacagtgcccacagccgaagaaggttagaa 14283475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 11385294 - 11385507
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||| || ||||| || |||||||||||||| |||||||||||||| ||    
T  11385294 gactgaatgatgagagaaggcccaagaggagagatgctcctgctgagatagtttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaa 11385393  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccat 221  Q
     ||||||||||| |||||||||||||||||||||||||||||  |   | | |||||| | ||||||||||| ||||| || ||  | || ||||||||     
T  11385394 agatgagaagaagtgcttcaggtgtggtcagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccac 11385493  T
Q  222 atcagttcacagtg 235  Q
    ||||||||||||||    
T  11385494 atcagttcacagtg 11385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 13676832 - 13676599
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| |||||||| ||  ||||||||||||||||||||||||||  ||| ||    
T  13676832 tgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaaga 13676733  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| | |||||||||||| ||||| ||||||||  ||  |||||| ||||| || ||  | || || || |||||||| || ||||||||||||    
T  13676732 tgagaagaagtacttcaggtgtggacagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatc 13676633  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||  |||  ||||||||||||||||    
T  13676632 agttcacagtgtgcacaaccgaagaaggttagaa 13676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 16947330 - 16947550
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||| |||||||| ||||||| |||||| | ||| || |||||||||||||| || || ||||||||||||||||||| ||    
T  16947330 aagcagagaatgaatgatgagagaaggcccaagaggagagatgctccagttgaaattgtttgttacaagtgtggtgaaaaaggccacaagagtaatgctt 16947429  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||| ||| ||  | ||||||||||||||||||||||| |||  ||| || |||||||| ||  |||| || |||||||||||||||||    
T  16947430 gtggtagagatgagaggaagtgtgttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggagacattgtttgctacaactgcaacgaaga 16947529  T
Q  215 gggccatatcagttcacagtg 235  Q
    ||| |||||||||||||||||    
T  16947530 gggtcatatcagttcacagtg 16947550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 13024736 - 13024498
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||||||  |||||||||| ||||||||||| ||||||| |||||||||||| || |||||||||||||| || || ||||||||||| || |||| |    
T  13024736 gaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttacaagtgtggtgaaaaaggccacaaaagcaatgct 13024637  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    | |  ||   |||||| |||||| |||||||||||| |||||||||||||||||  ||| || |||||||| ||  |||| || ||||||||||||||||    
T  13024636 tatggtagatatgagaggaaatgtttcaggtgtggttagaaaggacacaccctagctgaatgtaagcgtggagacattgtctgctacaactgcaacgaag 13024537  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaagg 252  Q
    | || ||||||||||| ||||| || | |||||||||||    
T  13024536 aaggtcatatcagttctcagtgtactcagccgaagaagg 13024498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 14145052 - 14144870
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||| |||||||  ||||  || |||||||||||||||||||| ||||    
T  14145052 aagcagagacttaatgatgagaggaggccatataggagagatgctcctgctgagatagtttgttttaagtatggcgagaaaggccacaagagtaacgttt 14144953  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgt 197  Q
    |||| ||||| |||||||| ||||||||||||||||| || || |||    ||  ||||||||||||||||||||||||||||    
T  14144952 gtaccaaggaggagaagaagtgcttcaggtgtggtcaaaagggtcacgtgttagctgattgcaagcgtggtgatgttgtatgt 14144870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 18050811 - 18051053
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  18050811 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 18050910  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| ||||||||||||||||| || || || |||||    
T  18050911 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgttataattgtaatgaaga 18051010  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    ||| || |||||| | ||||| |||| ||||||||||||||||    
T  18051011 gggtcacatcagtactcagtgcacacagccgaagaaggttaga 18051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 15099473 - 15099702
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| || ||||| | |||||| || |||||||||||||||||||| ||||||  ||  ||||    
T  15099473 aatgatgggaggaggcccaagaggagagatgctcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatg 15099572  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||||||||||||||| |||||||| |||  |||||| |||||||| ||  | || ||||| |||||||| || || || ||||||||    
T  15099573 agaagaagtgcttcaggtgtggtcagaagggacacactctagatgattgtaagcgtggggacatcgtttgttataactgcaatgaggaaggtcatatcag 15099672  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| || | |||||||||||||||    
T  15099673 ttcgcagtgtacgcagccgaagaaggttag 15099702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 12798362 - 12798596
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||| ||| ||||||| ||||| | |||| || ||||||| |||||| |||   ||||||||||||||||||||||    
T  12798362 aagcagagattgaatgatgagaggaggctcaagaggagagatgctcatactgatattgtttgtttcaagtgtgga---aaaggccacaagagtaatgttt 12798458  T
Q  115 gt-actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    || ||  || |||||||||| |||||||||||||||||||||||||||||  ||  ||||||  ||||||| |||||||| || |||||||| || ||||    
T  12798459 gtgaccgag-atgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtgagcgtggggatgttgtttgctacaactgtaatgaag 12798557  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaagg 252  Q
    | || ||||||||||| ||||| |||| ||| |||||||    
T  12798558 aaggtcatatcagttcgcagtgtacacagcctaagaagg 12798596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 12460019 - 12459781
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| | |||||||||| ||||||||||| ||||||| || |||||||||||| || ||||||||||| || || |||||||||||||| |||| ||    
T  12460019 aagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgctt 12459920  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||| |||||| || |||||||||||||| ||||||||||||  ||| || |||||||| ||  |||| || || |||||||| |||||    
T  12459919 gtggtagagatgagaggaaatgttttaggtgtggtcagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctataactgcaatgaaga 12459820  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggt 253  Q
     || ||||| ||||||||||| || | ||||||||||||    
T  12459819 aggtcatattagttcacagtgtactcagccgaagaaggt 12459781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 13965540 - 13965746
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| | ||| |||||||| || ||||||| |||||||||||||||||||  ||| |||||     
T  13965540 tgatgataggaggcccaagaggagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaaagatgat 13965639  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    |  ||||||||||||||||||||||| || ||||  |||  ||| ||||||||||| ||| |||| || ||||| ||||| | |||||| ||||||||||    
T  13965640 agaaaatgcttcaggtgtggtcagaagggtcacagtctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagtt 13965739  T
Q  229 cacagtg 235  Q
    |||||||    
T  13965740 cacagtg 13965746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 26091670 - 26091876
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  26091670 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 26091769  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  26091770 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 26091869  T
Q  229 cacagtg 235  Q
    |||||||    
T  26091870 cacagtg 26091876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 40924689 - 40924895
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  40924689 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 40924788  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  40924789 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 40924888  T
Q  229 cacagtg 235  Q
    |||||||    
T  40924889 cacagtg 40924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 19150402 - 19150182
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||  ||||||||||||||||||| || ||||||| ||||||| |||| || ||||| | |||||| || |||||||||||||| |||||||| |    
T  19150402 aagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgt 19150303  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  |   ||| ||||||| ||||| |||||||||||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || |||||    
T  19150302 gtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaaga 19150203  T
Q  215 gggccatatcagttcacagtg 235  Q
     || ||||| ||||| |||||    
T  19150202 aggacatattagttcgcagtg 19150182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 20749801 - 20749581
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||  ||||||||||||||||||| || ||||||| ||||||| |||| || ||||| | |||||| || |||||||||||||| |||||||| |    
T  20749801 aagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgt 20749702  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  |   ||| ||||||| ||||| |||||||||||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || |||||    
T  20749701 gtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaaga 20749602  T
Q  215 gggccatatcagttcacagtg 235  Q
     || ||||| ||||| |||||    
T  20749601 aggacatattagttcgcagtg 20749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 26115462 - 26115668
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||   |  |||||     
T  26115462 tgatgataggaggcccaagaggagagatgctccggctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 26115561  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||| ||||| | ||| || ||||| |||     
T  26115562 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagta 26115661  T
Q  229 cacagtg 235  Q
    |||||||    
T  26115662 cacagtg 26115668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 258
Target Start/End: Complemental strand, 21755789 - 21755560
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| | |||||| || ||||||| ||||||  ||||||| |||||||||||||| || || |||||||||||||| |||||||||  ||| ||||||    
T  21755789 tgatgacatgaggcctaagaggagagatgctccctctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgag 21755690  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| || ||||||||||||||||| || |||||  ||  ||| || |||||||| ||| |||| || ||||||||||| | |||||| ||||| || |    
T  21755689 aggaagtgtttcaggtgtggtcagaagggtcacactttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatattagct 21755590  T
Q  229 cacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||  |   |||||||||||||||||    
T  21755589 cacagtgtcctgagccgaagaaggttagaa 21755560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 49155671 - 49155472
Alignment:
Q  36 aggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaat 135  Q
    ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  ||||| | ||| |    
T  49155671 aggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagt 49155572  T
Q  136 gcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtg 235  Q
    ||||||||||||||||||| || || |   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || |||||||||||||||||    
T  49155571 gcttcaggtgtggtcagaagggtcatagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagttcacagtg 49155472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 12712528 - 12712762
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    |||||||||||||||| || |||||  | ||||   |||||| |||||| ||||| |  ||||| || |||||||||||||| |||||||||||||| ||    
T  12712528 gactgaatgatgagagaagacccaagggaagagacactcctgttgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaa 12712627  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccat 221  Q
     ||||||||||| |||||||||||||| ||||| || |||    ||  ||||||||| ||||||||| ||||||| || |||||||| |  ||||| |||    
T  12712628 agatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaaacgtggtgatattgtatgctataactgcaatggggagggtcat 12712727  T
Q  222 atcagttcacagtgaacacggccgaagaaggttag 256  Q
    |||| ||| ||||| || |  | ||||||||||||    
T  12712728 atcaattctcagtgcactcaacggaagaaggttag 12712762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 14261108 - 14261323
Alignment:
Q  19 agagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtac 118  Q
    ||||||||||||||||||||||||| ||  |||||  ||||||| |||||||  |||| | |||||| || |||||||||||||||||||||||  ||      
T  14261108 agagactgaatgatgagaggaggcctaaggggagatatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgcgtca 14261207  T
Q  119 taaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggc 218  Q
    |   ||||||||||| | ||| |||||| ||||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || || || ||     
T  14261208 tcgagatgagaagaagtactttaggtgtagtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaagga 14261307  T
Q  219 catatcagttcacagt 234  Q
    ||||| ||||| ||||    
T  14261308 catattagttcgcagt 14261323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 14140915 - 14140827
Alignment:
Q  170 tgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||| |||||| | ||||| |||| |||||||||||||||||    
T  14140915 tgattgcaagcgtggtgatgttgtatgttataattgtaacgaagagggccacatcagtactcagtgcacacagccgaagaaggttagaa 14140827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 12203668 - 12203760
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||||||||||||| || || ||||||| || |||||||| ||| ||||| |||||||| || ||||| ||||||||||||||||||||||    
T  12203668 tgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgta 12203760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9591713 - 9591653
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| || |||| ||| || || ||||||||||||||||| |||||||||    
T  9591713 tgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 9591653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 16726362 - 16726422
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || ||||||| ||| || || | |||||||||||||||||||||||||    
T  16726362 tgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 16726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 17703376 - 17703436
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || ||||||| ||| || || | |||||||||||||||||||||||||    
T  17703376 tgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 17703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 164285 - 164518
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  164285 tgaatgatgagaggaggcccaataggagagacgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgttctaagga 164384  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| || ||||||||||||||||||||||||||  || ||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||    
T  164385 tgagaagaagtgtttcaggtgtggtcagaaaggacacactttagttgattgcaagcgtggtaatgttgtttgttataactgcaatgaagaaggccatatc 164484  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||| || |  || | |||||||||||||||||    
T  164485 agttcgcattatactcagccgaagaaggttagaa 164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 16831627 - 16831870
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||  ||||| || |||||||||||||||||||||||||    
T  16831627 aagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgttt 16831726  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || |||    ||   || |||||||||||||||||||||||||| ||||||||||||||    
T  16831727 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgttagcggactgcaagcgtggtgatgttgtatgttataactgcaacgaaga 16831826  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||    
T  16831827 gggccatatcagtacacagtgcacacagccgaagaaggttagaa 16831870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 256
Target Start/End: Complemental strand, 31941923 - 31941692
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| || ||    
T  31941923 tgaatgatgagaggaggcccaataggagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaaga 31941824  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| || ||||||||||||||||| |||||||| |||  ||| |||||||||||||||||||| ||||| || ||||| || ||||||||||||    
T  31941823 tgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgactgcaagcgtggtgatgttgtttgttataattgcaatgaggagggccatatc 31941724  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    |||||| |||| || | |||||||||||||||    
T  31941723 agttcatagtgtacgcagccgaagaaggttag 31941692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 31692294 - 31692525
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| || ||    
T  31692294 tgaatgatgagaggaggcccaataggagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtaccaaaga 31692393  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| || |||||||||||| |||| |||||||| |||  ||| |||||| ||||||||||||| ||||| |||||||| || ||||||||||||    
T  31692394 tgagaagaagtgtttcaggtgtggttagaagggacacactctagctgactgcaagagtggtgatgttgtttgttataactgcaatgaggagggccatatc 31692493  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    ||||||||||| || | |||||||||||||||    
T  31692494 agttcacagtgtacgcagccgaagaaggttag 31692525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 16384471 - 16384714
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||  ||||| || ||||||| |||||||||||| ||||    
T  16384471 aagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaagtccacaagagtaacgttt 16384570  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || ||||   |   ||||||||||||||||||||||||||| || || || || |||||    
T  16384571 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttggctgattgcaagcgtggtgatgttgtatgctataattgtaatgaaga 16384670  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| | ||||| |||| |||||||||||||||||    
T  16384671 gggccatatcagtactcagtgcacacagccgaagaaggttagaa 16384714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 12357630 - 12357867
Alignment:
Q  19 agagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtac 118  Q
    |||| ||||||||||||||||||||||| ||||||| | ||||||||||||| ||||| |||||||| || || |||||||||||||||||||| |||      
T  12357630 agaggctgaatgatgagaggaggcccaagaggagagatactcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtga 12357729  T
Q  119 taaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggc 218  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||  ||  |||||| ||||| || || ||||| || || |||||||| || || ||     
T  12357730 taaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgttgtttgctataactgcaatgaggaaggt 12357829  T
Q  219 catatcagttcacagtgaacacggccgaagaaggttag 256  Q
    ||||||||||| ||||| ||||  ||||||||||||||    
T  12357830 catatcagttcgcagtgtacacaaccgaagaaggttag 12357867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 18131449 - 18131689
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||| |||||| | ||| |||||||| || |||||||||||||||||||||||||||     
T  18131449 cagagactgaataatgagaggaggcccaagaggagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggccacaagagtaatgtttgtg 18131548  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     ||| ||||||||||| ||||||||||||||||||||||||||| |  ||  | |||| |||||||| ||||| || || || |||||||| || ||  |    
T  18131549 ataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacgcattagctaattgtaagcgtggggatgtagtgtgctataactgcaatgaggaaag 18131648  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
     ||||| ||||| ||||| || |  | ||||||||||||||    
T  18131649 tcatattagttcgcagtgtactcaactgaagaaggttagaa 18131689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 13945054 - 13944812
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  13945054 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 13944955  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| |||||||||||||| || || || || |||||    
T  13944954 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaaga 13944855  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    |||||| |||||| | ||||| |||| ||||||||||||||||    
T  13944854 gggccacatcagtactcagtgcacacagccgaagaaggttaga 13944812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 17189404 - 17189161
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| | ||||||||||||||| |||| ||||||| |||||||| ||| || |||||||  ||||| || |||||||||||||| ||||| ||||    
T  17189404 aagcagagatttaatgatgagaggaggtccaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgttt 17189305  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| || ||||||||||| |||||||||||||||||||||||||||||  |   | | |||||| | ||||||||||| ||||| || ||  | || ||    
T  17189304 gtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacgttggctaactgcaagtggggtgatgttgtttgttataattgtgatgagga 17189205  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||| |||||||||||||| || | ||| |||||| ||||||    
T  17189204 gggccacatcagttcacagtgtactcagccaaagaagattagaa 17189161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 24190334 - 24190091
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||  ||| ||||||| |||||||| ||| || |||||||  ||||| || |||||||||||||| ||||| ||||    
T  24190334 aagcagagattgaatgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgttt 24190235  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| || ||||||||||| |||||||||||||||||||||||||||||  |   | | |||||| | ||||||||||| ||||| || ||  | || ||    
T  24190234 gtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacgttggctaactgcaagtggggtgatgttgtttgttataattgtgatgagga 24190135  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||| |||||||||||||| || | ||| |||||| ||||||    
T  24190134 gggccacatcagttcacagtgtactcagccaaagaagattagaa 24190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 8744489 - 8744731
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  8744489 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 8744588  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| |||||||||||||| || || || || |||||    
T  8744589 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaaga 8744688  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    |||||| |||||| | ||||| ||||  |||||||||||||||    
T  8744689 gggccacatcagtactcagtgcacacaaccgaagaaggttaga 8744731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 16326816 - 16327051
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagag-ctgctcctgctgaga-tcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaag 122  Q
    |||||||||| ||||| ||||| ||||||| ||||||||||||||| | |||||||| ||||| || || |||||||||||||| |||||||||  ||      
T  16326816 tgaatgatgataggagacccaagaggagagactgctcctgctgagacttgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtaga 16326915  T
Q  123 gatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccata 222  Q
    ||||||| |||||| ||||||||||||||||| |||||||   ||  ||| || |||||||| ||  |||| || ||||||||||| | |||||| ||||    
T  16326916 gatgagaggaaatgtttcaggtgtggtcagaagggacacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcata 16327015  T
Q  223 tcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||| ||||| ||   |||||||||||||||||    
T  16327016 tcagttcgcagtgtactaagccgaagaaggttagaa 16327051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 10408984 - 10408778
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||| |||||||| ||||||||||| || || |||||||||||||||||||||||||||   |  |||||     
T  10408984 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 10408885  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  10408884 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 10408785  T
Q  229 cacagtg 235  Q
    |||||||    
T  10408784 cacagtg 10408778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 47126960 - 47126754
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  47126960 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 47126861  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  47126860 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 47126761  T
Q  229 cacagtg 235  Q
    |||||||    
T  47126760 cacagtg 47126754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 17494664 - 17494436
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||| | ||||||| ||||| | ||| || || || ||||||||||||||||||||||||  ||  ||||    
T  17494664 aatgatgagaggaggcccaagaggagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggccacaagagtaatgtttgtgatagagatg 17494565  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||| ||||||||||||||||||||||||| |||  ||| || ||| |||| ||  |||| || || ||||||||||| || || ||||| ||    
T  17494564 agaagaagtgc-tcaggtgtggtcagaaaggacacacactagctgactgtaagtgtggagacattgtttgctataactgcaacgaggaaggtcatattag 17494466  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| || |  ||||||||||||||    
T  17494465 ttcgcagtgtactcaaccgaagaaggttag 17494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 11958283 - 11958517
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| |||||||||| |||||||  || ||||||| |||||||||||| || |||||||| ||||| || || ||||||||||| || |||| ||||     
T  11958283 cagagaatgaatgatgataggaggcttaagaggagagatgctcctgctgaaattgtttgttataagtgtggtgaaaaaggccacaaaagcaatgcttgtg 11958382  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     ||  ||||||| ||| || ||||||||||||||||||||||| || |||  ||| || |||||||  ||  |||| || |||||||||||||||||  |    
T  11958383 gtagagatgagaggaagtgtttcaggtgtggtcagaaaggacatacactagctgaatgtaagcgtgaggacattgtctgctacaactgcaacgaagaaag 11958482  T
Q  218 ccatatcagttcacagtgaacacggccgaagaagg 252  Q
     |||||||||||| |||| || | |||||||||||    
T  11958483 tcatatcagttcatagtgtactcagccgaagaagg 11958517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 28757335 - 28757129
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  28757335 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 28757236  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||| ||||| | ||| || ||||| ||||    
T  28757235 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagtt 28757136  T
Q  229 cacagtg 235  Q
    |||||||    
T  28757135 cacagtg 28757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 14290634 - 14290807
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || ||||||||||||||||||||||| |||     
T  14290634 cagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtg 14290733  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgtt 191  Q
     |   ||||||||||| ||||| |||||||| ||||||||||||||  ||  |||||| |||||||| ||||||    
T  14290734 attgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgtt 14290807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 16825382 - 16825619
Alignment:
Q  19 agagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtac 118  Q
    ||||| |||| ||||||||||||||||| | ||||| ||||||| |||| || ||||||| |||||| || || ||||||||||||||||||||||||      
T  16825382 agagattgaaagatgagaggaggcccaagatgagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtga 16825481  T
Q  119 taaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggc 218  Q
        ||||||||||| ||||||||||||||| | |||||||||||  ||  |||||| |||||||| ||  |||| || ||||||| ||| || || ||     
T  16825482 ccgtgatgagaagaagtgcttcaggtgtggtaaaaaaggacacactttagctgattgtaagcgtggggacattgtttgctacaacttcaatgaggaaggt 16825581  T
Q  219 catatcagttcacagtgaacacggccgaagaaggttag 256  Q
    ||||||||||  ||||| || | ||| |||||||||||    
T  16825582 catatcagtttgcagtgtacgcagcctaagaaggttag 16825619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 35983208 - 35982970
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt- 116  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||| ||| |||  |||| | |||||| || ||||||||||||||||||||||| |||     
T  35983208 cagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgtgattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtg 35983109  T
Q  117 actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagg 216  Q
    ||  | ||||||||||| || ||||| ||||| ||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || || || |    
T  35983108 accga-gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaag 35983010  T
Q  217 gccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | ||||| ||||| || || || | ||| |||||||||||    
T  35983009 gacatattagttcgcattgtacgcagcctaagaaggttag 35982970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 12181362 - 12181133
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||||||||||| |||| ||||||| ||||||| |||| ||  |||| | |||||| || || ||||||||||||||||| || |||  ||  ||||    
T  12181362 aatgatgagaggaggaccaagaggagagatgctcctactgacattttttgcttcaagtgtggtgaaaaaggccacaagagtaaagtctgtgatagagatg 12181263  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||| ||||||| |||||||||||| |||  |||||| |||| ||| ||  |||| ||||| || |||||| | || || ||||||||    
T  12181262 agaagaagtgcttcagttgtggtcggaaaggacacacactagctgattgtaagcttggggacattgtttgttataattgcaacaaggaaggtcatatcag 12181163  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    |||  |||| || |  ||||||||||||||    
T  12181162 ttcgtagtgtacgcaaccgaagaaggttag 12181133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 11949107 - 11949217
Alignment:
Q  98 ccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgt 197  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||   ||  |||||| ||||| || |||||||| ||     
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattgtaagcggggagatgttgtttgc 11949206  T
Q  198 tacaactgcaa 208  Q
    || ||||||||    
T  11949207 tataactgcaa 11949217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 2037014 - 2037194
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| |    
T  2037014 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2037113  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtt 198  Q
     |   || |||||||| |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| |||| ||||    
T  2037114 atggtgaggagaagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtt 2037194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 2040755 - 2040935
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| |    
T  2040755 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2040854  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtt 198  Q
     |   || |||||||| |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| |||| ||||    
T  2040855 atggtgaggagaagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtt 2040935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 14039773 - 14039593
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| |    
T  14039773 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 14039674  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtt 198  Q
     |   || |||||||| |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| |||| ||||    
T  14039673 atggtgaggagaagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtt 14039593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 15008684 - 15008783
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  15008684 agcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtgagagaggccacaagagtaatgtttg 15008783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 13317680 - 13317810
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||||||||||||| |   |||||| |||||||| |||  | |||||||||||||| || |  ||||||||||| ||||||||||| || || ||||    
T  13317680 aatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcaaaaggccacaaaagtaatgtttgcaccaaagatg 13317779  T
Q  127 agaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||| || ||||| |||||||| |||||    
T  13317780 agaagaagtgtttcagatgtggtcaaaaagg 13317810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 15230634 - 15230531
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||| ||| | ||||||||||||||||| || || | || || |||||||||||| ||||| |||||||| || || || ||||||||||||||||||    
T  15230634 gaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccacaagagtaatgtt 15230535  T
Q  114 tgta 117  Q
    ||||    
T  15230534 tgta 15230531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 15236502 - 15236399
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||| ||| | ||||||||||||||||| || || | || || |||||||||||| ||||| |||||||| || || || ||||||||||||||||||    
T  15236502 gaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagtgtggtgaaaagggccacaagagtaatgtt 15236403  T
Q  114 tgta 117  Q
    ||||    
T  15236402 tgta 15236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 12857602 - 12857692
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgt 112  Q
    |||||||||||||||||||||| || ||||||| ||||||| ||||||| || |||| |||||| || || || ||||||| |||||||||    
T  12857602 gactgaatgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaagggccacatgagtaatgt 12857692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 12501878 - 12501751
Alignment:
Q  90 gagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatg 189  Q
    ||||||||||||||||| ||||||||| || |||| |  |||||||| ||| |||||||  |||| || |||||  ||  ||||||||||| |||||||     
T  12501878 gagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgattgcaagcatggtgata 12501779  T
Q  190 ttgtatgttacaactgcaacgaagaggg 217  Q
    |||| |||| ||| ||||| ||||||||    
T  12501778 ttgtgtgtttcaattgcaaggaagaggg 12501751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 10417201 - 10417286
Alignment:
Q  72 gtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||||| || || | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || |||||||||||    
T  10417201 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaagg 10417286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 11861332 - 11861165
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaa 155  Q
    ||||||||| ||||| || | || ||| || || ||||||||||||||||| ||||||||| |  |||| | ||||||||| ||| |||||||| ||||     
T  11861332 tgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttctggtgtggtaagaag 11861233  T
Q  156 ggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    || || ||  ||  ||||||||||| | ||||| |||| || | ||| | ||| |||||||| |||||    
T  11861232 ggtcatactttagctgattgcaagcatagtgatattgtgtgcttcaattccaaggaagagggtcatat 11861165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 23414941 - 23415006
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    ||||||||| ||||| || |||| ||| |  || ||||||||||||||||||||||||||| ||||    
T  23414941 tgctcctgcggagattgtctgtttcaactatggcgagaaaggccacaagagtaatgtttgtcctaa 23415006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 115
Target Start/End: Original strand, 13028527 - 13028555
Alignment:
Q  87 ggagagaaaggccacaagagtaatgtttg 115  Q
    |||||||||||||||||||||||||||||    
T  13028527 ggagagaaaggccacaagagtaatgtttg 13028555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 23079168 - 23079228
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||||| ||| |||||||  || || || ||||||||||||||||| |||||||||    
T  23079168 tgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgt 23079228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 144; Significance: 8e-76; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 64476 - 64719
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  64476 aagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 64575  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||  | ||||||||||||||||||| || || || || ||  | |||||    
T  64576 gtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaaga 64675  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||    
T  64676 gggccatattagttcacagtgcacacaaccgaagaaggttagaa 64719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 49054 - 49297
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||    
T  49054 aagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgttt 49153  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||  | ||||||||||||||||||| || || || || ||  | |||||    
T  49154 gtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaaga 49253  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||    
T  49254 gggccatattagttcacagtgcacacaaccgaagaaggttagaa 49297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 58088 - 58331
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||    
T  58088 aagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgttt 58187  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||  | ||||||||||||||||||| || || || || ||  | |||||    
T  58188 gtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaaga 58287  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||    
T  58288 gggccatattagttcacagtgcacacaaccgaagaaggttagaa 58331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 30042 - 29813
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| || |||| |||| || ||||| | |||||| || |||||||||||||||||||| ||||||  ||  ||||    
T  30042 aatgatgagaggaggcccaagaggagagatgttcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatg 29943  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||||||||||||| || |||||||| |||  |||||| ||| |||| ||  | || ||||| |  ||||| || || || ||||||||    
T  29942 agaagaagtgcttcaggtgtggtcaaaagggacacactctagctgattgtaagtgtggggacatcgtttgttatatttgcaatgaggaaggtcatatcag 29843  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| || |  ||||||||||||||    
T  29842 ttcgcagtgtacgcaaccgaagaaggttag 29813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 15490 - 15282
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||||||||||| |||||||||||||||  | || || ||||| || ||||||||||||||||||||||||||||||||||| |    
T  15490 aatgatgagaggaggcccaataggagagatgctcctgctgagattttctgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaggacg 15391  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  15390 agaagaagtgcttcaggtgtggtcagaaatgacacactctagctgattgcaagcgtggtgatgttgtttgttataactgcaatgaagagggccatatcag 15291  T
Q  227 ttcacagtg 235  Q
    |||||||||    
T  15290 ttcacagtg 15282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 11780 - 11999
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  11780 aagcagagacttaatgatgagaggaggcccaagaggagagatgctcctactgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 11879  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||| |||||||  || ||||||||    
T  11880 gtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgacattgtttgttacatttggaacgaaga 11979  T
Q  215 gggccatatcagttcacagt 234  Q
     || ||||||||||| ||||    
T  11980 aggtcatatcagttcgcagt 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 1829 - 2067
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| ||||||||||||||||||||||| |||| || |||||||||||| || ||||| |||||||| || |||||||||||||||||||||||||||     
T  1829 cagaggctgaatgatgagaggaggcccaagaggatagatgctcctgctgaaattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtg 1928  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     ||| ||||||||||| |||||||||||||||||||||||||||||  ||  |||||| ||||| || || ||||| || || |||||||| || || ||    
T  1929 ataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgttgtttgctataactgcaatgaggaagg 2028  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     ||||||||||| ||||| ||||  ||||||||||||||    
T  2029 tcatatcagttcgcagtgtacacaaccgaagaaggttag 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 70792 - 70582
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||| |||| |   |||||| |||||||| |||  | |||||||||||||| || | ||||||||||||| ||||||| || || || ||    
T  70792 tgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagggtaatgtctgcaccaaaga 70693  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| || ||||| || ||||| ||||| ||     |   ||| ||||||||||| ||| |||| ||||| ||||| || || |||||||| ||     
T  70692 tgagaagaagtgtttcagatgcggtcataaaggtcatgtgttggctgaatgcaagcgtggagatattgtttgttataactgtaatgaggagggccacatt 70593  T
Q  225 agttcacagtg 235  Q
    |||||||||||    
T  70592 agttcacagtg 70582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 22054330 - 22054087
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||| |||||||  ||||| || |||||||||||||||||||||||||    
T  22054330 aagcagagacttaatgatgagaggaggccgaataggagagatgcttctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgttt 22054231  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||| ||||||||||| || |||    ||   ||||||||||||||||||||||||||||| ||||||||||||||    
T  22054230 gtaccaaggatgagaagaagtgcttcagatgtggtcagaagggtcaccttttagcggattgcaagcgtggtgatgttgtatgttataactgcaacgaaga 22054131  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||||    
T  22054130 gggccatatcagtacacagtgcacacagccgaagaaggatagaa 22054087  T

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Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 22027594 - 22027837
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||    
T  22027594 aagcaaagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggccacaagagtaatgttt 22027693  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| || ||||||||||| |||||||||||||||||||| || |||||  ||  |||||| ||| | || || ||||| || || |||| ||| |||||    
T  22027694 gtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgtaagaggggagacgttgtttgctataactacaatgaaga 22027793  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||    
T  22027794 gggccatatcagttctcagtgcacacagccgaagaaggttagaa 22027837  T

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Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 31413846 - 31414089
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||| || ||||||| |||||| || || |||||||| ||||| |||| ||    
T  31413846 aagcagagaatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccataagagcaatgctt 31413945  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||| ||| || || ||||||||||||||||||||||| |||  ||| || |||||||| ||  |||| || |||||||||||||||||    
T  31413946 gtggtagagatgagaggaagtgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggggacattgtttgctacaactgcaacgaaga 31414045  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
     || ||||||||||||||||| || | | ||||||||| |||||    
T  31414046 aggtcatatcagttcacagtgtactcagtcgaagaaggctagaa 31414089  T

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Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 16268552 - 16268758
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||||||| || | ||||| ||||||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||  ||| ||||||    
T  16268552 tgatgacaggaggcctaagaagagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgag 16268651  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || || | ||||  ||| ||||||||||| ||| |||| || ||||| ||||| | |||||| ||||||||||    
T  16268652 aggaagtgcttcaggtgtggtcagaagggtcatagcctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagtt 16268751  T
Q  229 cacagtg 235  Q
    |||||||    
T  16268752 cacagtg 16268758  T

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Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 28984364 - 28984158
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||| | |||||| |||||||||||||| || |||||||||||||||||||||||||||   |  |||||     
T  28984364 tgatgataggaggcccaagaggagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 28984265  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  28984264 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 28984165  T
Q  229 cacagtg 235  Q
    |||||||    
T  28984164 cacagtg 28984158  T

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Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 19985633 - 19985427
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    ||||||||||||||| || ||||||| ||||||| ||||||| ||||||| |||||| || || ||| |||||||||||||||| |||      ||||||    
T  19985633 tgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaagtgtggcgaaaaaagccacaagagtaatgtatgtgaccgtgatgag 19985534  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    ||||| |  ||||| ||||| |||||| |||||||  ||  |||||||||| |||| |||||||| || || || ||  | |||||||| ||||| || |    
T  19985533 aagaagtatttcagatgtggacagaaatgacacacattagctgattgcaagagtggggatgttgtttgctataattgtgatgaagaggggcatattagct 19985434  T
Q  229 cacagtg 235  Q
    |||||||    
T  19985433 cacagtg 19985427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 21928892 - 21928720
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt- 116  Q
    ||||| |||||||||||||||||||| |  ||||||| ||||||| |||||||  |||||| |||||| || || || |||||| ||||||||||  ||     
T  21928892 cagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaagtgtggcgaaaagggccacgagagtaatgtaagtg 21928793  T
Q  117 actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgt 190  Q
    ||  | ||||||||||| || ||||| ||||| ||||||||||||||  |   |||||||||||||||||||||    
T  21928792 accga-gatgagaagaagtgtttcagatgtggacagaaaggacacactttgggtgattgcaagcgtggtgatgt 21928720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 6606784 - 6607024
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || || |||| || |||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||||||    
T  6606784 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 6606883  T
Q  116 tactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagag 215  Q
     | |   || |||||||| |||||| | |||||  |||| || || ||  ||  ||| ||||||||||| ||| |||| || | ||| ||  | |||||     
T  6606884 caatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggggatattgtttgcttcaattgtgatgaagaa 6606983  T
Q  216 ggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    || ||| ||||||||||||| |||| ||| |||||||||||    
T  6606984 ggacatctcagttcacagtgtacacagcctaagaaggttag 6607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 29300750 - 29300977
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||||||||| ||| ||| || ||| ||||| || |||||||  ||||| || || | |||||||||||| |||| ||||  ||  ||    
T  29300750 tgaatgatgataggaggcccaagaggggagatgttcccgctgaaattgtttgttttaagtgtggtgaaagaggccacaagagcaatgcttgtggtagaga 29300849  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||| | ||| || || ||||||||||||| ||||||||| |||  ||| || |||||||| ||  |||| |  || |||||||| ||||| || ||||||    
T  29300850 tgaaaggaagtgttttaggtgtggtcagagaggacacacactagctgaatgtaagcgtggggacattgtctactataactgcaatgaagaaggtcatatc 29300949  T
Q  225 agttcacagtgaacacggccgaagaagg 252  Q
    ||||| ||||| || | |||||||||||    
T  29300950 agttctcagtgtactcagccgaagaagg 29300977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 20391543 - 20391454
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||||||||||| || || || |||| || |||| ||||||| ||||| |||||||| || ||||| |||||||||||||||||||    
T  20391543 tgaatgatgagaggagacctaagagtagagatgttccttctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgttt 20391454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 22374330 - 22374158
Alignment:
Q  21 agactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtacta 120  Q
    ||||| ||||| ||||||||||| |  ||||||| | ||||| ||||||| || |||| |||||| || || |||| ||||||||||||||| |||        
T  22374330 agacttaatgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtggtgaaaaagaccacaagagtaatgtatgtgacc 22374231  T
Q  121 aggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgt 193  Q
      ||||| ||||| || || ||||||||  |||||||||||||  ||  ||||||||||||||||||| ||||    
T  22374230 gtgatgaaaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatattgt 22374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30310499 - 30310559
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || ||||||| ||| || || |||||||||||||||||||||||||||    
T  30310499 tgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 30310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 7468 - 7279
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  7468 aagcagaggttgaatgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaatgttt 7369  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaact 204  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||| ||||    
T  7368 gtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtttgttataact 7279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 17364 - 17601
Alignment:
Q  21 agactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtacta 120  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| |    
T  17364 agactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 17463  T
Q  121 aggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggcca 220  Q
    ||||||||||||| ||||| ||||||| ||| || || |||||  ||   |||| || |||||||||||||||||||||||| |||||||||||||||||    
T  17464 aggatgagaagaagtgctttaggtgtgatcaaaagggtcacacattagcggattacatgcgtggtgatgttgtatgttacaattgcaacgaagagggcca 17563  T
Q  221 tatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||| | ||||| |||| |||||||||||||||||    
T  17564 tatcagtactcagtgtacacagccgaagaaggttagaa 17601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 4723 - 4966
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||||||||||    
T  4723 aagcaaagactgaatgatgagaggaggccaaataggagagatgctcctgctgagatagtctgttataagtgtggccagaaaggccacaagagtaatgttt 4822  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| || ||||||||||| |||||||||||||| ||||| || ||||   ||  |||||||||||||||||||||||||||||| ||||||||||| ||    
T  4823 gtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacatgttagctgattgcaagcgtggtgatgttgtatgttataactgcaacgagga 4922  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| | ||||| |||| ||||| |||||||||||    
T  4923 gggccatatcagtactcagtgtacacagccgaggaaggttagaa 4966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 9661 - 9904
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||| |||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||||||  ||||| || |||||||||||||||||||||||||    
T  9661 aagctgagacttaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgttt 9760  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| ||||||||||||||| |||| || |||    ||   ||||||||||||||||||||||||||||| ||||||||||||||    
T  9761 gtaccaaggatgagaagaagtgcttcaggtgtggttagaagggtcaccttttagcggattgcaagcgtggtgatgttgtatgttataactgcaacgaaga 9860  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    | ||||||||||| ||||||| |||| |||||||||||||||||    
T  9861 gtgccatatcagtacacagtgcacactgccgaagaaggttagaa 9904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 40488 - 40245
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||    
T  40488 aagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgttt 40389  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| || ||||| ||||| ||||||||||||||| |||| || ||||   ||   |||||||||||| |||||||||||||||| ||||||||||||||    
T  40388 gtaccaaagatgataagaagtgcttcaggtgtggttagaagggtcacatgttagcggattgcaagcgttgtgatgttgtatgttataactgcaacgaaga 40289  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| | ||||| |||| |||||||||||||||||    
T  40288 gggccatatcagtactcagtgcacacagccgaagaaggttagaa 40245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 263656 - 263413
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||  ||||| || |||||||||||||||||||||||||    
T  263656 aagcagagactgaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgttt 263557  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || |||    ||   |||||||||  |||||||||||||||||| ||||| ||||||||    
T  263556 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgtaacgaaga 263457  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| ||||||| |||| | |||||||||||||||    
T  263456 gggccatatcagtacacagtgcacacagtcgaagaaggttagaa 263413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 54478 - 54236
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||||||  |||||||||||||||||||||||||  ||  ||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  54478 gaagcagaggttgaatgatgagaggaggcccaatagatgaaatgctcttgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtt 54379  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    |||||||| ||||||||||| || ||||||||||||||||| |||||||| |||  | |||||||||||||||||||||| ||||| |||||||| ||||    
T  54378 tgtactaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagcttattgcaagcgtggtgatgttgtttgttataactgcaatgaag 54279  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    |||| |||||||| |||| ||| ||||  ||||| ||||||||    
T  54278 agggtcatatcagctcacggtgcacacaaccgaaaaaggttag 54236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 203811 - 203568
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||| |||||| |||||||  ||||| || |||||||||||||||||||||||||    
T  203811 aagcagagactgaatgatgagaggaggcccgttaggagagatgctcctggtgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgttt 203712  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || |||    ||   |||||||||  |||||||||||||||||| ||||| ||||||||    
T  203711 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgtaacgaaga 203612  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||| ||||||| |||| | |||||||||||||||    
T  203611 gggccatatcagtacacagtgcacacagtcgaagaaggttagaa 203568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 9045 - 8803
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    ||||||||  |||||||||||||| || ||||| ||||||| |||||||| |||||| |||||||| ||||| || ||||| ||||||||||||||||||    
T  9045 gaagcagaagctgaatgatgagagaagacccaagaggagagatgctcctgatgagattgtttgttataagtgtggcgagaatggccacaagagtaatgtt 8946  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||| |||  ||||||||||||||||||  |||| || ||||||||||||||||    
T  8945 tgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgacattgtttgctacaactgcaacgaag 8846  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | |||||||||||||| ||||| || |  ||||||||||||||    
T  8845 aaggccatatcagttcgcagtgcactcaaccgaagaaggttag 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 8336 - 8579
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||| ||||| ||||||| ||||| || ||| || |||||||| ||||| || ||||| |||||||||||||||||||    
T  8336 aagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgttt 8435  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||| |||  |||||||||||||||||| ||||| ||||| |||||||| ||| |    
T  8436 gtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaata 8535  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||| ||||| |  |  ||||||||||||||||    
T  8536 gggccatatcagttcgcagtgcaatcaaccgaagaaggttagaa 8579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 18550 - 18793
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||| ||||| ||||||| ||||| || ||| || |||||||| ||||| || ||||| |||||||||||||||||||    
T  18550 aagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgttt 18649  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||| |||  |||||||||||||||||| ||||| ||||| |||||||| ||| |    
T  18650 gtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaata 18749  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||| ||||| |  |  ||||||||||||||||    
T  18750 gggccatatcagttcgcagtgcaatcaaccgaagaaggttagaa 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 51 - 258
Target Start/End: Original strand, 764 - 971
Alignment:
Q  51 agagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtc 150  Q
    |||| ||||||||||||||| |||||||||||||| ||  |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  764 agagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtc 863  T
Q  151 agaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaa 250  Q
    ||||||||||||| |||  ||||||||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||||| || |  |||| |||    
T  864 agaaaggacacactctagctgattgcaagcgtggtgatattgtttgttataactgcaatgaagagggtcatatcagttcacagtgtacgcaaccgaggaa 963  T
Q  251 ggttagaa 258  Q
    ||||||||    
T  964 ggttagaa 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 124; Significance: 7e-64; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 326136 - 325894
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||||||||| |    
T  326136 aagcagaggctgaatgatgagaggaggcc-aataggagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagaccacaagagtaatgtct 326038  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||| ||||||||||| ||||||| |||||||||||||||||||||  ||  | |||| ||||| || |||||||| ||||| |||||||| |||||    
T  326037 gtgataaagatgagaagaagtgcttcaagtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgttataactgcaatgaaga 325938  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||||||||||||| ||||  || |||||||||||||    
T  325937 gggccatatcagttcacagtgcacacaaccaaagaaggttagaa 325894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 206
Target Start/End: Complemental strand, 319673 - 319482
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||| || ||||||||||||||||||||||| |    
T  319673 aagcagaggctgaatgatgagaggaggcccaataggagagatgctcctgctgggattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtct 319574  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgc 206  Q
    ||  ||| ||||||||||| |||||||||||||||||||||||||||||  ||  | |||| ||||| || |||||||| ||||| ||||||    
T  319573 gtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgttataactgc 319482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 200361 - 200493
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||| || || || ||||  | ||||  |||||| ||||| |||||||| || ||||| |||||||||||||||||||| | |   ||    
T  200361 tgaatgatgagaggagacctaagagaagagaagttcctaatgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtga 200460  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||| |||||| | |||||  |||||||    
T  200461 tgagaagaagtgcttccgatgtgggaagaaagg 200493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 9656 - 9887
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    ||||||||||||||||||| || ||||||| |||||||||||| || ||||| |||||||| || ||||| ||||||||||||||||| |||  ||||||    
T  9656 tgaatgatgagaggaggccaaacaggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgtgataagga 9755  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||| || || |||||||| || |||||||||||     
T  9756 tgagaagaagtgcttcaggtgtggtcagaaaggacacaccctagttgattgtaagcggggagatgttgtttgctataactgcaatgaggagggccatata 9855  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    |||||||| || || |  ||||||||||||||    
T  9856 agttcacaatgtacgcaaccgaagaaggttag 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 16151027 - 16150829
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||| ||||||| |||||||| ||| || ||||| || ||||| || |||||||||||||||||||||||||||||||| ||    
T  16151027 tgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaaga 16150928  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    ||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| || || |||||  | |||||||| |||||    
T  16150927 tgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatat 16150829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 16155173 - 16154975
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||| ||||||| |||||||| ||| || ||||| || ||||| || |||||||||||||||||||||||||||||||| ||    
T  16155173 tgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaaga 16155074  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    ||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| || || |||||  | |||||||| |||||    
T  16155073 tgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatat 16154975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 14993238 - 14993479
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||||| |||| || ||||||| |||||| || || ||||||||||||||||||||||    
T  14993238 aagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgttt 14993337  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||      ||  ||||||| |||||||||||||||||||||||||||||  ||  ||||||||||| ||| |||||||| || ||||||||||| || ||    
T  14993338 gtgaccgtgagaagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcatggggatgttgtttgctacaactgcaatgagga 14993437  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||||||||| ||||| || |  || |||||||||||    
T  14993438 aggtcatatcagttcgcagtgtacgcaacctaagaaggttag 14993479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 53750341 - 53750583
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  53750341 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 53750440  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| |||||||||||||| || || || || |||||    
T  53750441 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaaga 53750540  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    |||||| |||||| | ||||| |||| ||||||||||||||||    
T  53750541 gggccacatcagtactcagtgcacacagccgaagaaggttaga 53750583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 20893422 - 20893189
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || || |||||| ||||||| |||||||||  ||  ||    
T  20893422 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggcaacaagagcaatgtttgtggtagaga 20893323  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| ||| |||||||||||||||||||| |||||||   ||  ||| ||||||||||| ||| |||| |  ||||||||||| |||||||| ||||||    
T  20893322 tgagaggaagtgcttcaggtgtggtcagaagggacacaatttagctgaatgcaagcgtggggatattgtctactacaactgcaatgaagaggggcatatc 20893223  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||| ||||| ||   |||||||||||||||||    
T  20893222 agttcgcagtgtactgagccgaagaaggttagaa 20893189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 51603663 - 51603905
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  51603663 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgttt 51603762  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| || ||||| ||||| ||||| || ||||  |||   ||||||||||| ||||||||||| || || || || || |||||    
T  51603763 gtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtgtgctataattgtaatgaaga 51603862  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    |||||| |||||| | ||||| |||| ||||||||||||||||    
T  51603863 gggccacatcagtactcagtgcacacagccgaagaaggttaga 51603905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 7357654 - 7357448
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||| | || ||||||||||||||||| ||||||| |  ||| ||||||    
T  7357654 tgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgag 7357555  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| || ||||||||||| | |||||| ||||| ||||    
T  7357554 aggaagtgcttcaggtgtggtcagaagggtcacaatttagctgaatgcaagcgtggagacattgtctgctacaactgcaatggagagggtcatattagtt 7357455  T
Q  229 cacagtg 235  Q
    |||||||    
T  7357454 cacagtg 7357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 11204113 - 11204323
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||| ||||| ||||||| ||||||| ||||||| |||||||| ||||| || ||||||||||||||||| |||||||||  ||  ||    
T  11204113 tgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtagaga 11204212  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||| |  ||||||||||||||||||||||| || ||||  |||  | | ||||||||||| ||| |||| || ||||| ||||| | |||||| ||||||    
T  11204213 tgatagaaaatgcttcaggtgtggtcagaagggtcacagtctagcttaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatc 11204312  T
Q  225 agttcacagtg 235  Q
    |||||||||||    
T  11204313 agttcacagtg 11204323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 15267165 - 15266936
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||| |  | || ||||| | |||||| |  ||||| ||||| |||||||||||||||   |  ||||    
T  15267165 aatgatgagaggaggcccaagaggagagatgctcctacgaatattgtttgcttcaagtgtgatgagaagggccataagagtaatgtttgtgacagagatg 15267066  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||||||||||||||||||||||||| |||  |||||| |||| ||| ||  |||| || || |||||||||||||| || ||||||||    
T  15267065 agaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcatggagacattgtttgctataactgcaacgaagaaggtcatatcag 15266966  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    |||  |||| || | |||||||||||||||    
T  15266965 ttcgtagtgtacgcagccgaagaaggttag 15266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 3261679 - 3261885
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  3261679 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 3261778  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  3261779 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 3261878  T
Q  229 cacagtg 235  Q
    |||||||    
T  3261879 cacagtg 3261885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 18259830 - 18259629
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| |||| || ||||||| || | || ||||| |  ||||| || || ||||||||||||||||||||||||  ||  ||||    
T  18259830 aatgatgagaggaggcccaagaggacagatgctcctactaatattgtttgctttaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatg 18259731  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||||||||||||||||||||||||| |||  |||||| |||||||| ||  |||| || || |||||||| || || || ||||||||    
T  18259730 agaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcgtggggacattgtttgctataactgcaatgaggaaggtcatatcag 18259631  T
Q  227 tt 228  Q
    ||    
T  18259630 tt 18259629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 235
Target Start/End: Original strand, 44658753 - 44658957
Alignment:
Q  31 atgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaa 130  Q
    |||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  ||||| |     
T  44658753 atgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgatag 44658852  T
Q  131 gaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttca 230  Q
    ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||| |||| |||||||| ||||| | |||  | ||||| ||||||    
T  44658853 gaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggatattgtctgttacaattgcaatggagaatgtcatattagttca 44658952  T
Q  231 cagtg 235  Q
    |||||    
T  44658953 cagtg 44658957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 15073757 - 15073582
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||| ||||||| || |||| |||||| || || |||||||||||||||||||| |||     
T  15073757 cagagactgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtg 15073658  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgt 193  Q
         ||||||||||| || || ||||||||  |||||||||||||  ||  ||||||||||| | ||||||||||    
T  15073657 accgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagctttgtgatgttgt 15073582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 29450422 - 29450628
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||||||| || ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||      |||||     
T  29450422 tgatgataggaggcctaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaggagatgat 29450521  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| || ||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || || |||||||    
T  29450522 aggaagtgtttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcacatcagtt 29450621  T
Q  229 cacagtg 235  Q
    |||||||    
T  29450622 cacagtg 29450628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 27903776 - 27903644
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||| |||| |   |||||| |||||||| |||  | |||||||||||||| || | ||||||||||||||||||||| || || || ||    
T  27903776 tgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagagtaatgtctgcaccaaaga 27903677  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||| || ||||| ||||||||||||||    
T  27903676 tgagaagaagtgtttcagatgtggtcagaaagg 27903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 8709079 - 8708978
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||| ||| |||||||||||||||| || || || | || || |||||||||||| ||||| |||||||| || ||||| ||||||||||||||||||    
T  8709079 gaagcaaagattgaatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtt 8708980  T
Q  114 tg 115  Q
    ||    
T  8708979 tg 8708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 13879509 - 13879290
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || || |||| || | || ||||||| |||||||||||||| || ||||| ||||||||||||||||| ||    
T  13879509 agcaaagattgaatgatgagaggagacctaagagaagagatgtttctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtatg 13879410  T
Q  116 tactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagag 215  Q
     | | | || |||||||| |||||| | |||||  |||| || || ||  ||  ||| |||||||||||| || |||| || | ||| ||  |||||||     
T  13879409 caatgatgaggagaagaagtgcttccgatgtggaaagaagggccatacgatagctgaatgcaagcgtggtcatattgtttgcttcaattgtgacgaagaa 13879310  T
Q  216 ggccatatcagttcacagtg 235  Q
    || ||| |||||||||||||    
T  13879309 ggtcatctcagttcacagtg 13879290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 18224125 - 18224185
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || ||||||||||||||| |||||||||||    
T  18224125 tgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgt 18224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 14697502 - 14697401
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| ||||||||||||||||||| |  | || || |||| |||||||||| ||||| || |  || || ||||||||||| |||||||||| ||    
T  14697502 aagcaaagattgaatgatgagaggaggcctagaaagaaagatgctactgctgagattgtttgctatacttgtggtgagaaaggccataagagtaatgctt 14697403  T
Q  115 gt 116  Q
    ||    
T  14697402 gt 14697401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 13513710 - 13513650
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| || |||| ||| || || ||||||||||||||||| |||||||||    
T  13513710 tgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 13513650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 114; Significance: 7e-58; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 39207 - 39448
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||    
T  39207 aagcagaggctgaatgatgagaggaggcccaagaggagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgttt 39306  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||| ||||||||||| |||||||||||||||||||||||||||||  ||  | |||| ||||| || |||||||| || || |||||||| || ||    
T  39307 gtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgagga 39406  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || | ||||||||| ||||| ||||   |||||||||||||    
T  39407 aggtcgtatcagttcgcagtgtacacaatcgaagaaggttag 39448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 180754 - 180852
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaa 154  Q
    |||||||| |||| | ||||||||||| || || | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || ||||||||    
T  180754 tgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 180852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 14813 - 14753
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| |||||| || ||||| |||||||||||||||||||||    
T  14813 tgctcctgcggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgt 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 20832843 - 20833084
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||| || ||||| |||||||| || |||||||||||||||||||||||||    
T  20832843 aagcagaggctgaatgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgttt 20832942  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||| |||  |||||||||| | || |||||||| ||||| |||||||| || ||    
T  20832943 gtactaaagatgagaagaattgtttcaggtgtggtcagaaaggacacacactagctgattgcaagaggggagatgttgtttgttataactgcaatgagga 20833042  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || || |||||||| ||||| || |  |||| |||||||||    
T  20833043 aggtcacatcagttcgcagtgtacgcaaccgaggaaggttag 20833084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 24096568 - 24096801
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| |||||| || || ||||||||||||||||||| ||||  ||  ||    
T  24096568 tgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtggtagaga 24096667  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| ||| || || ||||||||||||||||||||||| |||  ||| || |||||||| ||  |||| || ||||||||||||||||| || ||||||    
T  24096668 tgagaggaagtgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggggacattgtttgctacaactgcaacgaagaaggtcatatc 24096767  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||||||||| || | ||||||||||| |||||    
T  24096768 agttcacagtgtactcagccgaagaaggctagaa 24096801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 21738979 - 21739220
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || |||||||||||||||||||||||||    
T  21738979 aagcagagattgaatgatgagaggaggcctaagaggagaggtgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgttt 21739078  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  |   ||||||||||| ||||| |||||||||||||||||||||||| || ||||||| |||||||| |||||| | || |||||||  || |||||    
T  21739079 gtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacaccttagttgattgtaagcgtggggatgttttttgctacaactataatgaaga 21739178  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||||||||| ||||| ||   ||| |||||||||||    
T  21739179 aggtcatatcagttcgcagtgtacggagcctaagaaggttag 21739220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 21742495 - 21742736
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || ||||||||||||||||||||||| |    
T  21742495 aagcagagactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtat 21742594  T
Q  115 gt-actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    || ||  | ||||||||||| ||||| |||||||||||||||||||||||  |   ||||||||||||||| |||||||| || |||||||| || || |    
T  21742595 gtgaccga-gatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatgttgtttgctacaactgtaatgagg 21742693  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | || ||||| ||||| ||||| || | ||| |||||||||||    
T  21742694 aaggacatattagttcgcagtgtacgcagcctaagaaggttag 21742736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 21961464 - 21961231
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||| ||||| ||||||| ||||||| ||||||| |||||||||||||| || || |||||||||||||| |||||||||  ||| ||    
T  21961464 tgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaaga 21961365  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| ||| |||||||||||||||||||| |||||||   ||  ||| || |||||||| ||| |||| || ||||||||||| | |||||| ||||||    
T  21961364 tgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatatc 21961265  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    ||||| |||||  |   |||||||||||||||||    
T  21961264 agttcgcagtgccctgagccgaagaaggttagaa 21961231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 20297816 - 20297610
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||  ||| ||||||    
T  20297816 tgatgacaggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggtaaagatgag 20297717  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| ||||||||||||||| |||| || |||| ||||  ||| ||||||||||| ||  |||| || ||||||||||| | ||| || ||||| ||||    
T  20297716 aggaagtgcttcaggtgtggttagaagggtcacagcctagctgaatgcaagcgtggggacattgtctgctacaactgcaatggagaaggtcatattagtt 20297617  T
Q  229 cacagtg 235  Q
    || ||||    
T  20297616 catagtg 20297610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 22015700 - 22015929
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||||||||||||| || | ||||| ||||||| |  | || ||||| | |||||| ||||| |||||||| || ||||||||||||  ||  ||||    
T  22015700 aatgatgagaggaggccaaagaagagagatgctcctacaaatattgtttgattcaagtgtggagaaaaaggccaaaaaagtaatgtttgtgatagagatg 22015799  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||| ||||| ||||||||||| || |  ||||| ||    
T  22015800 agaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcgtggggatgttgtttgttataactgcaacgaggaagatcatattag 22015899  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||  ||||| || | |||||||||||||||    
T  22015900 tttgcagtgtacgcagccgaagaaggttag 22015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 19857721 - 19857481
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||  ||||||||||||||||||| || ||||||| |||| || | ||||| ||||| | |||||| || || |||||||||||||||||||| |    
T  19857721 aagcagaggttgaatgatgagaggaggcctaagaggagagatgcttctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtct 19857622  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||| || ||  |||| ||||| |||| ||| || ||    
T  19857621 gtgatagagatgagaagaaatgcttcaggtgtggtcagaaaggacacacactagctgattgtaagcggggagacattgtttgttataactacaatgagga 19857522  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggtta 255  Q
     || ||||| ||||| ||||| || |  |||||||||||||    
T  19857521 aggtcatattagttcgcagtgtactcaaccgaagaaggtta 19857481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 20074666 - 20074895
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||||||  || ||||||| ||||||  ||||||| || ||||||||||| || ||||||||||||||||| |||||||||| ||| ||||||    
T  20074666 tgatgacaggaggcttaagaggagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagtaaagatgag 20074765  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || |||| | |   ||| ||||||||||| ||| |||| || ||||||||||| | |||||| ||||||| ||    
T  20074766 aggaagtgcttcaggtgtggtcagaagggtcacagcttggctgaatgcaagcgtggggatattgtctgctacaactgcaatggagagggtcatatcaatt 20074865  T
Q  229 cacagtgaacacggccgaagaaggttagaa 258  Q
    | |||||  |   |||||||||||||||||    
T  20074866 cgcagtgtcctgagccgaagaaggttagaa 20074895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 31536940 - 31537160
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||  |||||||||| ||||| ||||| ||||||| ||||||| ||||||| |||||||| ||||| || ||||||||||||||||| |||||||    
T  31536940 aagcagaggatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgttt 31537039  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||| |  ||||||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  ||    
T  31537040 gtggtagagatgatagaaaatgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatgggga 31537139  T
Q  215 gggccatatcagttcacagtg 235  Q
     |||||||| |||||||||||    
T  31537140 aggccatattagttcacagtg 31537160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 232
Target Start/End: Complemental strand, 52989178 - 52988971
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || || |||||||||||||| |||||||||  ||| ||    
T  52989178 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaaga 52989079  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| ||| || ||||||||||||||||| || ||||   ||  ||| || |||||||| ||  |||| || ||||||||||| | |||||| ||||||    
T  52989078 tgagaggaagtgtttcaggtgtggtcagaagggtcacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcatatc 52988979  T
Q  225 agttcaca 232  Q
    ||||||||    
T  52988978 agttcaca 52988971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 38909783 - 38909989
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  38909783 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 38909882  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  38909883 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 38909982  T
Q  229 cacagtg 235  Q
    |||||||    
T  38909983 cacagtg 38909989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 48426306 - 48426100
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  48426306 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 48426207  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  48426206 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 48426107  T
Q  229 cacagtg 235  Q
    |||||||    
T  48426106 cacagtg 48426100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 37680482 - 37680276
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| | |||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  37680482 tgatgataggaggcccaagaggagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 37680383  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||| ||||| | ||| || ||||| ||||    
T  37680382 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagtt 37680283  T
Q  229 cacagtg 235  Q
    |||||||    
T  37680282 cacagtg 37680276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 18273213 - 18273114
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || || |||| || |||| ||||||| |||||||||||||| || ||||| ||||||||||||||||||||    
T  18273213 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 18273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 21228540 - 21228600
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || |||||||||||||||||||||||||||    
T  21228540 tgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 21228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 20853713 - 20853842
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    ||||||||||||||  ||| ||  |||||  |||||||| |||  | ||||||||||| || || | ||| |||||||||||||||| ||| ||  | ||    
T  20853713 tgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacccaaga 20853812  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaa 154  Q
    |||||||||||| ||||| || ||||||||    
T  20853813 tgagaagaaatgtttcagatgcggtcagaa 20853842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 6131 - 6374
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||  ||||| |||||||  ||||| || |||||||||||||||||||| ||||    
T  6131 aagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgtcgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgttt 6230  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    |||| |||||||||||||| |||||||||||||||||||| || |||   |||  |||||| |||||||| ||| ||||||| || || || |||||| |    
T  6231 gtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgctagctgattgtaagcgtggcgatattgtatgctataattgtaacgaata 6330  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||| |||||| | ||||| ||||  | ||||||||||||||    
T  6331 gggccacatcagtactcagtgcacacaacagaagaaggttagaa 6374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 37369 - 37128
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| |||||||||||||||||||||| |||||||   ||||| |||| ||  |||| | |||||| || |||||||||||||||||||||||||    
T  37369 aagcagagattgaatgatgagaggaggcccaagaggagagacactcctactgatattttttgcttcaagtgtggcgagaaaggccacaagagtaatgttt 37270  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||| ||||||||||| |||||||||||||||||||| |||||||| |||  |||||| ||| |||| ||| |||| || || |||||||| || ||    
T  37269 gtgataaagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagtgtggggatattgtttgctataactgcaatgagga 37170  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||||||||||||||| || | |||||||||||||||    
T  37169 aggtcatatcagttcacagtgtacgcagccgaagaaggttag 37128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 5083 - 5326
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| || |||||| |||||||| |||| |  ||||||| ||||||||||||||| ||||| |||||||| || || |||||||||||||||||||| |    
T  5083 aagcaaaggctgaataatgagaggtggcctaggaggagagatgctcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtct 5182  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||||||||||||||| |||||||||||||||||||| ||||||||  ||  |||||| |||||  | |||||||| || || |||||||| || ||    
T  5183 gtgataaggatgagaagaagtgcttcaggtgtggtcagaagggacacactttagctgattgtaagcggagagatgttgtttgctataactgcaatgagga 5282  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||||||| |||| |||   ||||||||||||||||    
T  5283 gggccatatcagttcatagtgtacataaccgaagaaggttagaa 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 8895 - 9136
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||| ||||| |||| ||||| |||||||| || |||||| |||||||||||||||| |    
T  8895 aagcagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctaagattgtttgctacaagtgtggtgagaaaagccacaagagtaatgtct 8994  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||||||||||||||| |||||||||||||||||||||||||||||  ||  | |||| ||||| || |||||||| || || |||||||| || ||    
T  8995 gtgataaggatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgagga 9094  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || || |||| ||| ||||| ||||   |||||||||||||    
T  9095 aggtcaaatcaattcgcagtgtacacaaacgaagaaggttag 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 3051 - 2818
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| |||||||| ||  ||||||||||||||||||||||||||  ||| ||    
T  3051 tgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaaga 2952  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| | |||||||||||| ||||| ||||||||  ||  |||||| ||||| || ||  | || || || |||||||| || ||||||||||||    
T  2951 tgagaagaagttcttcaggtgtggacagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatc 2852  T
Q  225 agttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||||||  |||  ||||||||||||||||    
T  2851 agttcacagtgtgcacaaccgaagaaggttagaa 2818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 34755 - 34526
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||| |||| || ||||||| |||||| || ||||||||||||||||||||||| |||  ||  ||||    
T  34755 aatgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagtgtggtgagaaaggccacaagagtaatgtctgtgatagagatg 34656  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||||||||||| |||||||||||||  || ||||||| |||||||| || ||||| ||||| |||||||| || || || ||||| ||    
T  34655 agaagaagtgcttcaggtgtggttagaaaggacacacattagttgattgtaagcgtggggacgttgtttgttataactgcaatgaggaaggtcatattag 34556  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    |||  |||| || | |||||||||||||||    
T  34555 ttcgtagtgtacgcagccgaagaaggttag 34526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 6223 - 5994
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||| | |||| || ||||| | |||||| || || |||||||||||||||||||| |||  ||  ||||    
T  6223 aatgatgagaggaggcccaagaggagagatgctcttactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatg 6124  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||| |||||||||||||||||||| |||  ||||||||||||||| ||  |||| ||||| ||||||||||| || || ||||| ||    
T  6123 agaagaagtgcttcagatgtggtcagaaaggacacacactagctgattgcaagcgtggggacattgtttgttataactgcaacgaggaaggacatattag 6024  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||||||||| ||||  ||||||||||||||    
T  6023 ttcacagtgtacacaaccgaagaaggttag 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 256
Target Start/End: Complemental strand, 5473 - 5242
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| ||||| |||||||| || ||||||||||||| ||||||||| |||  ||| ||    
T  5473 tgaatgatgagaggaggcccacgaggagagatgctcctgctgagattgtttgctacaagtgcggcgagaaaggccacaggagtaatgtctgtgataaaga 5374  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| ||||||||||||||| |||||||||||||  ||  | |||| ||||| || || ||||| ||||| |||||||| || || || ||||||    
T  5373 tgagaagaagtgcttcaggtgtggttagaaaggacacacattagctaattgtaagcggggagacgttgtttgttataactgcaatgaggaaggtcatatc 5274  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    ||||| ||||| || |  ||||||||||||||    
T  5273 agttcgcagtgtactcaaccgaagaaggttag 5242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 23077968 - 23078195
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||| || |||| |||||| || || ||||||||||| || |||| ||||  ||  ||    
T  23077968 tgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtatgtttcaagtgtggtgaaaaaggccacaaaagcaatgcttgtggtagaga 23078067  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| |||||| ||||||||||||||||||||||||||||||  ||| || |||||||| ||  |||| || ||||||||||||||||| || ||||||    
T  23078068 tgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgtttgctacaactgcaacgaagaaggtcatatc 23078167  T
Q  225 agttcacagtgaacacggccgaagaagg 252  Q
    |||||| |||| || | |||||||||||    
T  23078168 agttcatagtgtactcagccgaagaagg 23078195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 17266387 - 17266629
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||| | ||||||||||||||| || ||||  ||||| || |||||||| ||||||||||| ||||    
T  17266387 aagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgttttaagtgtggcgagaaaggtcacaagagtaacgttt 17266486  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||||  ||||||||||||| |||||||||||||| ||||| || ||||  |||   ||||||||||| |||||||||||||| || || || || |||||    
T  17266487 gtaccgaggatgagaagaagtgcttcaggtgtggacagaagggtcacatgctagccgattgcaagcgcggtgatgttgtatgctataattgtaatgaaga 17266586  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttaga 257  Q
    ||| || |||||| | ||||| |||| ||||||||||||||||    
T  17266587 gggtcacatcagtactcagtgcacacagccgaagaaggttaga 17266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 20345583 - 20345377
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||  ||| |||||     
T  20345583 tgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgtttgtggtaaagatgat 20345484  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||  ||| |||| ||||||||||| ||  |||| || ||||||||||| |  || || ||||| ||||    
T  20345483 aggaagtgcttcaggtgtggtcagaagggtcacagtctagttgaatgcaagcgtggggacattgtctgctacaactgcaatggggaaggtcatattagtt 20345384  T
Q  229 cacagtg 235  Q
    |||||||    
T  20345383 cacagtg 20345377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 22505984 - 22505774
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || ||||||||||||||||| |||||||||  ||| ||    
T  22505984 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaaga 22505885  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
     |||| ||| |||||||||||||||||||  ||||| | | ||  ||| || |||||||| ||  |||| || ||||||||||| | |||||| || |||    
T  22505884 cgagaggaagtgcttcaggtgtggtcagatgggacatagcttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcacatc 22505785  T
Q  225 agttcacagtg 235  Q
    |||||||||||    
T  22505784 agttcacagtg 22505774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 25851373 - 25851167
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| ||||| || |||||| ||||| |||||||| || |||||||||||||||||||||||||||  ||| |||||     
T  25851373 tgatgataggaggcccaagaggagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgat 25851274  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||  |||  ||| | ||||||||| ||  |||| || ||||||||||| | |||||| ||||| ||||    
T  25851273 aggaagtgcttcaggtgtggtcagaagggtcacagtctagctgaatacaagcgtggagacattgtctgctacaactgcaatggagagggtcatattagtt 25851174  T
Q  229 cacagtg 235  Q
    |||||||    
T  25851173 cacagtg 25851167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 23563237 - 23563462
Alignment:
Q  31 atgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaa 130  Q
    |||||||||||||||| ||||||| ||||||| |||| || ||||| | |||||| || || |||||||||||||||||||| |||  ||  ||||||||    
T  23563237 atgagaggaggcccaagaggagagatgctcctactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaa 23563336  T
Q  131 gaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttca 230  Q
    ||| ||||||||||||||||||||||||||||| |||  ||| || ||| |||| ||   ||| ||||| |||||||| || || || ||||| |||||     
T  23563337 gaagtgcttcaggtgtggtcagaaaggacacacactagctgactgtaagggtggagacaatgtttgttataactgcaatgaggaaggtcatattagttcg 23563436  T
Q  231 cagtgaacacggccgaagaaggttag 256  Q
    ||||| || | |||||||||||||||    
T  23563437 cagtgtacgcagccgaagaaggttag 23563462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 14884058 - 14884264
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||| |||||||| |||||||||||||| || ||||||||||||||||||||||| |||   |  |||||     
T  14884058 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctgtgggagagatgat 14884157  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   |   ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||| ||||    
T  14884158 aggaagtgcttcaggtgtggtcagaagggtcacagtttggctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatattagtt 14884257  T
Q  229 cacagtg 235  Q
    |||||||    
T  14884258 cacagtg 14884264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 16258092 - 16258272
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||| |    
T  16258092 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 16258191  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtt 198  Q
     |   || |||||||| |||||| | |||||  ||||||| || ||  ||  ||| ||||||||||||||| |||| ||||    
T  16258192 atggtgaggagaagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtt 16258272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 23669946 - 23669847
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || ||||||| ||||||||||||||| ||||  ||| |||| || ||||||||||||||||||||||||||    
T  23669946 agcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgtttcctaccagtgtggtgagaaaggccacaagagtaatgtttg 23669847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 22591811 - 22591908
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| ||||||||||||||||||||    
T  22591811 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 22595366 - 22595463
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||||| ||| |||||||||||| || || ||||||| || |||||||||||| ||||| |||||||| || ||||| ||||||||||||||||||||    
T  22595366 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22595463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 21870331 - 21870432
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| | ||||||||| ||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || ||||||| |||||||||||||||||    
T  21870331 aagcagaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgttt 21870430  T
Q  115 gt 116  Q
    ||    
T  21870431 gt 21870432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 21874611 - 21874712
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| | ||||||||| ||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || ||||||| |||||||||||||||||    
T  21874611 aagcagaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgttt 21874710  T
Q  115 gt 116  Q
    ||    
T  21874711 gt 21874712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 43122781 - 43122541
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||| ||| |||||||||||||||| || || ||||||| || || ||| ||||| ||||| |||||||| || ||||  ||||||||||||||||| ||    
T  43122781 agcaaagattgaatgatgagaggagacctaagaggagagatgttcatgcagagattgtttgctacaagtgtggcgagaggggccacaagagtaatgtctg 43122682  T
Q  116 tactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagag 215  Q
     | |   || |||||||| |||||| | |||||  |||| || ||  |  ||  ||| ||||||||||||||| |||| || | ||| ||  |||||||     
T  43122681 caatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaa 43122582  T
Q  216 ggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    || ||| ||||||||||||| |||| ||| |||||||||||    
T  43122581 ggacatctcagttcacagtgtacacagcctaagaaggttag 43122541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 21983229 - 21983328
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||| ||| |||||||||||||||| || || || |||| || |||||||||||| ||||| || | ||| || ||||| ||||||||||||||||||    
T  21983229 gaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgctataggtgtggtgagaagggccacaagagtaatgtt 21983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 20824711 - 20824626
Alignment:
Q  72 gtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||||| || || | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || |||||||||||    
T  20824711 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaagg 20824626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 28892052 - 28892137
Alignment:
Q  72 gtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagg 157  Q
    ||||||||||| || || | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || |||||||||||    
T  28892052 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaagg 28892137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 18782406 - 18782346
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || |||||||||||||||||||||||||||    
T  18782406 tgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 18782346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 21561088 - 21561176
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||||||||||||| || || || |||| || |||||||||||| ||||| | |||||| ||  |||| ||||||||||||||||||    
T  21561088 tgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgcttcaagtgtggtaagaagggccacaagagtaatgtt 21561176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 20779171 - 20779089
Alignment:
Q  72 gtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaa 154  Q
    ||||||||||| || || | ||| |||||||||||||||| ||| ||  | |||||||||||||| ||||| || ||||||||    
T  20779171 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaa 20779089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 20803889 - 20803797
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtgg 148  Q
    ||||||||| ||||| || |||| ||| |  || ||||||||||||||||| ||||||||  || |||| | ||||||||| ||| |||||||    
T  20803889 tgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagaaatgtttgccctgaggaggtgaagaaatgtttctggtgtgg 20803797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 5610 - 5391
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||||||||| || ||||||| ||||||| |||| || ||||||| |||||| || || ||||||||||||||||||||||    
T  5610 aagcagagattgaatgatgagaggaggcc-aagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgttt 5512  T
Q  115 gt-actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    || ||  || |||||||||| |||||||||||||||||||||||||||||  ||  |||||| |||||||| |||||||| || |||||||| || ||||    
T  5511 gtgaccgag-atgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctacaactgtaatgaag 5413  T
Q  214 agggccatatcagttcacagtg 235  Q
    | || ||||||||||| |||||    
T  5412 aaggtcatatcagttcgcagtg 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 1188 - 1426
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||  |||||| |||||| || || ||||||||||||||||||| ||||     
T  1188 cagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtg 1287  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     ||  ||||||||||| |||||||||||||||||||||||||||||  ||  ||| || |||||||| ||| |||| || ||||  ||||| || || ||    
T  1288 atagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtggggatattgtttgctacacttgcaatgaggaagg 1387  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     ||||||||||| ||||| || | ||| |||||||||||    
T  1388 tcatatcagttcgcagtgtactcagcctaagaaggttag 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 688 - 930
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||||||  | |||||||||||||||||||| ||||||| ||||||| | || || | ||| | |||||| || || |||||||||||||||||||||    
T  688 gaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctacggacattgattgcttcaagtgtggtgaaaaaggccacaagagtaatgtt 787  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    |||  ||  ||||||||||| |||||||||||||||||||| |||||||| |||  |||||| |||||||| ||  |||| ||||| ||||||||||| |    
T  788 tgtgatagagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagcgtggggacattgtttgttataactgcaacgagg 887  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | || ||||||||||| ||||| || | ||| |||||||||||    
T  888 aaggacatatcagttcgcagtgtacgcagccaaagaaggttag 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 8171 - 7933
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||  |||||| |||||| || || ||||||||||||||||||| ||||     
T  8171 cagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtg 8072  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     ||  ||||||||||| |||||||||||||||||||||||||||||  ||  ||| || |||||||| ||| |||| || ||||  ||||| || || ||    
T  8071 atagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtggggatattgtttgctacacttgcaatgaggaagg 7972  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     ||||||||||| ||||| || | ||| |||||||||||    
T  7971 tcatatcagttcgcagtgtactcagcctaagaaggttag 7933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 17067 - 16826
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||| ||||||||||||||||||||| || ||||||| ||||||| |||||||  |||||| |||||| |||||||||||||||||||||||||| |    
T  17067 aagcagaaactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaagtgtggagagaaaggccacaagagtaatgtgt 16968  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  |   ||||||||||| ||||| |||||||||||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || || ||    
T  16967 gtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgagga 16868  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||| ||||| ||||| || | | | |||||||||||    
T  16867 aggacatattagttcgcagtgtacgcagactaagaaggttag 16826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 256
Target Start/End: Complemental strand, 50524 - 50294
Alignment:
Q  26 gaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt-actaagga 124  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| || ||||||| |||||| || || |||| ||||||||||||||||||| ||  || |    
T  50524 gaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagaccacaagagtaatgtttgtgaccgag-a 50426  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| || ||||||||||||||||||||||||||| ||  |||||| |||||||| ||| |||| || ||||||||||| || || || ||||||    
T  50425 tgagaagaagtgtttcaggtgtggtcagaaaggacacaccttagctgattgtaagcgtggggatattgtttgctacaactgcaatgaggaaggtcatatc 50326  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    |||||  |||| || | ||| |||||||||||    
T  50325 agttcgtagtgtacccagcctaagaaggttag 50294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 1495 - 1701
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || |||||||| ||||||||||||||||||  ||| ||||||    
T  1495 tgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggacacaagagtaatgtttgtggtaaagatgag 1594  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| |||||||   ||  ||| ||||||||||| ||  || | || ||||||||||| | |||||| ||||||||||    
T  1595 aggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgcaagcgtggggacattatctgctacaactgcaatggagagggtcatatcagtt 1694  T
Q  229 cacagtg 235  Q
    |||||||    
T  1695 cacagtg 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 4339 - 4501
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||| |||| || ||||| | |||||| || ||||||||||| |||||||||||||||  ||  ||||    
T  4339 aatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgcttcaagtgtggcgagaaaggccaaaagagtaatgtttgtgatagagatg 4438  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatg 189  Q
    |||||||||||||||||||||||||||||||||||||  ||  |||||| |||||||||||||    
T  4439 agaagaaatgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtggtgatg 4501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 16984 - 17148
Alignment:
Q  59 tcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaagga 158  Q
    ||||||||||||   ||||| ||| || || ||||||||||||||||| | ||||||| |  |||| | ||||||||| ||| |||||||  |||| ||     
T  16984 tcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagcactgtttgtccagaggaggtgaagaaatgtttctggtgtggcaagaagggt 17083  T
Q  159 cacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    |||||  ||  ||| ||||||| ||||||| | || |||| ||||||||| |||||||| |||||    
T  17084 cacacattagctgactgcaagcatggtgatatcgtgtgtttcaactgcaaagaagagggtcatat 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 514237 - 514447
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || ||||||||||||||||| |||||||||  ||| ||    
T  514237 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaaga 514336  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
     |||| ||| |||||||||||||||||||| ||||||| | ||  ||| || ||| |||| ||  |||| || ||||||||||| | |||||| ||||||    
T  514337 cgagaggaagtgcttcaggtgtggtcagaagggacacagcttaactgaatgtaagtgtggggacattgtctgctacaactgcaatggagagggtcatatc 514436  T
Q  225 agttcacagtg 235  Q
    |||||||||||    
T  514437 agttcacagtg 514447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 769 - 998
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| ||||||| ||||||| | ||||| ||||| | |||||| || || ||||||||||||||||| ||||||  ||  ||||    
T  769 aatgatgagaggaggcccaagaggagagatgctcctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaacgtttgtgatagagatg 868  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| |||||||||||||||||||||||| |||| |||  |||||| |||||||| ||  |||| | ||| |||||||| || || || ||||||||    
T  869 agaagaagtgcttcaggtgtggtcagaaaggatacactctagctgattgtaagcgtggggacattgtttattataactgcaatgaggaaggtcatatcag 968  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| ||||| || |  ||||||||||||||    
T  969 ttcgcagtgtacgcaaccgaagaaggttag 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 258
Target Start/End: Original strand, 1729 - 1965
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||||| ||  |||| || ||||| || |||||||||||||| |||||||||||||| ||    
T  1729 gactgaatgatgagagaaggcccaagaggagagatgctactgctgaaataatttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaa 1828  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccat 221  Q
     ||||||||||| |||||||||||||||||||||||||||||  |   | | |||||| | ||||||||||| ||||| || ||  | || ||||||||     
T  1829 agatgagaagaagtgcttcaggtgtggtcagaaaggacacacattggctaactgcaagaggggtgatgttgtttgttataattgtgatgaggagggccac 1928  T
Q  222 atcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |||||||| ||||| || | ||| |||||| ||||||    
T  1929 atcagttcccagtgcactcagccaaagaagattagaa 1965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 746 - 961
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||   || || ||||| | |||||| || || |||||||||||||||||||| |    
T  746 aagcagcgactgaatgatgagaggaggcccaagaggagagatgctcctatggatattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtct 845  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  ||  ||||||||||| ||||||| ||||||||||||||||||||| |||  |||||| |||||||||||  |||| || || ||||||||||| ||    
T  846 gtgatagagatgagaagaagtgcttcatgtgtggtcagaaaggacacacactagctgattgtaagcgtggtgacattgtttgctataactgcaacgagga 945  T
Q  215 gggccatatcagttca 230  Q
     || || |||||||||    
T  946 aggtcacatcagttca 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 252
Target Start/End: Complemental strand, 11397 - 11170
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||| || || ||||||| ||||||| ||||||| |||||||||||||| || || |||||||||||||| |||| ||||  ||  ||    
T  11397 tgaatgatgataggagtcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagaga 11298  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| ||| |||||||||||||||||||| |||||| | |||  ||| || |||||||| ||  |||| || ||||||||||| |||||||| ||||||    
T  11297 tgagaggaagtgcttcaggtgtggtcagaagggacacgcactagctgaatgtaagcgtggggacattgtctgctacaactgcaatgaagagggtcatatc 11198  T
Q  225 agttcacagtgaacacggccgaagaagg 252  Q
    || |||||||| || | |||||||||||    
T  11197 agctcacagtgtactcagccgaagaagg 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 5018 - 5256
Alignment:
Q  14 gaagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtt 113  Q
    |||||||||  |||||||||| ||||||||||| ||||||| |||||||||||| || |||||||| ||| | |  || ||||||||||| |  |||| |    
T  5018 gaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttaaaagagtgatgaaaaaggccacaaaaacaatgct 5117  T
Q  114 tgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    |||  ||   |||||| |||||| ||||||||||||||||||||||||||||||  ||| || |||||||| ||  |||| || ||||||||||||||||    
T  5118 tgtggtagaaatgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgtctgctacaactgcaacgaag 5217  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaagg 252  Q
    | || |||||||||||| |||| || | |||||||||||    
T  5218 aaggtcatatcagttcatagtgtactcagccgaagaagg 5256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 63393 - 63634
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| |||||||||||||||||||||| ||||||| ||||||| |||| || ||||||| |||||| || || ||||||||||||||||||||||    
T  63393 aagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggccacaagagtaatgttt 63492  T
Q  115 gt-actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaag 213  Q
    || ||  | ||||||||||| || ||||||||||||||||||||||||||  ||  |||||| |||| ||| ||| |||| || |||||||  || || |    
T  63493 gtgaccga-gatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagctgattgtaagcatggggatattgtttgctacaactataatgagg 63591  T
Q  214 agggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | || ||||||||||| ||||| || | ||| |||||||||||    
T  63592 aaggtcatatcagttcgcagtgtacgcagcctaagaaggttag 63634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 5870 - 5629
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||||||||  || ||||||| ||||||| |||||||  |||| | |||||| || |||||||||||||||||||| || |    
T  5870 aagcagagattgaatgatgagaggaggcttaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggccacaagagtaacgtgt 5771  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||  |   ||||||||||| ||||| |||||||||||||||||||||||  ||  |||||| |||||||| |||||||| || ||||| || || |||||    
T  5770 gtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctacaattgtaatgaaga 5671  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||||||||| ||||| || |  || |||||||||||    
T  5670 aggtcatatcagttcgcagtgtacgcaacctaagaaggttag 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 11631 - 11837
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||| |||||| ||||||| ||| || | |||||| || || |||||||| ||  |||||||||||||||||||||| |||   |  |||||     
T  11631 tgatgataggaagcccaagaggagagatgcaccagatgagattgtatgatacaagtgtggtaagaaaggccacaagagtaatgtatgtggaagagatgat 11730  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  |||  |||||||||| ||  |||| |||||||||||||| | ||| || ||||| |||     
T  11731 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaaagcaagcgtggggacattgtctgttacaactgcaatggagaaggtcatattagta 11830  T
Q  229 cacagtg 235  Q
    |||||||    
T  11831 cacagtg 11837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 1371 - 1599
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||| || ||||||||||| || || |||||||||||||| |||| ||||  ||  ||    
T  1371 tgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagaga 1470  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    || || |||||| || ||||||||| |||| ||||||||||||  ||| || ||| |||| ||  |||| || ||||||||||| ||||| || ||||||    
T  1471 tgtgaggaaatgttttaggtgtggttagaagggacacaccctagctgaatgtaagtgtggggacattgtttgctacaactgcaatgaagaaggtcatatc 1570  T
Q  225 agttcacagtgaacacggccgaagaaggt 253  Q
    ||||| ||||| || | ||||||||||||    
T  1571 agttcgcagtgtactcagccgaagaaggt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 428 - 567
Alignment:
Q  24 ctgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagg 123  Q
    |||||||||||||| || ||||| ||||||| ||||||| ||||||| ||||| |  ||||| || |||||||||||||| |||||||||||||| || |    
T  428 ctgaatgatgagagaagacccaagaggagagatgctcctactgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaag 527  T
Q  124 atgagaagaaatgcttcaggtgtggtcagaaaggacacac 163  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  528 atgagaagaagtgcttcaggtgtggtcagaaaggacacac 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 62646 - 62887
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||||||||| || ||||||| ||||||| |||| || ||||  | |||||| || ||||||||||||||||||||||| |    
T  62646 aagcagagattgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttaattcaagtgtggtgagaaaggccacaagagtaatgtat 62745  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaaga 214  Q
    ||    | ||||||||||| ||||| |||||||||||||||| ||||||  ||  |||||| |||||||| |||||||| |  |||||||| || ||| |    
T  62746 gtgaccatgatgagaagaagtgctttaggtgtggtcagaaagtacacactttagctgattgtaagcgtggggatgttgttttctacaactgtaatgaata 62845  T
Q  215 gggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
     || ||||||||||| ||||| || | ||| ||||| |||||    
T  62846 aggtcatatcagttcgcagtgtacgcagcctaagaaagttag 62887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 256
Target Start/End: Original strand, 65213 - 65413
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaa 155  Q
    ||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||    
T  65213 tgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcagaaa 65312  T
Q  156 ggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaaggtta 255  Q
    ||||||||  |   | |||| ||| | || |||||||| ||||| || ||  | || || ||||| |||||||||||||| || | ||| ||||||||||    
T  65313 ggacacacgttggctaattgtaagagaggagatgttgtttgttataattgtgatgaggaaggccacatcagttcacagtgcacccagccaaagaaggtta 65412  T
Q  256 g 256  Q
    |    
T  65413 g 65413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 934 - 799
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||| ||||| |||||||| ||  |||||||||||||||||||||| |    
T  934 aagcagagattgaatgatgagaggaggcctaagaggagagatgctcctgctgagattgtttgctacaagtgtggctagaaaggccacaagagtaatgtct 835  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtc 150  Q
    ||  ||| ||||||||||| | ||||||||||||||    
T  834 gtgataaagatgagaagaagtacttcaggtgtggtc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 42151 - 41945
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  |||||     
T  42151 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 42052  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||||||||| |  || || ||||||||||    
T  42051 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatcagtt 41952  T
Q  229 cacagtg 235  Q
    |||||||    
T  41951 cacagtg 41945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 170 - 399
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    |||||||||||||||||||| || ||||  |||||| |||| || ||||| | |||||| || ||||||||||||||||||||||| |||  ||  ||||    
T  170 aatgatgagaggaggcccaagagcagagaggctcctactgatattgtttgcttcaagtgtggcgagaaaggccacaagagtaatgtctgtgatagagatg 269  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcag 226  Q
    ||||||| ||||||| ||||||||||||| ||||||| |||  |||||| |||||||| ||  |||| ||||| |||||||| || || || ||||| ||    
T  270 agaagaagtgcttcatgtgtggtcagaaaagacacacactagctgattgtaagcgtggggacattgtttgttataactgcaatgaggaaggtcatattag 369  T
Q  227 ttcacagtgaacacggccgaagaaggttag 256  Q
    ||| || || || |  ||||||||||||||    
T  370 ttcgcaatgtacgcaaccgaagaaggttag 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 153922 - 153753
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||  ||||||| ||||| | |||||| || || ||| |||| ||||||||||| |    
T  153922 aagcagcgactgaatgatgagaggaggcccaagaggagagatgctcccactgagattgtttgcttcaagtgtggtgaaaaaagccataagagtaatgtct 153823  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtgg 184  Q
    ||  ||  ||||||||||| |||||||||||||||||||||||||||||  ||  |||||| ||||||||    
T  153822 gtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtgg 153753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 248
Target Start/End: Complemental strand, 252039 - 251816
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||||||||| ||||||| ||||| || |||||| || |||| |||||| || || ||||||||||| ||  ||| ||||  ||  ||    
T  252039 tgaatgatgataggaggcccaagaggagagatgctcttgttgagattgtgtgtttcaagtgtggtgaaaaaggccacaaaagctatgcttgtggtagaga 251940  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| |||||| || ||||||||||||||||||||||| |||  ||| || |||||||| ||  |||| || || |||||||||||||| || ||||||    
T  251939 tgagaggaaatgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggagacattgtttgctaaaactgcaacgaagaaggtcatatc 251840  T
Q  225 agttcacagtgaacacggccgaag 248  Q
    ||||||||||| || | |||||||    
T  251839 agttcacagtgtactcagccgaag 251816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 229767 - 229827
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || ||||||||||||||||| |||||||||    
T  229767 tgctcctgcggagattgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 229827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 877 - 671
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||| || || |||||||||||||| |||||||||  ||| ||||||    
T  877 tgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgag 778  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagtt 228  Q
    | ||| ||||||||||| |||||||| || ||||   ||  ||| || |||||||| ||  |||| || ||||||||||| | |||||| ||||| ||||    
T  777 aggaagtgcttcaggtgcggtcagaagggtcacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcatataagtt 678  T
Q  229 cacagtg 235  Q
    |||||||    
T  677 cacagtg 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 115985 - 115751
Alignment:
Q  22 gactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaa 121  Q
    |||||||||||||||| ||||||||  | ||||   |||||||||| || ||||| |  ||||| || |||||||||||||| |||||||||||||| ||    
T  115985 gactgaatgatgagagaaggcccaagggaagagacactcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaa 115886  T
Q  122 ggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccat 221  Q
     ||||||||||| |||||||||||||| ||||| || |||    ||  ||||||||||||||||||| | ||||| || || ||||| |  ||||| |||    
T  115885 agatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaagcgtggtgatatagtatgctataattgcaatggggagggtcat 115786  T
Q  222 atcagttcacagtgaacacggccgaagaaggttag 256  Q
    |||||||| ||||| || |  ||||||||||||||    
T  115785 atcagttctcagtgcactcaaccgaagaaggttag 115751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 93809 - 93910
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaa 155  Q
    |||||||| |||| | ||||||||||| || || | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || |||||||||    
T  93809 tgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaa 93908  T
Q  156 gg 157  Q
    ||    
T  93909 gg 93910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 52078 - 51842
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| |||||||||||||||||||| |  ||||||| ||||||| |||||||  | |||| |||||| || ||||||||||||||||||||||| |||     
T  52078 cagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattatctgtttcaagtgtggtgagaaaggccacaagagtaatgtatgtg 51979  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagaggg 217  Q
     |   ||||||||||| ||||| ||||||||| |||||||||||||  ||  | ||||||||| |||||||||||| |  || |||||  | ||||| ||    
T  51978 atcgagatgagaagaagtgctttaggtgtggtaagaaaggacacactttagcttattgcaagcatggtgatgttgttttctataactgtgatgaagaagg 51879  T
Q  218 ccatatcagttcacagtgaacacggccgaagaaggtt 254  Q
      |||| ||||||||||| || | ||| |||||||||    
T  51878 taatattagttcacagtgtacgcagccaaagaaggtt 51842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 4188 - 4419
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    ||||||||||||||||||| || ||||||| ||||||| |||||||  |||| | |||||| || ||||||| | |||| |||||||| |||  |   ||    
T  4188 tgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaagactacaaaagtaatgtgtgtgatcgaga 4287  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||||||| ||||| |||||||||||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || || || || |||||     
T  4288 tgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatatt 4387  T
Q  225 agttcacagtgaacacggccgaagaaggttag 256  Q
    ||||| ||||| || | ||| |||||||||||    
T  4388 agttcgcagtgtacgcagcctaagaaggttag 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 30210 - 30437
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||| |||||||| ||||| || || |||||||||||||| |||| ||||  ||  ||    
T  30210 tgaatgatgacaggaggcccaagaggaaagatgctcctgctgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgcttgtggtagaga 30309  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    | ||| |||||| || ||||||||| ||||||||||||  |||  ||| || |||  ||| ||  ||||||| ||||||||||| ||||| || ||||||    
T  30310 taagaggaaatgttttaggtgtggtaagaaaggacacaaactagctgaatgtaagaatggggacattgtatgctacaactgcaaagaagaaggtcatatc 30409  T
Q  225 agttcacagtgaacacggccgaagaagg 252  Q
    |||||  |||| || | |||||||||||    
T  30410 agttcgaagtgtactcagccgaagaagg 30437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 70535 - 70297
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt- 116  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||| |||||||  |||| |  ||||| || ||||||||||||||||||||||| |||     
T  70535 cagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaagtgtggtgagaaaggccacaagagtaatgtgtgtg 70436  T
Q  117 actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagg 216  Q
    ||  | ||||||||||| || ||||| ||||| ||||||||||||||  |   ||||||||||||||| ||| |||| || |||||||| || || || |    
T  70435 accga-gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaag 70337  T
Q  217 gccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    | ||||| ||||| ||||| || | ||| |||||||||||    
T  70336 gacatattagttcgcagtgtacgcagcctaagaaggttag 70297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 687 - 824
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| |||||||| || ||||||| ||||||| ||||||| |||||||||||||  || ||||||||||||||||| |||||||||  ||| ||    
T  687 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgtttgtggtaaaga 786  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacaca 162  Q
     |||| ||| ||||||||||||||||| || |||||||    
T  787 cgagaggaagtgcttcaggtgtggtcaaaagggacaca 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 5776 - 5877
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| |||| || |||| ||||||||| || || ||||||||||||||||||||||    
T  5776 aagcagagactgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagtgtggtgaaaaaggccacaagagtaatgttt 5875  T
Q  115 gt 116  Q
    ||    
T  5876 gt 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 428 - 564
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatg 126  Q
    ||||||||||| |||||||| ||||||| |||||||   || || ||||||| |||||| || |||||||||||||| |||| |||||||  ||  ||||    
T  428 aatgatgagagaaggcccaagaggagagatgctcctatagatattgtttgtttcaagtgtggcgagaaaggccacaaaagtagtgtttgtgatacagatg 527  T
Q  127 agaagaaatgcttcaggtgtggtcagaaaggacacac 163  Q
    ||||||| |||||||||||||||||||||||||||||    
T  528 agaagaagtgcttcaggtgtggtcagaaaggacacac 564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 29957 - 29770
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||||||  |||||| || | || |||||| || || || |||||||||||||||||||    
T  29957 aagcagagactgaatgatgagaggaggcctaggaggagagatgctcctattgagatagtctatttcaagtgtggtgaaaagggccacaagagtaatgttt 29858  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaa 202  Q
    |||   | ||||||||||| || ||| |||||||   ||||||||||||  ||  ||| |||||||||||||||||||| || |||||    
T  29857 gtaaccatgatgagaagaagtgtttccggtgtgggacgaaaggacacacaatagctgagtgcaagcgtggtgatgttgtttgctacaa 29770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 43118 - 42980
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt-actaagg 123  Q
    ||||||||||||||||||| || ||||||| ||||||| |||||||  |||||| ||||||  | ||||||||||||||||||||||||||| ||  | |    
T  43118 tgaatgatgagaggaggcctaagaggagagatgctcctactgagataatttgtttcaagtgttgtgagaaaggccacaagagtaatgtttgtgaccga-g 43020  T
Q  124 atgagaagaaatgcttcaggtgtggtcagaaaggacacac 163  Q
    |||||||||| ||||| |||||| ||||||||||||||||    
T  43019 atgagaagaagtgctttaggtgtagtcagaaaggacacac 42980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 258
Target Start/End: Complemental strand, 30312 - 30121
Alignment:
Q  67 agatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccct 166  Q
    |||| |||||||||||||| || |||||||||||||| || || ||||||  ||  ||||||| ||| || |||||||||||||||||| |||||| |||    
T  30312 agattgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgtggtagagatgagaggaagtgattcaggtgtggtcagaaaagacacaacct 30213  T
Q  167 atttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaaggttagaa 258  Q
    |  ||| || |||||||| ||  |||| |||||||||||||| | |||||| ||||||||||| |||||  |   |||||||||||||||||    
T  30212 agctgaatgtaagcgtggggacattgtctgttacaactgcaatggagagggtcatatcagttcgcagtgtcctgagccgaagaaggttagaa 30121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 1188 - 1305
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||  ||  ||    
T  1188 tgaatgatgataggagacccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtagaga 1287  T
Q  125 tgagaagaaatgcttcag 142  Q
    ||||| ||| ||||||||    
T  1288 tgagaggaagtgcttcag 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 62; Significance: 7e-27; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 12351 - 12508
Alignment:
Q  80 caagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaag 179  Q
    |||||| || ||||||||||||||||||||||||| |  ||| ||||||||||| ||||| ||||||| |||||||||||||||  ||  |||||| |||    
T  12351 caagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaag 12450  T
Q  180 cgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaa 237  Q
    ||||| ||  |||| ||||| |||||||| || || || ||||||||||| |||||||    
T  12451 cgtggggacattgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgaa 12508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 20531 - 20688
Alignment:
Q  80 caagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaag 179  Q
    |||||| || ||||||||||||||||||||||||| |  ||| ||||||||||| ||||| ||||||| |||||||||||||||  ||  |||||| |||    
T  20531 caagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaag 20630  T
Q  180 cgtggtgatgttgtatgttacaactgcaacgaagagggccatatcagttcacagtgaa 237  Q
    ||||| ||  |||| ||||| |||||||| || || || ||||||||||| |||||||    
T  20631 cgtggggacattgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgaa 20688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12288 - 12327
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagag 54  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  12288 aagcagagactgaatgatgagagtaggcccaagaggagag 12327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 20468 - 20507
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagag 54  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  20468 aagcagagactgaatgatgagagtaggcccaagaggagag 20507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 208
Target Start/End: Original strand, 23811 - 23990
Alignment:
Q  29 tgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgag 128  Q
    |||||| ||||||||||| ||||||| |||||||| |||||| ||||| |||||||| || ||||||||||||||||||||||| |||   |  |||||     
T  23811 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgtatgtggaagagatgat 23910  T
Q  129 aagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaa 208  Q
    | ||| |||||||||||||||||||| || ||||   ||  ||| ||||||||||| ||  |||| |||||||| |||||    
T  23911 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaa 23990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 43296 - 43471
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||| |||||||||||||||||||| || ||||||| |||||||  |||||| || |||| ||||||  | || || ||||||||||||||||| |||     
T  43296 cagaggctgaatgatgagaggaggcctaagaggagagatgctcctaatgagattgtctgtttcaagtgtcgtgaaaagggccacaagagtaatgtgtgtg 43395  T
Q  118 ctaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgt 193  Q
     |   ||||||||||| ||||| |||||||| ||||||||||||||  ||  |||||| |||||||| ||||||||    
T  43396 atcgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgttgt 43471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 256
Target Start/End: Complemental strand, 13081 - 12916
Alignment:
Q  91 agaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgt 190  Q
    |||||||||||||||||||||| |||      || |||||||| ||||| |||||||||||||||||||||||  ||  |||||| |||||||| |||||    
T  13081 agaaaggccacaagagtaatgtatgtgaccgtgacgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgt 12982  T
Q  191 tgtatgttacaactgcaacgaagagggccatatcagttcacagtgaacacggccgaagaaggttag 256  Q
    ||| || |||||||| || ||||| || ||||||||||| ||||| || | ||| |||||||||||    
T  12981 tgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaagaaggttag 12916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 66992 - 67196
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    |||||||||| ||||| ||||| ||||||| ||||||| | ||||| |||||||| ||||| || || |||||||||||||| |||||||||  ||   |    
T  66992 tgaatgatgataggagacccaagaggagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtagaca 67091  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatatc 224  Q
    ||||| |||||| |||||||||||||| || ||||||| ||||  ||| || |||| ||| ||  |||| || ||||||||||| | ||| || |||||     
T  67092 tgagaggaaatgtttcaggtgtggtcaaaagggacacaacctagctgaatgtaagcttggggacattgtctgctacaactgcaatggagaaggtcatatt 67191  T
Q  225 agttc 229  Q
    |||||    
T  67192 agttc 67196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 2147 - 1970
Alignment:
Q  18 cagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt- 116  Q
    ||||| |||||||||||||||||||| || ||| ||| ||||||| |||| ||  |||| | |||||| || ||||||||||||||||||||||| |||     
T  2147 cagaggctgaatgatgagaggaggcctaagaggtgagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtg 2048  T
Q  117 actaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatg 196  Q
    ||  | ||||||||||| ||||| |||||||| ||||||||||| ||  ||  |||||| |||||||| |||||||||||    
T  2047 accga-gatgagaagaagtgctttaggtgtggacagaaaggacatactttagctgattgtaagcgtgg-gatgttgtatg 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 1104 - 1243
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||||||||| ||||||||||||||||| | || ||  | |||| |||||||||| || || |  ||||| || |||||||| ||||||||||| ||||    
T  1104 aagcagagacttaatgatgagaggaggccgagtaagaagggtgcttctgctgagatagtatgctttaagtgtggcgagaaaggtcacaagagtaacgttt 1203  T
Q  115 gtactaaggatgagaagaaatgcttcaggtgtggtcagaa 154  Q
    |||| |||||||||||||| || ||||| ||||| |||||    
T  1204 gtaccaaggatgagaagaagtgtttcagatgtggacagaa 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 6023 - 5848
Alignment:
Q  24 ctgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagg 123  Q
    |||||||||||||||||||| |  ||||||| ||| |||  |||||  || | || |||||| || ||||||||||||||||||||||| |||  |   |    
T  6023 ctgaatgatgagaggaggcctaggaggagagatgcccctaatgagactgtctatttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgattgag 5924  T
Q  124 atgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgtta 199  Q
    || ||||||| || ||||| ||||| ||||||||||||||  ||  ||||||||||||||| |||||||| |||||    
T  5923 ataagaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaagcgtggggatgttgtttgtta 5848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 116050 - 115936
Alignment:
Q  19 agagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtac 118  Q
    ||||||||||||||||||||||||| || ||||| | ||||||| |||| || ||||||| || ||| || || ||||||||||||||||||||||||      
T  116050 agagactgaatgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtttcatgtgtggtgaaaaaggccacaagagtaatgtttgtga 115951  T
Q  119 taaggatgagaagaa 133  Q
    ||  |||||||||||    
T  115950 tagagatgagaagaa 115936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 1368 - 1269
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttg 115  Q
    |||||||| |||||||||||||||| || || || || | || |||| ||||||| |||||||||||||| || ||||| ||||||||||||||||||||    
T  1368 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 7986 - 7908
Alignment:
Q  16 agcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaa 94  Q
    |||||||| |||||||||||||||| || || || || | || |||| ||||||| |||||||||||||| || |||||    
T  7986 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaa 7908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 33256 - 33337
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagag 106  Q
    |||||||||||||||||||||| ||||||| |||||||| ||| || ||||||| |||||| || || ||||||||||||||    
T  33256 tgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccacaagag 33337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 12176 - 12034
Alignment:
Q  66 gagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccc 165  Q
    ||||| ||||| |||||||| || |||||||||||||||||||||||||||   |  ||||| | ||| |||||||||||||||||||| || ||||       
T  12176 gagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtt 12077  T
Q  166 tatttgattgcaagcgtggtgatgttgtatgttacaactgcaa 208  Q
    ||  ||| ||||||||||| ||  || | ||||||||||||||    
T  12076 tagctgaatgcaagcgtggggacattatctgttacaactgcaa 12034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 2251 - 2195
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttaca 81  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||    
T  2251 tgaatgatgagaggaggcggaataggagagatgctcctgctgagatagtttgttaca 2195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 3295 - 3215
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaa 95  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||||  |||| | |||||| || ||||||    
T  3295 aagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgagattatttgcttcaagtgtggggagaaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 254
Target Start/End: Complemental strand, 12282 - 12151
Alignment:
Q  123 gatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccata 222  Q
    ||||||||||| || ||||| ||||| ||||||||||||||  |   |||||||||| |||| ||| |||| || |||||||| || ||||| || ||||    
T  12282 gatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagtgtggggatattgtttgctacaactgtaatgaagaaggacata 12183  T
Q  223 tcagttcacagtgaacacggccgaagaaggtt 254  Q
    | ||||||||||| || | ||| |||||||||    
T  12182 ttagttcacagtgtacgcagcctaagaaggtt 12151  T

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Target: scaffold0079 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 36887 - 36720
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaa 155  Q
    ||||||||| |||||||| |||| ||| || || ||||||||||||||||| ||||||||| |  |||| | ||||||||| ||| |||||||  ||||     
T  36887 tgctcctgcggagatcgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttccggtgtggcaagaag 36788  T
Q  156 ggacacaccctatttgattgcaagcgtggtgatgttgtatgttacaactgcaacgaagagggccatat 223  Q
    || || ||  ||  ||||||||||||| ||||| |||| || |  || ||||| |||||||| |||||    
T  36787 ggtcatacgttagctgattgcaagcgtagtgatattgtgtgctttaattgcaaggaagagggtcatat 36720  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 30897 - 30983
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatg 111  Q
    ||||||||||||||||  | || || |||| || |||||||||||| ||||| |||||||| || ||||| ||||||||||||||||    
T  30897 tgaatgatgagaggagaactaagagaagagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 30983  T

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Target: scaffold0865 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 1146 - 1243
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgt 112  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| || |||| || ||||  || || || || |||||||||||| |||||||    
T  1146 aagcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgt 1243  T

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Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 28877 - 29010
Alignment:
Q  90 gagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgcttcaggtgtggtcagaaaggacacaccctatttgattgcaagcgtggtgatg 189  Q
    ||||||||||||||||| ||||||||| ||||||| |  |||||||| ||| |||||||  |||| || |||||  ||  ||| ||||||| |||||||     
T  28877 gagaaaggccacaagagcaatgtttgtcctaaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgaatgcaagcatggtgata 28976  T
Q  190 ttgtatgttacaactgcaacgaagagggccatat 223  Q
    |||  |||| ||||||||| | |||||| |||||    
T  28977 ttgcgtgtttcaactgcaaagtagagggtcatat 29010  T

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Target: scaffold0133 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 28159 - 28256
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgt 112  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| || |||| || ||||  || || || || |||||||||||| |||||||    
T  28159 aagcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgt 28256  T

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Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 3776 - 3863
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgt 112  Q
    |||||||||||||||| || || ||||||| || | ||| |||||| ||||| |||||||| || ||||  |||||||||||||||||    
T  3776 tgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttgctacaagtgtggcgagaggggccacaagagtaatgt 3863  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 16493 - 16584
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||||||||||||| |  | || || | ||||||||||| | ||||| |||||||| || ||||| |||||||||||||||| ||||    
T  16493 tgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgt 16584  T

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Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 36245 - 36156
Alignment:
Q  28 atgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgta 117  Q
    ||||||||||||| || || || |||| ||| ||| || |||| ||||| |||| ||| || ||||||||||||||||||||||| ||||    
T  36245 atgatgagaggagacctaagagaagagatgcccctactaagattgtttgctacaggtgtggtgagaaaggccacaagagtaatgtctgta 36156  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 17549 - 17489
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| || |||| ||| || || |||||||||||||||||||||||||||    
T  17549 tgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 17489  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 177 - 99
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaaggatgagaagaaa 134  Q
    ||||||||| ||||| || |||| ||| || || ||||||||||||||||| ||||||||| || |||| | |||||||    
T  177 tgctcctgcagagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaggaggtgaagaaa 99  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 171489 - 171447
Alignment:
Q  74 ttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || |||||||||||||||||||||||||||    
T  171489 ttgttacaattgtggtgagaaaggccacaagagtaatgtttgt 171447  T

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Target: scaffold0605 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 1700 - 1571
Alignment:
Q  25 tgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgtactaagga 124  Q
    ||||||||||||||  ||| ||  |||||  |||||||| |||  | ||||||||||| || || |  || |||||||||||||||| ||| ||  | ||    
T  1700 tgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgttaagggccacaagagtaatgcttgcacccaaga 1601  T
Q  125 tgagaagaaatgcttcaggtgtggtcagaa 154  Q
    |||||||||||| ||||| || ||||||||    
T  1600 tgagaagaaatgtttcagatgcggtcagaa 1571  T

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Target: scaffold0270 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 7303 - 7202
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| ||||||||||||||||||| |  | || || |||||||| |||||| ||||| || |  || || ||||||||||| |||||||||| ||    
T  7303 aagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatacttgtggtgagaaaggccataagagtaatgctt 7204  T
Q  115 gt 116  Q
    ||    
T  7203 gt 7202  T

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Target: scaffold0270; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 14433 - 14332
Alignment:
Q  15 aagcagagactgaatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgttt 114  Q
    ||||| ||| ||||||||||||||||||| |  | || || |||||||| |||||| ||||| || |  || || ||||||||||| |||||||||| ||    
T  14433 aagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatacttgtggtgagaaaggccataagagtaatgctt 14334  T
Q  115 gt 116  Q
    ||    
T  14333 gt 14332  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 18263 - 18174
Alignment:
Q  27 aatgatgagaggaggcccaataggagagctgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||||||||||| |  | || || |||| |||||||||| ||||| ||||  || || ||||||||||| |||||||||| ||||    
T  18263 aatgatgagaggaggccaagaaagaaagatgctactgctgagattgtttgctacacttgtggtgagaaaggccataagagtaatgcttgt 18174  T

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Target: scaffold1881 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 395 - 455
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||| | ||||| ||||||| ||| || || ||||||||||||||||| |||||||||    
T  395 tgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgt 455  T

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Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 268 - 208
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || ||||||| ||| || || | |||||||||||||||||||||||||    
T  268 tgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 208  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 12214 - 12162
Alignment:
Q  59 tcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatg 111  Q
    |||| ||||||| ||||| |||||||| || ||||| ||||||||||||||||    
T  12214 tcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 12162  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 5387 - 5327
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| ||||| ||||||| ||| || || ||||| ||||| |||||||||||||||    
T  5387 tgctcctgcggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgt 5327  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 13039 - 13099
Alignment:
Q  56 tgctcctgctgagatcgtttgttacaagtgaggagagaaaggccacaagagtaatgtttgt 116  Q
    ||||||||| || || ||||||| ||| || || | |||||||||||||||||||||||||    
T  13039 tgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 13099  T

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