View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9416_low_7 (Length: 441)

Name: NF9416_low_7
Description: NF9416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9416_low_7
NF9416_low_7
[»] chr8 (53 HSPs)
chr8 (2-423)||(3095461-3095888)
chr8 (1-195)||(8382434-8382629)
chr8 (2-191)||(39970330-39970520)
chr8 (2-191)||(32661310-32661500)
chr8 (2-227)||(9022366-9022600)
chr8 (6-227)||(7612469-7612697)
chr8 (6-191)||(27109772-27109968)
chr8 (7-195)||(11257543-11257738)
chr8 (66-191)||(14541768-14541893)
chr8 (66-191)||(22601141-22601265)
chr8 (2-191)||(32326673-32326873)
chr8 (66-195)||(30788936-30789065)
chr8 (73-191)||(34461611-34461732)
chr8 (1-233)||(2803202-2803424)
chr8 (69-191)||(36915372-36915492)
chr8 (66-196)||(27416501-27416633)
chr8 (66-191)||(34168234-34168353)
chr8 (68-196)||(18673122-18673252)
chr8 (2-192)||(43938124-43938319)
chr8 (2-117)||(2812865-2812980)
chr8 (66-195)||(5588489-5588625)
chr8 (85-195)||(42946123-42946233)
chr8 (26-229)||(156212-156400)
chr8 (66-196)||(13108988-13109119)
chr8 (66-233)||(35052436-35052603)
chr8 (66-227)||(1774093-1774241)
chr8 (2-127)||(37185610-37185734)
chr8 (69-191)||(16208955-16209068)
chr8 (129-195)||(38329115-38329181)
chr8 (70-194)||(5044253-5044378)
chr8 (2-104)||(45187244-45187356)
chr8 (136-233)||(7129266-7129361)
chr8 (2-104)||(38329003-38329114)
chr8 (3-120)||(6839283-6839410)
chr8 (133-196)||(33870754-33870817)
chr8 (66-104)||(8471351-8471389)
chr8 (136-233)||(18666613-18666708)
chr8 (136-189)||(2812817-2812870)
chr8 (134-238)||(29931322-29931423)
chr8 (148-188)||(8107264-8107304)
chr8 (66-118)||(11336055-11336107)
chr8 (135-195)||(32061515-32061575)
chr8 (2-66)||(8106836-8106901)
chr8 (76-196)||(26438975-26439086)
chr8 (148-239)||(41790222-41790309)
chr8 (136-215)||(8471264-8471341)
chr8 (78-195)||(32271510-32271628)
chr8 (66-118)||(41790163-41790215)
chr8 (148-195)||(6839218-6839265)
chr8 (148-195)||(11336112-11336159)
chr8 (148-191)||(45187389-45187432)
chr8 (66-120)||(7129353-7129407)
chr8 (66-118)||(2067778-2067830)
[»] chr7 (46 HSPs)
chr7 (2-233)||(40298813-40299043)
chr7 (2-196)||(19920231-19920424)
chr7 (25-191)||(5723009-5723173)
chr7 (26-177)||(33845391-33845544)
chr7 (66-227)||(17869209-17869368)
chr7 (66-188)||(34002155-34002277)
chr7 (66-195)||(42259571-42259699)
chr7 (73-191)||(19906420-19906538)
chr7 (66-233)||(32345856-32346024)
chr7 (8-195)||(3680877-3681074)
chr7 (66-195)||(31416772-31416903)
chr7 (76-196)||(42044010-42044132)
chr7 (70-233)||(1103449-1103611)
chr7 (66-177)||(26963499-26963612)
chr7 (66-195)||(41905957-41906085)
chr7 (69-196)||(30833119-30833246)
chr7 (69-215)||(18733437-18733583)
chr7 (110-196)||(26527463-26527549)
chr7 (66-191)||(39117510-39117636)
chr7 (66-191)||(10684851-10684978)
chr7 (66-222)||(30514950-30515106)
chr7 (66-191)||(36447091-36447218)
chr7 (66-195)||(28044163-28044283)
chr7 (73-191)||(36836065-36836184)
chr7 (110-233)||(19288414-19288535)
chr7 (73-233)||(22627383-22627534)
chr7 (2-233)||(32275170-32275400)
chr7 (129-195)||(43813430-43813496)
chr7 (66-195)||(36447633-36447753)
chr7 (66-195)||(6521820-6521950)
chr7 (136-195)||(18886671-18886730)
chr7 (66-152)||(34733356-34733440)
chr7 (130-191)||(22597236-22597297)
chr7 (70-131)||(48838711-48838772)
chr7 (66-233)||(40207412-40207565)
chr7 (68-215)||(42121534-42121671)
chr7 (6-120)||(18886722-18886846)
chr7 (148-196)||(40805025-40805073)
chr7 (66-120)||(42010597-42010651)
chr7 (69-131)||(47272217-47272279)
chr7 (73-104)||(19277074-19277105)
chr7 (148-195)||(32873268-32873315)
chr7 (66-121)||(33056307-33056362)
chr7 (125-191)||(43749916-43749982)
chr7 (2-43)||(48838628-48838669)
chr7 (76-104)||(29001596-29001624)
[»] chr4 (60 HSPs)
chr4 (1-196)||(31987301-31987497)
chr4 (2-189)||(30492732-30492921)
chr4 (49-195)||(54091956-54092102)
chr4 (66-195)||(19849082-19849211)
chr4 (66-191)||(30022070-30022195)
chr4 (66-195)||(47321142-47321274)
chr4 (66-195)||(31941556-31941687)
chr4 (2-233)||(29840037-29840256)
chr4 (2-196)||(45049706-45049900)
chr4 (6-233)||(44855204-44855441)
chr4 (66-191)||(24259613-24259740)
chr4 (66-195)||(34124293-34124424)
chr4 (66-196)||(45520483-45520612)
chr4 (66-191)||(17499740-17499867)
chr4 (66-233)||(28116207-28116374)
chr4 (26-195)||(37445658-37445837)
chr4 (77-195)||(22212339-22212457)
chr4 (70-196)||(29289920-29290045)
chr4 (66-176)||(45889580-45889692)
chr4 (2-191)||(34096017-34096217)
chr4 (2-179)||(42672404-42672590)
chr4 (66-179)||(35928505-35928616)
chr4 (70-191)||(6510120-6510241)
chr4 (66-195)||(51434280-51434411)
chr4 (14-233)||(52732561-52732780)
chr4 (1-233)||(36805400-36805633)
chr4 (66-227)||(6461977-6462143)
chr4 (71-196)||(11835104-11835227)
chr4 (26-174)||(34360033-34360182)
chr4 (82-196)||(45903446-45903560)
chr4 (66-191)||(4408200-4408328)
chr4 (66-195)||(55126495-55126626)
chr4 (110-191)||(19282478-19282560)
chr4 (136-233)||(50072243-50072338)
chr4 (47-119)||(38692464-38692536)
chr4 (72-195)||(38761857-38761977)
chr4 (66-191)||(15501179-15501295)
chr4 (88-187)||(17317889-17317989)
chr4 (82-196)||(3093350-3093460)
chr4 (136-195)||(38692412-38692471)
chr4 (6-191)||(43421079-43421265)
chr4 (66-196)||(54512029-54512150)
chr4 (148-191)||(21045158-21045201)
chr4 (66-120)||(21045206-21045260)
chr4 (66-104)||(54233907-54233945)
chr4 (124-191)||(6232116-6232184)
chr4 (2-120)||(32140937-32141065)
chr4 (66-118)||(39671131-39671183)
chr4 (136-191)||(32141057-32141112)
chr4 (148-191)||(56556360-56556403)
chr4 (151-232)||(1868208-1868286)
chr4 (114-179)||(44835348-44835414)
chr4 (66-120)||(51930649-51930703)
chr4 (147-196)||(54233843-54233892)
chr4 (72-179)||(55548249-55548361)
chr4 (66-104)||(34534115-34534154)
chr4 (136-191)||(51930602-51930657)
chr4 (70-120)||(31817229-31817279)
chr4 (66-94)||(32141163-32141191)
chr4 (147-191)||(39671187-39671231)
[»] chr5 (44 HSPs)
chr5 (2-233)||(38982102-38982332)
chr5 (1-191)||(4371369-4371556)
chr5 (2-233)||(166597-166836)
chr5 (51-196)||(28640083-28640227)
chr5 (2-191)||(13066719-13066909)
chr5 (62-196)||(32690749-32690883)
chr5 (66-233)||(36660393-36660556)
chr5 (73-233)||(33585002-33585162)
chr5 (70-215)||(4833657-4833802)
chr5 (66-195)||(34171166-34171294)
chr5 (2-191)||(12992070-12992258)
chr5 (66-191)||(42329566-42329693)
chr5 (66-233)||(33822523-33822690)
chr5 (69-191)||(39059812-39059933)
chr5 (66-191)||(793626-793753)
chr5 (6-194)||(15400174-15400373)
chr5 (70-191)||(27810352-27810473)
chr5 (66-191)||(29653534-29653661)
chr5 (66-233)||(33741431-33741596)
chr5 (69-191)||(4742291-4742414)
chr5 (69-191)||(4751555-4751678)
chr5 (69-191)||(36783361-36783483)
chr5 (6-191)||(14980003-14980186)
chr5 (66-191)||(31557363-31557482)
chr5 (85-191)||(17674214-17674320)
chr5 (66-170)||(29044746-29044851)
chr5 (2-196)||(43257808-43258003)
chr5 (1-121)||(12167557-12167688)
chr5 (66-142)||(27652341-27652419)
chr5 (114-195)||(7731663-7731744)
chr5 (78-196)||(16886086-16886195)
chr5 (73-195)||(36296161-36296283)
chr5 (66-179)||(32963030-32963142)
chr5 (51-120)||(41566861-41566930)
chr5 (136-233)||(4011728-4011822)
chr5 (66-120)||(31889796-31889850)
chr5 (148-196)||(41845386-41845434)
chr5 (149-195)||(7388286-7388332)
chr5 (155-195)||(12167693-12167733)
chr5 (148-227)||(31889714-31889791)
chr5 (133-196)||(33693741-33693804)
chr5 (66-104)||(4011682-4011720)
chr5 (66-104)||(7388214-7388252)
chr5 (152-196)||(29051620-29051664)
[»] chr3 (65 HSPs)
chr3 (26-195)||(3000754-3000924)
chr3 (2-195)||(4391906-4392100)
chr3 (2-177)||(35099323-35099499)
chr3 (2-177)||(647540-647725)
chr3 (66-227)||(37225617-37225776)
chr3 (8-191)||(38457466-38457659)
chr3 (2-191)||(83302-83500)
chr3 (26-195)||(15514707-15514877)
chr3 (66-191)||(46363032-46363158)
chr3 (66-191)||(54933225-54933352)
chr3 (2-191)||(44854321-44854518)
chr3 (67-233)||(25722482-25722648)
chr3 (66-191)||(2988630-2988756)
chr3 (66-195)||(32303925-32304056)
chr3 (2-191)||(36310210-36310397)
chr3 (7-227)||(26965461-26965680)
chr3 (66-233)||(54261381-54261548)
chr3 (2-191)||(43580481-43580684)
chr3 (66-196)||(1340951-1341072)
chr3 (66-233)||(20512516-20512683)
chr3 (69-233)||(44645305-44645468)
chr3 (66-195)||(2568034-2568154)
chr3 (66-195)||(5244588-5244716)
chr3 (70-191)||(27027739-27027860)
chr3 (66-191)||(43169340-43169467)
chr3 (66-233)||(43687903-43688073)
chr3 (76-191)||(50420265-50420379)
chr3 (3-191)||(27483142-27483331)
chr3 (65-215)||(49470773-49470923)
chr3 (3-119)||(16240654-16240771)
chr3 (73-191)||(36541497-36541617)
chr3 (66-195)||(36771598-36771718)
chr3 (77-233)||(41287042-41287198)
chr3 (66-195)||(22730927-22731063)
chr3 (66-195)||(34059878-34059996)
chr3 (70-196)||(43600218-43600342)
chr3 (70-191)||(51381727-51381853)
chr3 (71-196)||(22414756-22414880)
chr3 (76-233)||(25061671-25061816)
chr3 (66-195)||(19552542-19552662)
chr3 (70-177)||(27039347-27039454)
chr3 (66-177)||(53560685-53560797)
chr3 (70-233)||(44648437-44648588)
chr3 (130-196)||(45095554-45095618)
chr3 (136-195)||(53716031-53716090)
chr3 (111-195)||(42857126-42857210)
chr3 (115-173)||(52222816-52222874)
chr3 (66-196)||(42007082-42007213)
chr3 (66-120)||(35239438-35239492)
chr3 (69-191)||(43599855-43599968)
chr3 (136-195)||(52202383-52202442)
chr3 (66-104)||(2662514-2662552)
chr3 (148-239)||(13485909-13485998)
chr3 (147-191)||(35239392-35239436)
chr3 (148-191)||(790102-790145)
chr3 (66-101)||(40048970-40049005)
chr3 (135-193)||(31291055-31291113)
chr3 (66-95)||(38165683-38165712)
chr3 (148-185)||(38165746-38165783)
chr3 (2-66)||(44648358-44648423)
chr3 (7-40)||(50420389-50420422)
chr3 (7-43)||(6084780-6084816)
chr3 (133-177)||(9167766-9167810)
chr3 (136-175)||(16240621-16240661)
chr3 (113-185)||(38100058-38100130)
[»] chr2 (39 HSPs)
chr2 (2-233)||(4536539-4536766)
chr2 (1-191)||(1360182-1360373)
chr2 (2-233)||(24775154-24775393)
chr2 (66-195)||(7743402-7743531)
chr2 (6-191)||(4840679-4840874)
chr2 (66-233)||(43388679-43388844)
chr2 (2-191)||(36360323-36360520)
chr2 (66-215)||(2459756-2459905)
chr2 (73-191)||(33093373-33093493)
chr2 (26-195)||(6591966-6592136)
chr2 (70-172)||(37106886-37106988)
chr2 (26-191)||(14511465-14511630)
chr2 (66-191)||(775906-776032)
chr2 (66-215)||(10580878-10581027)
chr2 (66-178)||(41984436-41984551)
chr2 (66-196)||(1298802-1298932)
chr2 (66-196)||(16316709-16316839)
chr2 (67-196)||(39866694-39866825)
chr2 (15-177)||(43460792-43460961)
chr2 (66-176)||(25332591-25332702)
chr2 (66-233)||(43344245-43344407)
chr2 (72-191)||(18374792-18374911)
chr2 (2-191)||(29795147-29795337)
chr2 (66-196)||(4566143-4566275)
chr2 (136-196)||(14378316-14378376)
chr2 (66-192)||(40987304-40987419)
chr2 (66-175)||(40410473-40410573)
chr2 (66-195)||(1381751-1381869)
chr2 (136-233)||(14697977-14698072)
chr2 (66-120)||(34225826-34225880)
chr2 (1-119)||(14378195-14378323)
chr2 (147-195)||(45148055-45148103)
chr2 (136-191)||(4766280-4766335)
chr2 (148-191)||(34225778-34225821)
chr2 (66-120)||(4766234-4766288)
chr2 (4-62)||(44228609-44228668)
chr2 (157-195)||(45372645-45372683)
chr2 (148-196)||(42969899-42969947)
chr2 (66-104)||(14698082-14698120)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-233)||(13015-13246)
[»] chr6 (24 HSPs)
chr6 (1-233)||(30627057-30627287)
chr6 (2-191)||(12828629-12828828)
chr6 (2-195)||(8052346-8052539)
chr6 (6-191)||(29915546-29915743)
chr6 (69-215)||(31275666-31275811)
chr6 (7-233)||(29927173-29927407)
chr6 (66-233)||(23936606-23936769)
chr6 (66-233)||(17345156-17345322)
chr6 (66-191)||(4123878-4124002)
chr6 (67-195)||(34576545-34576675)
chr6 (70-191)||(26189513-26189636)
chr6 (111-229)||(4132042-4132157)
chr6 (66-191)||(26669120-26669245)
chr6 (70-184)||(11785129-11785242)
chr6 (70-195)||(10494788-10494913)
chr6 (82-191)||(32258727-32258838)
chr6 (73-195)||(25932629-25932754)
chr6 (82-195)||(6140601-6140715)
chr6 (111-195)||(6143085-6143169)
chr6 (82-195)||(19689874-19689985)
chr6 (66-191)||(34439431-34439560)
chr6 (66-233)||(1924696-1924851)
chr6 (110-215)||(30626852-30626955)
chr6 (148-191)||(3015921-3015964)
[»] chr1 (57 HSPs)
chr1 (2-233)||(45377107-45377337)
chr1 (66-233)||(28751430-28751596)
chr1 (67-191)||(11650063-11650187)
chr1 (66-191)||(5317600-5317724)
chr1 (69-227)||(12002217-12002373)
chr1 (30-191)||(12851746-12851908)
chr1 (66-233)||(17806397-17806562)
chr1 (66-227)||(254933-255095)
chr1 (2-233)||(15647021-15647248)
chr1 (2-215)||(6332149-6332371)
chr1 (66-196)||(44582800-44582932)
chr1 (2-196)||(6377234-6377429)
chr1 (70-196)||(17919846-17919972)
chr1 (14-195)||(1428867-1429059)
chr1 (66-193)||(2245789-2245918)
chr1 (66-233)||(2458973-2459136)
chr1 (66-191)||(26252123-26252250)
chr1 (66-227)||(28200244-28200406)
chr1 (66-195)||(15698773-15698902)
chr1 (66-233)||(50349885-50350045)
chr1 (7-191)||(43929690-43929883)
chr1 (66-239)||(22664900-22665067)
chr1 (2-196)||(40719015-40719219)
chr1 (66-161)||(672303-672397)
chr1 (66-195)||(42650271-42650401)
chr1 (73-215)||(44024528-44024670)
chr1 (66-195)||(44583773-44583902)
chr1 (66-190)||(52403482-52403606)
chr1 (66-178)||(5854246-5854360)
chr1 (2-191)||(48259811-48260001)
chr1 (82-196)||(50158345-50158459)
chr1 (72-191)||(11134488-11134608)
chr1 (66-195)||(43738276-43738405)
chr1 (25-120)||(24040995-24041100)
chr1 (2-120)||(84466-84594)
chr1 (148-243)||(24041105-24041198)
chr1 (147-233)||(43755018-43755102)
chr1 (148-225)||(84598-84673)
chr1 (66-120)||(1430559-1430613)
chr1 (130-196)||(40060983-40061049)
chr1 (148-227)||(49894777-49894854)
chr1 (7-104)||(10690908-10691015)
chr1 (148-195)||(26582926-26582973)
chr1 (136-191)||(38132260-38132315)
chr1 (66-104)||(37437426-37437464)
chr1 (147-195)||(48320093-48320141)
chr1 (136-191)||(1430605-1430660)
chr1 (2-120)||(43755104-43755231)
chr1 (150-195)||(9552436-9552481)
chr1 (148-193)||(10691035-10691080)
chr1 (3-102)||(43105551-43105660)
chr1 (155-196)||(43105692-43105733)
chr1 (2-65)||(50349805-50349869)
chr1 (148-195)||(9333108-9333155)
chr1 (148-195)||(9356881-9356928)
chr1 (66-121)||(30006205-30006260)
chr1 (66-117)||(49894861-49894912)
[»] scaffold0047 (1 HSPs)
scaffold0047 (66-233)||(70475-70642)
[»] scaffold0886 (1 HSPs)
scaffold0886 (70-195)||(4135-4260)
[»] scaffold0003 (1 HSPs)
scaffold0003 (73-195)||(321727-321851)
[»] scaffold0238 (1 HSPs)
scaffold0238 (70-193)||(16065-16188)
[»] scaffold0119 (1 HSPs)
scaffold0119 (66-191)||(1548-1673)
[»] scaffold0519 (1 HSPs)
scaffold0519 (76-195)||(7732-7849)
[»] scaffold0072 (1 HSPs)
scaffold0072 (2-191)||(12030-12219)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-142)||(158154-158229)
[»] scaffold0194 (2 HSPs)
scaffold0194 (82-191)||(8163-8274)
scaffold0194 (6-65)||(8289-8349)
[»] scaffold0060 (2 HSPs)
scaffold0060 (2-86)||(31663-31748)
scaffold0060 (154-195)||(31626-31667)
[»] scaffold0580 (2 HSPs)
scaffold0580 (148-233)||(1606-1691)
scaffold0580 (148-233)||(9345-9430)


Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 2 - 423
Target Start/End: Original strand, 3095461 - 3095888
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||     
T  3095461 aattacacacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgccaaaggaaaagacaaacttaaagttgcattgaaaag 3095560  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaa 200  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3095561 tgtgcgagagaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacgcaa 3095660  T
Q  201 tcttttttcgctaaaatgatactcattatgaaagtgaggagtaagtac-nnnnnnnnnnnnnnnnnnncggaggagtatgttgtagcaaagaataactca 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||    
T  3095661 tcttttttcgctaaaataatactcattatgaaagtgaggagtaagtacaaaaaagtaaacaaaaaaaacggaggagtatgttgtagcaaagaataactca 3095760  T
Q  300 tatagaacact----nnnnnnnctaataataaactcatgaactcgtcatcaccaacatgtattctgggcaaagagacctttaatcgtttaagccgataat 395  Q
    |||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3095761 tatagaacactacaaaaaaataataataataaactcatgaactcgtcatcaccaacatgtattctgggcaaagagacctttaatcgtttaagccgatgat 3095860  T
Q  396 ttcacaagtcaattgtgagataatttct 423  Q
    ||||||||||||||||||||||||||||    
T  3095861 ttcacaagtcaattgtgagataatttct 3095888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 8382434 - 8382629
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    |||||||||| |||||||| |||  ||| |||||||| ||||| | | |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  8382434 taattgcacataaattaaagaatgaaataaaataatcgttagacataacacttttactaaactgcccaagaaaaagacaaacttatagttgcattgaaaa 8382533  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||| | | ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  8382534 ttgtgtgagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 39970520 - 39970330
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatagac-acttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||| |||||||| |||  |||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39970520 aattgcacataaattaaagaatgaaatgaaataatcattagacataccacttttactaaactgcccaagaaaaagacaaacttaaagttgcattgaaaat 39970421  T
Q  101 tgtgcgtgtgaaaagttggagt-atttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||| | |||||||| |||| | ||| ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||    
T  39970420 tgtgcgagagaaaagtttgagtaaattagtgagggtaaagttggga-gaaaaaactaatgttgtattggaaatgtaaagtaacattcatttt 39970330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 32661500 - 32661310
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||||||||||||||||  |||  ||| |||||||||||||| | | ||||| |||||||||||  | | |||||||||||||||||||| |||||||||    
T  32661500 aattgcacacaaattaaggaatgaaataaaataatcattagacatatcacttctactaaactgcacacggaaaagacaaacttaaagttgtattgaaaat 32661401  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||| | | |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  32661400 tgtgtgagagaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 9022600 - 9022366
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaa-gttg 90  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| | | |||||||||||||||||          || |||||||||||||||||| ||||    
T  9022600 aattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttatatgaaaaagacaaacttaaaagttg 9022501  T
Q  91 cattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattt 190  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||| ||||||||||    
T  9022500 cattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattt 9022401  T
Q  191 taaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    |||||  ||||  ||||| ||||||||||||||||||    
T  9022400 taaaa--caattctttttggctaaaatgatactcatt 9022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 7612697 - 7612469
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagatagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattga 96  Q
    ||||||| ||||| ||||||||||||||||||||| |||| |    ||||||||||||||         ||||||||||||||| |||||||||||||||    
T  7612697 gcacacagattaagaaatagaatgaaataatcattggatataacgctttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 7612598  T
Q  97 aaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||| | | |||||||||||||||||||| ||||||||||||| ||  |||| |||| ||||||||||||||||||||| |||||||||||||||     
T  7612597 aaattgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaa- 7612499  T
Q  197 gcaatcttttttcgctaaaatgatactcatt 227  Q
     |||| |||||| | |||| ||| |||||||    
T  7612498 -caatttttttttgttaaagtgacactcatt 7612469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 27109772 - 27109968
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcct----------aagaaaaagacaaacttaaagttgcatt 94  Q
    ||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||| || ||          ||||||| ||||||||||||||||||||    
T  27109772 gcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggacaaacttaaagttgcatt 27109871  T
Q  95 gaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    | |||||||| | | |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||||    
T  27109872 ggaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcatttt 27109968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 11257738 - 11257543
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattagatagacacttttactaaactgcct---------aagaaaaagacaaacttaaagttgcattgaa 97  Q
    |||||||||||| |||| |||||||||||| |||| | | ||| |||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  11257738 cacacaaattaagaaatggaatgaaataattattaaaaaaacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaa 11257639  T
Q  98 aattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||| | | ||||||||| |||||||||||||  ||||||||| ||  |||||||||||||||||| |||||||||||| |||||||||||||||    
T  11257638 aattgtgtgagagaaaagttgaagtatttattgagattaaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaa 11257543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 14541768 - 14541893
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||| |||||||||||||||||||||||||||||||| | | ||||||||| |||||||||| ||| ||||||||| || ||||||||||||||||||    
T  14541768 taagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaaggataaagttggaagaaaaaaattaaagttgtat 14541867  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    |  ||||||||||| |||||||||||    
T  14541868 tagaaatgtaaagtgacattcatttt 14541893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 22601265 - 22601141
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||||||||||||||||||||||||||||||| || | | |||| |||||||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  22601265 taagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaaggttggagtatttatcgagggtaaagtt-ggaagaaacaattaaagttgtat 22601167  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    || ||||||||||| |||||||||||    
T  22601166 tggaaatgtaaagtgacattcatttt 22601141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 32326673 - 32326873
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattaga--tagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttg 90  Q
    ||||||||||| |||||  |||  ||||||||||||||||||  || |||||||||||||||||||         || |||||||||||| |||||||||    
T  32326673 aattgcacacagattaaggaatgaaatgaaataatcattagacgta-acacttttactaaactgcccttgttttatatgaaaaagacaaatttaaagttg 32326771  T
Q  91 cattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggagg-aaaaaattaaagttgtattgaaaatgtaaagtaacattcatt 189  Q
    |||||||||||||| | |  |||||||||||||||||||| ||||||| |||  ||| |||||||||||||||||||||||||||||||| ||||| |||    
T  32326772 cattgaaaattgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaaaatgtaaagtgacatttatt 32326871  T
Q  190 tt 191  Q
    ||    
T  32326872 tt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 30789065 - 30788936
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||| |||||||||| || | | |||||||||||||||||| | ||||||||||| | || ||||||||||||||||||    
T  30789065 taagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaagttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtat 30788966  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||| ||||||||| ||||| |||||||||    
T  30788965 tgaatatgtaaagtgacatttattttaaaa 30788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 34461611 - 34461732
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgt--gaaaagttggagtatttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaa 169  Q
    |||||||||||||||||||||||||||||||| | |   ||||||||||||| |||||||||||||||||||| || |||| |||||||||||||||| |    
T  34461611 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaattaaagttgtattgga 34461710  T
Q  170 aatgtaaagtaacattcatttt 191  Q
    |||||||||| |||||||||||    
T  34461711 aatgtaaagtgacattcatttt 34461732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2803202 - 2803424
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    ||||||||||||||||    |||  |||||||||||||||| | | | |||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  2803202 taattgcacacaaattttggaatgaaatgaaataatcattatacataacacttttattaaactgtctaagaaaaagacaaacttaaagttgaattgaaaa 2803301  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag---gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||  | |||||||||           |||||||||||||||||   |||||||||||| |||||||||||||||||||| ||||| ||||| |||     
T  2803302 ttgtgcaagagaaaagttg-----------gagggtaaagttgggagggagaaaaaattaaaattgtattgaaaatgtaaagtgacatttattttgaaa- 2803389  T
Q  197 gcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
     |||  |||||| |||||||||| |||||||||||||    
T  2803390 -caa-attttttagctaaaatgacactcattatgaaa 2803424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 36915492 - 36915372
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||||||||||||||||||||||||||||||||| |    ||||  | || |||||||||| ||||||||||| || |||||||||||||||||||||    
T  36915492 gaaaaagacaaacttaaagttgcattgaaaattgtgagaa--aaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattga 36915395  T
Q  169 aaatgtaaagtaacattcatttt 191  Q
    ||||||||||| |||||||||||    
T  36915394 aaatgtaaagtgacattcatttt 36915372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 27416633 - 27416501
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga----aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagtt 161  Q
    ||||||||||||||||||| | ||||||||||||||||| ||| ||    ||||||||||||||||||||||||||||||||  |  ||||| |||||||    
T  27416633 taagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaaagttggacg--aaaaactaaagtt 27416536  T
Q  162 gtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||| ||||||||||| ||||||||||| ||||    
T  27416535 gtattggaaatgtaaagtgacattcattttgaaat 27416501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 34168234 - 34168353
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||| |||||||||||||||||||||||||||||||| | | |||      |||||||| |||||||||||||||| || ||||| ||||||||||||    
T  34168234 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaa------gagtatttcttgagggtaaagttggaagaaaaaagttaaagttgtat 34168327  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||| |||||||||||    
T  34168328 tgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 18673122 - 18673252
Alignment:
Q  68 agaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||| ||||||||||| ||| ||||||||||||| | | ||  |||||||||||||||||| | ||||||||||| || ||||||||||||| | ||    
T  18673122 agaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagtcgcat 18673221  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||  ||||||||||||||||    
T  18673222 tgaaaatgtaaagcgacattcattttaaaat 18673252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 43938319 - 43938124
Alignment:
Q  2 aattgcacacaaattaaaaaatag---aatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaa 97  Q
    ||||||||||||||||| |||||    |||||||||||||||||| | | || ||||| |||| || | |||||||||| ||||||||||||||||| ||    
T  43938319 aattgcacacaaattaagaaatattataatgaaataatcattagacaaaacatttttattaaattgtccaagaaaaagataaacttaaagttgcattaaa 43938220  T
Q  98 aattgtgcgtgtgaaaagttggagtatttattgagggt-aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttta 192  Q
    || |||||| | ||||||||||||||||||||||  || ||| || | |  |||||||||||||| ||||  |||||||||||  |||||||||||    
T  43938219 aagtgtgcgagagaaaagttggagtatttattgaatgtaaaatttagaaaaaaaaaattaaagttctattcgaaatgtaaagtggcattcatttta 43938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 2812980 - 2812865
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||| |||||||||  ||| ||||||||||||||||||| | | |||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  2812980 aattgcatacaaattaagtaattgaatgaaataatcattagacataacacttttactaaactgcccaagaaaaagaaaaacttaaa-ttgcattgaaaat 2812882  T
Q  101 tgtgcgtgtgaaaagtt 117  Q
    |||||| | ||||||||    
T  2812881 tgtgcgagagaaaagtt 2812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 5588489 - 5588625
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcatt-------gaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaa 158  Q
    |||||||||||||||||||||||| ||||       |||| ||||| | | |||||||| ||||||||||||| ||||||||||| || |||||||||||    
T  5588489 taagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaa 5588588  T
Q  159 gttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| ||||||||| | ||||||| |||||||    
T  5588589 gttgtattggaaatgtaaattgacattcagtttaaaa 5588625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 42946233 - 42946123
Alignment:
Q  85 aagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacat 184  Q
    |||||||||| ||||||||| | | ||||| || |||||||||||||||||||| |||  || ||||||||||||||||||| |||||||||| | ||||    
T  42946233 aagttgcattaaaaattgtgtgagagaaaaattagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacat 42946134  T
Q  185 tcattttaaaa 195  Q
    |||||||||||    
T  42946133 tcattttaaaa 42946123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 156400 - 156212
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtat 124  Q
    |||||||||||||||||| | | |||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||| | ||||||             
T  156400 aatgaaataatcattagacataacacttttattaaactgccgaagaaaaggacaaacttaaagttgtattgaaaattgtgcgagagaaaag--------- 156310  T
Q  125 ttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactc 224  Q
       | ||  ||||||||||||| |||||||||||||| |||||  |||||||||| ||||||||||| |||  |||  |||||| |||||| ||||||||    
T  156309 ---tggaaagtaaagttgggagaaaaaaattaaagttatattgggaatgtaaagtgacattcattttgaaa--caa--ttttttggctaaagtgatactc 156217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 13109119 - 13108988
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||| ||||| ||||||| ||||||||| | | ||  |||||||||||||||||| ||| || |||||| || |||||||||||||||     
T  13109119 taagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagagttggaag-aaaaaattaaagttgc 13109021  T
Q  164 attgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||| | ||||||||||| ||||    
T  13109020 attgaaaatgtaaaatgacattcattttgaaat 13108988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 35052603 - 35052436
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaatt--gtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||| ||  ||||||||||||||||||||  ||| | | ||||| || ||||||||||||| || |||||||  || ||||||||||||||||    
T  35052603 taagaaaaagataagtttaaagttgcattgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgt 35052504  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||| |||||||||   |||||||||||||||  |||| |||||| ||||||  || ||||||| |||||    
T  35052503 attggaaatgtaaaacgacattcattttaaaa--caatttttttttgctaaagcgacactcattttgaaa 35052436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 1774093 - 1774241
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||||||||||||||||  | |  ||||||| |||         || |||||||||| || ||||||||||||||||||    
T  1774093 taagaaaaagacaaaattaaagttgcattgaaaattgtaagag--aaaagttagag---------agcgtaaagttggaagaaaaaaattaaagttgtat 1774181  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    |||||||||||| | |||||||||||||||  |||| |||||| |||||| ||| |||||||    
T  1774182 tgaaaatgtaaattgacattcattttaaaa--caattttttttggctaaagtgacactcatt 1774241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 37185610 - 37185734
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||| |||||||   |||||||||||||||||||||| | | ||||||||||||| |  ||||||||  |||||||||||||||||||||||||     
T  37185610 aattgcacataaattaaggtatagaatgaaataatcattagacataacacttttactaaaatatctaagaaa--gacaaacttaaagttgcattgaaaaa 37185707  T
Q  101 tgtgcgtgtgaaaagttggagtattta 127  Q
    | | || | ||||||||||||||||||    
T  37185708 tatacgagagaaaagttggagtattta 37185734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 16209068 - 16208955
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    ||||||||||||||||||||||||||||||||| || | | ||||||||| ||         |||||||| ||   || |||||||||||||||||||||    
T  16209068 gaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgtag---------agggtaaaatttaaagaaaaaaattaaagttgtattga 16208978  T
Q  169 aaatgtaaagtaacattcatttt 191  Q
    ||||||||||| |||||||||||    
T  16208977 aaatgtaaagtgacattcatttt 16208955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 38329115 - 38329181
Alignment:
Q  129 tgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||  || ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  38329115 tgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaa 38329181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 5044253 - 5044378
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattga 168  Q
    ||||| ||||| ||||||||| ||| ||||||||| |   ||||||||| |||||||||||||  ||||||||| ||  ||||||||||| || ||||||    
T  5044253 aaaaatacaaatttaaagttgtattaaaaattgtgtgatagaaaagttgaagtatttattgagaataaagttggaagaaaaaaaattaaaattatattga 5044352  T
Q  169 aaatgtaaagtaacattcattttaaa 194  Q
    ||||||||| | | ||||||||||||    
T  5044353 aaatgtaaaatgatattcattttaaa 5044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 45187244 - 45187356
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| |||||  |||| |||||||||||||||||| | |||||||||||||||||| |         ||||||||||||||||||||||||||    
T  45187244 aattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaacttaaagttgc 45187343  T
Q  92 attgaaaattgtg 104  Q
     ||||||||||||    
T  45187344 tttgaaaattgtg 45187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 7129361 - 7129266
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| || ||||||||||||||| |||||||||||||||| ||||||||||| ||||  ||| |||||| | |||| ||| ||||||| |||||    
T  7129361 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaat--aatttttttttgttaaagtgacactcattttgaaa 7129266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 38329003 - 38329114
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc--------taagaaaaagacaaacttaaagttgca 92  Q
    ||||||||||| |||||  ||| ||||||||||||||||||| |  |||||||||||||||||||        |||  ||||||||||||||||||||||    
T  38329003 aattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaactgccttactttataatcaaaagacaaacttaaagttgca 38329102  T
Q  93 ttgaaaattgtg 104  Q
    ||||||||||||    
T  38329103 ttgaaaattgtg 38329114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 6839410 - 6839283
Alignment:
Q  3 attgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgca 92  Q
    |||| ||||| |||||||||| ||||||||||||||||||| |  |||||||||||||| ||||         |||||||||||||||| |||| |||||    
T  6839410 attgtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgca 6839311  T
Q  93 ttgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||| || | | |||||||||||    
T  6839310 ttgaaaattatgtgagagaaaagttgga 6839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 33870817 - 33870754
Alignment:
Q  133 ggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||| || ||||||||||||||||||||||||| |||||| |||| |||||| ||||    
T  33870817 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaat 33870754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 8471389 - 8471351
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8471389 taagaaaaagacaaacttaaagttgcattgaaaattgtg 8471351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 18666613 - 18666708
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| || |||||| |||||||| |||| ||||||||||| ||||||||||| |||   ||| |||||| |||||| ||||||||||| |||||    
T  18666613 aaagttggaagaaaaaaactaaagttgcattggaaatgtaaagtgacattcattttgaaa--gaatttttttttgctaaagtgatactcattttgaaa 18666708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 2812870 - 2812817
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatt 189  Q
    |||||| |||| |||||||||||||||||||| |||||||||| ||||||||||    
T  2812870 aaagttaggagaaaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 29931322 - 29931423
Alignment:
Q  134 gtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| | || |||||||||||||||||||| ||||||||||| | ||| |||||||||  |||| |||||| |||||| ||| ||||||| |||||    
T  29931322 gtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaa--caat-tttttttgctaaagtgacactcattttgaaa 29931418  T
Q  234 gtgag 238  Q
     ||||    
T  29931419 ctgag 29931423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 8107264 - 8107304
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcat 188  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  8107264 aaaaaattaaagttgtattgaaaatgtaaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 11336055 - 11336107
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttg 118  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||||    
T  11336055 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttg 11336107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 32061515 - 32061575
Alignment:
Q  135 taaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| || ||| ||||||| |||||| ||||||||||||| |||||||||||||||    
T  32061515 taaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaa 32061575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 8106836 - 8106901
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcct 66  Q
    |||||||||||||||||| |||  |||||||||||||||||| | | |||||||| ||||||||||    
T  8106836 aattgcacacaaattaaagaatgaaatgaaataatcattagacatagcacttttattaaactgcct 8106901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 26439086 - 26438975
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgt 174  Q
    ||||||||||||||||||||||||||||| | | |||||||| ||         |||| ||||||||| ||  ||||||||||||||||| || ||||||    
T  26439086 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttga---------gaggataaagttggaagaaaaaaaattaaagttgta-tggaaatgt 26438997  T
Q  175 aaagtaacattcattttaaaat 196  Q
    |||||  |||||||||||||||    
T  26438996 aaagtggcattcattttaaaat 26438975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 41790222 - 41790309
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaagtgagg 239  Q
    |||||||||||||||||||  ||||||||||| ||||||||||| ||   |||| |||||| |||||| ||| ||||||| |||||| ||||    
T  41790222 aaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaa---caatgtttttt-gctaaagtgacactcattttgaaagagagg 41790309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 8471341 - 8471264
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    |||||||| || ||||||||||||||| |||| ||||||||||  ||||||||||| |||  |||| |||||| ||||||    
T  8471341 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttgaaa--caattttttttggctaaa 8471264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 32271628 - 32271510
Alignment:
Q  78 aaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 175  Q
    ||||||||| |||||||||||||| || | | ||  ||||||| |||||||||| || ||||| |||| || ||||||||||| ||  ||||||||||||    
T  32271628 aaacttaaaattgcattgaaaattatgtgagagataaaagttgaagtatttatt-agcgtaaaattggaagaaaaaaattaaaattacattgaaaatgta 32271530  T
Q  176 aagtaacattcattttaaaa 195  Q
    ||   | |||||||||||||    
T  32271529 aaaagatattcattttaaaa 32271510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 41790163 - 41790215
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttg 118  Q
    ||||||||||||||| ||||||||| ||||||||||||| | | |||||||||    
T  41790163 taagaaaaagacaaatttaaagttggattgaaaattgtgtgagagaaaagttg 41790215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 6839265 - 6839218
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||| | || |||||||||||||| |||||||||||||    
T  6839265 aaaaaattaaagttattttaaaaatgtaaagtaaaattcattttaaaa 6839218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 11336112 - 11336159
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| |||||||||||||||||||| | | |||||||||||||    
T  11336112 aaaaaattacagttgtattgaaaatgtaaaatgatattcattttaaaa 11336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 45187389 - 45187432
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||    
T  45187389 aaaaaattaaagttgtattgaaaatataaagtgacatttatttt 45187432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 7129407 - 7129353
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    |||||| |||||||| |||||||||||||| |||||||| | | |||||||||||    
T  7129407 taagaataagacaaaattaaagttgcattggaaattgtgtgagagaaaagttgga 7129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 2067830 - 2067778
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttg 118  Q
    |||| ||||||| || ||||||||||||| ||||||||| | |||||||||||    
T  2067830 taaggaaaagaccaaattaaagttgcattaaaaattgtgtgagtgaaaagttg 2067778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 40299043 - 40298813
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||||||||||||||||  |||  ||||||||||| ||| || | | |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  40299043 aattgcacacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgcccaagaaaaagacaaacttaaagttacattgaaaat 40298944  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaa 200  Q
    |||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||  |||    
T  40298943 tgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa--caa 40298846  T
Q  201 tcttttttcgctaaaatgatactcattatgaaa 233  Q
    | |||||| |||||| ||| ||||||| |||||    
T  40298845 ttttttttggctaaagtgacactcattttgaaa 40298813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 19920231 - 19920424
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||| |||||||||  |||  |||||||||||||||||| | ||||||||||||||| || | |||||||||||||  |||||||||||||||||||    
T  19920231 aattgcatacaaattaaggaatgaaatgaaataatcattagacatgacacttttactaaagtgtccaagaaaaagacaa--ttaaagttgcattgaaaat 19920328  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||| | |||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  19920329 tgtgcgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaat 19920424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 5723173 - 5723009
Alignment:
Q  25 gaatgaaataatcattagatagacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtat 124  Q
    |||| |||||||||||||| |  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | |||||||| ||||||    
T  5723173 gaataaaataatcattagacat-cacttttactaaactgcccaaggaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtat 5723075  T
Q  125 ttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  5723074 ttattgagggtaaagttagga-gaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 33845391 - 33845544
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtat 124  Q
    |||||||||||||||| ||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||     
T  33845391 aatgaaataatcattacatgtaacacttttactaaactgcccaagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaaaagttggagtaa 33845490  T
Q  125 ttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaa 177  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  33845491 ttattgagggtaaagttgggagaaaaataattaaagttctattgaaaatgtaaa 33845544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 17869368 - 17869209
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||||||||||||||||||||||||||| | | |||||| | ||||||||||||||| ||||||||| |||||||||||||||||| ||    
T  17869368 taagaaaaatacaaacttaaagttgcattgaaaattgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcat 17869269  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    || ||||||||| | ||||||||||| |||  |||  ||||||||||||| ||| |||||||    
T  17869268 tggaaatgtaaaatgacattcattttgaaa--caaatttttttcgctaaagtgacactcatt 17869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 34002155 - 34002277
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| || | ||||||||| ||||||    
T  34002155 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtat 34002254  T
Q  166 tgaaaatgtaaagtaacattcat 188  Q
    || ||||||||||| ||||||||    
T  34002255 tggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 42259571 - 42259699
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||||||||| ||||||||||||||||||||| || | |  ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  42259571 taagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaagtttgagtatttattgagggtaaagtt-ggaagaaaaaattaaagttgtat 42259669  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||| ||||| |||||||||||||||||    
T  42259670 tgaaaacgtaaaataacattcattttaaaa 42259699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 19906538 - 19906420
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaat 172  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||| ||||    
T  19906538 aagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaataaaagttgtattggaaat 19906439  T
Q  173 gtaaagtaacattcatttt 191  Q
    ||||||  |||||||||||    
T  19906438 gtaaagcgacattcatttt 19906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 32345856 - 32346024
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||| ||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  32345856 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 32345955  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||  ||||||||||| |||   ||| |||||| ||||||| || ||||||| |||||    
T  32345956 attgaaaatgtaaagcgacattcattttgaaa-caaattttttttggctaaaacgacactcattttgaaa 32346024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 3680877 - 3681074
Alignment:
Q  8 acacaaattaaaaaatagaatgaaataatcattagatagaca-cttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaa 97  Q
    ||||| |||||||||| ||||||||||||||||||| | | | |||||||||||||||          ||||||||||||||| ||||||||||||| ||    
T  3680877 acacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaa 3680976  T
Q  98 aattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||| || | | |||||||| | ||||||||| | ||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||||||    
T  3680977 aattctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 3681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 31416772 - 31416903
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||| ||||||||||||||||||||||| | | ||  ||| ||| |||||||||||||||||||||||| || ||||||||||||||||    
T  31416772 taagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 31416871  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||| | |||||||||||||    
T  31416872 attgaaaatgtaaagtgatattcattttaaaa 31416903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 42044010 - 42044132
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatg 173  Q
    |||| |||||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  42044010 acaatcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatg 42044109  T
Q  174 taaagtaacattcattttaaaat 196  Q
    |||||| ||||| ||||| ||||    
T  42044110 taaagtgacattaattttgaaat 42044132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 1103611 - 1103449
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||| ||||| |||||||| |||||||||||||| | | ||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||| |    
T  1103611 aaaaaaacaaatttaaagttacattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattgga 1103512  T
Q  170 aatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| | ||||||||||| |||   ||| |||| | |||||| ||| |||||||||||||    
T  1103511 aatgtaaaatgacattcattttgaaa-caaattttttctggctaaagtgacactcattatgaaa 1103449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 26963612 - 26963499
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaatt--gtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||||||||||||||||||||  ||| | | |||||||||||||||| ||||||||||||||||| || |||||||||||||||     
T  26963612 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaagaaaaaaattaaagttgc 26963513  T
Q  164 attgaaaatgtaaa 177  Q
    |||| |||||||||    
T  26963512 attggaaatgtaaa 26963499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 41905957 - 41906085
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| |||||||||||||||||||||||   | |||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||    
T  41905957 taagaaaaagacaaaattaaagttgcattgaaaattgtgtaagagaaaagttggagtatttattga-ggtaaagttggaagagaaaacttaaagttgtat 41906055  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |  ||||||||||| ||||| |||||||||    
T  41906056 tagaaatgtaaagtgacatttattttaaaa 41906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 30833119 - 30833246
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||||||||||||| |||| || ||||||||||| | |  ||||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||    
T  30833119 gaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattga 30833218  T
Q  169 aaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||| | | ||||||||||||||    
T  30833219 aaatgtaaaatgatattcattttaaaat 30833246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 18733583 - 18733437
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgg--gaggaaaaaattaaagttgtatt 166  Q
    |||||||||||| ||||||||||||||||| ||||| | |  |||| ||||||||||||||||||||| |||| |  ||  |||||||||||||||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaattggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttgtatt 18733484  T
Q  167 gaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    ||||||||||||| ||||||||||| |||  |||| |||||| ||||||    
T  18733483 gaaaatgtaaagtgacattcattttgaaa--caattttttttggctaaa 18733437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 26527463 - 26527549
Alignment:
Q  110 gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||||||||||||| ||||||| | || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26527463 gaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcattttaaaat 26527549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 39117510 - 39117636
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga-aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    |||||| |||||||||||||||||||||||||||||||| | | || ||| |||||||||| ||||||||||| ||||| || ||| |||||||||||||    
T  39117510 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgttggaagaaaataattaaagttgta 39117609  T
Q  165 ttgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||   |||||||||||    
T  39117610 ttgaaaatgtaaaacgacattcatttt 39117636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 10684851 - 10684978
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||||||||| ||||||||||||| | | ||  ||||||  | |||||||| ||||||||||||| || |||||||||||||||     
T  10684851 taagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttattaagggtaaagttggaagaaaaaaattaaagttgc 10684950  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||| | ||||||||||    
T  10684951 attgaaaatgtaaagcagcattcatttt 10684978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 222
Target Start/End: Complemental strand, 30515106 - 30514950
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaa--gttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||| ||||||||| ||| ||||||||  | | |||||  ||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  30515106 taagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgt 30515007  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatac 222  Q
    |||| ||||||||| | ||||||||||| |||  |||| |||||| ||||||| |||||    
T  30515006 attggaaatgtaaattgacattcattttgaaa--caattttttttggctaaaacgatac 30514950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 36447091 - 36447218
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||| |||||||||||||||||||||||| | | ||  |||||||||||||||| ||||| ||||||||| ||  |||||||||| ||||    
T  36447091 taagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaattaaaattgt 36447190  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||| | |||||||||||    
T  36447191 attgaaaatgtaaaatgacattcatttt 36447218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 28044163 - 28044283
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||| ||||||||||||| | | ||||| ||||||         ||| ||||||||| || ||||||||||||||||||    
T  28044163 taagaaaaagacaaaattaaagttgtattgaaaattgtgtgagagaaaaattggag---------aggataaagttggaagaaaaaaattaaagttgtat 28044253  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||| |||||||||||||||    
T  28044254 tgaaaatgtaaagtgacattcattttaaaa 28044283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 36836184 - 36836065
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaatt--gtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||| ||||||||||||||||||||  ||| | | ||||| ||||||| |||| ||||| ||||||||| || |||||||||||||||||||||||    
T  36836184 aagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgtttactgagg-taaagttggaagaaaaaaattaaagttgtattgaaa 36836086  T
Q  171 atgtaaagtaacattcatttt 191  Q
    ||||||||  |||||||||||    
T  36836085 atgtaaagcgacattcatttt 36836065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 19288414 - 19288535
Alignment:
Q  110 gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttc 209  Q
    |||||||||||| ||||||||||||||||||| | || |||||||||||||||||||  ||||||||||| ||||||||||| ||||  ||| ||||||     
T  19288414 gaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaat--aattttttttt 19288511  T
Q  210 gctaaaatgatactcattatgaaa 233  Q
     ||||| ||| ||||||| |||||    
T  19288512 actaaagtgacactcattttgaaa 19288535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 22627383 - 22627534
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgg--gaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||         ||||||||||||||  ||  |||||||||||||||||||| ||    
T  22627383 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgga---------gagggtaaagttggaagaaaaaaaaattaaagttgtattggaa 22627473  T
Q  171 atgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||||| |||||||||||   |  |||| |||||| | |||||||||||||||| |||||    
T  22627474 atgtaaagtgacattcattttggga--caattttttttagttaaaatgatactcattttgaaa 22627534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 32275400 - 32275170
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcct---------aagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| ||||| ||||  |||||||||||||||| | | |||  ||||||||||||||||         ||||||||  |||||||||||||||    
T  32275400 aattgcacacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgc 32275301  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| |   |||||||| |||         ||||||||||||| || |||||||||||||||||||  |||||||||||  ||||||||||    
T  32275300 attgaaaattgtgtgaaggaaaagtttgag---------agggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcatttt 32275210  T
Q  192 aaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
     |||  |||| |||||| |||||| ||| || |||| |||||    
T  32275209 gaaa--caattttttttagctaaagtgacacacattttgaaa 32275170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 43813430 - 43813496
Alignment:
Q  129 tgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||| || |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  43813430 tgagggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaa 43813496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 36447633 - 36447753
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||| ||||||||| |||||||||| || | | |||||||||||          ||||||||||||| || ||||||||||||||||||    
T  36447633 taagaaaaagataaaattaaagttgaattgaaaattatgtgagagaaaagttggaa---------agggtaaagttggaagaaaaaaattaaagttgtat 36447723  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||| |||||| | |||||||||||||    
T  36447724 tgaaaatataaagtgatattcattttaaaa 36447753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 6521950 - 6521820
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaa--aagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||||| ||| ||||||||||||| | | ||   || || ||||||||||||| ||||||||||  || ||||| ||||| |||     
T  6521950 taagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtatttattgaaggtaaagttgaaagaaaaaatttaaa-ttgc 6521852  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||  | |||||||||||||    
T  6521851 attgaaaatgtaaagcgatattcattttaaaa 6521820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 18886730 - 18886671
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||    
T  18886730 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaa 18886671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 34733440 - 34733356
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaa 152  Q
    ||||||||||||||||||||||||||||||||||||||  | | ||||| |||||||||||||||| || | |||||| || |||||    
T  34733440 taagaaaaagacaaacttaaagttgcattgaaaattgt--gagagaaaaattggagtatttattgaagggagagttggaagaaaaaa 34733356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 22597297 - 22597236
Alignment:
Q  130 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||  || |||||||||||||||||||||||||||||||| |||||||||||    
T  22597297 gaggttaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 22597236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 48838711 - 48838772
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattga 131  Q
    ||||||||||| ||||||||||||||||||||||| | | |||||||| |||||||||||||    
T  48838711 aaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattga 48838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 40207412 - 40207565
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||| |||||||||||| ||||||||||||||||| |   ||||||||| ||         ||| ||||||||  || ||||||||||||||||||    
T  40207412 taagaaaatgacaaacttaaaattgcattgaaaattgtgag---gaaaagttgaag---------aggataaagttgaaagaaaaaaattaaagttgtat 40207499  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    | ||||| |||| | ||||||||||| ||  ||||| |||||| |||||| ||| ||||||| |||||    
T  40207500 taaaaatataaaatgacattcattttgaa--gcaattttttttggctaaagtgacactcattttgaaa 40207565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 42121671 - 42121534
Alignment:
Q  68 agaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtatt 166  Q
    ||||||||| | ||||||||||||||||||||||||  | | ||||||||||||         || |||||||||| || |||||| |||||||||||||    
T  42121671 agaaaaagatacacttaaagttgcattgaaaattgtttgagagaaaagttggag---------agagtaaagttggaagaaaaaaaattaaagttgtatt 42121581  T
Q  167 gaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    | |||| |||||| ||||||||||| |||  |||| |||||| ||||||    
T  42121580 ggaaatataaagtgacattcattttgaaa--caatttttttttgctaaa 42121534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 18886846 - 18886722
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||| | ||| |||| ||||||||||||||||||||| | | ||||||||||||||||         |||| |||||||||| ||||||||||||||    
T  18886846 gcacacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattg 18886747  T
Q  96 aaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||| |   |||||||||||    
T  18886746 aaaattgtgtgaaagaaaagttgga 18886722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 40805073 - 40805025
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttattttaaaat 40805025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 42010597 - 42010651
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    |||||||||||||||||||||||| |||||||||||||  | | |||||||||||    
T  42010597 taagaaaaagacaaacttaaagttacattgaaaattgtatgagagaaaagttgga 42010651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 47272279 - 47272217
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattga 131  Q
    ||||||||||||| |||| ||||||||||||||||| | |  |||||||| ||||||||||||    
T  47272279 gaaaaagacaaacataaaattgcattgaaaattgtgtgaggaaaaagttgaagtatttattga 47272217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 19277074 - 19277105
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtg 104  Q
    ||||||||||||||||||||||||||||||||    
T  19277074 aagacaaacttaaagttgcattgaaaattgtg 19277105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 32873268 - 32873315
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaa 32873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 33056307 - 33056362
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggag 121  Q
    ||||||||||||||| |||||  |||||||||||||||| | | ||||||||||||    
T  33056307 taagaaaaagacaaatttaaaactgcattgaaaattgtgtgagagaaaagttggag 33056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 43749982 - 43749916
Alignment:
Q  125 ttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||| ||| |||||||| ||| ||||||||||| ||||||||||||| || ||| ||||| |||||    
T  43749982 ttattaaggataaagttgagagaaaaaaattaaatttgtattgaaaatatagagtgacattaatttt 43749916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 48838628 - 48838669
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattaga 43  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  48838628 aattgcacacaaattaaggaataaaatgaaataatcattaga 48838669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 29001596 - 29001624
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtg 104  Q
    |||||||||||||||||||||||||||||    
T  29001596 acaaacttaaagttgcattgaaaattgtg 29001624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 31987497 - 31987301
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | | |||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  31987497 taattgcatacaaattaaaaaataaaatgaaataatcattagagataacacttttactaaactgctgaagaaaaagacaaatttaaagttgcattgaaaa 31987398  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    || |||| | |||||||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  31987397 ttatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttaaaat 31987301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 30492921 - 30492732
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa- 99  Q
    |||||||||||||||||  ||| ||||||||||||||||||| | | |||||||||| ||||||| |||||||||||||||||||||||||||| ||||     
T  30492921 aattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgcccaagaaaaagacaaacttaaagttgcattaaaaaa 30492822  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatt 189  Q
    ||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  30492821 ttgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 54092102 - 54091956
Alignment:
Q  49 acttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggagga 148  Q
    |||||||| ||| |||| |||||||||||||||||||| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||||| ||| |    
T  54092102 acttttaccaaattgcccaagaaaaagacaaacttaaaattgtattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttgagagaa 54092003  T
Q  149 aaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||||| ||||| |||| | |||||||||||||||    
T  54092002 aaaaattaaagttgtattaaaaatctaaattgacattcattttaaaa 54091956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 19849211 - 19849082
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  19849211 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 19849112  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    || || |||||||| | |||||||||||||    
T  19849111 tggaattgtaaagtgaaattcattttaaaa 19849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 30022195 - 30022070
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||| ||||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  30022195 taagaaaaagacaaactcaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 30022096  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    || |||||| ||||||||||||||||    
T  30022095 tggaaatgtcaagtaacattcatttt 30022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 47321274 - 47321142
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttg 162  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||| || |||||| |||||||||    
T  47321274 taagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaattaaagttg 47321175  T
Q  163 tattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||||| |||||||||||||||    
T  47321174 tattgaaaatgtaaagtgacattcattttaaaa 47321142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 31941687 - 31941556
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaatt--gtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||  ||| | | ||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  31941687 taagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 31941588  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||| |||||||||||||||    
T  31941587 attgaaaatgtaaagtgacattcattttaaaa 31941556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 29840256 - 29840037
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||||||||||||||||  ||| ||||||||||||||||||| | | ||||||||||||| |||  ||||||||||||||||||||||||              
T  29840256 aattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaaatgctcaagaaaaagacaaacttaaagttg---------- 29840167  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgca 199  Q
      |||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||| |||  ||    
T  29840166 --tgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa--ca 29840071  T
Q  200 atcttttttcgctaaaatgatactcattatgaaa 233  Q
    || |||||| |||||| ||| | ||||| |||||    
T  29840070 attttttttggctaaagtgacagtcattttgaaa 29840037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 45049900 - 45049706
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||| |||||||  |||  |||||||||||||||||| | | ||||||| |||| ||||| || ||||| |||||||||||||||||||||||||    
T  45049900 aattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttcctaagctgcccaa-aaaaatacaaacttaaagttgcattgaaaat 45049802  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||   ||||||| |||||| |||||||| |||||||| |||| ||||||||||| || |||| |||||||||||| ||||| ||||||||||    
T  45049801 tgtgcgaaagaaaagtaggagtacttattgagagtaaagttcggagaaaaaaattaaaattatattaaaaatgtaaagtgacattaattttaaaat 45049706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 44855441 - 44855204
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||||||||| |||||||||||||||||||||  ||| | | ||||||||||||||||         |||| |||||||||| ||||||||||||||    
T  44855441 gcacacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattg 44855342  T
Q  96 aaaattgtgcgtgtgaaaagttggagtatttattgagggtaaag--ttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaa 193  Q
    ||||||||| | | ||||||||||| ||||||||||||||||||  |||| ||  |||| |||||||||||||| ||||||||||| ||||| ||||  |    
T  44855341 aaaattgtgtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttatttcga 44855242  T
Q  194 aatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||  |||| |||||| |||||||||| ||||||| |||||    
T  44855241 aa--caatttttttttgctaaaatgacactcattttgaaa 44855204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 24259740 - 24259613
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||| |||||||||||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  24259740 taagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 24259641  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  24259640 attggaaatgtaaagtgacattcatttt 24259613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 34124424 - 34124293
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||| ||||||||||||| | | ||  |||||| ||||||||||||||||||||||||| || |||||||||||||||     
T  34124424 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 34124325  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||  |||||||||||||||    
T  34124324 attgaaaatgtaaagcgacattcattttaaaa 34124293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 45520483 - 45520612
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||| |||||||||||||||||||||| ||||||||  | | |||||||| ||||||||||  ||| ||||||||| || ||||||||||||||||||    
T  45520483 taagaataagacaaacttaaagttgcattaaaaattgtatgagagaaaagtttgagtatttatcaaggataaagttggaag-aaaaaattaaagttgtat 45520581  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||| ||||||||||||||||    
T  45520582 tgaaaatgtaaagtgacattcattttaaaat 45520612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 17499740 - 17499867
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgt--gcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||||||||||||||||||||||  | | | |||||||| ||||||||||||||||||||||||| || ||||||||||| |||     
T  17499740 taagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattgc 17499839  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||  |||||||||||    
T  17499840 attggaaatgtaaagcgacattcatttt 17499867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 28116374 - 28116207
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||||||||||||| || ||||||||||| ||| ||  |||||| ||||||||||| ||||||||||||| || ||||||||||||||||    
T  28116374 taagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaagaaaaaaattaaagttgt 28116275  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||| ||||||||||| ||||| ||||| ||||  ||| |||||| ||||||  || ||||||| |||||    
T  28116274 attggaaatgtaaagtgacatttattttgaaat--aattttttttggctaaagcgacactcattttgaaa 28116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 37445837 - 37445658
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaag 115  Q
    |||||||||||||||||| | | ||||||||||||||||||         ||||||||||||||| ||||||||||||| |||||| || |   |||||     
T  37445837 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaaaa 37445738  T
Q  116 ttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    || || |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| | |||||||||||||||    
T  37445737 tttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaa 37445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 22212457 - 22212339
Alignment:
Q  77 caaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaa 176  Q
    |||||||||||||| ||||||||||||| | |  ||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||    
T  22212457 caaacttaaagttgtattgaaaattgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaa 22212358  T
Q  177 agtaacattcattttaaaa 195  Q
     || |||||||||||||||    
T  22212357 ggtgacattcattttaaaa 22212339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 29289920 - 29290045
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||||||||| ||||||||||||||||| | | ||||||||| |||||||||||| ||||||||| | || |||||||| |||||||||||||    
T  29289920 aaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaagttgaagtatttattga-ggtaaagtttgaagaaaaaaattgaagttgtattgaa 29290018  T
Q  170 aatgtaaagtaacattcattttaaaat 196  Q
    ||| |||||| ||||| ||||||||||    
T  29290019 aatataaagtgacattaattttaaaat 29290045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 45889692 - 45889580
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||||||||||||||||| | | ||  ||||||||||||||||||||||||||||| || || ||||| ||||||||||    
T  45889692 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaagttaaagttgt 45889593  T
Q  164 attgaaaatgtaa 176  Q
    |||||||||||||    
T  45889592 attgaaaatgtaa 45889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 34096217 - 34096017
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattaga-tagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||||||||||||||  |||||||||||||||||| |  |||||||||||||| ||||         |||||||||||||||||||||||| |    
T  34096217 aattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttc 34096118  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttg-ggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattt 190  Q
    ||||||||||||| | | |||||||| || |||||||||||||||||||||   |  ||||||||||| |||||||  ||||||||| | |||||| |||    
T  34096117 attgaaaattgtgtgagagaaaagtttgaatatttattgagggtaaagttgaaaaaaaaaaaattaaaattgtattagaaatgtaaattgacattcgttt 34096018  T
Q  191 t 191  Q
    |    
T  34096017 t 34096017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 42672590 - 42672404
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||||||||||||  |||| |||||||||||||||||| | | ||||||||||||||| |          ||||||||||||||| |||||||||     
T  42672590 aattgcacacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgt 42672491  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagt 179  Q
    |||||||||||||   | || |||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||    
T  42672490 attgaaaattgtgtaagagagaagttgaagtatttattgagggtaaagttggga-gaaaaaattaaaggtgcattgaaaatataaagt 42672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 35928616 - 35928505
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||||||||| |||||||||||||||||   |  ||| |||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  35928616 taagaaaaagataaacttaaaattgcattgaaaattgtgaaag--aaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 35928519  T
Q  166 tgaaaatgtaaagt 179  Q
    ||||||||||||||    
T  35928518 tgaaaatgtaaagt 35928505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 6510241 - 6510120
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||||||||| || |||| |||||||||   | |||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  6510241 aaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaaagttgtattgaa 6510142  T
Q  170 aatgtaaagtaacattcatttt 191  Q
    ||| |||||| ||||| |||||    
T  6510141 aatataaagtgacatttatttt 6510120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 51434280 - 51434411
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||| ||||| |||||||||||||||||||| | | ||  ||||||  |||||||||||||||||||||| | ||||||||||||||||||     
T  51434280 taagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaaggaaaaaattaaagttgc 51434379  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||  ||||||||||  |||||||||||||||    
T  51434380 attagaaatgtaaagcgacattcattttaaaa 51434411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 52732780 - 52732561
Alignment:
Q  14 attaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaaaattgt 103  Q
    |||||||||| |||||||||||||||| |||| | ||||||||||||||||||         |||| |||||||||| ||||||||||||||||||||||    
T  52732780 attaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgt 52732681  T
Q  104 gcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatc 202  Q
    | | | |||||||||| |         ||||||||||||| || |||||| |||||||||||||| ||||||||||| |||||||||||||||  ||||     
T  52732680 gtgagagaaaagttgggg---------agggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaa--caatt 52732592  T
Q  203 ttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||  ||||| ||| ||||||| |||||    
T  52732591 ttttttaactaaagtgacactcattttgaaa 52732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36805400 - 36805633
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttg 90  Q
    |||||||||||| |||||  |||  |||||||||||||||||| | | |||||||||||||||| |         || ||||||||||||||||||||||    
T  36805400 taattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttg 36805499  T
Q  91 cattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattt 190  Q
     ||||||||||||| | |  ||||||||||||       |||| ||||||||| || |||||||||||||||||||| ||||||||| |||||| |||||    
T  36805500 tattgaaaattgtgtgagaaaaaagttggagt-------gaggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattt 36805592  T
Q  191 taaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||  |||| |||||| ||||||  || ||||||| |||||    
T  36805593 taaaa--caatattttttagctaaagcgacactcattttgaaa 36805633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 6462143 - 6461977
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgt----gtgaaaagttggagtatttattgagg---gtaaagttgggaggaaaaaattaaa 158  Q
    |||||| || |||||||||||||||||||||| |||||| |     |  ||||||| |||||||||||||||   |||||||||| || |||||||||||    
T  6462143 taagaacaaaacaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgagtatttattgaggagggtaaagttggaagaaaaaaattaaa 6462044  T
Q  159 gttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    ||||||||| ||||||||||  ||||||||||| |||  |||| |||||| ||||||| ||||||||||    
T  6462043 gttgtattggaaatgtaaagcgacattcattttgaaa--caatttttttttgctaaaacgatactcatt 6461977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 11835227 - 11835104
Alignment:
Q  71 aaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||| |||||||||||||||||||||||||||  || || ||| | ||||||||||||| |||||| |||  || |||||||||||||| |||| |||    
T  11835227 aaaagataaacttaaagttgcattgaaaattgtg--tgagagaaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaa 11835130  T
Q  171 atgtaaagtaacattcattttaaaat 196  Q
    ||||||||| ||||||||||| ||||    
T  11835129 atgtaaagtgacattcattttgaaat 11835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 34360182 - 34360033
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaag 115  Q
    |||||||||||||||||||| | ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| | | ||||||    
T  34360182 aatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaag 34360083  T
Q  116 ttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgt 174  Q
    |||||         |||||||||||||| || |||||| ||||||||||||||||||||    
T  34360082 ttgga---------gagggtaaagttggaagaaaaaaaataaagttgtattgaaaatgt 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 45903446 - 45903560
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaa 181  Q
    |||||||||||||||||||||   | | |||||||  ||||| || |||||| | ||||||| || |||||||||||||||||||||||||||||||| |    
T  45903446 ttaaagttgcattgaaaattggatgagagaaaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtga 45903545  T
Q  182 cattcattttaaaat 196  Q
    |||||||||| ||||    
T  45903546 cattcattttgaaat 45903560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 4408200 - 4408328
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggagga-aaaaattaaagttg 162  Q
    ||||||||||||||||||||| |||||||||||||  |||| | | |||||||| ||| ||||||||||| |||||| || || | ||||||||||||||    
T  4408200 taagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaagtcggaagaagaaaaattaaagttg 4408299  T
Q  163 tattgaaaatgtaaagtaacattcatttt 191  Q
     ||||| |||||||||  |||||||||||    
T  4408300 cattgagaatgtaaagcgacattcatttt 4408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 55126626 - 55126495
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||||||||||||||||  ||||||||||   | | |||||||| |||||||| || |||||| |||| | ||  |||||||||||||||    
T  55126626 taagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtatttttttagggtagagttagaagagaaaaattaaagttgt 55126527  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| |||| | |||||||||||||||    
T  55126526 attgaaaatttaaaatgacattcattttaaaa 55126495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 19282478 - 19282560
Alignment:
Q  110 gaaaagttggagtatttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| ||||||||||||| ||||||||||| || |||| |||||||||||||||| ||||||||||| |||||||||||    
T  19282478 gaaaagttagagtatttattgaaggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19282560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 50072338 - 50072243
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||  |||| |||||| |||||| ||| ||||||| |||||    
T  50072338 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa--caattttttttggctaaagtgacactcattttgaaa 50072243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 38692536 - 38692464
Alignment:
Q  47 acacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgg 119  Q
    |||||||||||||| | || |||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  38692536 acacttttactaaaatacccaagaaaaagacaaaattaaagttgcattgaaaattgtgcgagagaaaagttgg 38692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 38761857 - 38761977
Alignment:
Q  72 aaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaa 171  Q
    ||||||| |||||||||| | |||||||||||| | |  ||||||||||||||||||||||| ||||||||  |  || |||||||||||| ||||||||    
T  38761857 aaagacacacttaaagttaccttgaaaattgtgagag--aaaagttggagtatttattgaggttaaagttgaaaa-aataaattaaagttgaattgaaaa 38761953  T
Q  172 tgtaaagtaacattcattttaaaa 195  Q
    |||||||| ||| ||||| |||||    
T  38761954 tgtaaagtgacactcattataaaa 38761977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 15501179 - 15501295
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||||||||||||||||| ||||||||| | | ||||||||| ||         || |||| ||||| || ||||||||||||||||||    
T  15501179 taagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaagttgaag---------agagtaatgttggaagaaaaaaattaaagttgtat 15501269  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    || ||||||||||| |||||||||||    
T  15501270 tggaaatgtaaagtgacattcatttt 15501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 17317889 - 17317989
Alignment:
Q  88 ttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattc 186  Q
    ||||||||||||||||| | |  ||||||| ||||||||||||| ||||||||||  ||  |||||||||||||||||||| |||||||| || ||||||    
T  17317889 ttgcattgaaaattgtgtgagataaaagtttgagtatttattgaaggtaaagttgaaagaaaaaaaattaaagttgtattggaaatgtaatgtgacattc 17317988  T
Q  187 a 187  Q
    |    
T  17317989 a 17317989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 3093460 - 3093350
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaa 181  Q
    |||||||||||| | |||||||| | | ||||||||| ||||||||||||   ||||||||| || ||||||  |||||| ||||||||||||||||| |    
T  3093460 ttaaagttgcatcggaaattgtgtgagagaaaagttgaagtatttattgaaa-taaagttgg-agaaaaaaa--aaagttatattgaaaatgtaaagtga 3093365  T
Q  182 cattcattttaaaat 196  Q
    |||||||||||||||    
T  3093364 cattcattttaaaat 3093350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 38692471 - 38692412
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  38692471 aaagttgggagaaaaaaattaaagtttaattgaaaatgtaaagtgacattcattttaaaa 38692412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 43421079 - 43421265
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagatagac-acttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||||||||| |||| |||||||||||||||| |||| |  |||||||||||| |||          ||||||||||||||| ||||||||||||||    
T  43421079 gcacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattg 43421178  T
Q  96 aaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    || |||||| | | |||||  |||||         ||||||||||||| || |||||||||||||||||| | ||||||||||| || ||||||||    
T  43421179 aatattgtgtgagagaaaacctggag---------agggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcatttt 43421265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 54512150 - 54512029
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||| |||||| |||||||||||||||| |||||| | | ||||||||||||         ||| ||||||||| ||  ||||||||||||| |||    
T  54512150 taagaaaatgacaaaattaaagttgcattgaacattgtgtgagagaaaagttggag---------aggataaagttggaagataaaaattaaagttatat 54512060  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    | |||||||||||| | ||||||||||||||    
T  54512059 taaaaatgtaaagtgatattcattttaaaat 54512029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 21045201 - 21045158
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  21045201 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 21045158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 21045260 - 21045206
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||||||    
T  21045260 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga 21045206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 54233945 - 54233907
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54233945 taagaaaaagacaaacttaaagttgcattgaaaattgtg 54233907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 6232116 - 6232184
Alignment:
Q  124 tttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||| ||||||| |||| |||| |||||||||||||||||||||||||| | ||||| |||||    
T  6232116 tttattgaggctaaagttaggagaaaaaaaattaaagttgtattgaaaatgtaaattgacatttatttt 6232184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 32140937 - 32141065
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||| ||||| ||||| |||| ||||||||||||||||||| |  |||||||||||||||||||         |||  ||||||||||| |||| ||||    
T  32140937 aattgtacacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgc 32141036  T
Q  92 attgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||| | | |||||||||||    
T  32141037 attgaaaattgtgtgagagaaaagttgga 32141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 39671131 - 39671183
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttg 118  Q
    ||||||||| ||||||||||||||||||||||||||||| | | |||||||||    
T  39671131 taagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaagttg 39671183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 32141057 - 32141112
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| || |||||||||||||||||||| |||||||||||  ||||||||||    
T  32141057 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcatttt 32141112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 56556360 - 56556403
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  56556360 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 56556403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 1868208 - 1868286
Alignment:
Q  151 aaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaa 232  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||  |||| ||||||  ||||| ||| ||||||||||||    
T  1868208 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaa--caat-ttttttgactaaagtgacactcattatgaa 1868286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 44835414 - 44835348
Alignment:
Q  114 agttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaaaatgtaaagt 179  Q
    ||||||| || ||||||||||||||||| ||| ||||||| |||||||||||||  |||||||||||    
T  44835414 agttggactagttattgagggtaaagtttggaagaaaaaaattaaagttgtattcgaaatgtaaagt 44835348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 51930703 - 51930649
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    |||||||| |||||| ||||||||||||||||||||||| | | |||||||||||    
T  51930703 taagaaaatgacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga 51930649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 54233892 - 54233843
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||||||||||||||||||||||||   |||||||||| ||||    
T  54233892 gaaaaaattaaagttgtattgaaaatgtaaagcggcattcattttgaaat 54233843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 55548249 - 55548361
Alignment:
Q  72 aaagacaaacttaaagttgcattgaaaattgtgcgtgtga----aaagttggagtat--ttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||||||||||||||||||| |||||||| | | ||    ||| ||| |||||  |||||||||| |||||||| |  || |||||||||||| ||    
T  55548249 aaagacaaacttaaagttgcattggaaattgtgagagagagagaaaaattgaagtatatttattgagggcaaagttggaaa-aagaaattaaagttgcat 55548347  T
Q  166 tgaaaatgtaaagt 179  Q
    ||||||||||||||    
T  55548348 tgaaaatgtaaagt 55548361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 34534115 - 34534154
Alignment:
Q  66 taagaaaaagacaaactt-aaagttgcattgaaaattgtg 104  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34534115 taagaaaaagacaaacttaaaagttgcattgaaaattgtg 34534154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 51930657 - 51930602
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| || ||||||||||| |||||||| ||||||||||  |||||||||||    
T  51930657 aaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcatttt 51930602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 31817229 - 31817279
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||| ||||| ||||||||||||||||||||||| | | |||||||||||    
T  31817229 aaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga 31817279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 32141163 - 32141191
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcatt 94  Q
    |||||||||||||||||||||||||||||    
T  32141163 taagaaaaagacaaacttaaagttgcatt 32141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 39671187 - 39671231
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||||||||| |||||||||   |||||||||||    
T  39671187 gaaaaaattaaagttgtattggaaatgtaaaacgacattcatttt 39671231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 38982102 - 38982332
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattaga--tagacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    |||||||||||||||||  |||  |||||||||||| | |||  || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  38982102 aattgcacacaaattaaggaatgaaatgaaataatcttaagacgta-acacttttattaaactgcccaagaaaaagacaaacttaaagttgcattgaaaa 38982200  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgca 199  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  ||    
T  38982201 ttgtgcgagagaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaa--ca 38982298  T
Q  200 atcttttttcgctaaaatgatactcattatgaaa 233  Q
    || |||||| |||||| ||| |||||||||||||    
T  38982299 attttttttagctaaagtgacactcattatgaaa 38982332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 4371556 - 4371369
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||    |||||||||||||||    
T  4371556 taattgcacacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaactgcctaagaaaaagacaaa----aagttgcattgaaaa 4371461  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||| | | |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||||||    
T  4371460 ttgtgtgagagaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcatttt 4371369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 166597 - 166836
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| |||||  |||  |||||||||||||||||| | | ||||||||||||||||||         || |||||||||||||||||||||||    
T  166597 aattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatgaaaaagacaaacttaaagttgc 166696  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| | |  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  166697 attgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 166796  T
Q  192 aaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
     |||  |||| |||||| ||||||  || ||||||| |||||    
T  166797 gaaa--caatttttttttgctaaagcgacactcattttgaaa 166836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 28640227 - 28640083
Alignment:
Q  51 ttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaa 150  Q
    |||||||||| |||| || ||||||||||||||||||||| |||||||||||| || | ||||||||| ||||||||||||||||||||||||||| |||    
T  28640227 ttttactaaattgcccaa-aaaaagacaaacttaaagttgtattgaaaattgttcgagagaaaagttgaagtatttattgagggtaaagttgggagaaaa 28640129  T
Q  151 aaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  28640128 aaattaaagttgaattgaaaatgtaaagtgacatttattttaaaat 28640083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 13066909 - 13066719
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||| |||||||||  |||  |||||||||||||||||| | | ||||||||||||||||   ||||||| || |||  ||||||||||||||||||    
T  13066909 aattgcatacaaattaaggaatgaaatgaaataatcattagacacaacacttttactaaactggtcaagaaaaggaaaaatctaaagttgcattgaaaat 13066810  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||  | |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||| | |||||||||||    
T  13066809 tgtgcaagagaaaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcatttt 13066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 32690749 - 32690883
Alignment:
Q  62 tgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagtt 161  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  32690749 tgcctaagaaaaagacaaacctaaagttgcattgaaaattgtgcgagagaaaagttgaagtatttattgagagtaaagttgagagaaaaaaattaaagtt 32690848  T
Q  162 gtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||  ||||||||||| ||||||||||| ||||    
T  32690849 gtatttgaaatgtaaagtgacattcattttgaaat 32690883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 36660556 - 36660393
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||| ||  ||||||||| | |  ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  36660556 taagaaaaagacaaacttaaagttgtataaaaaattgtgagag--aaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 36660459  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||| ||||||||||| |||  |||| |||||| |||||| ||| ||||||| |||||    
T  36660458 tgaaaatgtaaagtgacattcattttgaaa--caattttttttggctaaagtgacactcattttgaaa 36660393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 33585002 - 33585162
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgt--gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||||||||||||||||||||||||||| | |   |||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  33585002 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaa 33585101  T
Q  171 atgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||||| || ||||||||||||  |||| ||||||  ||||| ||| ||||||| |||||    
T  33585102 atgtaaagtgacgttcattttaaaa--caattttttttatctaaagtgacactcattttgaaa 33585162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 4833657 - 4833802
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgt--gtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattg 167  Q
    ||||||||||||||||||||||||||||||||||| |   | |||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  4833657 aaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattg 4833756  T
Q  168 aaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    ||||||||||| |||||||||||| |||  |||| |||||| ||||||    
T  4833757 aaaatgtaaagcaacattcattttgaaa--caatttttttttgctaaa 4833802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 34171294 - 34171166
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||| ||||||||||||||||||||||||||||| || | | |||||||| ||||||||||||| ||||||||| |||  ||||||||||||||||||    
T  34171294 taagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagtt-ggaaaaaaaaattaaagttgtat 34171196  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||| |||||||||||||||    
T  34171195 tgaaaatgtaaagtgacattcattttaaaa 34171166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 12992258 - 12992070
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||| |||||||||  |||  |||||||||||||||||| | | ||||||||||||||||   ||||||| || |||  ||||||||||||||||||    
T  12992258 aattgcatacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaactggtcaagaaaaggaaaaatctaaagttgcattgaaaat 12992159  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||  | |||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||  ||||||||| | |||||||||||    
T  12992158 tgtgcaagagaaaagttggagtatttattgaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcatttt 12992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 42329566 - 42329693
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||||| | | ||  ||||||| |||||||||| ||||||||||||| || ||||||||||||||||    
T  42329566 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaattaaagttgt 42329665  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  42329666 attggaaatgtaaagtgacattcatttt 42329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 33822523 - 33822690
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||||| | | ||  ||||||| |||||||||||| ||||||||||  || | ||||||||||||||    
T  33822523 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaattaaagttgt 33822622  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||| ||||||||||| ||   |||| ||||||  ||||| ||||||||||| |||||    
T  33822623 attgaaaatgtaaagtgacattcattttgaa--tcaattttttttgactaaagtgatactcattttgaaa 33822690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 39059933 - 39059812
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||| ||||||||||||||||||||||||||||  | |  |||| |||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  39059933 gaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaatttggagtatttattgagggtaaagttagaag-aaaaaattaaagttgtattga 39059835  T
Q  169 aaatgtaaagtaacattcatttt 191  Q
    |||||||||| ||||||||||||    
T  39059834 aaatgtaaagcaacattcatttt 39059812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 793626 - 793753
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||||| | | ||  ||||||  ||||||||||||||||| |||||| || ||||||||||||||||    
T  793626 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaattaaagttgt 793725  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  793726 attggaaatgtaaagtgacattcatttt 793753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 15400373 - 15400174
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc----------taagaaaaagacaaacttaaagttgcatt 94  Q
    ||||||| |||||||||| |||||||||||| |||||||| | ||||||||||||| | ||          ||||||||||  |||||||||||| ||||    
T  15400373 gcacacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcatt 15400274  T
Q  95 gaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaa 194  Q
    | |||||||  | | |||||||| ||||||||||||||| ||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||||||    
T  15400273 ggaaattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 27810473 - 27810352
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||| ||| ||||||||| ||||||||||||| | |  ||||||| ||||||||||||||| ||||||||  || ||||||||||||||||||||||    
T  27810473 aaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaa 27810374  T
Q  170 aatgtaaagtaacattcatttt 191  Q
    |||||||||| |||||||||||    
T  27810373 aatgtaaagtgacattcatttt 27810352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 29653534 - 29653661
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||||||||||||||||||  |||||||| | | ||  |||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  29653534 taagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 29653633  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||| | |||||||||||    
T  29653634 attggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 33741596 - 33741431
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| |||||||||||||||||| |||||||| |   |||||||| |||||| |||| ||||||||||| | || ||||||| ||||||| ||    
T  33741596 taagaaaaagataaacttaaagttgcattggaaattgtgtggtagaaaagttagagtatatattaagggtaaagtttgaagaaaaaaatgaaagttgcat 33741497  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||| |||||||| || |||  |||| |||||| |||||||||| ||| ||| |||||    
T  33741496 tgaaaatgtaaagtgacattcatattgaaa--caattttttttagctaaaatgacactgattctgaaa 33741431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 4742291 - 4742414
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattg 167  Q
    |||||| ||||||||||||||| ||||||||||||| | |  ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||     
T  4742291 gaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtatta 4742390  T
Q  168 aaaatgtaaagtaacattcatttt 191  Q
     |||| |||||| |||||||||||    
T  4742391 gaaatataaagtgacattcatttt 4742414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 4751555 - 4751678
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattg 167  Q
    |||||| ||||||||||||||| ||||||||||||| | |  ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||     
T  4751555 gaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtatta 4751654  T
Q  168 aaaatgtaaagtaacattcatttt 191  Q
     |||| |||||| |||||||||||    
T  4751655 gaaatataaagtgacattcatttt 4751678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 36783483 - 36783361
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||||||||| ||||||||||||||||||||||| | | |||||||||||| ||||| | ||||||||||| | || ||||||||| ||||||||||     
T  36783483 gaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattgg 36783384  T
Q  169 aaatgtaaagtaacattcatttt 191  Q
    ||||||||||| ||||| |||||    
T  36783383 aaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 14980003 - 14980186
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||| ||||| |||| |||||||||||||||| |||| | ||||||||| ||||||||         ||||||||||||||| ||||||||||||||    
T  14980003 gcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 14980102  T
Q  96 aaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||| |    |||||||||||         ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14980103 aaaattgtgaga---aaaagttggag---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 14980186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 31557363 - 31557482
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||| |||      |||||||||   ||||||||| || ||||||||||||||||||    
T  31557363 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaatagt------atttattgaaaataaagttggaagaaaaaaattaaagttgtat 31557456  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||| | |||||||||||    
T  31557457 tgaaaatgtaaaatgacattcatttt 31557482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 17674320 - 17674214
Alignment:
Q  85 aagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacat 184  Q
    |||||| || |||||||||| | | ||||||||| |||||||||||||| ||||||| |  | |||||||||||||| ||||||||| ||||||| ||||    
T  17674320 aagttgtatagaaaattgtgtgagagaaaagttgaagtatttattgaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacat 17674221  T
Q  185 tcatttt 191  Q
    |||||||    
T  17674220 tcatttt 17674214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 29044851 - 29044746
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgt-gtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    |||||| |||| ||||||||||||||||||||||||||| |  | |||||||| ||| ||||||||||| ||||||||| || |||||||||||| || |    
T  29044851 taagaataagataaacttaaagttgcattgaaaattgtgtggagagaaaagtttgagcatttattgaggataaagttggaagaaaaaaattaaagctgga 29044752  T
Q  165 ttgaaa 170  Q
    ||||||    
T  29044751 ttgaaa 29044746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 43257808 - 43258003
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| |||||| |||  |||||||||||||||||| | | ||||| ||||||||||||         ||||||| ||||||||||||||||||    
T  43257808 aattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgc 43257907  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| | |  || ||||| ||         ||| ||||||||  || |||||||||||||| ||||| ||||||||||| |||||||||||    
T  43257908 attgaaaattgtgtgagaaaacagttgaag---------aggataaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12167557 - 12167688
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattaga-tagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttg 90  Q
    |||||||||||||||||| |||| |||||||||||||||||||  | |||||||||||||||||||         |||||||| | ||||||||||||||    
T  12167557 taattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttg 12167656  T
Q  91 cattgaaaa-ttgtgcgtgtgaaaagttggag 121  Q
    ||||||||| ||||| | | ||||||||||||    
T  12167657 cattgaaaatttgtgtgagagaaaagttggag 12167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 27652341 - 27652419
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgtgtgaaaagttggagtatttattgagggtaaagttg 142  Q
    ||||||||||||||| |||||||||||||||||||  |||| | | ||||||||||| |||||||||||||||||||||    
T  27652341 taagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 7731663 - 7731744
Alignment:
Q  114 agttggagtatttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||||||| ||||||| | || |||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  7731663 agttggagtatttattgagg-taaagtttgaagaaaaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaa 7731744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 16886195 - 16886086
Alignment:
Q  78 aaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaa 177  Q
    ||||||||||||||||||||||||||| |   ||||||||||||         ||||||||||||| || |||||||||||||||||||||||||| |||    
T  16886195 aaacttaaagttgcattgaaaattgtgtgatagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaa 16886105  T
Q  178 gtaacattcattttaaaat 196  Q
    |  || |||||||| ||||    
T  16886104 gcgacgttcattttgaaat 16886086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 36296161 - 36296283
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||||||||||||||||||||||||||| | | ||  ||||||||||| ||||  | |  ||||||||| |  |||||||||||||||||||| ||    
T  36296161 aagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagttggagtgtttaccgggaataaagttggaa--aaaaaattaaagttgtattggaa 36296258  T
Q  171 atgtaaagtaacattcattttaaaa 195  Q
    ||| ||||  | |||||||||||||    
T  36296259 atggaaagcgatattcattttaaaa 36296283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 32963030 - 32963142
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgt--gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||||| |||||||| |||||||  |     |||||||| ||||||||||||||||||||||| | |  |||||| |||||||||    
T  32963030 taagaaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttattgagggtaaagtttgaa--aaaaaaataaagttgt 32963126  T
Q  164 attgaaaatgtaaagt 179  Q
    |||| |||||||||||    
T  32963127 attggaaatgtaaagt 32963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 41566930 - 41566861
Alignment:
Q  51 ttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||||| | || | |||||||||||    
T  41566930 ttttactaaactgtcaaagaaaatgacaaacttaaagttgcattgaaaattatacgagagaaaagttgga 41566861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 4011728 - 4011822
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| || |||||||||||||||||| | ||||||||||| || ||||||||||||  |||| |||||| |||||| ||| ||||||| |||||    
T  4011728 aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaa--caat-ttttttagctaaagtgacactcattttgaaa 4011822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 31889850 - 31889796
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||||||    
T  31889850 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga 31889796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 41845386 - 41845434
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  41845386 aaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaat 41845434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 7388286 - 7388332
Alignment:
Q  149 aaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||    
T  7388286 aaaaattaaaattgtattgaaaatataaagtgacattcattttaaaa 7388332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 12167693 - 12167733
Alignment:
Q  155 taaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaa 12167733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 31889791 - 31889714
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||| |||  |||| ||||||  ||||| ||| |||||||    
T  31889791 aaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaa--caatttttttttactaaagtgacactcatt 31889714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 33693804 - 33693741
Alignment:
Q  133 ggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||| |||| || |||||||||||||  |||| |||||||||||| ||||| ||||||||||    
T  33693804 ggtaaaattggaagaaaaaaattaaagtgatattaaaaatgtaaagtgacatttattttaaaat 33693741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 4011682 - 4011720
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  4011682 taagaaaaagataaaattaaagttgcattgaaaattgtg 4011720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 7388214 - 7388252
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  7388214 taagaaaaagataaatttaaagttgcattgaaaattgtg 7388252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 29051620 - 29051664
Alignment:
Q  152 aattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||||  ||| ||||||| ||||||||||||||||    
T  29051620 aattaaagttgtattagaaaggtaaagtgacattcattttaaaat 29051664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 5e-63; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 3000924 - 3000754
Alignment:
Q  26 aatgaaataatcattagatagacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatt 125  Q
    |||||||||| ||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||    
T  3000924 aatgaaataaacattagacaaacacttttactaaactgcccaagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatt 3000825  T
Q  126 tattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3000824 tattgagggtagagttgggagaaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 3000754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 4392100 - 4391906
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||| ||||||||| ||||  ||||||||||| |||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4392100 aattgcatacaaattaagaaatgaaatgaaataattattagacataacacttttactaaactgcccaagaaaaagacaaacttaaagttgcattgaaaat 4392001  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||| | |||||||||||||    
T  4392000 tgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaatgtaaagtgatattcattttaaaa 4391906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 35099323 - 35099499
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||||||||||| |||   |||||||||||||||||| | | ||||||||||| |||||  |||||||||||||||||||| |||||||||||||    
T  35099323 aattgcacacaaattaagaaacgaaatgaaataatcattagacataacacttttactatactgctcaagaaaaagacaaacttaaaattgcattgaaaat 35099422  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaa 177  Q
    |||||| | |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  35099423 tgtgcgagagaaaagtttgagtatttattaagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaa 35099499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 647540 - 647725
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| ||||| ||||  |||||||||||||||||||| | || |||||||||||||||         ||||||||||||||||||||||||||    
T  647540 aattgcacacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgc 647639  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaa 177  Q
    |||||||||| ||   | |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  647640 attgaaaattctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaa 647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 37225617 - 37225776
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||| | ||||||||||||||||||||||| || ||| ||||||||||||||    
T  37225617 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtat 37225716  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    || ||||||||||| ||||||||||| |||  |||| |||||| ||||||| || |||||||    
T  37225717 tggaaatgtaaagtgacattcattttgaaa--caattttttttagctaaaacgacactcatt 37225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 8 - 191
Target Start/End: Complemental strand, 38457659 - 38457466
Alignment:
Q  8 acacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaa 97  Q
    ||||||||||| |||| ||||||||||||||||| | | | ||||||||||||||||||         | ||||||||| ||||||||| ||||||||||    
T  38457659 acacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaa 38457560  T
Q  98 aattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||| | | ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| | | |||||||||    
T  38457559 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcatttt 38457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 83500 - 83302
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||||||||||||  |||  |||||| ||||||||||| | | ||||||||||||||| ||         ||||||||||||||||||||||||||    
T  83500 aattgcacacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgc 83401  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||| | | | |||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  83400 attgaaaattgcgtgagagaaaagttagagtatttaatgagggtaaagtt-ggaagaaaaaattaaagttgtattgaaaatgtaaaatgacattcatttt 83302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 15514707 - 15514877
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtat 124  Q
    |||||||||||||||||| | | || |||||||||  |||| ||||||| ||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  15514707 aatgaaataatcattagacataacaattttactaatttgcccaagaaaa-gacaaacttaaagttgcattgaaaattatgcgagagaaaagttggagtat 15514805  T
Q  125 ttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
     |||||| ||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| |||| ||||    
T  15514806 ctattgaaggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttgaaaa 15514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 46363032 - 46363158
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgta 164  Q
    ||||||||| ||||| |||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  46363032 taagaaaaatacaaatttaaagttgcattgtaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgta 46363131  T
Q  165 ttgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||| |||||||||||    
T  46363132 ttgaaaatgtaaagtgacattcatttt 46363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 54933225 - 54933352
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||| |||||||||||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  54933225 taagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 54933324  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  54933325 attggaaatgtaaagtgacattcatttt 54933352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 44854518 - 44854321
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgca 92  Q
    ||||||||| | |||||  ||| ||||||||||||||||||| | |||||||||||||||||||         ||||||||| |||||||||||||||||    
T  44854518 aattgcacatagattaatgaattgaatgaaataatcattagaca-acacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgca 44854420  T
Q  93 ttgaaaattgtgc-gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||| | | | ||||||||||||||||||||||||||||| || ||| |||||| ||||| |||||||||||||||||||| || ||||||||    
T  44854419 ttgaaaattgtactgagagaaaagttggagtatttattgagggtaaaatt-ggaagaaaaagttaaaattgtattgaaaatgtaaagtgacgttcatttt 44854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 25722482 - 25722648
Alignment:
Q  67 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    ||||| |||||||||||||||||||||||||||||||| | | ||  |||||||||||||||||| ||||||||||  | || |||||||||||||||||    
T  25722482 aagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagtatgaagaaaaaaattaaagttgta 25722581  T
Q  165 ttgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||||||||||| ||||||||||| ||||  ||| |||||| ||||||  || ||||||| |||||    
T  25722582 ttgaaaatgtaaagtgacattcattttgaaat--aattttttttggctaaagcgacactcattttgaaa 25722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 2988630 - 2988756
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  2988630 taagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaa-ttgt 2988728  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  2988729 attggaaatgtaaagtgacattcatttt 2988756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 32303925 - 32304056
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||| ||||||||||| || |||||||||||||   | | |||||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  32303925 taagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 32304024  T
Q  164 attgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||| |||||||||| ||||    
T  32304025 attgaaaatgtaaagtgacattcatttcaaaa 32304056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 36310210 - 36310397
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatagacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaatt 101  Q
    ||||| |||||||||||| ||| |||||||| ||||||||||   ||| |||||||||| |||  |||||||| ||||||   |||||||||||||||||    
T  36310210 aattgtacacaaattaaagaatggaatgaaacaatcattagactaacatttttactaaattgctcaagaaaaatacaaac---aagttgcattgaaaatt 36310306  T
Q  102 gtgcgtgtgaaaagttggagtattt-attgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||| | ||||| || |||||||| ||||| |||||||||||||| |||||| ||||||||||||| ||||||||| | ||||| |||||    
T  36310307 gtgcgagagaaaaatttgagtattttattgaaggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttatttt 36310397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 26965461 - 26965680
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattga 96  Q
    |||||| ||||| ||||| ||||||||||||||| |||| | | ||||||||||||||||         ||||||||||||||| |||||||||||||||    
T  26965461 cacacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 26965560  T
Q  97 aaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||| | | ||||||||||||         ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||     
T  26965561 aaattgtgtgagagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa- 26965650  T
Q  197 gcaatcttttttcgctaaaatgatactcatt 227  Q
     |||| |||||| |||||| ||| |||||||    
T  26965651 -caatattttttggctaaagtgacactcatt 26965680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 54261548 - 54261381
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||| ||||||||||||| | | ||  |||||| ||||||||||||||||||||||||| || |||||||||||||||     
T  54261548 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 54261449  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||  || |||||||| |||  |||| |||||| ||||||| || ||||||| |||||    
T  54261448 attgaaaatgtaaagcgacgttcattttgaaa--caattttttttggctaaaacgacactcattttgaaa 54261381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 43580684 - 43580481
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc-----------taagaaaaagacaaacttaaagtt 89  Q
    ||||||||||| |||||  ||||||||||||||||||||| ||| | || |||||||||||||||           || |||||||||||| ||||||||    
T  43580684 aattgcacacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaagtt 43580585  T
Q  90 gcattgaaaattgtgcgtg-tgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattca 187  Q
    ||||||||||||||| | |   ||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||| |    
T  43580584 gcattgaaaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattta 43580485  T
Q  188 tttt 191  Q
    ||||    
T  43580484 tttt 43580481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 1340951 - 1341072
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||         ||||||| ||||| || ||||||||||||||||||    
T  1340951 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttggag---------agggtaacgttggaagaaaaaaattaaagttgtat 1341041  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||| ||||||||||||||||    
T  1341042 tgaaaatgtaaagtgacattcattttaaaat 1341072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 20512516 - 20512683
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttg 162  Q
    ||||||||| ||||||||||||||| ||||||||||||| | | ||  |||||||||||||||||||| ||||||||||| || |||||| |||||||||    
T  20512516 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttg 20512615  T
Q  163 tattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
     |||||||||||||||  ||||||||||| |||  |||| |||||| ||||||| || ||||||| |||||    
T  20512616 cattgaaaatgtaaagcgacattcattttgaaa--caat-ttttttggctaaaacgacactcattttgaaa 20512683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 44645468 - 44645305
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtatt 166  Q
    |||||||| |||||||||||||||||||||||| ||   | | |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||     
T  44645468 gaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcatg 44645369  T
Q  167 gaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    | ||||||||||  ||||||||||| ||||  ||| |||||| ||||||| || ||||||| |||||    
T  44645368 ggaaatgtaaagcgacattcattttgaaat--aat-tttttttgctaaaacgacactcattttgaaa 44645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 2568034 - 2568154
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||| || ||          ||||||||||||| || ||||||||||||||||||    
T  2568034 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaattagaa---------agggtaaagttggaagaaaaaaattaaagttgtat 2568124  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||||||||||||||||||    
T  2568125 tgaaaatgtaaagtaacattcattttaaaa 2568154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 5244716 - 5244588
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| |||||||||||||||||||||||||  || | | ||||| || ||||||||||||||||||||||| |||  |||||||||||||| |||    
T  5244716 taagaaaaaaacaaacttaaagttgcattgaaaataatgtgagagaaaaattagagtatttattgagggtaaagtt-ggataaaaaaattaaagttatat 5244618  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    | ||||||||| || |||||||||||||||    
T  5244617 taaaaatgtaaggtgacattcattttaaaa 5244588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 27027860 - 27027739
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||| ||| ||||||| | || ||||||||||| |||||||| |    
T  27027860 aaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattgga 27027761  T
Q  170 aatgtaaagtaacattcatttt 191  Q
    |||||||| | ||||| |||||    
T  27027760 aatgtaaattgacattaatttt 27027739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 43169467 - 43169340
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||| ||||||||||||| | | ||  |||||| ||||||||||||| ||||||||| | || ||||||||||||||||    
T  43169467 taagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaattaaagttgt 43169368  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||| | |||||||||||    
T  43169367 attggaaatgtaaaatgacattcatttt 43169340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 43687903 - 43688073
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggag---gaaaaaattaaagt 160  Q
    |||||| |||||||| |||||||| |||||||||||||| | | ||  |||||||||||||||||||||||||||||||| ||    |||||||||||||    
T  43687903 taagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaaaattaaagt 43688002  T
Q  161 tgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||| ||||||||||| ||||| |||||  ||  |||| |||||| ||||||| || ||||||| |||||    
T  43688003 tgtattggaaatgtaaagtgacatttattttggaa--caatttttttttgctaaaacgacactcattttgaaa 43688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 50420379 - 50420265
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 175  Q
    ||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||  |||||||| ||| |||||||||||||||||||| ||||||||    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgagagaaaagttagagtatttattgaaagtaaagtt-ggaagaaaaaattaaagttgtattaaaaatgta 50420281  T
Q  176 aagtaacattcatttt 191  Q
    || | ||||| |||||    
T  50420280 aaatgacatttatttt 50420265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 27483142 - 27483331
Alignment:
Q  3 attgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgca 92  Q
    ||||||||||||||||  |||  |||||||||||||||||| | | ||||||||||||| | ||         |||||||||||||||||||||||||||    
T  27483142 attgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgca 27483241  T
Q  93 ttgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||| || | | ||||||||||||         ||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  27483242 ttgaaaattatgtgagagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 27483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 49470923 - 49470773
Alignment:
Q  65 ctaagaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttg 162  Q
    ||||||| ||||||||||||||| ||||||||||||||||   | | ||||||||||||||||||||| || |||| ||||  | |||||||||||||||    
T  49470923 ctaagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttg 49470824  T
Q  163 tattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    |||||||||||||||   ||||||||||| |||  |||| |||||| ||||||    
T  49470823 tattgaaaatgtaaaacgacattcattttgaaa--caatttttttttgctaaa 49470773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 16240771 - 16240654
Alignment:
Q  3 attgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaatt 101  Q
    |||||||||||||||   |||  |||||||||||||||||| | | || ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  16240771 attgcacacaaattagggaatgaaatgaaataatcattagacataacatttttactaaacagcccaagaaaaagacaaacttaaagttgcattgaaaatt 16240672  T
Q  102 gtgcgtgtgaaaagttgg 119  Q
    ||||| | ||||||||||    
T  16240671 gtgcgagagaaaagttgg 16240654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 36541617 - 36541497
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    ||||||||||||||||||||| |||||||||| | | ||  ||||||||| |||||||||||||||||||||| || || ||| ||||||||||||||||    
T  36541617 aagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaataaagtaaagttgtattgaaa 36541518  T
Q  171 atgtaaagtaacattcatttt 191  Q
    |||||||   |||||||||||    
T  36541517 atgtaaaacgacattcatttt 36541497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 36771598 - 36771718
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||||||         |||| ||||||||  || ||||||||||||||||||    
T  36771598 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgga---------gaggataaagttgaaagtaaaaaattaaagttgtat 36771688  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    || ||||||||||| |||||||||||||||    
T  36771689 tgtaaatgtaaagtgacattcattttaaaa 36771718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 41287198 - 41287042
Alignment:
Q  77 caaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaa--ttaaagttgtattgaaaatgt 174  Q
    |||||||||||||||||||||||||||| | |  ||  ||| |||||||||||||||| |||||||| || ||||||  |||||||||||||| ||||||    
T  41287198 caaacttaaagttgcattgaaaattgtgtgagaaaatggtttgagtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgt 41287099  T
Q  175 aaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||| |||| |||||||||||  ||| |||||| ||||||  || ||||||| |||||    
T  41287098 aaagtgacatccattttaaaat--aattttttttagctaaagcgacactcattttgaaa 41287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 22731063 - 22730927
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcatt-------gaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaa 158  Q
    |||||||||||||||||||||||| ||||       |||| ||||| | | |||||||| ||||||||||||| ||||||||||| || |||||||||||    
T  22731063 taagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaa 22730964  T
Q  159 gttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| ||||||||| | ||||||| |||||||    
T  22730963 gttgtattggaaatgtaaattgacattcagtttaaaa 22730927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 34059996 - 34059878
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||         ||||||||||||  || ||||||||||||||||||    
T  34059996 taagaaaaagacaa--ttaaagttgcattgaaaattgtgcgagagaaaagttggag---------agggtaaagttgaaagaaaaaaattaaagttgtat 34059908  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||| | |||||||||||||||    
T  34059907 tgaaaatgtaaaatgacattcattttaaaa 34059878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 43600218 - 43600342
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    |||| |||||| ||||||||  |||| |||||||| | | ||||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  43600218 aaaatgacaaatttaaagttatattggaaattgtgtgagagaaaagtag-agtatttattgagggtaaagttggaag-aaaaaattaaaattgtattgaa 43600315  T
Q  170 aatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||||| ||||| ||||    
T  43600316 aatgtaaagtaacatttattttgaaat 43600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 51381853 - 51381727
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga----aaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgta 164  Q
    ||||||||||||||||||||||||||||||||||| | | ||    ||| ||||||||||||| |||||||||||| | || |||||| |||||||||||    
T  51381853 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaaaaattaaagttgta 51381754  T
Q  165 ttgaaaatgtaaagtaacattcatttt 191  Q
    ||| ||||||||||| ||||| |||||    
T  51381753 ttgtaaatgtaaagtgacatttatttt 51381727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 22414880 - 22414756
Alignment:
Q  71 aaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaa 169  Q
    |||||| |||||||||||||||||||||||||||  |  || ||| | ||||||||||||| ||||||||||| || |||||| |||||||| |||| ||    
T  22414880 aaaagagaaacttaaagttgcattgaaaattgtg--taagagaaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaa 22414783  T
Q  170 aatgtaaagtaacattcattttaaaat 196  Q
    |||||||||| ||||||||||| ||||    
T  22414782 aatgtaaagtgacattcattttgaaat 22414756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 25061816 - 25061671
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 175  Q
    ||||||||||||||||||||||||||||  | | ||||||||||||         || ||||||||||||| |||||||||||||||||||| |||||||    
T  25061816 acaaacttaaagttgcattgaaaattgtatgagagaaaagttggag---------agagtaaagttgggagaaaaaaattaaagttgtattggaaatgta 25061726  T
Q  176 aagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||  ||||||||||||||  |||| |||||| |||||| ||| ||||||| |||||    
T  25061725 aagtggcattcattttaaaa--caat-ttttttggctaaagtgacactcattttgaaa 25061671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 19552662 - 19552542
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||| |||||||||||||||||||| || | | |||||||| |||         ||||||||||||| || ||||| ||||||||||||    
T  19552662 taagaaaaatacaaaattaaagttgcattgaaaattctgtgagagaaaagttagag---------agggtaaagttggaagaaaaaatttaaagttgtat 19552572  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||| |||||||||||||||    
T  19552571 tgaaaatgtaaagtgacattcattttaaaa 19552542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 27039454 - 27039347
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||| ||||||||||||||||||||||| | | | |||||||||||||||||| ||  ||||||||  |  ||||||||||| ||||| ||||    
T  27039454 aaaaagacaaatttaaagttgcattgaaaattgtgtgagaggaaagttggagtatttattaagaataaagttgaaaaaaaaaaattaaatttgtaatgaa 27039355  T
Q  170 aatgtaaa 177  Q
    ||||||||    
T  27039354 aatgtaaa 27039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 53560797 - 53560685
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||||| ||||||||||||||||||||  |||| | | |||||||| |||| ||||| |||| ||||||| ||| ||||||||||||||||     
T  53560797 taagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagtt-ggaagaaaaaattaaagttgc 53560699  T
Q  164 attgaaaatgtaaa 177  Q
    |||| |||||||||    
T  53560698 attgtaaatgtaaa 53560685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 233
Target Start/End: Original strand, 44648437 - 44648588
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||||||||||||| ||||||||||||| | |  |||||||||||         || |||||||||| |  ||||||| |||||||||||| |    
T  44648437 aaaaagacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggag---------agagtaaagttggaaaaaaaaaat-aaagttgtattgga 44648526  T
Q  170 aatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||| |||||||||||||||  |||| |||||| ||||||| || ||||||| |||||    
T  44648527 aatgtaaagtgacattcattttaaaa--caatttttttttgctaaaacgacactcattttgaaa 44648588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 45095618 - 45095554
Alignment:
Q  130 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45095618 gagggtaaagttggaa--aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaat 45095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 53716090 - 53716031
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  53716090 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaa 53716031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 42857126 - 42857210
Alignment:
Q  111 aaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||||| || ||||||||| | || |||||||||| ||||||| | ||||||||||| |||||| ||||||||    
T  42857126 aaaagttggagtatttatcgaaggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaa 42857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 52222816 - 52222874
Alignment:
Q  115 gttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatg 173  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||    
T  52222816 gttggagtatttactgagggtaaagttggaagaaaaaaattaaagttgtattggaaatg 52222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 42007082 - 42007213
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattg--tgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||||||||||||||||||||||||||  ||   |  ||||||| ||||||||||| ||| |||||||   |  ||||| ||||| ||||    
T  42007082 taagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtt-taaaaaaaaatttaaaattgt 42007180  T
Q  164 attgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||||||   ||||||||||||||||    
T  42007181 attgaaaatgtaaaacgacattcattttaaaat 42007213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 35239492 - 35239438
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||||||||||||||| ||||||||||| | | |||||||||||    
T  35239492 taagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagagaaaagttgga 35239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 43599855 - 43599968
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||||||         ||||||||||||   || ||||||||||||||||||  |    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagttgga---------gagggtaaagttaaaagaaaaaaattaaagttgtatgaa 43599945  T
Q  169 aaatgtaaagtaacattcatttt 191  Q
    |||||||||   |||||||||||    
T  43599946 aaatgtaaaacgacattcatttt 43599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 52202383 - 52202442
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||| || |||||||||||||||||||||||||| |||   |||||||||||||||    
T  52202383 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaa 52202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2662514 - 2662552
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2662514 taagaaaaagacaaatttaaagttgcattgaaaattgtg 2662552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 13485909 - 13485998
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaagtgagg 239  Q
    |||||||||||||||||||| ||||||||| | ||||||||||| |||  |||  | |||| |||||| ||| ||||||| ||||| |||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaa--caaattgtttttgctaaagtgacactcattttgaaactgagg 13485998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 35239436 - 35239392
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||    
T  35239436 gaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 35239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 790145 - 790102
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||    
T  790145 aaaaaattaaagttgtattggaaatgtaaagtgacattaatttt 790102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 40049005 - 40048970
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaatt 101  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40049005 taagaaaaagacaaatttaaagttgcattgaaaatt 40048970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 31291055 - 31291113
Alignment:
Q  135 taaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaa 193  Q
    ||||||||  || |||||||||||||||||||  ||||||||||| | |||||||||||    
T  31291055 taaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcattttaa 31291113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 38165683 - 38165712
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||||||||||||||||||||||||||    
T  38165683 taagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 38165746 - 38165783
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacatt 185  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  38165746 aaaaaattaaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 44648358 - 44648423
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcct 66  Q
    ||||||||||| |||||  |||  |||||||||||||||||| |  ||||||||||||||||||||    
T  44648358 aattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcct 44648423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 50420422 - 50420389
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcatt 40  Q
    |||||| |||||||||||||||||||||||||||    
T  50420422 cacacagattaaaaaatagaatgaaataatcatt 50420389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 6084780 - 6084816
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattaga 43  Q
    |||||||||||||||||  ||||||||||||||||||    
T  6084780 cacacaaattaaaaaatgaaatgaaataatcattaga 6084816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 9167766 - 9167810
Alignment:
Q  133 ggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaa 177  Q
    |||||||| || || ||||||||||||||||||||||||| ||||    
T  9167766 ggtaaagtaggaagaaaaaaattaaagttgtattgaaaatataaa 9167810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 16240661 - 16240621
Alignment:
Q  136 aaagttgggaggaaaaaa-ttaaagttgtattgaaaatgta 175  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  16240661 aaagttgggagaaaaaaaattaaagttgtattgaaaatgta 16240621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 38100130 - 38100058
Alignment:
Q  113 aagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacatt 185  Q
    ||||| ||||||||| ||| ||||||||||| |   |||||||||||||||| |||||||  ||| |||||||    
T  38100130 aagtttgagtatttactgatggtaaagttggaacagaaaaattaaagttgtaatgaaaatacaaattaacatt 38100058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 4536766 - 4536539
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||| |||||||  |||  |||||||||||||||||| | | |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  4536766 aattgcacataaattaaggaatgaaatgaaataatcattagacatatcacttttactaaactgcccaagaaaaagacaaatttaaagttgcattgaaaat 4536667  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaa 200  Q
    |||| | |   |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||  |||    
T  4536666 tgtgtgag---aaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa--caa 4536572  T
Q  201 tcttttttcgctaaaatgatactcattatgaaa 233  Q
    | |||||| |||||| ||| ||||||| |||||    
T  4536571 ttttttttggctaaagtgacactcattttgaaa 4536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 1360373 - 1360182
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    ||||||||||||||||||  ||| |||| |||||||||||||  | |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  1360373 taattgcacacaaattaagtaatggaataaaataatcattagccatgacacttttactaaactgcacaagaaaaagacaaacttaaagttgcattgaaaa 1360274  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||    | ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||    
T  1360273 ttgtttaagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattggaaatgcaaagtgacattcatttt 1360182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 24775393 - 24775154
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||||||||||||   || ||||||||||||||||||||| | ||||||||||||| |||          ||||||||| ||||||||||||||      
T  24775393 aattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttat 24775294  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| | | ||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||| |||||||    
T  24775293 attgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcatttt 24775194  T
Q  192 aaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||  |||  |||||| ||| |||||| |||||||||||||    
T  24775193 aaaa--caaatttttttggctcaaatgacactcattatgaaa 24775154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 7743531 - 7743402
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||||||||||||||||| | | ||||||||||| |||||||||||||||||||||| || |||| |||||||||||||    
T  7743531 taagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttgtat 7743432  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    || ||||||||||| |||||||||||||||    
T  7743431 tggaaatgtaaagtgacattcattttaaaa 7743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 4840679 - 4840874
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattg 95  Q
    ||||||| ||||| |||| |||||||||||||||| |||| | |  |||||||||||||||         ||||||||||||||| ||||||||||||||    
T  4840679 gcacacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 4840778  T
Q  96 aaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||| |||| | | |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  4840779 aaaactgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 43388679 - 43388844
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||||||||||||| |||||||||| || | | |||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||    
T  43388679 taagaaaaatacaaacttaaagttgtattgaaaattatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcat 43388778  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||  ||||||||||| |||  |||  |||||| |||||||||| ||||||| |||||    
T  43388779 tgaaaatgtaaagcgacattcattttgaaa--caaatttttttggctaaaatgacactcattttgaaa 43388844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 36360323 - 36360520
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||| ||||||||| |||  |||||||||||||||||| | | ||||||||||||||||||         ||||||||||| |||||||||||||     
T  36360323 aattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgt 36360422  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||  || |||||||| |||||| |||||||||||||||||  || |||||||||||||||||||||||||| ||||| | |||||||||    
T  36360423 attgaaaattgtg--tgagaaaagtttgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcatttt 36360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 2459905 - 2459756
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| | |||||||||||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  2459905 taagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 2459806  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    |||| ||||||||||  |||||||||||||||  |||| |||||| ||||||    
T  2459805 attggaaatgtaaagcgacattcattttaaaa--caatttttttttgctaaa 2459756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 33093493 - 33093373
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||| ||||||||||||||||||||||||||| | | ||  ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  33093493 aagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 33093394  T
Q  171 atgtaaagtaacattcatttt 191  Q
    ||||||||| |||||||||||    
T  33093393 atgtaaagtgacattcatttt 33093373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 6592136 - 6591966
Alignment:
Q  26 aatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtat 124  Q
    |||||||||||||||||| | | ||||||||||||| || | |||||||||||||||||||||| |||||||||||| |||  | |||||||||||||||    
T  6592136 aatgaaataatcattagacataacacttttactaaattgtcaaagaaaaagacaaacttaaagt-gcattgaaaattatgcaagagaaaagttggagtat 6592038  T
Q  125 ttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    | |||||  | ||||||||||| |||||| |||||||||||||| ||||||||| | | |||||||||||||    
T  6592037 tcattgaaaggaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaa 6591966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 37106988 - 37106886
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  37106988 aaaaagaaaaacttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaa 37106889  T
Q  170 aat 172  Q
    |||    
T  37106888 aat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 14511630 - 14511465
Alignment:
Q  26 aatgaaataatcattagatagacacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatt 125  Q
    |||||||||||||||||| | |  | |||| |||| ||   |||||||||||||| |||||||| |||||||||||||||    |||||||| |||||||    
T  14511630 aatgaaataatcattagacataaccctttattaaaatgttcaagaaaaagacaaatttaaagttacattgaaaattgtgcaaaagaaaagttagagtatt 14511531  T
Q  126 tattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| ||||||| ||||||||||||||| |||||||| |||||||||||  |||||||||||    
T  14511530 tattgaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcatttt 14511465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 775906 - 776032
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||||||||||||||||||||||||||  |||| | | |||||||| |||||||||||||||||||||||  || ||||||||||||||||     
T  775906 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagtt-agaagaaaaaattaaagttgc 776004  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||  |||||||||||    
T  776005 attgaaaatgtaaagcgacattcatttt 776032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 66 - 215
Target Start/End: Original strand, 10580878 - 10581027
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||| |||||||||| ||||||||||||| | | ||  |||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  10580878 taagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 10580977  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    ||||||||| |||||| | ||||||||| |||  |||| |||||| ||||||    
T  10580978 attgaaaatataaagtgatattcattttgaaa--caattttttttggctaaa 10581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 41984551 - 41984436
Alignment:
Q  66 taagaaaaagacaaa-cttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttg 162  Q
    |||||| |||||||| |||||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||||| || |||||||||||||||    
T  41984551 taagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagttg 41984452  T
Q  163 tattgaaaatgtaaag 178  Q
    ||||||||||||||||    
T  41984451 tattgaaaatgtaaag 41984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 1298802 - 1298932
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| |||||||||||||||||||| || | | |||||||||||| ||||||||||| ||||||| |  |  |||||||||||||||||    
T  1298802 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtat 1298901  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    |  ||||||||||| ||||||||||| ||||    
T  1298902 tagaaatgtaaagtgacattcattttgaaat 1298932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 16316839 - 16316709
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  |||||||||| ||||||||||  ||||| |||| || ||||||||||||||||||    
T  16316839 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaatttggaagaaaaaaattaaagttgtat 16316740  T
Q  166 tgaaaatgtaaagtaacattcattttaaaat 196  Q
    || |||| |||||| ||||||| ||| ||||    
T  16316739 tggaaatataaagtgacattcaatttgaaat 16316709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 39866694 - 39866825
Alignment:
Q  67 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaag--ttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    ||||||| |||||||||||||||| ||||||||||||| | | |||||   || ||||||||||||| ||||||||||| || ||||||||||| ||| |    
T  39866694 aagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaagttggaagaaaaaaattaaatttgca 39866793  T
Q  165 ttgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||| ||||||||||  ||||||||||||||||    
T  39866794 ttggaaatgtaaagcgacattcattttaaaat 39866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 43460961 - 43460792
Alignment:
Q  15 ttaaaaaatagaatgaaataatcattagatagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaaaattgtgc 105  Q
    |||| |||| |||||||||||||||| ||||  ||||||||||||||||||         |||| |||||||||| ||||||||| |||||||||| ||     
T  43460961 ttaagaaatggaatgaaataatcattggata--cacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatgt 43460864  T
Q  106 gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaa 177  Q
    | | ||||||||| |||||||||||||||||| ||||| ||  |||| |||||||||||||| |||||||||    
T  43460863 gagagaaaagttgaagtatttattgagggtaacgttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 25332702 - 25332591
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgt--gcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||||||||||| ||||| ||||||||||||  | | | |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||     
T  25332702 taagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagtt-ggaagaaaaaattaaagttgc 25332604  T
Q  164 attgaaaatgtaa 176  Q
    |||| ||||||||    
T  25332603 attggaaatgtaa 25332591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 43344245 - 43344407
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||  ||||||||| |||||||||| || | | ||||| || ||||||||||| | ||||||||||| ||  |||||||||||||||||    
T  43344245 taagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaaattagagtatttattaaaggtaaagttggaag--aaaaattaaagttgtat 43344342  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||| ||| || ||||||||||| |||  |||| |||||| |||||||||| ||||||| |||||    
T  43344343 tgaaaatataaggtgacattcattttgaaa--caat-tttttttgctaaaatgacactcattttgaaa 43344407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 18374792 - 18374911
Alignment:
Q  72 aaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaa 171  Q
    ||||||||  ||||| ||| ||||||||||||| |    ||||||| ||||||||||||||||||||||||| || ||||||||||| || ||||| |||    
T  18374792 aaagacaagtttaaaattgtattgaaaattgtgagaagaaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaaa 18374891  T
Q  172 tgtaaagtaacattcatttt 191  Q
    |||||||| |||||||||||    
T  18374892 tgtaaagtgacattcatttt 18374911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 29795147 - 29795337
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatagac-acttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||| || |||||  ||| ||||||||||||||||||| | |  |||||||||||||||||         ||||||||||||||  ||||||||||    
T  29795147 aattgcacgcagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgc 29795246  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| |   ||||||||||||         ||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  29795247 attgaaaattgtgtgaaagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 29795337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 4566143 - 4566275
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||||| ||| ||||||||||||||||||||||| | | ||  ||||||||| | |||||||| | ||||||||  |  ||||||||||||||||    
T  4566143 taagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattgatgataaagttgaaaaaaaaaaattaaagttgt 4566242  T
Q  164 attgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||| |||||||||||| ||||  ||||||||||    
T  4566243 attaaaaatgtaaagtgacatatattttaaaat 4566275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 14378316 - 14378376
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14378316 aaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaat 14378376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 40987304 - 40987419
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||| ||||||||||||||||||||||| | |  |||||||||||         ||||||||||||| || ||||||||||||||||||    
T  40987304 taagaaaaagataaatttaaagttgcattgaaaattgtgagag--aaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtat 40987392  T
Q  166 tgaaaatgtaaagtaacattcatttta 192  Q
    |||||||||||||  ||||||||||||    
T  40987393 tgaaaatgtaaagcgacattcatttta 40987419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 40410573 - 40410473
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| |||||||||||||||||||||||   | ||||||||||||         |||||||||||||||| ||||||||||||||||||    
T  40410573 taagaaaaagacaaaattaaagttgcattgaaaattgtgtcagagaaaagttggag---------agggtaaagttgggagaaaaaaattaaagttgtat 40410483  T
Q  166 tgaaaatgta 175  Q
    || |||||||    
T  40410482 tggaaatgta 40410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 1381869 - 1381751
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||||||||| ||||||||||||||||| | |  ||||||||||| |         ||||||||||| || ||||||| |||||| |||    
T  1381869 taagaaaaagaaaaacttaaaattgcattgaaaattgtgagag--aaaagttggagaa---------ggtaaagttggaagaaaaaaatcaaagttatat 1381781  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    || |||||||||||||||||||||||||||    
T  1381780 tggaaatgtaaagtaacattcattttaaaa 1381751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 14698072 - 14697977
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||| || ||||||||||||||| |||||||||||||||  ||||||||||| |||  |||| |||||| ||||||| || ||||||| |||||    
T  14698072 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaa--caatttttttttgctaaaacgacactcattttgaaa 14697977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 34225880 - 34225826
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||||||    
T  34225880 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgga 34225826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14378195 - 14378323
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttg 90  Q
    ||||||||||||  ||||  ||||||||||||||||||||  ||| | ||||||||||||||||||         ||||||||||| ||| |||||||||    
T  14378195 taattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttg 14378294  T
Q  91 cattgaaaattgtgcgtgtgaaaagttgg 119  Q
    ||||||||||| |||| | ||||||||||    
T  14378295 cattgaaaattatgcgagagaaaagttgg 14378323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 45148055 - 45148103
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  45148055 gaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaa 45148103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 4766280 - 4766335
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| || |||||||||||||||||||||||||||||| | |||||||||||    
T  4766280 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcatttt 4766335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 34225821 - 34225778
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  34225821 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 34225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 4766234 - 4766288
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||||||    
T  4766234 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga 4766288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44228668 - 44228609
Alignment:
Q  4 ttgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaact 62  Q
    ||||||||  |||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  44228668 ttgcacacggattaaaaaatggaatgaaataatcattagatataacacttttactaaact 44228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 45372645 - 45372683
Alignment:
Q  157 aagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaa 45372683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 42969947 - 42969899
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||||||||||    
T  42969947 aaaaaattaaagtggtattaaaaatgtaaagtgacatttattttaaaat 42969899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 14698120 - 14698082
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  14698120 taagaaaaatacaaacttaaagttgtattgaaaattgtg 14698082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 13015 - 13246
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    |||||||||||| |||||  |||  |||||||||||||||||| | | ||||||||||||| ||| ||||||||||||||| |||||||| |||||||||    
T  13015 taattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgcttaagaaaaagacaaaattaaagttacattgaaaa 13114  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgca 199  Q
    ||||||  | ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||  ||    
T  13115 ttgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaa--ca 13212  T
Q  200 atcttttttcgctaaaatgatactcattatgaaa 233  Q
    || |||||| | |||| ||| ||||||| |||||    
T  13213 attttttttggttaaagtgacactcattttgaaa 13246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 30627287 - 30627057
Alignment:
Q  1 taattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaa 99  Q
    ||||||||||||||||||  |||  |||||||||||||||||||| | ||||||||||||| || | |||||||| ||||| ||||||||||||||||||    
T  30627287 taattgcacacaaattaatgaatgaaatgaaataatcattagatataacacttttactaaagtgtccaagaaaaaaacaaatttaaagttgcattgaaaa 30627188  T
Q  100 ttgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgca 199  Q
    ||||  | | |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||| ||||| |||  ||    
T  30627187 ttgtttgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaa--ca 30627090  T
Q  200 atcttttttcgctaaaatgatactcattatgaaa 233  Q
    |  |||||| |||||| ||| |||||||||||||    
T  30627089 a-attttttagctaaagtgacactcattatgaaa 30627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 12828629 - 12828828
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||||||||||||  |||  |||||||||||||||||| | | ||||||||||||||||||         |||||||||||||| |||||||||||    
T  12828629 aattgcacacaaattaatgaatgaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgc 12828728  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | |||||||||    
T  12828729 attgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcatttt 12828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 8052539 - 8052346
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||||||||||| ||||  |||||||||||||||||| | | |||||||| |||| |||  |||  |||||||||| ||||||||||||||||||    
T  8052539 aattgcacacaaattaagaaatgaaatgaaataatcattagacataacacttttattaaaatgctcaagtgaaagacaaacctaaagttgcattgaaaat 8052440  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||| | | ||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||    
T  8052439 tgtgggagagaatagttggagtatttattgagggtaaaattggga-gaaaaaattaaagttgtattagaaatataaagtgacattcattttaaaa 8052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 29915743 - 29915546
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc----------taagaaaaagacaaacttaaagttgcatt 94  Q
    ||||||| ||||| |||| |||||||||||| |||||| | | ||||||||||||||||||          |||||||||||||||| ||||||||||||    
T  29915743 gcacacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcatt 29915644  T
Q  95 gaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    | |||||||| | | |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  29915643 ggaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 29915546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 31275666 - 31275811
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattg 167  Q
    |||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  31275666 gaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattg 31275765  T
Q  168 aaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
     ||||||||||| ||||||||||| |||  |||| |||||| ||||||    
T  31275766 gaaatgtaaagtgacattcattttgaaa--caatttttttttgctaaa 31275811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 233
Target Start/End: Complemental strand, 29927407 - 29927173
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaa---------actgcctaagaaaaagacaaacttaaagttgcattga 96  Q
    |||||| |||||||||||||||||||||||||||||| | | ||||||||||||         |||   |||||||||||||||||||||||||||||||    
T  29927407 cacacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattga 29927308  T
Q  97 aaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||| |    | | |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||| ||||||||||| |||    
T  29927307 aaactacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 29927208  T
Q  196 tgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
      |||| |||||| ||||||| || ||||||| |||||    
T  29927207 --caat-ttttttggctaaaacgacactcattttgaaa 29927173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 23936606 - 23936769
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||| ||||||||||||||||||||||| | |  ||| |||||||||| |||||||||||||||||| || ||||||| ||||||| ||    
T  23936606 taagaaaaaaacaaatttaaagttgcattgaaaattgtgagag--aaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcat 23936703  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||||||||||||| |||  || | |||||| |||||| ||| ||||||| |||||    
T  23936704 tgaaaatgtaaagtaacattcattttgaaa--cagtttttttttgctaaagtgacactcattttgaaa 23936769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 17345156 - 17345322
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| ||||||||||| |||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||| |||||||||||    
T  17345156 taagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaatattaaagttgt 17345255  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||  ||||||||||| | |||||||||||||  |||| ||||||  ||||||||| ||||||| |||||    
T  17345256 attagaaatgtaaagtgatattcattttaaaa--caat-ttttttgactaaaatgacactcattttgaaa 17345322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 4123878 - 4124002
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||| |||| ||||||||||| ||||||||||||||||| |   |||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  4123878 taaggaaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaagaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtat 4123976  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    | |||||||||||| |||||||||||    
T  4123977 taaaaatgtaaagtgacattcatttt 4124002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 195
Target Start/End: Complemental strand, 34576675 - 34576545
Alignment:
Q  67 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    ||||| |||||||||||||||||||||||||||||||| | | ||  ||||||| |||||||||||||| ||||||||| || |||||||||||||||||    
T  34576675 aagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaagaaaaaaattaaagttgta 34576576  T
Q  165 ttgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||| ||||||||| | | |||||||||||||    
T  34576575 ttggaaatgtaaaatgatattcattttaaaa 34576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 26189636 - 26189513
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattg 167  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||  ||| |||||||||||||||||||||||||||| || |||| |||||||||| ||||    
T  26189636 aaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaatattaaagttgcattg 26189537  T
Q  168 aaaatgtaaagtaacattcatttt 191  Q
     |||||||||  ||||||||||||    
T  26189536 gaaatgtaaaacaacattcatttt 26189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 4132042 - 4132157
Alignment:
Q  111 aaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcg 210  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||| |||||||||||||||  |||| |||||| |    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaa--caat-ttttttgg 4132138  T
Q  211 ctaaaatgatactcattat 229  Q
    |||||||||  ||||||||    
T  4132139 ctaaaatgacgctcattat 4132157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 26669120 - 26669245
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| |||||||||||||||||||| || | | ||||||||||||  |||||||||| |||||||||  |  |||||||||||||||||    
T  26669120 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtat 26669219  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    || |||| |||||| |||||||||||    
T  26669220 tggaaatataaagtgacattcatttt 26669245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 11785129 - 11785242
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||| ||| ||||||||| ||||||||||||| | | |||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||| |    
T  11785129 aaaaagataaatttaaagttgtattgaaaattgtgtgagagaaaagttagaatatttattgagggtaaagtt-ggaagaaaaaattaaagttgtattgga 11785227  T
Q  170 aatgtaaagtaacat 184  Q
    |||||||||| ||||    
T  11785228 aatgtaaagtgacat 11785242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 10494788 - 10494913
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    |||||||||||||| |||||||||||||||||||  | | ||||||||||| ||||||||  ||| |||||||  || ||||||||||||||| |||| |    
T  10494788 aaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagttgaaagaaaaaaattaaagttgaattgga 10494887  T
Q  170 aatgtaaagtaacattcattttaaaa 195  Q
    |||||||| | |||||||||||||||    
T  10494888 aatgtaaactgacattcattttaaaa 10494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 32258838 - 32258727
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaa-gttggagtatttattg-agggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagt 179  Q
    ||||||||||||||||||||||| | | ||||| |||||||||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  32258838 ttaaagttgcattgaaaattgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagt 32258739  T
Q  180 aacattcatttt 191  Q
     |||||||||||    
T  32258738 gacattcatttt 32258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 25932754 - 25932629
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaa--gttggagtatttattgagggtaaagttgggaggaaaaaa-ttaaagttgtattgaa 169  Q
    ||||||||||||||||| |||||||||||||| | | |||||  ||| ||||||||||||||| ||||||| | || |||||| ||||||||| ||||||    
T  25932754 aagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagttagaagaaaaaaaattaaagttgcattgaa 25932655  T
Q  170 aatgtaaagtaacattcattttaaaa 195  Q
    |||||||||  ||||||||| |||||    
T  25932654 aatgtaaagccacattcattataaaa 25932629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 195
Target Start/End: Complemental strand, 6140715 - 6140601
Alignment:
Q  82 ttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagt 179  Q
    ||||| |||||||||||||||||   | | ||||||||  |||||||||||| ||||||||||| || ||||||||||||||| |||| ||||||||||     
T  6140715 ttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagc 6140617  T
Q  180 aacattcattttaaaa 195  Q
     |||||||||||||||    
T  6140616 gacattcattttaaaa 6140601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 6143169 - 6143085
Alignment:
Q  111 aaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||  |||||||||||| ||||||||||| || ||||||||||||||| |||| ||||||||| | |||||||||||||||    
T  6143169 aaaagtttaagtatttattgaaggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaa 6143085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 19689874 - 19689985
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaa 181  Q
    ||||||||| ||||| ||||||| | | ||||||||||||||||| || ||  ||||||||| || ||| |  ||||||||||||  |||||||||||||    
T  19689874 ttaaagttgtattgacaattgtgtgagagaaaagttggagtatttttttagattaaagttggaagaaaata--taaagttgtattagaaatgtaaagtaa 19689971  T
Q  182 cattcattttaaaa 195  Q
    ||||||||||||||    
T  19689972 cattcattttaaaa 19689985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 34439431 - 34439560
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaa-----agttggagtatttattgagggtaaagttgggaggaaaaaattaaagt 160  Q
    |||||||||||||||| ||||||||||||| ||||||||   | ||||     ||||||||||| |||||| ||||||||| ||| |||| ||| |||||    
T  34439431 taagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagtt-ggaagaaagaatgaaagt 34439529  T
Q  161 tgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||| ||||||||| | |||||||||||    
T  34439530 tgtattggaaatgtaaaatgacattcatttt 34439560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 1924696 - 1924851
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||| |||| ||||| ||||||||||||||||||||||| | | ||||||||||||         ||||| ||||||  |  ||||||||||||||||||    
T  1924696 taaggaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggag---------agggtgaagttgaaaa-aaaaaattaaagttgtat 1924785  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||| | |||||||||||||||  |||  |||||| |||||| ||| ||||||| |||||    
T  1924786 tgaaaatgtaaaatgacattcattttaaaa--caaatttttttggctaaagtgacactcattttgaaa 1924851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 30626955 - 30626852
Alignment:
Q  110 gaaaagttggagtattt-attgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatctttttt 208  Q
    |||||||| |||||||| ||||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||| |||  |||| ||||||    
T  30626955 gaaaagtttgagtattttattgagaataaagttgagag-aaaaaattaaagttgtattgaaaatgtaaagtaatatttattttgaaa--caatttttttt 30626859  T
Q  209 cgctaaa 215  Q
     ||||||    
T  30626858 agctaaa 30626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 3015964 - 3015921
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 3015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 7e-53; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 45377107 - 45377337
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||| |||||||||||| ||||  |||||||| |||||||||   | || |||||||||| |||  || |||||||||||||||||||| ||||||||||    
T  45377107 aattacacacaaattaagaaatgaaatgaaatgatcattagacttatcatttttactaaattgctcaataaaaagacaaacttaaagtttcattgaaaat 45377206  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaa 200  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||| ||||   |    
T  45377207 tgtgcgagagaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcattttgaaat--ta 45377304  T
Q  201 tcttttttcgctaaaatgatactcattatgaaa 233  Q
    | |||||| |||||| ||| |||||||||||||    
T  45377305 tatttttttgctaaagtgacactcattatgaaa 45377337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 28751430 - 28751596
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||| ||||||||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  28751430 taagaaaaggacaaacttaaagttacattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 28751529  T
Q  166 tgaaaatgtaaagtaaca-ttcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||| ||| |||||||| ||||  ||| |||||| |||||| ||| ||||||| |||||    
T  28751530 tgaaaatgtaaagtgacatttcattttgaaat--aattttttttggctaaagtgacactcattttgaaa 28751596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 11650187 - 11650063
Alignment:
Q  67 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtatt 166  Q
    ||||||||||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  11650187 aagaaaaagacaaacttaaagttgcattggaaattgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 11650088  T
Q  167 gaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| |||||||||||    
T  11650087 gaaaatgtaaagtgacattcatttt 11650063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 5317600 - 5317724
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  5317600 taagaaaaagacaaacttaaagttgcattgaaaattgtg-gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagttgtat 5317698  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    ||||| |||||||| |||||||||||    
T  5317699 tgaaattgtaaagtgacattcatttt 5317724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 12002373 - 12002217
Alignment:
Q  69 gaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattga 168  Q
    |||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||     
T  12002373 gaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattgg 12002274  T
Q  169 aaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    ||||||||| | |||||||||||||||  |||| |||||| ||||||| || |||||||    
T  12002273 aaatgtaaaatgacattcattttaaaa--caattttttttagctaaaacgacactcatt 12002217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 12851908 - 12851746
Alignment:
Q  30 aaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttat 128  Q
    ||||||||||||| || | |||||||| |||| |||| |||||||||||||| ||||||||||||| ||||||||  |  ||||||||| |||||| |||    
T  12851908 aaataatcattaggtataacacttttaataaaatgcccaagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatat 12851809  T
Q  129 tgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||    
T  12851808 tgagggtaaagttgggagaaaaaaattaaagttctattggaaatgtaaagtgacattcatttt 12851746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 17806397 - 17806562
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||| ||||||||||||||||  | | |||||||||||||||||||||| |||||| |||| || ||||||||||||||||||    
T  17806397 taagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagttgtat 17806496  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    || ||||||||||  ||| |||||||||||  |||| |||||| |||||| ||| ||||||| |||||    
T  17806497 tggaaatgtaaagcgacactcattttaaaa--caattttttttggctaaagtgacactcattttgaaa 17806562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 254933 - 255095
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttg 162  Q
    |||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  254933 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttg 255032  T
Q  163 tattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
     |||| ||||||||||  ||||||||||| |||  |||| |||||| ||||||  ||||||||||    
T  255033 cattggaaatgtaaagcgacattcattttgaaa--caatttttttttgctaaagcgatactcatt 255095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 15647021 - 15647248
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    |||||||||||||||||  |||  || |||||| |||||||| | | |||||||||| || || | ||||||||||||||  ||| |||| |||||||||    
T  15647021 aattgcacacaaattaaggaatgtaaagaaatattcattagacataacacttttactgaattgaccaagaaaaagacaaaactaa-gttggattgaaaat 15647119  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaa 200  Q
    | |||  | |||||||||||||||||||| |||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| |||  |||    
T  15647120 tatgcaagagaaaagttggagtatttattaagggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaa--caa 15647215  T
Q  201 tcttttttcgctaaaatgatactcattatgaaa 233  Q
    | |||||| |||||| ||| |||||||||||||    
T  15647216 tttttttttgctaaagtgacactcattatgaaa 15647248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 6332371 - 6332149
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcct---------aagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||||||||| |||| ||||||||||||||||||| | | |||||||||||||||||||         | ||||||||||||| ||||||| |    
T  6332371 aattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatgaaaaagacaaacataaagttac 6332272  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggag-gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattt 190  Q
    ||||||||||||| | |  ||||||||||||||||||| || |||||||||  ||  |||||||||||||||| || |||||||||||| ||||||||||    
T  6332271 attgaaaattgtgtgagaaaaaagttggagtatttattaagagtaaagttgaaagaaaaaaaattaaagttgtgttaaaaatgtaaagtgacattcattt 6332172  T
Q  191 taaaatgcaatcttttttcgctaaa 215  Q
    |||||  |||| |||||| ||||||    
T  6332171 taaaa--caatttttttttgctaaa 6332149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 44582800 - 44582932
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgt--gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||||||||||||||||||||||||||| || | |   |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  44582800 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 44582899  T
Q  164 attgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||| ||||||||||| ||||| ||||| ||||    
T  44582900 attggaaatgtaaagtgacatttattttgaaat 44582932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 6377234 - 6377429
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaagttgcattgaaaat 100  Q
    ||||||||| |||||||  |||  |||||||||||||||||| | | ||||||||||||| |||| ||||||||||||||||||||| || ||| |||||    
T  6377234 aattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgcccaagaaaaagacaaacttaaagctgtattaaaaat 6377333  T
Q  101 tgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    | |||| |  |||||||| |||||||||||| | ||||||| |||| |||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  6377334 tatgcgaga-aaaagttgtagtatttattgaagataaagttaggagaaaaaaaattaaaatgttattgaaaatgtaaagtaacattcattttaaaat 6377429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 17919846 - 17919972
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||||||||||||||||||||||||||| | |  ||||||| |||||| |||||||||||||||||| || |||||||||||||||||||| |    
T  17919846 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattgga 17919945  T
Q  170 aatgtaaagtaacattcattttaaaat 196  Q
    |||||||||| | ||||||||| ||||    
T  17919946 aatgtaaagtgatattcattttgaaat 17919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 1429059 - 1428867
Alignment:
Q  14 attaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc----------taagaaaaagacaaacttaaagttgcattgaaaattg 102  Q
    ||||| |||| |||||||||||| |||||||| | ||||||||||||||||||          |||||||| |||||||||||||||| |||| ||||||    
T  1429059 attaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattg 1428960  T
Q  103 tgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    || | | |||||||| ||||||||||||||||||||||||  || |||||||| ||||||||||  ||||||||||| |||||||||||||||    
T  1428959 tgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaa 1428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 2245918 - 2245789
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgc--gtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||||||||||||| ||||||||||||||||   | | |||||||| ||||||||||||||||||||||||  || |||| |||||||||||    
T  2245918 taagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgt 2245819  T
Q  164 attgaaaatgtaaagtaacattcattttaa 193  Q
    ||||||||||||| || |||||||||||||    
T  2245818 attgaaaatgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 2459136 - 2458973
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||| ||||||||||||||| ||||||||||||| | |  ||||||| |||||||| |||||||||||||||| || ||||||||||||||| ||    
T  2459136 taagaaaaatacaaacttaaagttgtattgaaaattgtgagag--aaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttgcat 2459039  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||  ||||||||||| |||  |||  |||||| ||||||| || ||||||| |||||    
T  2459038 tgaaaatgtaaagcgacattcattttgaaa--caaatttttttggctaaaacgacactcattttgaaa 2458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 26252250 - 26252123
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaa--gttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||| |||||||||||||||||||||||||||||||| | | |||||  ||| ||||||||||| ||||||||||||| || |||||||| |||||||    
T  26252250 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaatttaagttgt 26252151  T
Q  164 attgaaaatgtaaagtaacattcatttt 191  Q
    |||| ||||||||||| |||||||||||    
T  26252150 attggaaatgtaaagtgacattcatttt 26252123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 28200244 - 28200406
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  28200244 taagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 28200343  T
Q  164 a-ttgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    | ||||||||||| ||  ||||||||||| |||  |||| ||||||  |||||| || |||||||    
T  28200344 atttgaaaatgtagagcgacattcattttgaaa--caattttttttgactaaaacgacactcatt 28200406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 15698773 - 15698902
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| ||||||||||||  |||||||||| || | | |||||||| |||||||||||||| |||||||||| || | ||||||||||||||||    
T  15698773 taagaaaaagataaacttaaagttctattgaaaattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtat 15698872  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    || |||| |||||| |||||||||||||||    
T  15698873 tggaaatataaagtgacattcattttaaaa 15698902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 50349885 - 50350045
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||       ||| || ||||||||||||||||||    
T  50349885 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagg-------tggaagaaaaaaattaaagttgtat 50349977  T
Q  166 tgaaaatgtaaagtaac--attcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    || ||||||||||| ||  ||||||||| |||  |||| |||||| |||||| ||||||||||| |||||    
T  50349978 tggaaatgtaaagtgacatattcattttgaaa--caattttttttggctaaagtgatactcattttgaaa 50350045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 43929883 - 43929690
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattga 96  Q
    |||||||||||| |||| ||||||||||||||||||| | | ||||||||||| ||| ||         |||||||||||| |||||||||||| || ||    
T  43929883 cacacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcga 43929784  T
Q  97 aaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||| || | | ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||   ||| | |||||||||||    
T  43929783 aaattatgtgagagaaaagt-ggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcatttt 43929690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 22665067 - 22664900
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||| |||||||||||||||||| ||| ||||||||| | | |||  ||||||||||||||||||||||||||||| || ||  |||||| |||||||    
T  22665067 taagaacaagacaaacttaaagttgaattaaaaattgtgagagagaa--gttggagtatttattgagggtaaagttggaagaaattaattaacgttgtat 22664970  T
Q  166 tgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaagtgagg 239  Q
    || ||||||||||| ||||||||||| |||  |||  |||||| |||||| |||| |||||| ||||| |||||    
T  22664969 tggaaatgtaaagtgacattcattttgaaa--caa--ttttttagctaaagtgatgctcattttgaaactgagg 22664900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 40719219 - 40719015
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatag-acacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    |||||||||||| ||||  |||  |||||||||||||||||| |  ||| |||||||||||||||         || |||||||| ||| |||||||||     
T  40719219 aattgcacacaagttaaggaatgaaatgaaataatcattagacatcacatttttactaaactgccattgttttatatgaaaaagataaatttaaagttgt 40719120  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||| |||||||   |  ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||| | |||||||||||    
T  40719119 attgagaattgtgtaagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T
Q  192 aaaat 196  Q
     ||||    
T  40719019 taaat 40719015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 672303 - 672397
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagtt 161  Q
    ||||||||||||||||||||| ||||||||||||||||| | | |||||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  672303 taagaaaaagacaaacttaaatttgcattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagtt-ggaagaaaaaattaaagtt 672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 42650271 - 42650401
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaa-gttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgta 164  Q
    ||||||||||||||||||||| ||||||||||||||||| | | ||||| |||| ||||||| |||| ||||||| ||| || |||||||||||||||||    
T  42650271 taagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagctggaagaaaaaaattaaagttgta 42650370  T
Q  165 ttgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||  ||||||||||  ||||| |||||||||    
T  42650371 ttagaaatgtaaagcgacatttattttaaaa 42650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 44024670 - 44024528
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||||||||||||  ||||||||||||| | | ||  ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  44024670 aagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaa 44024571  T
Q  171 atgtaaagtaacattcattttaaaatgcaatcttttttcgctaaa 215  Q
    ||||||||   |||||||||| |||  |||| |||||| ||||||    
T  44024570 atgtaaagcggcattcattttgaaa--caatttttttttgctaaa 44024528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 44583902 - 44583773
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||||||||||||||||||| ||||||||||||| | || |   |||||||| ||||| ||||| ||||||||||  | || ||||||||||||||||||    
T  44583902 taagaaaaagacaaacttaatgttgcattgaaaactatgtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtat 44583803  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    | ||||||||| || |||||||||||||||    
T  44583802 taaaaatgtaaggtgacattcattttaaaa 44583773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 52403606 - 52403482
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    |||| |||||||||| ||||||||||| |||||||| || | | || ||||| ||||||||||||||||||||||||| |   |||| ||||||||||||    
T  52403606 taaggaaaagacaaaattaaagttgcactgaaaattatgtgagagagaagtttgagtatttattgagggtaaagttggaatagaaaacttaaagttgtat 52403507  T
Q  166 tgaaaatgtaaagtaacattcattt 190  Q
    ||||||| |||||| ||||||||||    
T  52403506 tgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 5854246 - 5854360
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgt--gaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    |||||||||||||| ||||| |||||||||||||||||| | |   |||||||||||||||||||||||| ||||||||| |  |||||||||||||||     
T  5854246 taagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaattaaagttgc 5854345  T
Q  164 attgaaaatgtaaag 178  Q
    |||| ||||||||||    
T  5854346 attggaaatgtaaag 5854360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 48259811 - 48260001
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| |||||  ||||||||||||||||| ||||| | | |||||||| |||||||||         ||||||||||| ||||||||||||||    
T  48259811 aattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgctttataagaaaaagataaacttaaagttgc 48259910  T
Q  92 attgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    ||||||||||||| |   |||||||| |||         ||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  48259911 attgaaaattgtgtgaaagaaaagtttgag---------agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 48260001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 50158345 - 50158459
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaa-aattaaagttgtattgaaaatgtaaagta 180  Q
    ||||||||||||| ||||||||| | | |||||||||||| |||| |||||| ||||||||| || |||| ||||||||||||||||||||||||||||     
T  50158345 ttaaagttgcatt-aaaattgtgtgagagaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtg 50158443  T
Q  181 acattcattttaaaat 196  Q
    ||||||||||| ||||    
T  50158444 acattcattttgaaat 50158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 11134488 - 11134608
Alignment:
Q  72 aaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    ||||||||||||| |||||||||| |||||||| | | ||  ||||||||||||||||||||||| |||||||| |  || |||||||||||| ||||||    
T  11134488 aaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagttggaaa-aagaaattaaagttgcattgaa 11134586  T
Q  170 aatgtaaagtaacattcatttt 191  Q
    |||||||||| |||||||||||    
T  11134587 aatgtaaagtgacattcatttt 11134608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 43738276 - 43738405
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||| |||  ||||||| | |||||||||| | |   ||||| ||| ||||||||||||| |||||||||  || |||||||| |||||||||    
T  43738276 taagaaaaagataaatataaagttactttgaaaattgcgtgaaagaaaaattgaagtatttattgagagtaaagttgaaagaaaaaaatttaagttgtat 43738375  T
Q  166 tgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||| |||| |||||||||||||||    
T  43738376 tgaaaatgtgaagtgacattcattttaaaa 43738405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 24040995 - 24041100
Alignment:
Q  25 gaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaa 114  Q
    ||||||||||||||||||| | | ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| | | |||||    
T  24040995 gaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 24041094  T
Q  115 gttgga 120  Q
    ||||||    
T  24041095 gttgga 24041100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 84466 - 84594
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgc 91  Q
    ||||||||||| |||||  ||| ||||||||||||||||||| | | ||||||||||||| || |         ||||||||||||||||||||||||||    
T  84466 aattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgc 84565  T
Q  92 attgaaaattgtgcgtgtgaaaagttgga 120  Q
    ||||||||||||||| | ||||| |||||    
T  84566 attgaaaattgtgcgagagaaaaattgga 84594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 24041105 - 24041198
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaagtgaggagta 243  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||  |||| |||||| ||||||  ||  |||||| ||||| |||||||||    
T  24041105 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa--caatttttttttgctaaagcgacgctcattttgaaactgaggagta 24041198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 43755102 - 43755018
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    ||||||||||||||||||||||||||||||||| || |||||||| ||||  ||| |||||| |||||| ||| ||||||| |||||    
T  43755102 gaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttgaaat--aattttttttggctaaagtgacactcattttgaaa 43755018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 84598 - 84673
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactca 225  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||  |||| |||||| |||||| ||| |||||    
T  84598 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaa--caatttttttttgctaaagtgacactca 84673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 1430559 - 1430613
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttgga 120  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  1430559 taagaaaaagacaaacttaaagttgcattggaaattgtgtgtgagaaaagttgga 1430613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 40060983 - 40061049
Alignment:
Q  130 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||| | |  |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  40060983 gagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaat 40061049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 49894854 - 49894777
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcatt 227  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||  ||| |||||| ||||||  ||||||||||    
T  49894854 aaaaaattaaagttgtattggaaatgtaaaataacattcattttgaaat--aattttttttggctaaagcgatactcatt 49894777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 10690908 - 10691015
Alignment:
Q  7 cacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgcattga 96  Q
    |||||| ||||| ||||  |||||||||||||||||||| | || ||||||||||||||          |||||||||||||||||||||||||||||||    
T  10690908 cacacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattga 10691007  T
Q  97 aaattgtg 104  Q
    ||||||||    
T  10691008 aaattgtg 10691015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 26582973 - 26582926
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  26582973 aaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaa 26582926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 38132260 - 38132315
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| || |||||||||||||||||||| ||||||||||| |||||||||||    
T  38132260 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 38132315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 37437426 - 37437464
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtg 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37437426 taagaaaaagacaaacttaaagttgcattgaaaattgtg 37437464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 48320093 - 48320141
Alignment:
Q  147 gaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  48320093 gaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaa 48320141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 1430605 - 1430660
Alignment:
Q  136 aaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||| || |||||||||||||||||||  ||||||||||| |||||||||||    
T  1430605 aaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 1430660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 43755231 - 43755104
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagatagacacttttactaaactgcc---------taagaaaaagacaaacttaaagttgca 92  Q
    ||||||||||| |||| | ||| |||||||||||| |||| | | ||||||||||||||  |||         |||||||||||||||||||||||||      
T  43755231 aattgcacacagattacagaatggaatgaaataataattaaaaaaacacttttactaaatcgcccttacttaataagaaaaagacaaacttaaagttgtt 43755132  T
Q  93 ttgaaaattgtgcgtgtgaaaagttgga 120  Q
    |||||||||||| | | |||||||||||    
T  43755131 ttgaaaattgtgtgagagaaaagttgga 43755104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 9552436 - 9552481
Alignment:
Q  150 aaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaa 9552481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 10691035 - 10691080
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaa 193  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||    
T  10691035 aaaaaattatagttgtattgaaaatgtaaagtgacattcagtttaa 10691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 43105551 - 43105660
Alignment:
Q  3 attgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcc---------taagaaaaagacaaacttaaagttgca 92  Q
    ||||||| || ||||| |||| ||||||||||||||||||| | | ||||||||||||| | ||         ||||||||||||||||||||| |||||    
T  43105551 attgcacgcatattaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgca 43105650  T
Q  93 ttgaaaattg 102  Q
    ||||||||||    
T  43105651 ttgaaaattg 43105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 43105692 - 43105733
Alignment:
Q  155 taaagttgtattgaaaatgtaaagtaacattcattttaaaat 196  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcattttaaaat 43105733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 50349805 - 50349869
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc 65  Q
    ||||| |||||||||||  ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  50349805 aattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcc 50349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 9333155 - 9333108
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||    
T  9333155 aaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaa 9333108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 9356928 - 9356881
Alignment:
Q  148 aaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||    
T  9356928 aaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaa 9356881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 30006260 - 30006205
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggag 121  Q
    ||||||||||| ||| ||||||||||||||||||||||  | | ||||||||||||    
T  30006260 taagaaaaagataaatttaaagttgcattgaaaattgtttgagagaaaagttggag 30006205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 49894912 - 49894861
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagtt 117  Q
    |||||| ||||||||||||||||| |||||||||||||| | | ||||||||    
T  49894912 taagaataagacaaacttaaagttacattgaaaattgtgtgagagaaaagtt 49894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 70475 - 70642
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtga--aaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgt 163  Q
    ||||||||| ||||||||||||||| ||||||||||||| | | ||  |||||||||||||||||||||||||||||||| || |||||||||||||||     
T  70475 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 70574  T
Q  164 attgaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||| ||||||||||| |||  |||| |||||| ||||||| || ||||||| |||||    
T  70575 attgaaaatgtaaagtgacattcattttgaaa--caattttttttggctaaaacgacactcattttgaaa 70642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 4135 - 4260
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    |||| |||||||||||||||  |||||||||| || | | |||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||  |    
T  4135 aaaatgacaaacttaaagtttgattgaaaattatgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattaga 4234  T
Q  170 aatgtaaagtaacattcattttaaaa 195  Q
    |||||||||||||||| |||||||||    
T  4235 aatgtaaagtaacatttattttaaaa 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 321851 - 321727
Alignment:
Q  73 aagacaaacttaaagttgcattgaaaattgtgcgtgtg--aaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 170  Q
    |||||||||||||| ||||||||||||||||| | | |  ||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||| ||    
T  321851 aagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 321752  T
Q  171 atgtaaagtaacattcattttaaaa 195  Q
    ||||||||  |||||||||||||||    
T  321751 atgtaaagcgacattcattttaaaa 321727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 16065 - 16188
Alignment:
Q  70 aaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaa 169  Q
    |||| |||||||||||||||||||||||||||||| | | |||| |||||| |||||||||||||||||||| | || ||||||||||||||||||| ||    
T  16065 aaaatgacaaacttaaagttgcattgaaaattgtgtgagagaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaa 16164  T
Q  170 aatgtaaagtaacattcattttaa 193  Q
    ||| |||||  ||||| |||||||    
T  16165 aatataaagagacatttattttaa 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 1673 - 1548
Alignment:
Q  66 taagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 165  Q
    ||||||||||||||| |||||||||||||||||||| || | | ||||||||||||  |||||||||| |||||||||  |  |||||||||||||||||    
T  1673 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtat 1574  T
Q  166 tgaaaatgtaaagtaacattcatttt 191  Q
    || |||| |||||| |||||||||||    
T  1573 tggaaatataaagtgacattcatttt 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 7732 - 7849
Alignment:
Q  76 acaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 175  Q
    ||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||  ||||||| ||| |||||| | ||||||||||| ||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagtt-ggaagaaaaattaaaagttgtatt-aaaatgta 7829  T
Q  176 aagtaacattcattttaaaa 195  Q
    |||| |||||||||||||||    
T  7830 aagtgacattcattttaaaa 7849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 12030 - 12219
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcct--------aagaaaaagacaaacttaaagttgca 92  Q
    ||||||||| | |||||  ||| ||||||||||||||||||| | | |||||||||||||||||||        ||||||||||||||||||||||||||    
T  12030 aattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaactgccttactttataagaaaaagacaaacttaaagttgca 12129  T
Q  93 ttgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcatttt 191  Q
    |||||||||||| | | |||||||| ||         |||||||||||||| || |||||||||||||| ||||| ||||||||| | |||||||||||    
T  12130 ttgaaaattgtgtgagagaaaagtttga---------gagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 158229 - 158154
Alignment:
Q  67 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttg 142  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttgtagtatttattgagggtaaagttg 158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 8274 - 8163
Alignment:
Q  82 ttaaagttgcattgaaaattgtgcgtgtgaaaagttggagtatttattgagggtaaagttg--ggaggaaaaaattaaagttgtattgaaaatgtaaagt 179  Q
    |||||||||| |||||||||||| | | ||||||||||||||||| |||||| ||||||||   ||  |||||||||||||||||||||||||||||| |    
T  8274 ttaaagttgctttgaaaattgtgtgagagaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaatt 8175  T
Q  180 aacattcatttt 191  Q
     |||||||||||    
T  8174 gacattcatttt 8163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 8349 - 8289
Alignment:
Q  6 gcacacaaattaaaaaatagaatgaaataatcattagata-gacacttttactaaactgcc 65  Q
    ||||||| |||||||||| |||||||||||||||| ||||  |  ||||||||||||||||    
T  8349 gcacacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaactgcc 8289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 31748 - 31663
Alignment:
Q  2 aattgcacacaaattaaaaaatagaatgaaataatcattagataga-cacttttactaaactgcctaagaaaaagacaaacttaaa 86  Q
    |||||||||||||||||  |||  |||||||||||||||||| | | |||||||||||||||| | |||||||||| |||||||||    
T  31748 aattgcacacaaattaacgaatgaaatgaaataatcattagagataacacttttactaaactgtccaagaaaaagataaacttaaa 31663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 31667 - 31626
Alignment:
Q  154 ttaaagttgtattgaaaatgtaaagtaacattcattttaaaa 195  Q
    ||||| || ||||| |||||||||||||||||||||||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaa 31626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 1691 - 1606
Alignment:
Q  148 aaaaaattaaagttgtatt--gaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||| ||||  ||| |||||| |||||| ||| ||||||| |||||    
T  1691 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaat--aattttttttggctaaagtgacactcattttgaaa 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 9430 - 9345
Alignment:
Q  148 aaaaaattaaagttgtatt--gaaaatgtaaagtaacattcattttaaaatgcaatcttttttcgctaaaatgatactcattatgaaa 233  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||| ||||  ||| |||||| |||||| ||| ||||||| |||||    
T  9430 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaat--aattttttttggctaaagtgacactcattttgaaa 9345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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