View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9418_low_7 (Length: 317)

Name: NF9418_low_7
Description: NF9418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9418_low_7
NF9418_low_7
[»] chr2 (19 HSPs)
chr2 (24-309)||(12577100-12577385)
chr2 (20-309)||(19716428-19716717)
chr2 (20-309)||(19720991-19721280)
chr2 (28-302)||(23097436-23097710)
chr2 (36-297)||(23274352-23274613)
chr2 (28-274)||(20848340-20848585)
chr2 (72-270)||(24704932-24705130)
chr2 (209-297)||(28350807-28350895)
chr2 (101-270)||(11351161-11351330)
chr2 (162-270)||(24657108-24657216)
chr2 (218-264)||(21320459-21320505)
chr2 (208-270)||(22462931-22462993)
chr2 (208-269)||(23205245-23205306)
chr2 (208-269)||(23676849-23676910)
chr2 (208-270)||(23116509-23116571)
chr2 (209-306)||(21901469-21901566)
chr2 (218-270)||(23028912-23028963)
chr2 (27-55)||(23105393-23105421)
chr2 (218-270)||(24678428-24678480)
[»] chr7 (25 HSPs)
chr7 (24-309)||(18050811-18051096)
chr7 (28-309)||(14283232-14283513)
chr7 (132-309)||(14144875-14145052)
chr7 (28-302)||(11385294-11385568)
chr7 (68-266)||(12712564-12712762)
chr7 (28-158)||(14140789-14140919)
chr7 (35-297)||(13676568-13676830)
chr7 (68-297)||(15099473-15099702)
chr7 (28-295)||(13965540-13965807)
chr7 (35-309)||(12798362-12798633)
chr7 (35-295)||(26115462-26115722)
chr7 (28-295)||(26091670-26091937)
chr7 (28-295)||(21755522-21755789)
chr7 (28-295)||(40924689-40924956)
chr7 (28-288)||(49155411-49155671)
chr7 (71-297)||(12459781-12460007)
chr7 (35-297)||(19150128-19150390)
chr7 (35-297)||(20749527-20749789)
chr7 (28-309)||(16947330-16947611)
chr7 (28-310)||(13024454-13024736)
chr7 (104-295)||(9591549-9591740)
chr7 (215-305)||(14261108-14261198)
chr7 (207-297)||(12203670-12203760)
chr7 (208-270)||(16726360-16726422)
chr7 (208-270)||(17703374-17703436)
[»] chr4 (22 HSPs)
chr4 (24-309)||(53750341-53750626)
chr4 (24-309)||(51603663-51603948)
chr4 (35-297)||(16150763-16151025)
chr4 (35-297)||(16154909-16155171)
chr4 (28-297)||(20893151-20893420)
chr4 (104-306)||(15073555-15073757)
chr4 (28-274)||(27903505-27903751)
chr4 (28-295)||(7357387-7357654)
chr4 (35-297)||(11204115-11204377)
chr4 (35-309)||(14993238-14993512)
chr4 (28-295)||(3261679-3261946)
chr4 (28-295)||(29450422-29450689)
chr4 (97-297)||(18259630-18259830)
chr4 (68-297)||(15266936-15267165)
chr4 (28-293)||(44658753-44659018)
chr4 (104-295)||(13513546-13513737)
chr4 (208-270)||(18224123-18224185)
chr4 (208-270)||(18604469-18604531)
chr4 (215-299)||(16219495-16219579)
chr4 (215-299)||(16222815-16222899)
chr4 (215-297)||(14697408-14697490)
chr4 (209-310)||(8708978-8709079)
[»] chr3 (40 HSPs)
chr3 (24-309)||(13944769-13945054)
chr3 (24-309)||(8744489-8744774)
chr3 (56-309)||(16384471-16384724)
chr3 (28-309)||(16831627-16831908)
chr3 (35-297)||(31941659-31941921)
chr3 (35-309)||(17189130-17189404)
chr3 (35-297)||(31692296-31692558)
chr3 (28-309)||(24190053-24190334)
chr3 (35-297)||(12357638-12357900)
chr3 (170-306)||(18131449-18131585)
chr3 (28-295)||(10408717-10408984)
chr3 (35-226)||(11949107-11949298)
chr3 (107-306)||(14290634-14290833)
chr3 (28-297)||(16326818-16327089)
chr3 (28-295)||(28757068-28757335)
chr3 (39-306)||(35982941-35983208)
chr3 (28-295)||(47126693-47126960)
chr3 (104-302)||(12857602-12857800)
chr3 (176-294)||(16825393-16825511)
chr3 (104-297)||(13317680-13317873)
chr3 (35-297)||(17494403-17494664)
chr3 (28-228)||(10417225-10417425)
chr3 (170-306)||(11958283-11958419)
chr3 (136-297)||(15008695-15008853)
chr3 (35-297)||(12181100-12181362)
chr3 (209-295)||(2037025-2037111)
chr3 (209-295)||(2040766-2040852)
chr3 (164-270)||(11861228-11861334)
chr3 (144-270)||(12501788-12501914)
chr3 (209-295)||(14039676-14039762)
chr3 (208-270)||(15065990-15066052)
chr3 (104-310)||(15230428-15230634)
chr3 (104-310)||(15236296-15236502)
chr3 (208-270)||(23079166-23079228)
chr3 (208-270)||(23414939-23415001)
chr3 (28-79)||(13317863-13317914)
chr3 (215-270)||(17497617-17497672)
chr3 (208-297)||(19727679-19727768)
chr3 (215-295)||(12843227-12843307)
chr3 (218-270)||(14873734-14873786)
[»] chr5 (20 HSPs)
chr5 (24-309)||(17266387-17266672)
chr5 (28-295)||(25851106-25851373)
chr5 (28-295)||(20345316-20345583)
chr5 (28-297)||(22505713-22505982)
chr5 (162-295)||(14884058-14884191)
chr5 (28-297)||(23077970-23078239)
chr5 (35-293)||(23563237-23563495)
chr5 (208-297)||(21870343-21870432)
chr5 (208-297)||(21874623-21874712)
chr5 (208-270)||(18782346-18782408)
chr5 (218-270)||(23526293-23526345)
chr5 (209-295)||(16258103-16258189)
chr5 (218-276)||(21883017-21883075)
chr5 (209-295)||(22591822-22591908)
chr5 (209-295)||(22595377-22595463)
chr5 (215-310)||(21983229-21983324)
chr5 (164-270)||(20803785-20803891)
chr5 (215-297)||(21561090-21561172)
chr5 (164-228)||(20779083-20779147)
chr5 (28-108)||(20824487-20824567)
[»] scaffold0765 (1 HSPs)
scaffold0765 (28-309)||(6131-6412)
[»] chr8 (16 HSPs)
chr8 (28-309)||(22054049-22054330)
chr8 (28-297)||(22027606-22027875)
chr8 (28-295)||(16268552-16268819)
chr8 (107-295)||(19985445-19985633)
chr8 (104-303)||(22374131-22374330)
chr8 (28-295)||(28984097-28984364)
chr8 (107-306)||(21928693-21928892)
chr8 (36-309)||(31413846-31414119)
chr8 (28-297)||(29300752-29301021)
chr8 (68-297)||(6606795-6607024)
chr8 (218-270)||(21163883-21163935)
chr8 (215-299)||(22523883-22523967)
chr8 (208-270)||(30310497-30310559)
chr8 (215-270)||(21391214-21391269)
chr8 (215-270)||(21780540-21780595)
chr8 (28-83)||(28989316-28989371)
[»] scaffold0114 (1 HSPs)
scaffold0114 (28-309)||(40207-40488)
[»] scaffold0239 (1 HSPs)
scaffold0239 (19-309)||(9661-9951)
[»] scaffold0005 (1 HSPs)
scaffold0005 (28-309)||(263375-263656)
[»] scaffold0348 (2 HSPs)
scaffold0348 (40-309)||(4723-4992)
scaffold0348 (28-303)||(17364-17639)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-309)||(203530-203811)
[»] scaffold0067 (4 HSPs)
scaffold0067 (28-309)||(64476-64757)
scaffold0067 (28-309)||(49054-49335)
scaffold0067 (28-309)||(58088-58369)
scaffold0067 (29-297)||(29774-30042)
[»] scaffold0222 (2 HSPs)
scaffold0222 (28-297)||(373-642)
scaffold0222 (35-306)||(20970-21241)
[»] scaffold0020 (2 HSPs)
scaffold0020 (32-297)||(98469-98734)
scaffold0020 (104-306)||(176212-176414)
[»] scaffold0058 (1 HSPs)
scaffold0058 (28-303)||(22271-22546)
[»] scaffold0076 (1 HSPs)
scaffold0076 (28-309)||(53297-53578)
[»] scaffold0235 (2 HSPs)
scaffold0235 (20-309)||(8336-8625)
scaffold0235 (20-309)||(18550-18839)
[»] scaffold0029 (3 HSPs)
scaffold0029 (68-266)||(115751-115949)
scaffold0029 (28-269)||(93808-94049)
scaffold0029 (218-267)||(8553-8602)
[»] scaffold1914 (1 HSPs)
scaffold1914 (167-309)||(1104-1246)
[»] chr6 (24 HSPs)
chr6 (28-302)||(21567014-21567288)
chr6 (35-297)||(19437993-19438255)
chr6 (20-297)||(14376944-14377221)
chr6 (20-297)||(18797666-18797943)
chr6 (35-266)||(34642645-34642876)
chr6 (68-306)||(24515433-24515671)
chr6 (87-297)||(21474643-21474853)
chr6 (71-297)||(10465876-10466102)
chr6 (28-295)||(24367384-24367651)
chr6 (28-252)||(15462320-15462544)
chr6 (219-306)||(25771019-25771106)
chr6 (179-297)||(19456158-19456276)
chr6 (179-297)||(19466303-19466421)
chr6 (209-306)||(16813805-16813902)
chr6 (209-297)||(8720733-8720821)
chr6 (215-309)||(23081594-23081688)
chr6 (162-249)||(27559045-27559132)
chr6 (208-270)||(21764976-21765038)
chr6 (213-263)||(24292844-24292894)
chr6 (220-270)||(25756670-25756720)
chr6 (209-310)||(19486309-19486410)
chr6 (143-228)||(20010599-20010684)
chr6 (208-297)||(30678052-30678141)
chr6 (218-270)||(22437043-22437095)
[»] scaffold0072 (1 HSPs)
scaffold0072 (35-310)||(54203-54478)
[»] scaffold0023 (2 HSPs)
scaffold0023 (20-297)||(164287-164564)
scaffold0023 (218-270)||(30487-30539)
[»] scaffold0074 (1 HSPs)
scaffold0074 (86-297)||(15279-15490)
[»] scaffold1299 (1 HSPs)
scaffold1299 (24-302)||(1729-2007)
[»] scaffold0664 (1 HSPs)
scaffold0664 (107-297)||(7266-7456)
[»] scaffold0420 (1 HSPs)
scaffold0420 (20-310)||(8755-9045)
[»] scaffold0203 (1 HSPs)
scaffold0203 (36-273)||(764-1001)
[»] scaffold0034 (3 HSPs)
scaffold0034 (137-309)||(11780-11952)
scaffold0034 (35-306)||(1829-2100)
scaffold0034 (28-274)||(70521-70767)
[»] scaffold0476 (1 HSPs)
scaffold0476 (28-297)||(431-700)
[»] scaffold0004 (2 HSPs)
scaffold0004 (35-309)||(325863-326136)
scaffold0004 (170-309)||(319534-319673)
[»] chr1 (18 HSPs)
chr1 (35-309)||(20832843-20833117)
chr1 (28-297)||(21961193-21961462)
chr1 (28-297)||(24096570-24096839)
chr1 (35-309)||(21742495-21742769)
chr1 (28-295)||(20074666-20074933)
chr1 (28-297)||(52988907-52989176)
chr1 (143-295)||(20297664-20297816)
chr1 (28-295)||(38909783-38910050)
chr1 (28-295)||(48426039-48426306)
chr1 (68-309)||(21738979-21739220)
chr1 (28-295)||(37680215-37680482)
chr1 (35-297)||(22015700-22015962)
chr1 (162-297)||(31536952-31537087)
chr1 (143-297)||(19857555-19857709)
chr1 (208-270)||(21228538-21228600)
chr1 (206-306)||(16379407-16379507)
chr1 (209-297)||(18273114-18273202)
chr1 (143-228)||(20853784-20853869)
[»] scaffold0053 (2 HSPs)
scaffold0053 (28-270)||(65211-65453)
scaffold0053 (35-309)||(62646-62920)
[»] scaffold0010 (3 HSPs)
scaffold0010 (35-309)||(39207-39481)
scaffold0010 (208-270)||(14753-14815)
scaffold0010 (71-269)||(180753-180951)
[»] scaffold0523 (2 HSPs)
scaffold0523 (35-309)||(5596-5870)
scaffold0523 (162-243)||(11683-11764)
[»] scaffold0156 (1 HSPs)
scaffold0156 (35-309)||(37095-37369)
[»] scaffold0751 (1 HSPs)
scaffold0751 (35-309)||(5337-5610)
[»] scaffold0706 (1 HSPs)
scaffold0706 (35-274)||(5118-5357)
[»] scaffold0317 (1 HSPs)
scaffold0317 (35-297)||(2787-3049)
[»] scaffold0046 (1 HSPs)
scaffold0046 (35-306)||(70264-70535)
[»] scaffold0243 (1 HSPs)
scaffold0243 (35-297)||(9658-9920)
[»] scaffold0192 (1 HSPs)
scaffold0192 (104-309)||(29752-29957)
[»] scaffold0108 (1 HSPs)
scaffold0108 (35-297)||(50261-50523)
[»] scaffold0054 (1 HSPs)
scaffold0054 (35-297)||(63405-63667)
[»] scaffold0367 (1 HSPs)
scaffold0367 (35-309)||(8895-9169)
[»] scaffold1426 (1 HSPs)
scaffold1426 (28-295)||(1495-1762)
[»] scaffold1433 (1 HSPs)
scaffold1433 (68-306)||(1188-1426)
[»] scaffold0404 (1 HSPs)
scaffold0404 (68-306)||(7933-8171)
[»] scaffold0056 (1 HSPs)
scaffold0056 (35-297)||(769-1031)
[»] scaffold0104 (1 HSPs)
scaffold0104 (35-306)||(43296-43567)
[»] scaffold0167 (1 HSPs)
scaffold0167 (35-297)||(5209-5471)
[»] scaffold0106 (1 HSPs)
scaffold0106 (35-297)||(34493-34755)
[»] scaffold0102 (1 HSPs)
scaffold0102 (104-297)||(42923-43116)
[»] scaffold1530 (1 HSPs)
scaffold1530 (176-309)||(801-934)
[»] scaffold1056 (1 HSPs)
scaffold1056 (107-306)||(1949-2147)
[»] scaffold2062 (1 HSPs)
scaffold2062 (35-309)||(746-1025)
[»] scaffold1032 (1 HSPs)
scaffold1032 (35-310)||(688-963)
[»] scaffold0041 (1 HSPs)
scaffold0041 (28-295)||(41884-42151)
[»] scaffold0266 (1 HSPs)
scaffold0266 (68-309)||(16826-17067)
[»] scaffold0017 (2 HSPs)
scaffold0017 (135-297)||(4339-4501)
scaffold0017 (162-270)||(16979-17087)
[»] scaffold0405 (1 HSPs)
scaffold0405 (101-297)||(5824-6020)
[»] scaffold0118 (1 HSPs)
scaffold0118 (28-295)||(610-877)
[»] scaffold0001 (1 HSPs)
scaffold0001 (162-297)||(514239-514374)
[»] scaffold0865 (1 HSPs)
scaffold0865 (87-309)||(1146-1368)
[»] scaffold0133 (1 HSPs)
scaffold0133 (87-309)||(28159-28381)
[»] scaffold0079 (1 HSPs)
scaffold0079 (104-270)||(36723-36889)
[»] scaffold0026 (1 HSPs)
scaffold0026 (70-306)||(51842-52078)
[»] scaffold0146 (1 HSPs)
scaffold0146 (35-297)||(170-432)
[»] scaffold0035 (1 HSPs)
scaffold0035 (143-297)||(6069-6223)
[»] scaffold1517 (1 HSPs)
scaffold1517 (28-297)||(1373-1642)
[»] scaffold0434 (1 HSPs)
scaffold0434 (208-309)||(5776-5877)
[»] scaffold0335 (1 HSPs)
scaffold0335 (29-297)||(4190-4458)
[»] scaffold0310 (1 HSPs)
scaffold0310 (72-297)||(11170-11395)
[»] scaffold0276 (1 HSPs)
scaffold0276 (162-295)||(23811-23944)
[»] scaffold0011 (1 HSPs)
scaffold0011 (101-309)||(153714-153922)
[»] scaffold2165 (1 HSPs)
scaffold2165 (162-297)||(689-824)
[»] scaffold0151 (1 HSPs)
scaffold0151 (170-297)||(428-555)
[»] scaffold1845 (1 HSPs)
scaffold1845 (208-297)||(1190-1279)
[»] scaffold0309 (1 HSPs)
scaffold0309 (68-233)||(12916-13081)
[»] scaffold0031 (1 HSPs)
scaffold0031 (208-305)||(115953-116050)
[»] scaffold0188 (1 HSPs)
scaffold0188 (213-297)||(33258-33342)
[»] scaffold0080 (1 HSPs)
scaffold0080 (218-270)||(32218-32270)
[»] scaffold0518 (1 HSPs)
scaffold0518 (246-297)||(2198-2249)
[»] scaffold0190 (1 HSPs)
scaffold0190 (218-297)||(30212-30291)
[»] scaffold0088 (1 HSPs)
scaffold0088 (28-243)||(30083-30298)
[»] scaffold0443 (2 HSPs)
scaffold0443 (162-243)||(12080-12161)
scaffold0443 (28-83)||(11958-12013)
[»] scaffold0068 (1 HSPs)
scaffold0068 (36-297)||(66994-67255)
[»] scaffold0042 (1 HSPs)
scaffold0042 (218-270)||(36733-36785)
[»] scaffold0009 (2 HSPs)
scaffold0009 (221-297)||(251961-252037)
scaffold0009 (208-294)||(229741-229827)
[»] scaffold0819 (1 HSPs)
scaffold0819 (218-269)||(453-504)
[»] scaffold0181 (1 HSPs)
scaffold0181 (162-249)||(28862-28949)
[»] scaffold0081 (2 HSPs)
scaffold0081 (219-270)||(21944-21995)
scaffold0081 (219-270)||(37368-37419)
[»] scaffold0451 (1 HSPs)
scaffold0451 (208-270)||(13945-14007)
[»] scaffold0261 (2 HSPs)
scaffold0261 (177-243)||(12352-12418)
scaffold0261 (177-243)||(20532-20598)
[»] scaffold0044 (1 HSPs)
scaffold0044 (208-270)||(17489-17551)
[»] scaffold0546 (1 HSPs)
scaffold0546 (101-270)||(101-270)
[»] scaffold0109 (1 HSPs)
scaffold0109 (101-270)||(13037-13206)
[»] scaffold0609 (1 HSPs)
scaffold0609 (136-308)||(1196-1368)
[»] scaffold0490 (1 HSPs)
scaffold0490 (229-309)||(3215-3295)
[»] scaffold0447 (1 HSPs)
scaffold0447 (215-299)||(1748-1832)
[»] scaffold0383 (1 HSPs)
scaffold0383 (215-299)||(4612-4696)
[»] scaffold0273 (1 HSPs)
scaffold0273 (218-270)||(379-431)
[»] scaffold1423 (1 HSPs)
scaffold1423 (215-270)||(291-346)
[»] scaffold0611 (1 HSPs)
scaffold0611 (215-270)||(9356-9411)
[»] scaffold0412 (1 HSPs)
scaffold0412 (87-270)||(15492-15675)
[»] scaffold0165 (1 HSPs)
scaffold0165 (70-201)||(12151-12282)
[»] scaffold0139 (1 HSPs)
scaffold0139 (35-130)||(19022-19117)
[»] scaffold0120 (1 HSPs)
scaffold0120 (215-270)||(14420-14475)
[»] scaffold1881 (1 HSPs)
scaffold1881 (208-270)||(393-455)
[»] scaffold1220 (1 HSPs)
scaffold1220 (164-270)||(21-127)
[»] scaffold0708 (1 HSPs)
scaffold0708 (28-310)||(5018-5300)
[»] scaffold0289 (1 HSPs)
scaffold0289 (208-270)||(117-179)
[»] scaffold0285 (1 HSPs)
scaffold0285 (208-270)||(5327-5389)
[»] scaffold0270 (2 HSPs)
scaffold0270 (215-297)||(7209-7291)
scaffold0270 (215-297)||(14339-14421)
[»] scaffold0177 (2 HSPs)
scaffold0177 (208-270)||(11269-11331)
scaffold0177 (208-270)||(14954-15016)
[»] scaffold0100 (1 HSPs)
scaffold0100 (215-297)||(16495-16577)
[»] scaffold0077 (1 HSPs)
scaffold0077 (215-297)||(57500-57582)
[»] scaffold0040 (1 HSPs)
scaffold0040 (215-309)||(18181-18275)
[»] scaffold0501 (1 HSPs)
scaffold0501 (218-270)||(263-315)
[»] scaffold0297 (1 HSPs)
scaffold0297 (218-270)||(7570-7622)
[»] scaffold0006 (1 HSPs)
scaffold0006 (215-295)||(104562-104642)


Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 24 - 309
Target Start/End: Original strand, 12577100 - 12577385
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12577100 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 12577199  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12577200 atagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 12577299  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  12577300 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 12577385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 309
Target Start/End: Complemental strand, 19716717 - 19716428
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||||||||||||||| | |||||| || |||||||  || |    
T  19716717 tcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgc 19716618  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||||||||  ||||||||||| |||||  |||| || ||||| |||||||||||||||||||||||||| || |||||||| |||||    
T  19716617 agttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattact 19716518  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||||||||||  |||| || ||||||||||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  19716517 cttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctt 19716428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 309
Target Start/End: Complemental strand, 19721280 - 19720991
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||||||||||||||| | |||||| || |||||||  || |    
T  19721280 tcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgc 19721181  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||||||||  ||||||||||| |||||  |||| || ||||| |||||||||||||||||||||||||| || |||||||| |||||    
T  19721180 agttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattact 19721081  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||||||||||  |||| || ||||||||||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  19721080 cttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctt 19720991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 23097710 - 23097436
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||  ||||| |||||| ||||| |||||||| | ||||||||| ||||| |||| |||||||||     
T  23097710 agtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataa 23097611  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| | |||||| |  || |   |||| || ||||| |||||| |||| |||||||||| ||| ||||||||||| ||||| |||||||    
T  23097610 caaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggc 23097511  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtc 302  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| | || ||||||||||||||||| ||||    
T  23097510 ctttctcgccacacttaaagcaaactatctcagcaggagcatctctcctcttgggcctcctctcatcattcagtc 23097436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 23274352 - 23274613
Alignment:
Q  36 taccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaac 135  Q
    ||||||||| |||||| ||||| ||||||   |||||||||||||| ||||||||||| | |||||| || ||||| ||||| || ||||||||  | |     
T  23274352 taccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaactat 23274451  T
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
     || || ||||| ||||| ||||   |||| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||     
T  23274452 gtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctca 23274551  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||    || || || |||| ||||||||||||| | || |||||||||||||||||    
T  23274552 ccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatt 23274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 274
Target Start/End: Original strand, 20848340 - 20848585
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  20848340 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 20848439  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  20848440 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 20848539  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctc 274  Q
    ||||||| ||||||||  | || || |||||| ||||||||||||||    
T  20848540 ctttctcaccacacttgtagca-acaatctcaacaggagcatctctc 20848585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 270
Target Start/End: Complemental strand, 24705130 - 24704932
Alignment:
Q  72 ccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccctt 171  Q
    ||||||| |||||  ||||||||| ||  |||||||||||||||||||||||  ||||  |||  |||   ||||||||||| ||||   ||||||||||    
T  24705130 ccttcttaggctgcttgcactgagaacctatgtgaccctcttcattacaattgaagcacacaatgtcattacgcttgcaatcagctaaagtgtgaccctt 24705031  T
Q  172 ctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||  ||||||  |||||| |||||  | ||||  | |||||| || ||||||||||||||||| ||||| || ||||| |  |||||||||||| ||||    
T  24705030 cttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 28350807 - 28350895
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||| |||||||||||||||||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||||    
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcatt 28350895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 11351330 - 11351161
Alignment:
Q  101 atgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcat 200  Q
    |||||||||||||| || |||||  ||||  ||| |||||   |||||||||| ||||   | ||||||||||  ||||||| |||||| ||||   | |    
T  11351330 atgtgaccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacct 11351231  T
Q  201 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||| | |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  11351230 cctttggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 24657216 - 24657108
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    ||||||||||||  ||||||| ||||||||||||| | ||||  | ||||||  ||||||||||||||||||| ||||| || |||||    ||||||||    
T  24657216 tgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagc 24657117  T
Q  262 aggagcatc 270  Q
    |||| ||||    
T  24657116 aggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 21320505 - 21320459
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcagg 264  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    
T  21320505 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagg 21320459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    |||||| |||||||||||||||||||||||||| || ||||| || ||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    |||||| |||||||||||||||||||||||||| || ||||| || ||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 23116571 - 23116509
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||| ||||||| || ||||| || ||||| | |||||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatc 23116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 21901469 - 21901566
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || ||||||| |||| |||||||  | || || |||||||||||||| | ||||||    
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctg 21901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 23028963 - 23028912
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| | |||||| || |||||||||||||||||    
T  23028963 ctcttgtggcctttctcaccacaat-aaaacagacaatctcagcaggagcatc 23028912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 23105421 - 23105393
Alignment:
Q  27 cagtctgtgtaccagtcaaagcaaaaact 55  Q
    |||||||||||||||||||||||||||||    
T  23105421 cagtctgtgtaccagtcaaagcaaaaact 23105393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 24678428 - 24678480
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  24678428 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 24678480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 18051096 - 18050811
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18051096 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 18050997  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18050996 ataacatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 18050897  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  18050896 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 18050811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 14283513 - 14283232
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| ||||| |||||   |||||||||||||||||||| |||||| || ||||| ||||||||||| || || |||||     
T  14283513 agtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgggcactgtgtgctgatatgaccctcttcgttgcagttataa 14283414  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| |||||||||| ||||||||||| ||||   ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  14283413 catacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggc 14283314  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||  |||| || | ||||||||||||||||||| ||   ||||||||||||||||| |||||||||||    
T  14283313 ctttctcgccacacttgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctgctt 14283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 132 - 309
Target Start/End: Original strand, 14144875 - 14145052
Alignment:
Q  132 caacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggccttt 231  Q
    |||||||||| ||||||||||| |||| || ||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  14144875 caacatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggccttt 14144974  T
Q  232 ctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  14144975 ctcgccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgctt 14145052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 11385568 - 11385294
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||  ||||| |||||| || || |||||||| | ||||||||| ||||| |||| |||||||||     
T  11385568 agtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggttgagtgcactgtgaactgatgtggccctcctcatcacaattataa 11385469  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| | |||||| |  || |   |||| || ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||||||    
T  11385468 caaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggc 11385369  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtc 302  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| | || ||||| ||||||||||| ||||    
T  11385368 ctttctcgccacacttatagcaaactatctcagcaggagcatctctcctcttgggccttctctcatcattcagtc 11385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 12712762 - 12712564
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    |||||||||||| | || |||||||||| | |||| ||||||||  |||| || ||||||||| ||| |||||| || |||||||| |||| || |||||    
T  12712762 ctaaccttcttccgttgagtgcactgagaattgatatgaccctccccattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgac 12712663  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggag 266  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||| ||||||    
T  12712662 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggag 12712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 14140789 - 14140919
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||     
T  14140789 agtctgcgtaccagtcaaagcaaataccttcccaccagttctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcgttacaattataa 14140888  T
Q  128 catccaacatcaccgcgcttgcaatcggcta 158  Q
    ||| |||||||||| ||||||||||| ||||    
T  14140889 catacaacatcaccacgcttgcaatcagcta 14140919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 13676568 - 13676830
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||   ||||||||||||||| ||||  ||||| | |||||| || ||||| ||||| || ||||||||  | |    
T  13676568 gtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaacta 13676667  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| ||||| ||||   |||| ||||||||||||||||||||  ||||||||||||| ||   |||||| |||||||||||||||||||     
T  13676668 tgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttctt 13676767  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||  | || || |||||| |||||||||||||| | || |||||||||||||||||    
T  13676768 accacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcatt 13676830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 297
Target Start/End: Complemental strand, 15099702 - 15099473
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||||||||| || ||||| | |||||| ||||| || ||||| || ||||| ||  | |  || || ||||| |||||  ||||  |||| |    
T  15099702 ctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtc 15099603  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    ||||||| ||||||||||| ||||||||||||||  |   ||||||||||||||||||||||||||| |||||||| || || ||||| |||| ||||||    
T  15099602 ccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagc 15099503  T
Q  268 atctctcttattcggcctcctctcatcatt 297  Q
    ||||||| | || ||||||||| |||||||    
T  15099502 atctctcctcttgggcctcctcccatcatt 15099473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 13965807 - 13965540
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || || ||||||  |||| ||||||||||||  |  ||||| | |||||| ||||||||| |||| ||||| |||    
T  13965807 agtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtag 13965708  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || |||||  ||||||||||||| ||||||||||| || ||  | ||||| ||   |||||| ||||||||||||     
T  13965707 cagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggt 13965608  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | ||  | ||||||||||||||||||||| | || |||||||| ||||||    
T  13965607 ctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 12798633 - 12798362
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| |||||||| || |||||    ||| ||||||| |||||||| ||||| | |||||| ||||| ||||||||||| || |||||  |||    
T  12798633 gtaccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaa 12798534  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
    |||| || ||||  ||||| ||||   |||| || ||||| ||||||||||| ||||||||||||| || ||| |||||| |||||||||||||||||      
T  12798533 catccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat-ctcggtcacaaacattactcttgtggccttt-- 12798437  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
      |||||||| ||||| || || |||| | ||||||||||| | ||  |||||||||||||||| | |||||||||    
T  12798436 -tccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgctt 12798362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 295
Target Start/End: Complemental strand, 26115722 - 26115462
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || |||||||||  ||||  ||||||||| |  |  ||||| ||||| || ||||| ||| |||| ||||| || ||  |||    
T  26115722 gtaccagtcaaagcaaacacctttccaccagttctagtcttcttcggttcaggacactgtgtactaatatgaccttctccattgcaattgtaacagacaa 26115623  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| ||||||||||||||||||||    
T  26115622 tgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctc 26115523  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
     ||||||||  |||| || |||||||| |||||||||||| | || |||||||| ||||||    
T  26115522 accacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatca 26115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 26091937 - 26091670
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  26091937 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 26091838  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  26091837 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 26091738  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  26091737 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 21755522 - 21755789
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || || || |||  |||||||||||||||||  |  ||||| |  || || ||||||||| |||| || || |||    
T  21755522 agtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggctcaggacactgtgagctaatatgaccctctccattgcagttgtag 21755621  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || ||||| || || ||||   ||||||||||||| |||||||||||||||||| ||||||| ||   |||||| || ||||||||||    
T  21755622 cagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggc 21755721  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    |||| || ||||||||  |||| || |||||||  |||||||||||| | || |||||| | ||||||    
T  21755722 ctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatca 21755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 40924956 - 40924689
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || ||||| |||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  40924956 agtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 40924857  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  40924856 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 40924757  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  40924756 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 288
Target Start/End: Original strand, 49155411 - 49155671
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  49155411 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 49155510  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   | ||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  49155511 cagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 49155610  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcct 288  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || ||||||||    
T  49155611 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 297
Target Start/End: Original strand, 12459781 - 12460007
Alignment:
Q  71 accttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccct 170  Q
    |||||||||||||| || ||||| | ||| || ||||| |||||||| || ||||||||  |||  || || ||||| || || |||||  |||| ||||    
T  12459781 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 12459880  T
Q  171 tctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||| |||||||| ||||| ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || |||||||||||| ||||    
T  12459881 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 12459980  T
Q  271 tctcttattcggcctcctctcatcatt 297  Q
    |||| | || |||||||| ||||||||    
T  12459981 tctcctcttgggcctcctatcatcatt 12460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 19150128 - 19150390
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| ||||| |  ||| ||||||| || || || ||||| | ||| || || || ||||||||||| || |||||  |||    
T  19150128 gtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaacaa 19150227  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
     ||| || ||||||||||| || |   |||| || ||||| |||||||| || |||||||||| ||| | | | ||| || ||||| |||||||||||||    
T  19150228 tatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatc-tcgatcacacacattactgttgtggcctttct 19150326  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | |||||||| || || || || |||| ||||||||||||| | || |||||||||||||||||    
T  19150327 caccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcatt 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 20749527 - 20749789
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| ||||| |  ||| ||||||| || || || ||||| | ||| || || || ||||||||||| || |||||  |||    
T  20749527 gtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaacaa 20749626  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
     ||| || ||||||||||| || |   |||| || ||||| |||||||| || |||||||||| ||| | | | ||| || ||||| |||||||||||||    
T  20749627 tatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatc-tcgatcacacacattactgttgtggcctttct 20749725  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | |||||||| || || || || |||| ||||||||||||| | || |||||||||||||||||    
T  20749726 caccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcatt 20749789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 16947611 - 16947330
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||||| |||| ||||| ||||| |||||   |||| |||||||| ||||  | ||||| | |||||| ||||||||||| || || || |||    
T  16947611 agtctgcgtaccattcaatgcaaacactttcccaccggttctagccttcttcagctgaatacactgtgaactgatatgaccctcttcgttgcagttgtag 16947512  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| || ||||| |||||||| | ||||||| |||||||  |   |||| | |||||||||||||    
T  16947511 caaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctaccacaagcattactcttgtggc 16947412  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||| || ||||||||  |||| || || ||| | |||||||||||| | || ||||| ||||||||||| | |||||||||    
T  16947411 ctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattcattctctgctt 16947330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 310
Target Start/End: Original strand, 13024454 - 13024736
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| |||||    ||| ||||||||||||| || ||||||| |||||| ||||| ||||| || || || |||    
T  13024454 agtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactgagaactgatatgaccttcttcgttgcagttgtag 13024553  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| || ||||  |||||||||||||| ||| ||||||   |   | || | || || |||||||    
T  13024554 cagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggc 13024653  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
    |||| || ||||||||  |||| || || |||||||||||||||||| | || |||||||| |||||||| |  |||||||||    
T  13024654 ctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttc 13024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 295
Target Start/End: Original strand, 9591549 - 9591740
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||||||||||||||||||  ||||  ||| ||||   ||||||||||| ||||  || ||||||||||  ||||||| || ||| |||||    || |    
T  9591549 tgaccctcttcattacaattgaagcacacaatatcatttcgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctctt 9591648  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
      | |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  |||| || |||| ||| ||||||    
T  9591649 caggacaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatca 9591740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 14261198 - 14261108
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctct 305  Q
    |||||||||||||||||||| |||||||| || || |  ||||||| |||||||| ||||   || ||||||||||||||||| |||||||    
T  14261198 ttactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctct 14261108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 12203760 - 12203670
Alignment:
Q  207 tacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||| |||||||||||||| ||||| ||||||||  | || || ||| |||||||| |||||||| | || || ||||||||||||||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcatt 12203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 16726422 - 16726360
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||| ||||||| || ||||| || || || |||||||||||    
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 16726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 17703436 - 17703374
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||| ||||||| || ||||| || || || |||||||||||    
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 17703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 258; Significance: 1e-143; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 53750626 - 53750341
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53750626 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaatt 53750527  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53750526 atagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 53750427  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  53750426 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 53750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 51603948 - 51603663
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51603948 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaatt 51603849  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51603848 atagcacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 51603749  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  51603748 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 51603663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 16150763 - 16151025
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| |||||   ||||||||||||||| |   |||| || |  || || || |||||||||| ||| ||||||||  |||    
T  16150763 gtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaa 16150862  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| ||||||||||| |||||  |||| || ||||| ||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||    
T  16150863 catcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctc 16150962  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||| | || || || ||| |||||||||||||| | || |||||||||||||||||    
T  16150963 gccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcatt 16151025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 16154909 - 16155171
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| |||||   ||||||||||||||| |   |||| || |  || || || |||||||||| ||| ||||||||  |||    
T  16154909 gtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaa 16155008  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| ||||||||||| |||||  |||| || ||||| ||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||    
T  16155009 catcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctc 16155108  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||| | || || || ||| |||||||||||||| | || |||||||||||||||||    
T  16155109 gccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcatt 16155171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 297
Target Start/End: Original strand, 20893151 - 20893420
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||  |||||||||||||||||  || ||||| | |||||| || ||||||||||| || || |||    
T  20893151 agtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtag 20893250  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
     |  ||| ||| || |||||||| || ||||   |||| |||||||| ||||||||||| |||||| |||||||  |   |||||| || ||||||| ||    
T  20893251 tagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgc 20893350  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || ||||||||  |||| || ||||||| ||||||||||||| | || |||||||| ||||||||    
T  20893351 ctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcatt 20893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 104 - 306
Target Start/End: Original strand, 15073555 - 15073757
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| ||||||||||||  |||||||||   |||||||||| ||||   |||| || |||| ||||||||| |||||||||||||||||      
T  15073555 tgaccttcttcatcacaattatagcaaacaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcac 15073654  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
     |  ||| || ||||||||||||||||| || |||||||| ||||| || ||||||| ||||||||||||| |  | ||||||||||||||||| |||||    
T  15073655 ggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtct 15073754  T
Q  304 ctg 306  Q
    |||    
T  15073755 ctg 15073757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 274
Target Start/End: Original strand, 27903505 - 27903751
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||| | |  ||| |||||||| || || |||||||| | ||| ||||  ||||| |||||||| |||||     
T  27903505 agtctgcgtaccagtcaaagcaaatacttttcctcaagttctgaccttcttaggttgcgtgcactgtgaactaatgttgccctcctcattacagttataa 27903604  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || || | ||  ||||| ||||| ||||| |||||||||||||||||||| ||||| || || |||||||||||||    
T  27903605 caaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggc 27903704  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctc 274  Q
    ||||| | ||||||||  |||| || |  ||| ||||||||||||||    
T  27903705 ctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctc 27903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 7357387 - 7357654
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||||||||||||||| ||||| || || |||| |  |||| ||||||||||||  |  ||||| | ||| || ||||||||| |||| || || |||    
T  7357387 agtctgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgtag 7357486  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| ||||||| ||   | |||| || ||||||||||    
T  7357487 cagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaacattgctcttgtggc 7357586  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| |||| |||  |||| || ||||||||||||||||||||| | || |||||||| ||||||    
T  7357587 ctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 11204377 - 11204115
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || ||||||  |||| |||| |||||||  |  ||||| | |||||| ||||||||| |||| ||||| |||||  |||    
T  11204377 gtaccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtagcagacaa 11204278  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
     ||| || |||||||| |  |||||  ||||||||||||| ||||||||||| || ||  | |||||  |   |||||| || |||||||||||||||||    
T  11204277 tatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctc 11204178  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||| |||| || ||||||| ||||||||||||| | || || ||||| ||||||||    
T  11204177 accacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcatt 11204115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 14993512 - 14993238
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||| |||||||||| || || |||||    ||||||||||| || || || ||||| | |||||| ||||| || ||||| || || |||||  |||    
T  14993512 gtaccattcaaagcaaacaccttgccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcctcattgcagttgtagcaaacaa 14993413  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| ||  |||||||||| ||||   |||| || ||||| ||||||||||| ||||||||||  ||   |  |||||| ||||||||||||||||| ||    
T  14993412 catccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttc 14993313  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
     |||||||| ||||| || || |||| ||||||||||||| | || ||||||||||||||||| | |||||||||    
T  14993312 accacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgctt 14993238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 3261946 - 3261679
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  3261946 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 3261847  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  3261846 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 3261747  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  3261746 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 29450689 - 29450422
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || ||||| |||| ||||  |||||||||||  |  ||||| | |||||||||||| ||  |||| || || ||     
T  29450689 agtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatgtgaccttccccattgcagttgtaa 29450590  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| |||||||||||||||||| | |||||      |||||| |||||||||||||    
T  29450589 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaacattactcttgtggc 29450490  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  29450489 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatca 29450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 297
Target Start/End: Original strand, 18259630 - 18259830
Alignment:
Q  97 actgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttc 196  Q
    |||||| ||||| || ||||| || ||||||||  |||  || || ||||| ||||| |||||  |||| || ||||| ||||||||||| |||||||||    
T  18259630 actgatatgaccttcctcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttc 18259729  T
Q  197 tcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcat 296  Q
    |||||  |   |||||| ||||||||||||||||| || ||||||||||| || || || | || |||||||||| || | || ||||||||||||||||    
T  18259730 tcatctctatcacaaacattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcat 18259829  T
Q  297 t 297  Q
    |    
T  18259830 t 18259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 297
Target Start/End: Original strand, 15266936 - 15267165
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||||||||| || ||||  | |||||| ||||| ||||| || || ||||||||  |||  || ||  |||| ||||| |||||  |||| |    
T  15266936 ctaaccttcttcggctgcgtacactacgaactgatatgaccttcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtc 15267035  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    | ||||| ||||||||||| ||||||||||||||  ||  |||||| |||||||| ||||| |||||  ||||||| || || || || |  | ||||||    
T  15267036 ctttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagc 15267135  T
Q  268 atctctcttattcggcctcctctcatcatt 297  Q
    ||||||| | || |||||||||||||||||    
T  15267136 atctctcctcttgggcctcctctcatcatt 15267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 44659018 - 44658753
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||||| |||||||||| || |||||||||  ||||  ||||||||| |  |  ||||| | ||| || ||||  ||| |||| ||||| ||     
T  44659018 agtctgcgtaccattcaaagcaaacacctttccaccagttctagtcttcttcggttcaggacactgtgaactaatatgacattctccattgcaattgtaa 44658919  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  44658918 cagacaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 44658819  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcat 293  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||    
T  44658818 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 295
Target Start/End: Original strand, 13513546 - 13513737
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||||||||||||||||||  ||||  ||| ||||   ||||||||||| ||||  || ||||||||||  ||||||| || ||| |||||    || |    
T  13513546 tgaccctcttcattacaattgaagcacacaatatcatttcgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctctt 13513645  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
      | |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  |||| || |||| ||| ||||||    
T  13513646 caggacaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatca 13513737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||| ||||||||||||||||||||| || ||||| || ||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 18604531 - 18604469
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||||||||| |||||||| |  ||||| | |||||||||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatc 18604469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 16219495 - 16219579
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaa 299  Q
    |||||||| |||||||||||||||||  || | ||||  |||||| ||||||||||| ||||  | ||||||||||| |||||||    
T  16219495 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaa 16219579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 16222815 - 16222899
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaa 299  Q
    |||||||| |||||||||||||||||  || | ||||  |||||| ||||||||||| ||||  | ||||||||||| |||||||    
T  16222815 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaa 16222899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 14697408 - 14697490
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||| ||||||||||| |||||  || | || || |||||||||| ||||||| ||||  | |||||||||||||||||    
T  14697408 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcatt 14697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 8708978 - 8709079
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgct 308  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| ||||| |  | || || |||||||||||||| | ||| ||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  309 tc 310  Q
    ||    
T  8709078 tc 8709079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 24 - 309
Target Start/End: Original strand, 13944769 - 13945054
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13944769 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaatt 13944868  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13944869 atagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 13944968  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13944969 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 13945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 8744774 - 8744489
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  8744774 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggttgtgtgcactgagtactgatgtggccctcttcattacaatt 8744675  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8744674 atagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttg 8744575  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8744574 tgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 8744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 56 - 309
Target Start/End: Complemental strand, 16384724 - 16384471
Alignment:
Q  56 tttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcgg 155  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  16384724 tttccaccagttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcag 16384625  T
Q  156 ctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactat 255  Q
    | | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16384624 ccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacacttaaaacaaactat 16384525  T
Q  256 ctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16384524 ctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgctt 16384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 16831908 - 16831627
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||  ||||||||||||||||||||||||||| |||||||| || |||||||| || || |||||     
T  16831908 agtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataa 16831809  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| |||||||||| |||||||| || |||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  16831808 catacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggc 16831709  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16831708 ctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgctt 16831627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 31941659 - 31941921
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || ||||||   ||||||||||||||||| || ||||  | |||||| || ||||| ||||| |||||||| ||  |||    
T  31941659 gtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaacaa 31941758  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| |||||||| || |||||  |||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  31941759 catcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctc 31941858  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||  |||| || |||||||||||||||| |||| |||| |||||||||||||||||    
T  31941859 gccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcatt 31941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 17189130 - 17189404
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| |||||   ||||| |||||| ||||| || ||||| | ||||||||| ||||| |||| ||||||||| ||  |||    
T  17189130 gtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaa 17189229  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| | |||||| |  || | | |||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  17189230 catcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctc 17189329  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||| || || ||| |||||||||||||| | || | ||||||||||||||||| |||||||||    
T  17189330 gccacacttaaaacaaacaatatcaacaggagcatctctcctcttggacctcctctcatcattaaatctctgctt 17189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 31692558 - 31692296
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| || || ||||||   ||||||||||||||||| || ||||| | |||||| || ||||| ||||| || ||||| ||  |||    
T  31692558 gtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaacaa 31692459  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| | |||||| || |||||  |||| |||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  31692458 catcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctc 31692359  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||  |||| || |||||||||| ||||| |||| |||| |||||||||||||||||    
T  31692358 accacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcatt 31692296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 24190053 - 24190334
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| |||||  |||| |||||   ||||| |||||| ||||| || ||||| | ||||||||| ||||| |||| |||||||||     
T  24190053 agtctgcgtaccagtcaacgcaaactctttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataa 24190152  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| | |||||| |  || | | |||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  24190153 caaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggc 24190252  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| || || ||| |||||||||||||| | ||   ||||||||||||||| | |||||||||    
T  24190253 ctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttgtacctcctctcatcattcaatctctgctt 24190334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 12357900 - 12357638
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || ||||||||  |||    
T  12357900 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaa 12357801  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    | || || ||||| ||||| ||||   |||| || ||||| ||||||||||| |||||||||||||| ||   ||| || ||||||||||||||||| ||    
T  12357800 cgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttttc 12357701  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||  | || || ||||||||||||| ||||||| | || |||||||||||||||||    
T  12357700 gccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcatt 12357638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 306
Target Start/End: Complemental strand, 18131585 - 18131449
Alignment:
Q  170 ttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    ||||| ||||||||||| |||||||||||||| ||   |||||| |||||||||||||||||||||||||||||  | ||  | |||||| |||||||||    
T  18131585 ttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcat 18131486  T
Q  270 ctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||| | || ||||||||||||| ||| ||||||||    
T  18131485 ctctcctcttgggcctcctctcattattcagtctctg 18131449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 10408717 - 10408984
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  10408717 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 10408816  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  10408817 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 10408916  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||| ||  |||| || |||||||| |||||||||||| | || |||||||| ||||||    
T  10408917 ctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 11949298 - 11949107
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| ||||| |  ||||||||||||| ||  || |||||   |||||||||||| || ||||| || ||||||||  |||    
T  11949298 gtaccagtcagagcaaacactttaccaccgatcctaaccttcttcgtctacgtacactgcaaactgatgtgaccttcctcattgcagttatagcaaacaa 11949199  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtgg 226  Q
    |||| || ||||| ||||| ||||  ||||| || ||||| ||||| ||||| |||||||||||||| || |||||||| ||||||||||||    
T  11949198 catctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaacattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 14290833 - 14290634
Alignment:
Q  107 ccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttgg 206  Q
    |||||||||| ||||||||||||   |||||| || ||||| ||||| ||||   |||| || |||||||||||||| || ||||||||||||||         
T  14290833 ccctcttcatcacaattatagcaaataacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaat 14290734  T
Q  207 tacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
     ||| || |||||||||||||||||||| |||||||| || || |  ||||||| ||||||||||||| | || ||||||||||||||||| || |||||    
T  14290733 cacacacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 14290634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 16327089 - 16326818
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || |||||||||  |||||||||||||||||  || ||||| | |||||| ||||||||| |||| || || |||    
T  16327089 agtctgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgcagttgtag 16326990  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || ||||   |||| |||||||| |||||||||||||| ||| |||||||  |   |||||| || ||||||||||    
T  16326989 cagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggc 16326890  T
Q  228 ctttctcgccacacttaaaacacacta-tctcagcaggagca-tctctcttattcggcctcctctcatcatt 297  Q
    |||| || ||||||||| |||| || | |||||||||||||| |||||| | || || ||||| ||||||||    
T  16326889 ctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcatt 16326818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 28757068 - 28757335
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || ||||| |||| ||||  |||||||||||  |  ||||| | ||| || ||||| ||| |||| ||||| ||     
T  28757068 agtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactaatatgaccttctccattgcaattgtaa 28757167  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  28757168 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 28757267  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  28757268 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 306
Target Start/End: Original strand, 35982941 - 35983208
Alignment:
Q  39 cagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatc 138  Q
    ||||||||||||| || || |||||    ||||||||||| ||||| || || || | ||| || || || || |||||||| || |||||  ||| |||    
T  35982941 cagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaatatc 35983040  T
Q  139 accgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgcc 237  Q
     || ||||||||||| || |   |||| || ||||||||||| |||||||||||||||||||| | ||| ||| || |||||||||||||||||||| ||    
T  35983041 cccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcacc 35983139  T
Q  238 acacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    |||||| || || |  ||| ||| ||||||||||||| | || ||||||||||||||||| || |||||    
T  35983140 acacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 35983208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 47126693 - 47126960
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  47126693 agtctgcgtaccagtcaaagcaaacaccttaccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 47126792  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  47126793 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 47126892  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  47126893 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 12857800 - 12857602
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| |||||| |||||  ||| |||||  |||||||| || ||||  ||||| || |||| |||||| | ||||||||||||||||||      
T  12857800 tgaccttcttcatcacaattgtagcaaacaatatcacgacgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcac 12857701  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtc 302  Q
     |  ||| || |||||| ||||||| || || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| ||||    
T  12857700 agtcacatacattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtc 12857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 16825511 - 16825393
Alignment:
Q  176 ccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctct 275  Q
    ||||||||||| ||||||||||||||   |  |||||| ||||||||||||||||| || |||||||| ||||| || || |||| |||||||||||||     
T  16825511 ccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctca 16825412  T
Q  276 tattcggcctcctctcatc 294  Q
    | || ||||||||||||||    
T  16825411 tcttgggcctcctctcatc 16825393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 297
Target Start/End: Complemental strand, 13317873 - 13317680
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||||||| ||||| ||  | ||||| || ||||||||||| ||||  |  ||||| || || ||||| |||||||||||||||||||| |    
T  13317873 tgaccttcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatctt 13317774  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| ||||| ||||| |||||||||||  | ||||||||  |||| || |  ||| ||||||||||||||    | |||||||||||||||||    
T  13317773 tggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatt 13317680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 17494403 - 17494664
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||| || || ||||| | ||| || ||||| || || || || ||||||||  |||    
T  17494403 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactaatatgaccttcctcgttgcagttatagcaaacaa 17494502  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || | ||| || || |||||  |||| || ||||| ||||||||||  ||||||||||||||  |   |||||| ||||||||||||||||| ||    
T  17494503 tgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctgag-cacttcttctcatctctatcacaaacattactcttgtggcctttttc 17494601  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||| || || || || ||||||| | ||||||||||| | || |||||||||||||||||    
T  17494602 accacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 228
Target Start/End: Complemental strand, 10417425 - 10417225
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||| |||  ||| |||||||| || || | |||||| | ||| ||||||||||| |||  ||| ||| |     
T  10417425 agtctgcgtaccagtcaaagcaaatacttttcctccagttctgaccttcttaggttgcgggcactgcgaactaatgtgaccctcatcaccacagttaaaa 10417326  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || ||||||||||| || | ||  ||||| ||||| || || |||||||| ||||||||||| |  || ||| | |||||||||||||    
T  10417325 caaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 10417226  T
Q  228 c 228  Q
    |    
T  10417225 c 10417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 306
Target Start/End: Complemental strand, 11958419 - 11958283
Alignment:
Q  170 ttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    ||||| |||||||||||||||||| |||||||  |   |||| | || || ||||||||||| || ||||||||| |||| || || |||||||||||||    
T  11958419 ttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcat 11958320  T
Q  270 ctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||| | ||  ||||||| |||||||| | ||||||    
T  11958319 ctctcctcttaagcctcctatcatcattcattctctg 11958283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 15008853 - 15008695
Alignment:
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
    |||||| |||||||| || |||| | | || ||||||| |||||| | ||| ||||||| |||| | |||   ||||| ||||||||||||||| ||||     
T  15008853 atcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttctcctcaccattg---caaacattactcttgtggcctctctca 15008757  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||||    
T  15008756 ccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcatt 15008695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 12181100 - 12181362
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| ||||| |||||    |||||||||||||| || || ||||  | |||||| ||||| || |  || |||||||| ||  |||    
T  12181100 gtaccagtcaaagcaaacactttaccaccggtcctaaccttcttcggttgcgtacactacgaactgatatgaccttccttgttgcaattataacaaacaa 12181199  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || ||  |||| ||||| |||||  |||| || ||| | ||||| ||||| ||||||||||||||  |   ||| || ||||||||||||||||| ||    
T  12181200 tgtccccaagcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttc 12181299  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     |||||||| || || |  || |||| ||||||||||||| | || | |||||||||||||||    
T  12181300 accacacttgaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatt 12181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 2037111 - 2037025
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 2040852 - 2040766
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 11861228 - 11861334
Alignment:
Q  164 tgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcag 263  Q
    ||||||||||  ||||||| |||||| |||||| | ||||  | |||||| || ||||||||||||||||| ||||| || ||| | || ||||| ||||    
T  11861228 tgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcag 11861327  T
Q  264 gagcatc 270  Q
    |||||||    
T  11861328 gagcatc 11861334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 12501788 - 12501914
Alignment:
Q  144 gcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 243  Q
    |||||||||| ||||   ||||||||||||  ||||||| |||||| |||||  | ||||  | |||||| || ||||||||||||||||||||||| ||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  244 aaaacacactatctcagcaggagcatc 270  Q
     |||||    |||||||||||| ||||    
T  12501888 gaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 14039676 - 14039762
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 15065990 - 15066052
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||| |||||||||||||    
T  15065990 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcatc 15066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 310
Target Start/End: Original strand, 15230428 - 15230634
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| ||||||  ||||  ||| |||||| |||||||| || |||| | | || || ||||  ||||| | ||||||||| ||||||||      
T  15230428 tgaccttcttcatcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcac 15230527  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
       ||||||| |||||||||||||| || || ||||||||  | || || |||||||||||| ||||| |  | || ||||||||||||||||| | |||    
T  15230528 cattacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatct 15230627  T
Q  304 ctgcttc 310  Q
     ||||||    
T  15230628 ttgcttc 15230634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 310
Target Start/End: Original strand, 15236296 - 15236502
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| ||||||  ||||  ||| |||||| |||||||| || |||| | | || || ||||  ||||| | ||||||||| ||||||||      
T  15236296 tgaccttcttcatcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcac 15236395  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
       ||||||| |||||||||||||| || || ||||||||  | || || |||||||||||| ||||| |  | || ||||||||||||||||| | |||    
T  15236396 cattacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatct 15236495  T
Q  304 ctgcttc 310  Q
     ||||||    
T  15236496 ttgcttc 15236502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 23415001 - 23414939
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||||||| | || ||||| || ||||| |||||||||||    
T  23415001 acaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatc 23414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 13317914 - 13317863
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttc 79  Q
    |||||| ||||||||||||||||| ||||||||||||  ||| |||||||||    
T  13317914 agtctgcgtaccagtcaaagcaaacacttttccaccagttctgaccttcttc 13317863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 17497617 - 17497672
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  17497617 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 17497672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 19727679 - 19727768
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| |||||||||| ||||||||||| |||||  || | || || |||||||||  | ||||| |||| || |||||||||||||||||    
T  19727679 acaagcgttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcatt 19727768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 12843307 - 12843227
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| ||||  | |||| ||||||||||    
T  12843307 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatca 12843227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 14873786 - 14873734
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||| ||||||||||| ||||| |||||||| || ||||||||| |||||||    
T  14873786 ctcttatggcctttctcaccacaattaaaacagacaatctcagcatgagcatc 14873734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 17266672 - 17266387
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17266672 tagcagtctaggtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 17266573  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  17266572 atagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttg 17266473  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17266472 tgacctttctcgccacacttaaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 17266387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 25851106 - 25851373
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||  |||| ||||||||||||  |  ||||| | ||| || ||||||||| |||| || || |||    
T  25851106 agtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgtag 25851205  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||| | || |||||  ||||||||||||| ||||||||||| |||||| | ||||| ||   |||||| |||||||||||||    
T  25851206 cagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtggc 25851305  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| || ||||||||||| | || |||||||| ||||||    
T  25851306 ctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcctatcatca 25851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 20345316 - 20345583
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||||||| |||||||| || || ||||||  |||| ||||||||||||  |  ||||| | ||| || ||||| ||  |||| || || |||    
T  20345316 agtctgcgtaccagttaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccttccccattgcagttgtag 20345415  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| ||  ||||  ||||||||||||| ||||||||||| |||||| | ||||| ||   |||||| ||||||||||||     
T  20345416 cagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtggg 20345515  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  |||| || ||||||||||||||||||||| | || |||||||| ||||||    
T  20345516 ctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 297
Target Start/End: Original strand, 22505713 - 22505982
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || || || |||  ||||||||||||||| |  |  ||||| | |||||||||||||||| |||| || || |||    
T  22505713 agtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaactgatgtgaccctctccattgcagttgtag 22505812  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || ||||   | || ||| |||| ||||||||||| |||||| |||| || ||   |||||| || ||||||||||    
T  22505813 cagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggc 22505912  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||| ||||||||  |||| || ||||||| ||||||||||||| | || |||||||| ||||||||    
T  22505913 ctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcatt 22505982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 14884191 - 14884058
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    ||||||||||||| ||||||||||| |||||| | |||||  |   ||| || |||||||||||||||||||| ||||||||  |||| || ||||||||    
T  14884191 tgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagc 14884092  T
Q  262 aggagcatctctcttattcggcctcctctcatca 295  Q
     |||||||||||| | || |||||||| ||||||    
T  14884091 tggagcatctctcctcttgggcctcctatcatca 14884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 23078239 - 23077970
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||| |||||| ||||| ||||| |||||    ||| ||||||||||||| || ||||  | |||||| ||||| ||||| || || || |||    
T  23078239 agtctgcgtactagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtag 23078140  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| || ||||| |||||||||||||| ||| |||||||  |   |||| | || || |||||||    
T  23078139 caaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggc 23078040  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || |||||||| ||||| || ||||||||||||||||||||| | || |||||||| ||||||||    
T  23078039 ctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcatt 23077970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 23563495 - 23563237
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||| ||||||||||| || || ||||||   ||||||||||||||||| || ||||| | ||| || ||||| || ||||| || ||||| ||  ||     
T  23563495 gtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttataacaaacat 23563396  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || | ||| || || |||||  |||| || ||||| ||||||||||| ||||||||||||||  |   ||| || ||||||||||||||||| ||    
T  23563395 tgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttc 23563296  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcat 293  Q
     |||||||| || || || || |||| ||||||||||||| | || |||||||||||||    
T  23563295 accacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 21870432 - 21870343
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||| |||||||||||| ||||||| |||||||| || || | |||||||| ||||||||||||| | || ||||||||| |||||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcatt 21870343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 21874712 - 21874623
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||| |||||||||||| ||||||| |||||||| || || | |||||||| ||||||||||||| | || ||||||||| |||||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcatt 21874623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||||||||| || ||||| || ||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 23526293 - 23526345
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  23526293 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 16258189 - 16258103
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 21883017 - 21883075
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctctt 276  Q
    ||||||||||||||||||||||| |||||||| || |||||||||| | ||||| ||||    
T  21883017 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagaaacatctttctt 21883075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 22591908 - 22591822
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 22595463 - 22595377
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || |||||||||||| |||||||| | || || ||||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 21983324 - 21983229
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
    |||||||||||||| ||||| |||||| || | || || |||||||||||| |||||||  | || || |||||||||||||| | ||| ||||||    
T  21983324 ttactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttc 21983229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 20803785 - 20803891
Alignment:
Q  164 tgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcag 263  Q
    ||||||||||  ||||||| |||||| |||||| | ||||  |  ||||| || ||||||||||||||||| ||| | || ||||| || ||||| ||||    
T  20803785 tgacccttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataattgaaacagacaatctccgcag 20803884  T
Q  264 gagcatc 270  Q
    |||||||    
T  20803885 gagcatc 20803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 21561172 - 21561090
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||||||| ||||  |||||||| || || || |||||||||||| |||||||  | || || ||||||||||||||    
T  21561172 ttactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcatt 21561090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 20779083 - 20779147
Alignment:
Q  164 tgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcc 228  Q
    ||||||||||| || || |||||||| ||||||||||| | ||| ||| | ||||||||||||||    
T  20779083 tgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20779147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 20824487 - 20824567
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgacc 108  Q
    |||||| ||||||||||||||||| |||||||| |||   || |||||||| || || |||||||| | ||| ||||||||    
T  20824487 agtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgcgtgcactgcgaactaatgtgacc 20824567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 6412 - 6131
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||| | ||||||||||||||||||||||| |||| ||| ||||||||||||    
T  6412 agtctgtgtaccagtcaaagcaaatacctttccaccagttctaaccttcttctgttgtgtgcactgagtactgatgtggccctattcgttacaattatag 6313  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| ||| ||| || ||||| ||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6312 catacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggc 6213  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  6212 ctttctcgccacacttaaaacaaactatctcgacaggagcatctctcctattcggcctcctctcatcattcagtctttgctt 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 22054049 - 22054330
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||| |||||||| || |||||||| || || |||||     
T  22054049 agtctgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataa 22054148  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| |||||||||| ||||||||||| ||||  | |||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  22054149 catacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggc 22054248  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  22054249 ctttctcgccacacttaaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatcattaagtctctgctt 22054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 22027875 - 22027606
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||| ||||| ||||| |||||||||||   ||||||||||||||||||||||||||||| |||||| || |||||||||||  | ||||||    
T  22027875 agtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgtagttatag 22027776  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||| || || | ||| ||||| ||||   ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  22027775 caaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggc 22027676  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  22027675 ctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcatt 22027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 16268819 - 16268552
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| ||||||||||||  |||| ||||||||||||  |  ||||| | |||||| ||||||||| |||| ||||| |||    
T  16268819 agtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtag 16268720  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || |||||  | ||||||||||| ||||||||||| |||||| ||||||| ||   |||||| |||||||||||||    
T  16268719 cagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggc 16268620  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  |||| || ||||||| ||||||||||||||| || |||||||| ||||||    
T  16268619 ctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatca 16268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 19985445 - 19985633
Alignment:
Q  107 ccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttgg 206  Q
    |||||||||| ||||||||||||  ||||||| || | ||||||||| ||||   |||| |  ||||||||||| |||||| |||||||||||||   |     
T  19985445 ccctcttcatcacaattatagcaaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggt 19985544  T
Q  207 tacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
     ||| || ||||||||||||| ||| ||||||||||| ||||| || ||||||| ||||||||||||| | || |||||||||||||||    
T  19985545 cacatacattactcttgtggcttttttcgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatca 19985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 303
Target Start/End: Original strand, 22374131 - 22374330
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| ||||||||||||  ||| |||||| ||||||||||| ||||   |||| || |||| ||||||||| ||||||||||| |||||      
T  22374131 tgaccttcttcatcacaattatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcac 22374230  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
     |  ||| || |||||||||||| |||| || |||||||| ||||| || ||||||| ||||| ||||||| |  | ||||||||||| |||||||||||    
T  22374231 ggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtct 22374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 28984097 - 28984364
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    ||||||||||||||||| |||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  28984097 agtctgtgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 28984196  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  28984197 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 28984296  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  |||| || |||||| | |||||||||||| | || |||||||| ||||||    
T  28984297 ctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatca 28984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 21928693 - 21928892
Alignment:
Q  107 ccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttgg 206  Q
    |||||||||| ||||||||||||  | |||||||| |||||||||||  | |   |||| || ||||||||||| |||||||||||||||||||| | ||    
T  21928693 ccctcttcatcacaattatagcaaacgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcgg 21928791  T
Q  207 t-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctct 305  Q
    | ||  || ||||||| |||||| || ||||||||||| ||||| |  ||||||| ||||||||||||| |  | ||||||||||||||||| || ||||    
T  21928792 tcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctct 21928891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 309
Target Start/End: Complemental strand, 31414119 - 31413846
Alignment:
Q  36 taccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaac 135  Q
    |||||||||| ||||| ||||| |||||   |||| ||||||||| ||| || ||||| | |||||| ||||| ||||| || || || |||||  |||     
T  31414119 taccagtcaatgcaaacactttcccaccggttctagccttcttcgactgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaat 31414020  T
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
     || || ||||| || || |||||  |||| || ||||| |||||||| ||||||||| |||||||  |   |||| | || ||||| |||||||| ||     
T  31414019 gtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggcctttttca 31413920  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||| ||||| || || ||| |||||||||||||| | || ||||||||||||||||| | |||||||||    
T  31413919 ccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcattctctgctt 31413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 29301021 - 29300752
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||| ||||| | ||| ||||| ||||| |  ||| ||||||||||||| || ||||||| |||||| ||||| |||||||| || ||||||    
T  29301021 agtctgcgtacccgtcaatgaaaacactttcccaccgatcctagccttcttcggctgagtacactgagaactgatatgaccttcttcattgcagttatag 29300922  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
     |  |||  || || ||||| || || |||||  |||| ||  |||| |||||||| ||||||||| | |||||  |   |||| | || ||||||||||    
T  29300921 tagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccacaagcattgctcttgtggc 29300822  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    || | || |||||||||||||| || || ||||| ||| |||||| | | || |||||||| ||||||||    
T  29300821 ctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcatt 29300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 297
Target Start/End: Complemental strand, 6607024 - 6606795
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| |||||||| ||||| | |||||  || || ||||||| ||||||  ||||  ||| ||| || |||||||| || |||| | | || |    
T  6607024 ctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaatatccccacgcttgcattcagctatcgtatgcc 6606925  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    |||||| |||||| | ||| ||||||||||| ||     | ||||| |||||||||||||| ||||| ||||||||  | || || ||||||| |||| |    
T  6606924 ccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaac 6606825  T
Q  268 atctctcttattcggcctcctctcatcatt 297  Q
    ||||||  | || || ||||||||||||||    
T  6606824 atctcttctcttaggtctcctctcatcatt 6606795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 21163935 - 21163883
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||| ||||||||||||| |||||||| || |||||||||||||||||    
T  21163935 ctcttgtggtctttctcgccacaattaaaacagacaatctcagcaggagcatc 21163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 22523883 - 22523967
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaa 299  Q
    |||||| |||||||||||||||||||  || | ||||| |||||| ||||||||||| ||||  | |||| ||||||||||||||    
T  22523883 ttactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaa 22523967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 30310559 - 30310497
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||||||||| || ||||| || || || |||||||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatc 30310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 21391269 - 21391214
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||||||| |||||   |||||| || |||||||||||||||||    
T  21391269 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 21780595 - 21780540
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||||||| |||||   |||||| || |||||||||||||||||    
T  21780595 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 28989316 - 28989371
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggct 83  Q
    ||||||||||||||||| |||||| || |||||||||| ||||  |||||||||||    
T  28989316 agtctgtgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggct 28989371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 40207 - 40488
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| ||||| |||||   |||||||||||||||||||||||||||||||||||| || |||||||| || || |||||     
T  40207 agtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgcagttataa 40306  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| |||||||||  ||||||||||| |||| ||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||    
T  40307 catacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggc 40406  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  40407 ctttctcgccacacttataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgctt 40488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 9951 - 9661
Alignment:
Q  19 atcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcatta 118  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||| |||||||| || | |||||| ||     
T  9951 atcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctaaccttcttcggcagtgtgcactgtgtactgatatggcactcttcgttg 9852  T
Q  119 caattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttac 218  Q
    || ||||| ||| |||||||||| ||||||||||| ||||  | |||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||    
T  9851 cagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattac 9752  T
Q  219 tcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||   |||||||||||||||||||||||| ||||    
T  9751 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattaagtctcagctt 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 166; Significance: 8e-89; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 263375 - 263656
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||||| |  |||||||||||||| |||||||||||| |||||||| || |||||||| ||||| |||||     
T  263375 agtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataa 263474  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| ||||||||||   ||||||||| ||||  | |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  263475 catacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggc 263574  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||    
T  263575 ctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcagtctctgctt 263656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 40 - 309
Target Start/End: Complemental strand, 4992 - 4723
Alignment:
Q  40 agtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatca 139  Q
    |||||||||||| |||||||||||   |||||||||| |||||||||| |||||||||||||| || ||||| || || || ||||| ||| ||||||||    
T  4992 agtcaaagcaaacacttttccaccggttctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgcagttataacatacaacatca 4893  T
Q  140 ccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccac 239  Q
    || ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  4892 ccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccac 4793  T
Q  240 acttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||    
T  4792 acttataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctt 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 28 - 303
Target Start/End: Complemental strand, 17639 - 17364
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| | ||| ||||||  ||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| ||     
T  17639 agtctgcgtaccagtcaaagcaaacattttcccaccagttctaaccttcttcggctgtgtacactgagtactgatatggccctcttcgttgcaattgtaa 17540  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| |||||||||| ||| || |||| ||||   |||||||||| ||  ||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  17539 catacaacatcaccacgcatgtaatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggc 17440  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  17439 ctttctcgccacacttataacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtct 17364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 203530 - 203811
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||||| |  |||||||||||||| |||||||||||| |||||||| || |||||||| ||||| |||||     
T  203530 agtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataa 203629  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| ||||||||||   ||||||||| ||||  | |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  203630 catacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggc 203729  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||   ||||||||||||||||| |||||||||||    
T  203730 ctttctcgccacacttaaaacaaactatctcaccaggagcatctctcctaacgggcctcctctcatcattcagtctctgctt 203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 146; Significance: 7e-77; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 64757 - 64476
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||| ||||||||| ||||| | ||||  ||||||||||||||| ||||||||||| | ||| || || |||||||||| ||||||||||    
T  64757 agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag 64658  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  | |||||||| ||||||||||  |||||  |||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  64657 caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggc 64558  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||    
T  64557 ctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 64476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 49335 - 49054
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||| ||||||||| ||||| | ||||  ||||||||||||||| ||||||||||| | ||| || || |||||||||| ||||||||||    
T  49335 agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag 49236  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  | |||||||| ||||||||||  |||||  |||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  49235 caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggc 49136  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    | ||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||    
T  49135 ccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 49054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 58369 - 58088
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||| ||||||||| ||||| | ||||  ||||||||||||||| ||||||||||| | ||| || || |||||||||| ||||||||||    
T  58369 agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag 58270  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  | |||||||| ||||||||||  |||||  |||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  58269 caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggc 58170  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    | ||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||    
T  58169 ccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 58088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 29 - 297
Target Start/End: Original strand, 29774 - 30042
Alignment:
Q  29 gtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagc 128  Q
    ||||| ||||||||||||||||| || || |||||    |||||||||||||| || || ||||| | |||||| ||||| || ||||| ||| |||| |    
T  29774 gtctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcaaatataac 29873  T
Q  129 atccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcc 228  Q
    |  | |  || || | ||| ||||| |||||  |||| ||||| || ||||||||||| ||||||||||||||  |   |||||||||||||||||||||    
T  29874 aaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcc 29973  T
Q  229 tttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||| |||||||| || || ||||| |||| |||| |||||||| | || |||||||||||||||||    
T  29974 tttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatt 30042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 642 - 373
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||||||||||||||| ||||| ||||| ||| |   ||||||||||||||||||||||||||| | |||||| || ||||||||||| || ||||||    
T  642 agtctgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgcagttatag 543  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| ||||||||||| |||||  |||| || ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  542 caaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaacatcactcttgtggc 443  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||  |||||| ||  |||| || ||||||||||||||||||||| |||| |||||||||||||||||    
T  442 ctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcatt 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 306
Target Start/End: Original strand, 20970 - 21241
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||   ||||||||||||||| ||||| ||||| | ||||||  | ||||| ||||| || ||||||||    |    
T  20970 gtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgtacactgtgaactgatacggccctcctcattgcagttatagcaaatta 21069  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| |||||  |||   |||| |||||||||||||||||||| |||||||||||| | || |||||||| ||||||||||||||||||||    
T  21070 tgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctc 21169  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
     ||||||||  | || || |||||||||| |||||||||| | || ||||||||||||||||| || |||||    
T  21170 accacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctg 21241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 297
Target Start/End: Complemental strand, 98734 - 98469
Alignment:
Q  32 tgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatc 131  Q
    ||||||||||||| |||||| || || ||||||   |||||||||||||||||||||||||| | |||||| || |||||||| || || ||||| |||     
T  98734 tgtgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacata 98635  T
Q  132 caacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggccttt 231  Q
    |||||||||| ||||||||||| |||||  |||| || ||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  98634 caacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccttt 98535  T
Q  232 ctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||  |||| || |||||||||||||||||||||   || |||||||||||||||||    
T  98534 ctcgccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatt 98469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 306
Target Start/End: Original strand, 176212 - 176414
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| ||||||||||||  |||||||||| ||||||||||| ||||   |||| || |||| ||||||||| |||||||||||||||||      
T  176212 tgaccttcttcatcacaattatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcac 176311  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
     |  ||| || ||||||||||||||||| || |||||||| ||||| || ||||| | ||||||||||||| |  | ||||||||||||||||| |||||    
T  176312 ggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtct 176411  T
Q  304 ctg 306  Q
    |||    
T  176412 ctg 176414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 28 - 303
Target Start/End: Original strand, 22271 - 22546
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||| | ||| |   ||||||||||||||||||||||||||||| |||||| || ||||||||||| || ||||||    
T  22271 agtctgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttatag 22370  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| |||||||||||  ||||  |||| || ||||| |||||| |||| || |||||||||||||| ||| |||| |||||||||||||    
T  22371 caaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggc 22470  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
    ||||||||||||||||  |||| || |||||| |||||||||||||| |||| ||||||||||||||||| |||||    
T  22471 ctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtct 22546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 53578 - 53297
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||||| |||||| || | |||||| || |||||||||||||| |||||     
T  53578 agtctgcgtaccagtcaatgcaaatactttcccaccggttctaaccttcttcggctatgtgcattgtgaactgatatggccctcttcattacagttataa 53479  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||| | || ||||| |||||||||||  |||| ||||| || || || ||||||||||| || |||||||||||||| |||||||| |||||||||||||    
T  53478 cataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggc 53379  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||||||||||  |||| || ||| ||||| ||||||||||| |||| ||||||||||||||||| | |||||||||    
T  53378 ctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattcaatctctgctt 53297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 309
Target Start/End: Complemental strand, 8625 - 8336
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||| ||  ||||||| | |||||| || |||| |||||| |    
T  8625 tcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgc 8526  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||| ||||| ||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  8525 agttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattact 8426  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||| ||||||||||||||| |||| || || ||| || ||||||||||| | || || |||||||||||||| || ||||||||    
T  8425 cttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctt 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 309
Target Start/End: Complemental strand, 18839 - 18550
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| ||||| |||||   ||||||||||||||| ||  ||||||| | |||||| || |||| |||||| |    
T  18839 tcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgc 18740  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||| ||||| ||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  18739 agttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattact 18640  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||| ||||||||||||||| |||| || || ||| || ||||||||||| | || || |||||||||||||| || ||||||||    
T  18639 cttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctt 18550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 266
Target Start/End: Original strand, 115751 - 115949
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    |||||||||||||| || |||||||||| |||||| ||||||||  |||| |||||||||||| | | |||||| ||||||||||| |||| || |||||    
T  115751 ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgac 115850  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggag 266  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||    
T  115851 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 115949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 269
Target Start/End: Complemental strand, 94049 - 93808
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||| |||   || |||||||| || || |||||||| | ||| ||||||||||| |||  ||| ||| |     
T  94049 agtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaa 93950  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || ||||||||||| || | ||  ||||| ||||| || || |||||||| ||||||||||| |  || ||| | |||||||||||||    
T  93949 caaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 93850  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    | ||| | ||||| ||  |||| || | |||| |||||||||    
T  93849 ccttcacaccacatttgtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 8553 - 8602
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||| ||||    
T  8553 ctcttgtggcctttctcgccacaattaaaacagataatctcagcaagagc 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 1246 - 1104
Alignment:
Q  167 cccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggag 266  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  267 catctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || |  ||||| |||||||||||||||||||||||||||||||    
T  1146 cacccttcttactcggcctcctctcatcattaagtctctgctt 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 21567288 - 21567014
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| |||||||||||   ||||| |||||| ||||| |||||||| | ||||||||| ||||| | || |||||||||     
T  21567288 agtctgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctccttatcacaattataa 21567189  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||||||||| | |||||| |  || |   |||| || ||||| ||||||||||| |||||||||||||| || |||||||| ||||| |||||||    
T  21567188 caaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggc 21567089  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtc 302  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||| ||||||||||| ||||    
T  21567088 ctttctcgccacacttaaagcaaactatttcagcaggagcatctctcctcttgggccttctctcatcattcagtc 21567014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 19437993 - 19438255
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| || || |||| |   |||||||||||||||||||||||||| | |||||| || | |||||| || || ||||| ||| |||    
T  19437993 gtaccagtcagagcaaacaccttaccactagtcctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacatacaa 19438092  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| ||||||||||| |||||  |||| || ||||| ||||||||||||||||| |||||||| || |||||||| ||||||  ||||||||||||    
T  19438093 catcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctc 19438192  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||  |||  || ||||||||||||||||||||| | || |||||||||||||||||    
T  19438193 accacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatt 19438255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 14377221 - 14376944
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| |||||||||||   ||||||||||||||||||||| || || | ||||||||| ||||||||||| |    
T  14377221 tcactagtagtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgc 14377122  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||||||||| ||||| ||||  ||||   |||| || ||||| ||||||||||| |||||||||||||| || |||||||| |||||    
T  14377121 agttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattact 14377022  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||||| || |||||  | || || |  ||| |||||||||||||| |||| || ||||||||||||||    
T  14377021 cttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcatt 14376944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 297
Target Start/End: Original strand, 18797666 - 18797943
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||| ||||||||||| ||||| ||||| |||||   |||||||||||| || || |||||||| | |||||| || || || ||||| |    
T  18797666 tcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgc 18797765  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||||||  |||| ||||| ||||||||||| |||||  |||| |||||||| |||||||||||||| |||| |||||| || || ||||| |||||    
T  18797766 agttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattact 18797865  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||||||||||||||| |||| || || ||  |||||||||| ||| | || |||||||||||||||||    
T  18797866 cttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcatt 18797943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 34642876 - 34642645
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||| ||| ||||| ||||| |||||    |||||||||||||| || |||||||||| |||||| ||||||||  |||| || || |||||| |||    
T  34642876 gtaccagccaaggcaaacactttcccaccggtcctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcagttgtagcatacaa 34642777  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
     |||||| || || ||||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  34642776 tatcaccacgtttacaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctc 34642677  T
Q  235 gccacacttaaaacacactatctcagcaggag 266  Q
    |||||||||||| || |||||||| |||||||    
T  34642676 gccacacttaaagcaaactatctccgcaggag 34642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 306
Target Start/End: Complemental strand, 24515671 - 24515433
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    |||||| || |||| || || ||||| | |||||||||||| || ||||| || ||||| ||  ||||||| || | ||| ||||| |||||  |||| |    
T  24515671 ctaaccgtcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtc 24515572  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
      ||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| |||| || || ||| |||||||    
T  24515571 ttttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagc 24515472  T
Q  268 atctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||||| | || ||||||||||||||||| || |||||    
T  24515471 atctctcctcttgggcctcctctcatcattcagcctctg 24515433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 21474643 - 21474853
Alignment:
Q  87 tgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaa 186  Q
    ||||||||| ||| || ||||||||||||| |||||| |||||  ||| |||||| |||||||| || || |   |||| || ||||  ||||| | |||    
T  21474643 tgcactgagaactaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaa 21474742  T
Q  187 acacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctc 286  Q
    |||||||||||||||   |  ||| || ||||||||||||||||| || |||||||| ||||| || ||||||| ||||||||||||| |  | ||||||    
T  21474743 acacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctc 21474842  T
Q  287 ctctcatcatt 297  Q
    |||||||||||    
T  21474843 ctctcatcatt 21474853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 297
Target Start/End: Complemental strand, 10466102 - 10465876
Alignment:
Q  71 accttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccct 170  Q
    |||||||||||||| || ||||| | ||| || ||||| |||||||| || ||||||||  |||  || || ||||| || || |||||  |||| ||||    
T  10466102 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 10466003  T
Q  171 tctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||| |||||||| ||||| ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || |||||||||||| ||||    
T  10466002 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 10465903  T
Q  271 tctcttattcggcctcctctcatcatt 297  Q
    |||| | || |||||||| ||||||||    
T  10465902 tctcctcttgggcctcctatcatcatt 10465876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 24367384 - 24367651
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||  ||||   |||||||| |  | |||||| | ||| || ||||| ||| |||| ||||| ||     
T  24367384 agtctgcgtaccagtcaaagcaaacaccttcccaccagttctagttttcttcggttcagggcactgtgaactaatatgaccttctccattgcaattgtaa 24367483  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  24367484 cagacaatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 24367583  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| || ||||||||||| | || |||||||| ||||||    
T  24367584 ctttctcaccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatca 24367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 15462320 - 15462544
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| |||||||| |||  ||| |||||||| || || |||||||| | ||| ||||| ||||| |||  ||| |||||     
T  15462320 agtctgcgtaccagtcaaggcaaatacttttcctccagttctgaccttcttaggttgcgtgcactgcgaactaatgtggccctcctcaccacagttataa 15462419  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  | | ||| || |||||||| || || | ||  ||||| ||||| || || |||||||| |||||||||||  |||| || || |||||||||||||    
T  15462420 cacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggc 15462519  T
Q  228 ctttctcgccacacttaaaacacac 252  Q
    ||||| | ||||||||  |||||||    
T  15462520 ctttcgcaccacacttgtaacacac 15462544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 25771019 - 25771106
Alignment:
Q  219 tcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||||||||||| || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| || |||||    
T  25771019 tcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 25771106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 297
Target Start/End: Original strand, 19456158 - 19456276
Alignment:
Q  179 cacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttat 278  Q
    |||||||| ||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || || || ||||||| ||||| ||||||| | |    
T  19456158 cacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctct 19456257  T
Q  279 tcggcctcctctcatcatt 297  Q
    | |||||||||||||||||    
T  19456258 tgggcctcctctcatcatt 19456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 297
Target Start/End: Original strand, 19466303 - 19466421
Alignment:
Q  179 cacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttat 278  Q
    |||||||| ||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || || || ||||||| ||||| ||||||| | |    
T  19466303 cacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctct 19466402  T
Q  279 tcggcctcctctcatcatt 297  Q
    | |||||||||||||||||    
T  19466403 tgggcctcctctcatcatt 19466421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 16813805 - 16813902
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||| |||||||||||||||||||| ||||||||  | || || |||||||||||| |||||||| | || || |||||||||||||| | ||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 8720821 - 8720733
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||| |||||||||||||||||||| ||||||||  | || || |||||| ||||| |||||||| | || |||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcatt 8720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 23081594 - 23081688
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||||||||||||| |||||  || |||| || |||||| ||||||||||| ||||  | |||| |||||||||||||| ||| |||||    
T  23081594 ttactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgctt 23081688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 27559132 - 27559045
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaaca 249  Q
    ||||||||||||  ||||||| ||||||||||||| | ||||  | ||||||  ||||||||||||||||||| ||||| || |||||    
T  27559132 tgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaaca 27559045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 21764976 - 21765038
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 21765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 24292894 - 24292844
Alignment:
Q  213 cgttactcttgtggcctttctcgccacacttaaaacacactatctcagcag 263  Q
    |||| ||||||||||||||||||||||| || |||||||| ||||| ||||    
T  24292894 cgttgctcttgtggcctttctcgccacaattgaaacacacaatctctgcag 24292844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 25756720 - 25756670
Alignment:
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  25756720 cttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 25756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 19486410 - 19486309
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgct 308  Q
    ||||| |||||||||||||| ||||| ||||||||  | || || ||||||| |||| |||||||  | || || |||||||||||||| | ||| ||||    
T  19486410 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 19486311  T
Q  309 tc 310  Q
    ||    
T  19486310 tc 19486309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 20010684 - 20010599
Alignment:
Q  143 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcc 228  Q
    |||||||| || || | ||| ||||||||||| || || |||||||| ||||||||||| | ||| ||| | ||||||||||||||    
T  20010684 cgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 30678141 - 30678052
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||| |||||||||||||  ||||| ||||||||  | || || | ||||||||||| |||| ||||  | |||||||||||||||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcatt 30678052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 22437043 - 22437095
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  22437043 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 22437095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 35 - 310
Target Start/End: Original strand, 54203 - 54478
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||| |||||||| ||||| ||||     |||||||| ||||| ||||||||| | |  ||||| |||||||||||||| || ||||| ||  |||    
T  54203 gtaccagtgaaagcaaacactttaccactggtcctaacctttttcggttgtgtgcaccgtgagctgatatgaccctcttcattgcagttataacaaacaa 54302  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| ||||||||||  |||||  |||| |||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  54303 catcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctc 54402  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
    |||||||||  |||| || ||||||||| |||||| ||   |||| ||||||||||||||||| |  |||||||||    
T  54403 gccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgcttc 54478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 164564 - 164287
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| |||||  ||||| ||||| ||||| ||||| |||||   |||||||||||||||||| ||  | || | |||||| || || |||||||| |    
T  164564 tcactagtagtctacgtaccggtcaatgcaaacactttcccaccggttctaaccttcttcggctgagtataatgcgaactgatatggccttcttcattgc 164465  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | ||||| ||  |||||| ||| |||||||||||  |||   |||| || ||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  164464 agttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaacattact 164365  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||||||||||||||  |||| || |||||||||||||| |||||| |||| |||||||||||||||||    
T  164364 cttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcatt 164287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 30539 - 30487
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  30539 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 297
Target Start/End: Original strand, 15279 - 15490
Alignment:
Q  86 gtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctga 185  Q
    |||||||| | |||||| || ||||||||||| || ||||| ||  |||||||||| ||||||||||| |||||  |||| |  ||||| ||||||||||    
T  15279 gtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctga 15378  T
Q  186 aacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcct 285  Q
    | ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| | || |  ||||||||||||||||||||| |||| |||||    
T  15379 agcacttcttctcgtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcct 15478  T
Q  286 cctctcatcatt 297  Q
    ||||||||||||    
T  15479 cctctcatcatt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 24 - 302
Target Start/End: Complemental strand, 2007 - 1729
Alignment:
Q  24 tagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatt 123  Q
    |||||||||| |||| |||||||||||| ||||| |||||   ||||| |||||| ||||| |||||||| | ||||||||| ||||| |||| ||||||    
T  2007 tagcagtctgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctcctcatcacaatt 1908  T
Q  124 atagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttg 223  Q
    ||| ||  |||||||||| | |||||| |  || |   |||| || ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||    
T  1907 ataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttg 1808  T
Q  224 tggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtc 302  Q
    ||||||||||||||||||||| | || | ||| ||||||| |||||||||| | || ||||| ||||||||||| ||||    
T  1807 tggcctttctcgccacacttatagcaaattatttcagcagtagcatctctcctcttgggccttctctcatcattcagtc 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 107 - 297
Target Start/End: Original strand, 7266 - 7456
Alignment:
Q  107 ccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttgg 206  Q
    |||||||||| | | ||||| ||  |||||||||| ||||||||||| |||||  |||| || ||||| ||||||||||| |||||||||||||| || |    
T  7266 ccctcttcatcatagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttag 7365  T
Q  207 tacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||| |||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||| |||| |||||||||||||||||    
T  7366 tacaaacattactcttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcatt 7456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 310
Target Start/End: Original strand, 8755 - 9045
Alignment:
Q  20 tcactagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac 119  Q
    ||||||| ||| || ||||||||||| ||||| ||||| |||||    |||||||||||||| || |||||||| | |||||| || || ||||| || |    
T  8755 tcactagtagtatgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgc 8854  T
Q  120 aattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttact 219  Q
    | || |||||  |||  ||||| ||||||||||| |||||  |||| || ||||| |||||||||||||||||||||||||| || |||||||| |||||    
T  8855 agttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattact 8954  T
Q  220 cttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
    ||||||||| ||||||||||||||| |||| || |||||| |||||||||||||| | || || || ||||||||||| ||  ||||||||    
T  8955 cttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagcttctgcttc 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 273
Target Start/End: Complemental strand, 1001 - 764
Alignment:
Q  36 taccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaac 135  Q
    |||||||||||||||| ||||| |||||   |||||||||| |||| || || ||||| | |||||| |||||||||||||| || ||||| ||  |||     
T  1001 taccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaacaat 902  T
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
    |||||| ||||||||||| |||||  |||| || ||||| ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||||| |    
T  901 atcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggcctttcttg 802  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctct 273  Q
    ||||||||  |||| || ||||||||||||||||||||    
T  801 ccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 11952 - 11780
Alignment:
Q  137 tcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgc 236  Q
    ||||| ||||||||||| |||||  |||| || ||||| ||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||    
T  11952 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgc 11853  T
Q  237 cacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||  |||| || ||||||| ||||||||||||| | || |||||||||||||||||||||||||||||    
T  11852 cacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 306
Target Start/End: Complemental strand, 2100 - 1829
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || ||||||||  |||    
T  2100 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaa 2001  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    | || || ||||| ||||| ||||   |||| || ||||| ||||||||||| |||||||||||||| ||   |||||| ||||||||||||||||||||    
T  2000 cgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctc 1901  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
     ||||||||  | || || || ||||||||||||||| || | || ||||||||||||||||| || |||||    
T  1900 accacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctg 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 274
Target Start/End: Original strand, 70521 - 70767
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||||||||||| |||| |||||||| |||  ||| |||||||| || || |||||||| | ||| ||||| ||||| |||||||| |||||     
T  70521 agtctgcgtaccagtcaaaacaaatacttttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcctcattacagttataa 70620  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || || | ||  ||||| || || || || |||||||||||||||||||| ||||| || || |||| ||||||||    
T  70621 caaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctcatctttggtgcagacattacccttgtggc 70720  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctc 274  Q
    ||||| | ||||||||  |||| || |  ||| ||||||||||||||    
T  70721 ctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctc 70767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 700 - 431
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| |||||   ||||| |||||| ||||| |||||||| | ||||||||| ||||| |||| |||||||||     
T  700 agtctgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataa 601  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||||||||   | |||||| |  || |   |||| || ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||||||    
T  600 caaacaacatcattcctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggc 501  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||| | || || || |||||||||||    
T  500 ctttctcgccacacttaaagcaaactatctcagtaggagcatctctcctcttgggtcttctctcatcatt 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 325863 - 326136
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| ||||| |||||   |||||||||||| || ||||||||||| | |||||| || ||||||||||| || ||||| ||  |||    
T  325863 gtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaacaa 325962  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||| ||||  ||||   |||| || ||||| |||||| |||| |||||||||||||| ||   ||| || |||||||||||| |||||||    
T  325963 catctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtctttctc 326062  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||  | || || ||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||    
T  326063 gccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattcagcctctgctt 326136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 319534 - 319673
Alignment:
Q  170 ttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    ||||| ||||||||||| |||||||||||||| ||   ||| || |||||||||||||||||||||||||||||  | || || ||| ||||||||||||    
T  319534 ttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcat 319633  T
Q  270 ctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||| |||| ||||||||||||||||| || ||||||||    
T  319634 ctctcctattgggcctcctctcatcattcagcctctgctt 319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 20833117 - 20832843
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| | |||    ||||||||| |||| || || ||||| | |||||||||||| || ||||| || ||||| ||  |||    
T  20833117 gtaccagtcagagcaaacactttactaccggtcctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaacaa 20833018  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || | ||||||||| |||||  |||| || ||||| |||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  20833017 catctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctc 20832918  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||||  | || || || ||| |||||||||||||| | || || |||||||||||||| || ||||||||    
T  20832917 gccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctt 20832843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 297
Target Start/End: Original strand, 21961193 - 21961462
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||  |||||||||||||||||  | |||||| | |||||| ||||||||| |||| || || |||    
T  21961193 agtctgcgtaccagtcaaagcaaatacctttccaccagttctaaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtag 21961292  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || ||||| || || ||||   |||| |||||||| ||||||||||| |||||| ||||||| ||   |||||| || ||||||||||    
T  21961293 cagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggc 21961392  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || ||||||||  |||| || ||||||| ||||||||||||| | || || ||||| ||||||||    
T  21961393 ctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcatt 21961462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 24096839 - 24096570
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| |||||   |||| ||||||||||||| || ||||| | |||||| ||||| ||||| || || || |||    
T  24096839 agtctgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgtag 24096740  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| || ||||| |||||||| ||||||||| |||||||  |   |||| | |||||||||||||    
T  24096739 caaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggc 24096640  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || |||||||| ||||| || |||||| |||||||||||||| | || |||||||||||||||||    
T  24096639 ctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcatt 24096570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 21742769 - 21742495
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| || || |||||    ||||||||||| ||||| || ||||| | ||| || || || || |||||||| || |||||  |||    
T  21742769 gtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaa 21742670  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
    |||| || ||||||||||| || |   |||| || ||||| |||||||| || |||||||||||||| | ||| ||| || |||||||||||||||||||    
T  21742669 catccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcggtcacatacattactcttgtggcctttct 21742571  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    | |||||||| || || |  ||||||| ||||||||||||| | || ||||||||||||||||| |||||||||||    
T  21742570 caccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgctt 21742495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 20074933 - 20074666
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| |  || || |||  |||||||||||||||||  |  ||||| | | |||| ||||||||| |||| || || |||    
T  20074933 agtctgcgtaccagtcaatgcaaacatcttgcccccagttctaaccttcttcggctcaggacactgcgaattgatatgaccctctccattgcagttgtag 20074834  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||| ||| || |||||||| || || |   ||||||||||||| ||||||||||| |||||| ||||||| ||  ||||||| || ||||||||||    
T  20074833 cagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggc 20074734  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  ||||||| |||||||  |||||||||||| | ||  ||||||| ||||||    
T  20074733 ctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatca 20074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 297
Target Start/End: Original strand, 52988907 - 52989176
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || || || |||  ||||||||||||||| |  |  || || | |||||| ||||||||| |||| || || |||    
T  52988907 agtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacattgtgaactgatatgaccctctccattgcagttgtag 52989006  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || ||||   ||||||||||||| |||||||||||||||||| ||||||| ||   |||||| || ||||||||||    
T  52989007 cagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggc 52989106  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || ||||||||  |||| || ||||||| ||||||||||||| | || |||||||| ||||||||    
T  52989107 ctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcatt 52989176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 295
Target Start/End: Original strand, 20297664 - 20297816
Alignment:
Q  143 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacact 242  Q
    |||||||| || |||||  ||||||||||||  ||||||||||| |||||| ||||||| ||   |||||| ||||||||||||| |||||| |||||||    
T  20297664 cgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccacact 20297763  T
Q  243 taaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    |  |||| || ||||||||||||||||||||| | || |||||||| ||||||    
T  20297764 tgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 38910050 - 38909783
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| |||||||| |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  38910050 agtctgcgtaccagtcaaggcaaaaacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 38909951  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  38909950 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 38909851  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  38909850 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 48426039 - 48426306
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || |||||||||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  48426039 agtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 48426138  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  48426139 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 48426238  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  48426239 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 309
Target Start/End: Complemental strand, 21739220 - 21738979
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| ||||  || ||||| | |||||| ||||| ||||||||| | || |||||   |||||| || ||||| |||||  |||   |||| |    
T  21739220 ctaaccttcttaggctccgtacactgcgaactgatatgaccttcttcattatagttgtagcaaaaaacatccccacgcttacaatcaactaaggtgtgtc 21739121  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggag 266  Q
    | ||||| |||||||| || |||||||||||||| | | | |||||| |||||||||||||||||||| |||||||| || || |  ||||||| |||||    
T  21739120 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggag 21739022  T
Q  267 catctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || ||||| | || ||||||||||||||||| | |||||||||    
T  21739021 cacctctcctcttaggcctcctctcatcattcaatctctgctt 21738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 37680215 - 37680482
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || || ||||||| ||||  |||| ||||||  |  ||||| | ||| || ||||| ||| |||| ||||| ||     
T  37680215 agtctgcgtaccagtcaaagcaaacaccttcccaccaattctagtcttcctcggctcaggacactgtgaactaatatgaccttctccattgcaattgtaa 37680314  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  37680315 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 37680414  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||| ||||||| | || |||||||| ||||||    
T  37680415 ctttctcaccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatca 37680482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 22015962 - 22015700
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || |||||    ||||||||||||||||| || |||||   ||| || ||| | || || || || ||||| ||  |||    
T  22015962 gtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttataacaaacaa 22015863  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||||||||| ||||   |||| || ||||| ||||||||||| ||||||||||||||  |   |||||| ||||| || |||||||| ||    
T  22015862 catccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggcctttttc 22015763  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     |||||||| || || || || |  | ||||||||||||||| || |||||||||||||||||    
T  22015762 tccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatt 22015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 31537087 - 31536952
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    ||||||||||||| ||||||||||| || ||  | |||||  |   |||||| || ||||||||||||||||| ||||||||| |||| || |||||||     
T  31537087 tgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcaga 31536988  T
Q  262 aggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||| | || || ||||| ||||||||    
T  31536987 aggagcatctctcctcttgggtctcctatcatcatt 31536952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 297
Target Start/End: Original strand, 19857555 - 19857709
Alignment:
Q  143 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacact 242  Q
    ||||| ||||| |||||  |||| || ||||| ||||||||||| || |||||||||||  |   ||| || ||||||||||||||||| || |||||||    
T  19857555 cgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacact 19857654  T
Q  243 taaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | || || || ||||| | || |||||||||| | || |||||||||||||||||    
T  19857655 tgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcatt 19857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 21228600 - 21228538
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||||||||| || ||||| || ||||| |||||||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 21228538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 16379407 - 16379507
Alignment:
Q  206 gtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctct 305  Q
    |||||||| ||||| |||||||||||||| |||||   | | || || |||||||||  | ||||| ||||  ||||||||||||||||||||| |||||    
T  16379407 gtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcattaactctct 16379506  T
Q  306 g 306  Q
    |    
T  16379507 g 16379507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 18273114 - 18273202
Alignment:
Q  209 caaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||| |||||||||||||| ||||| ||||||||  |||| || ||||||| |||| |||||||  | || || ||||||||||||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcatt 18273202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 20853869 - 20853784
Alignment:
Q  143 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcc 228  Q
    |||||||| || || | ||| ||||||||||| || || |||||||| ||||||||||| | ||| ||| | ||||||||||||||    
T  20853869 cgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20853784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 270
Target Start/End: Complemental strand, 65453 - 65211
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||| | |||||||||||    ||||||||||| ||||| |||||||| | ||||||||| || || |||| |||||||||     
T  65453 agtctgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcacaattataa 65354  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  ||||||| || | ||| ||||  || | | |||| || ||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||    
T  65353 caaacaacatctcctctcttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggc 65254  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||  |||| || | |||||||||||||||    
T  65253 ctttctcgccacacttgtaacaaacaacctcagcaggagcatc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 62920 - 62646
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| ||||| |||||    ||||| ||||| ||||| || ||||| | |||||| ||||| | ||||||||| || ||| |  |||    
T  62920 gtaccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatatgaccttattcattacagttgtagaaaacaa 62821  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||| ||||| ||||   ||||  | ||||| |||||||| || |||||||||||||| | |  ||| || ||||||||||||||||||||    
T  62820 catccccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctc 62721  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
     |||||||| ||  | || || |||| ||||||||||||| | || ||||||||||||||||| | |||||||||    
T  62720 accacacttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctctgctt 62646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 39481 - 39207
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||  ||||| ||||| | ||||||  |||| || ||||| || ||||||||  |||    
T  39481 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcgattgtgtacactgcgaactgatacgaccttcctcattgcagttatagcaaacaa 39382  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||| ||||  ||||   |||| || ||||| ||||||||||| |||||||||||||| ||   |||||| ||||||||||||||||||||    
T  39381 catctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctc 39282  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
     ||||||||  | || || ||||||||||||||||||||| | || ||||||||||||||||| || ||||||||    
T  39281 accacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgctt 39207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 14753 - 14815
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||| |||||||||||||| ||||| || ||||| |||||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatc 14815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 269
Target Start/End: Complemental strand, 180951 - 180753
Alignment:
Q  71 accttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccct 170  Q
    |||||||| || || |||||||| | ||| ||||||||||| |||  ||| ||| | ||  ||| ||| || ||||||||||| || | ||  |||||||    
T  180951 accttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgaccct 180852  T
Q  171 tctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    |||| || || |||||||| ||||||||||| |  || ||| | |||||||||||||| ||| | ||||| ||  |||| || | |||| |||||||||    
T  180851 tctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 5596 - 5870
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| ||||| |||||    ||||||||||| || || || ||||| | |||||| ||||| |||||||||||||| |||||  |||    
T  5596 gtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcttcattacaattgtagcaaacaa 5695  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
    |||| || ||||| ||||| ||||   |||| || ||||| |||||||| || |||||||||||||| | | | ||| ||||||||||||||||||||||    
T  5696 catccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacgttactcttgtggcctttct 5794  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    | |||||||| || || | |||||||| ||||||||||||| | ||  |||||||||||||||| | |||||||||    
T  5795 caccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgctt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 11764 - 11683
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 243  Q
    ||||||||||||| ||||||||||| |||||| | |||||  |   ||| || |||||||||||||||||||  ||||||||    
T  11764 tgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttcttaccacactt 11683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 37095 - 37369
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||| ||||||| ||| || || ||||||   ||||||||||||||||| || ||||| | |||||| ||||| || ||||| || ||||||||  |||    
T  37095 gtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaacaa 37194  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
     ||| || | ||| ||||| |||||  |||| |||||||| ||||||||||| |||||||||||||| ||   |||||| ||||||||||||||||||||    
T  37195 tatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctc 37294  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    ||||||||| || || |  || |||| |||||  |||||| | || ||||||||||||||||| | |||||||||    
T  37295 gccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaatctctgctt 37369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 5337 - 5610
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| |||||||| || |||||    |||  |||||| ||||| || ||||| | |||||| ||||| ||||||||||| || |||||  |||    
T  5337 gtaccagtcaacgcaaaaaccttgccacctgacctagacttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaa 5436  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
    |||| || ||||| ||||| ||||   |||| || ||||| ||||||||||| ||||||||||||| || ||| |||||| ||||||||||||||||| |    
T  5437 catccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcat-ctcggtcacaaacattactcttgtggccttttt 5535  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    | |||||||| ||||| || || |||| ||||||||||||| | || ||||||||||||||||| | |||||||||    
T  5536 caccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattcaatctctgctt 5610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 274
Target Start/End: Complemental strand, 5357 - 5118
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||   ||||||||||||||| | ||| ||||  | |||||| || ||||| ||||| || ||||||||  |||    
T  5357 gtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttatgtacactatgaactgatatggccctcctcattgcagttatagcaaacaa 5258  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| |  ||||| ||||| ||||   |||| |||||||| ||||||||||| |||||||||||||||||   ||| || ||||||||||||||||| ||    
T  5257 catctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttc 5158  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctc 274  Q
    |||||||||  | || || |||||||||||||||||||||    
T  5157 gccacacttgtagcaaacaatctcagcaggagcatctctc 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 2787 - 3049
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||   ||||||||||||||| ||||  ||||| | |||||| || ||||| ||||| || ||||||||  | |    
T  2787 gtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaacta 2886  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| ||||| ||||   |||| ||||||||||||||||||||  ||||||||||||| ||   |||||| |||||||||||||||||||     
T  2887 tgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttctt 2986  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||  | || || |||||| |||||||||||||| | || |||||||||||||||||    
T  2987 accacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcatt 3049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 306
Target Start/End: Original strand, 70264 - 70535
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || |||||    ||||||||||| ||||| || ||||| | ||| || || || || |||||||| || |||||  |||    
T  70264 gtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaa 70363  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
     ||| || ||||||||||| || |   |||| || ||||||||||| |||||||||||||||||||| | ||| ||| || |||||||||||||||||||    
T  70364 tatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttct 70462  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    | ||||||||||| || |  ||||||| ||||||||||||| | || ||||||||||||||||| || |||||    
T  70463 caccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 70535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 9920 - 9658
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| || || ||||||   |||||||||||||| || || || || | ||| || || ||||| ||||| || ||||||||  |||    
T  9920 gtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttatagcaaacaa 9821  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||| |||||  ||||  |||| || ||||| ||||||||||| |||||||||||||||||   ||| || |||||||||||||| |||||    
T  9820 catctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttctc 9721  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||||||||  | || || || |||||||||||||||||| | || |||||||||||||||||    
T  9720 accacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcatt 9658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 309
Target Start/End: Original strand, 29752 - 29957
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||||||| |||||| |||||  |||||||||| |||||||| || ||||   |||| || |||   ||||||| |||||||||||||||||| |    
T  29752 tgaccttcttcatcacaattgtagcaaacaacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcatcat 29851  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtct 303  Q
     | ||||||| |||||||||||||| || || |||||||| ||| | |||||||||  ||||||||||||| |  | ||||||||||||||||| |||||    
T  29852 ggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcagtct 29951  T
Q  304 ctgctt 309  Q
    ||||||    
T  29952 ctgctt 29957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 50261 - 50523
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || |||||    ||||||||||| ||||| || ||||  | |||||| ||||| || ||||| || || |||||  |||    
T  50261 gtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgtagcaaacaa 50360  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
     ||| || ||||| ||||| ||||   |||| || ||||| |||||||||||||||||||||||||| | ||| |||||| |||||||||||| |||| |    
T  50361 tatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggtcttttt 50459  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | |||||||| ||||| || || |||| ||||||||||||| | || |||||||||||||||||    
T  50460 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 50523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 63667 - 63405
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || ||||     ||||||||||| ||||| || ||||| | |||||| ||||| || |||||| | || |||||  |||    
T  63667 gtaccagtcaaagcaaacaccttgccacttgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcctcattatagttgtagcaaacaa 63568  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
     ||| ||  |||| ||||| ||||   |||| || ||||| |||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||| |    
T  63567 tatccccatgcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggcctttat 63469  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | |||||||| ||||| || || |||| ||||||||||||| | || |||||||||||||||||    
T  63468 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 63405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 9169 - 8895
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| || || |||||    |||||||||||||  ||||| ||||| | | |||| ||||| || ||||| || ||||||||  |||    
T  9169 gtaccagtcagagcaaacacattaccaccggtcctaaccttcttcgtttgtgtacactgcgaattgatttgaccttcctcattgcagttatagcaaacaa 9070  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    |||| || ||||| ||||  ||||   |||| || ||||| ||||||||||| |||||||||||||||||   ||| || ||||||||||||| ||||||    
T  9069 catctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctc 8970  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
     ||||||||  | || || |||| ||||| |||||||||| | || ||||||||||||||||| || ||||||||    
T  8969 accacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgctt 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 1762 - 1495
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| || |||  ||||||||||||||| |  |  ||||| | |||||| ||||||||| |||| || || |||    
T  1762 agtctgcgtaccagtcaatgcaaacactttgcccccagttctaaccttcttcggttcgggacactgtgaactgatatgaccctctccattgcagttgtag 1663  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||   ||  || || |||||||| || ||||   |||| |||||||| ||||||||||| |||||| ||||||| ||   |||||| ||||||||||| |    
T  1662 cagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtc 1563  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  |||| || ||||||| ||||||||||||| | || |||||||| ||||||    
T  1562 ctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 306
Target Start/End: Complemental strand, 1426 - 1188
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| ||||| || ||||| | |||||| ||||| || ||||| ||| | |||||  ||| ||| || ||||| || || ||||   |||| |    
T  1426 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 1327  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    | ||||| ||||||||||| ||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||| | |||||||| ||||||    
T  1326 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 1227  T
Q  268 atctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||||| | || ||||||||||||||||| || |||||    
T  1226 atctctcctcttgggcctcctctcatcattcagcctctg 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 306
Target Start/End: Original strand, 7933 - 8171
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| ||||| || ||||| | |||||| ||||| || ||||| ||| | |||||  ||| ||| || ||||| || || ||||   |||| |    
T  7933 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 8032  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagc 267  Q
    | ||||| ||||||||||| ||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||| | |||||||| ||||||    
T  8033 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 8132  T
Q  268 atctctcttattcggcctcctctcatcattaagtctctg 306  Q
    ||||||| | || ||||||||||||||||| || |||||    
T  8133 atctctcctcttgggcctcctctcatcattcagcctctg 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 1031 - 769
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||| ||||||||||| || || ||||||   |||||||||||||| || || ||||| | |||||| ||||| || ||||| || |||||  |  |||    
T  1031 gtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttataataaacaa 932  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| ||||| |||||  |||  || ||||| ||||||||||| ||||||||||||||  |   |||||||||||||||||||||||| ||    
T  931 tgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttttc 832  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     |||||||| || || || ||||| | ||||||||||||| | || |||||||||||||||||    
T  831 accacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 306
Target Start/End: Complemental strand, 43567 - 43296
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || |||||    | ||||||||| ||||   ||||||| |  || || ||||||||||||| ||||||||||||  |||    
T  43567 gtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcactgcgagctaatatgaccctcttcatcacaattatagcaaacaa 43468  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttct 233  Q
    |||| || ||||| ||||| ||||   |||| || |||||||||||||| || ||||||||||||| || | | ||| || |||||||||||||| || |    
T  43467 catccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcat-ctcgatcacacacattactcttgtggccctttt 43369  T
Q  234 cgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctg 306  Q
    | | |||||| ||||| || ||||||  ||||||||||||| | || ||||||||||||||||| || |||||    
T  43368 cacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctg 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 5209 - 5471
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||| || || ||||| | |||||| ||||| || ||||| || ||||| ||  |||    
T  5209 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactgatatgaccttcctcattgcagttataacaaacaa 5308  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    | || || ||||| ||||  ||||   |||| || ||||  ||||||||||| |||||||||||||| ||   ||| || |||||| |||||||||||||    
T  5309 cgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctc 5408  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||| |||||  | || || ||||||||||||||||||||| |  | |||||||||||||||||    
T  5409 gccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcatt 5471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 34493 - 34755
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||| ||||| || ||||||||    ||||||||||||||||| || ||||  | ||| || ||||| || ||||| || ||||| ||  |||    
T  34493 gtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttataacaaacaa 34592  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    | || || ||||| |||||  |||   |||| || ||||  ||||||||||| ||||||||||||||  |   ||| || ||||||||||||||||||||    
T  34593 cgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttctc 34692  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     |||||||| ||||| || || |||| ||||||||||||| | || |||||||||||||||||    
T  34693 accacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatt 34755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 297
Target Start/End: Original strand, 42923 - 43116
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||| ||| |||||||||| |||||  ||||||| || |||||  |||| ||||   |||| || ||||| | |||||| || |||||||||||||| |    
T  42923 tgaccttctgcattacaattgtagcaaacaacatccccacgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagcacttcttctcatc-t 43021  T
Q  204 tggt-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
     ||| |||||| |||||||||||||||||||| | |||||| ||||| | |||||||| ||||||||||||| | || |||||||||||||||||    
T  43022 cggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagcatctctcctcttaggcctcctctcatcatt 43116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 801 - 934
Alignment:
Q  176 ccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctct 275  Q
    |||||||||||  ||||||||||||| ||   ||| || ||||||||||||||||||| |||||||||  | || || |||||||||||||||||||||     
T  801 ccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcc 900  T
Q  276 tattcggcctcctctcatcattaagtctctgctt 309  Q
    | || ||||||||||||||||| | |||||||||    
T  901 tcttaggcctcctctcatcattcaatctctgctt 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 1949 - 2147
Alignment:
Q  107 ccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttgg 206  Q
    |||||||||| ||||||||||||| ||||||| || ||||| ||||| ||||   | || || |||||||||||||| || |||||||||||||| | ||    
T  1949 ccctcttcatcacaattatagcatacaacatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatc-tcgg 2046  T
Q  207 t-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctct 305  Q
    | ||| || |||||||||||||||||||| |||||||| || || |  || |||| ||||||||||| | | || ||||||||||||||||| || ||||    
T  2047 tcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctct 2146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 309
Target Start/End: Complemental strand, 1025 - 746
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactga-----tgtgaccctcttcattacaattatagca 129  Q
    ||||||||||||||||| || || ||||||   |||||||||||||| ||||| ||||| | |||||     ||||||| || || || || ||||||||    
T  1025 gtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgtgtacactgcgaactgaactgatgtgaccttcctcgttgcagttatagca 926  T
Q  130 tccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcct 229  Q
      |||  ||||| ||||| ||||| |||||  |||| || ||||| |||||| |||| ||||||||||||||  |   ||| || |||||||||||||||    
T  925 aacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcct 826  T
Q  230 ttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    || || |||||||| || || || || ||   ||||||||||||| | || ||||||||||||||||| |||| ||||||    
T  825 ttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattcagtcgctgctt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 310
Target Start/End: Complemental strand, 963 - 688
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||| ||||||||||| || || ||||||   ||||||||||| ||||| || ||||| | |||||| || || || || || || ||||| ||  |||    
T  963 gtaccggtcaaagcaaacaccttaccaccagtcctaaccttctttggctgcgtacactgcgaactgatatgtccttcctcgttgcagttataacaaacaa 864  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| ||||| |||||  |||| |||||||| ||||||||||| ||||||||||||||  |   |||||| ||||||||||||||||| ||    
T  863 tgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttc 764  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
     |||||||| || ||  | || || | ||||||||||||| | || ||||||||||||||||| |  |||||||||    
T  763 accacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttc 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 41884 - 42151
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||||||||| || ||||| |||| ||||  |||||||||||  |  ||||| | |||||| ||||| ||  |||| || || ||     
T  41884 agtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgtaa 41983  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || |||||||| || ||||   ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||    
T  41984 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggc 42083  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||| ||||||||  | || || |||||| |||||||||||||| | || |||||||| ||||||    
T  42084 ctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 309
Target Start/End: Original strand, 16826 - 17067
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| | ||| || ||||| | ||| || || || || |||||||| || |||||  ||| ||| || ||||||||||| || |   |||| |    
T  16826 ctaaccttcttagtctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 16925  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggag 266  Q
    | ||||| |||||||| || |||||||||||||| | | | ||| || |||||||||||||||||||| |||||||| ||||| |  ||||||| |||||    
T  16926 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggag 17024  T
Q  267 catctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||| | || ||||||||||||||||| ||| |||||||    
T  17025 catctctcctcttaggcctcctctcatcattcagtttctgctt 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 4501 - 4339
Alignment:
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
    ||||||| ||||| ||||| ||||   |||| || ||||| ||||||||||| || |||||||||||  |   |||||| |||||||| |||||||||||    
T  4501 catcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctc 4402  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||| || || || || |||| ||||||||||||| | || |||||||||||||||||    
T  4401 gccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 17087 - 16979
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    ||||||||||||  ||||||| |||||| |||||| | ||||  | ||||||  | ||||||||||||||||| ||||| || |||||    ||||||||    
T  17087 tgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaagtaatctcagc 16988  T
Q  262 aggagcatc 270  Q
    |||| ||||    
T  16987 aggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 5824 - 6020
Alignment:
Q  101 atgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcat 200  Q
    ||||| |||||||||| ||||||||| ||  ||||||| || ||||||||||| ||||   |||| || ||||||||||| |||||||||||||||| ||    
T  5824 atgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttat 5923  T
Q  201 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |      ||| || |||||||||||||||||||| |||||||| ||| | ||  |||||  ||| ||||||||| |  | |||||||||||||||||    
T  5924 ctcaatcacacacattactcttgtggcctttctcaccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcatt 6020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 610 - 877
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| || || || |||  ||||||||||||||| |  |  ||||| | ||| || ||||||||| |||| || || |||    
T  610 agtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaacttatatgaccctctccattgcagttgtag 709  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || ||||   ||||||||||||| || |||||||| |||||| ||||||| ||   |||||| || ||||||||||    
T  710 cagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaacattgctcttgtggc 809  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    |||| || ||||||||  |||| || ||||||| ||||||||||||| | || |||||||| ||||||    
T  810 ctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 514374 - 514239
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    |||| |||||||| ||||||||||| |||||| |||| || ||   |||||| || ||||||||||||||||| ||||||||  |||| || |||||||     
T  514374 tgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcaga 514275  T
Q  262 aggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||| | || |||||||| ||||||||    
T  514274 aggagcatctctcctcttaggcctcctatcatcatt 514239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 309
Target Start/End: Complemental strand, 1368 - 1146
Alignment:
Q  87 tgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaa 186  Q
    |||||||||  || || ||||||||||||| |||||| |||||  ||| |||||| ||||| || || || |   |||| || ||||  ||||| | |||    
T  1368 tgcactgagagctaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaa 1269  T
Q  187 acacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctc 286  Q
    |||||||||||||||   |  ||| || |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||    
T  1268 acacttcttctcatcacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctc 1169  T
Q  287 ctctcatcattaagtctctgctt 309  Q
    ||||||||||| |||||||||||    
T  1168 ctctcatcattcagtctctgctt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 309
Target Start/End: Complemental strand, 28381 - 28159
Alignment:
Q  87 tgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaa 186  Q
    |||||||||  || || ||||||||||||| |||||| |||||  ||| |||||| ||||| || || || |   |||| || ||||  ||||| | |||    
T  28381 tgcactgagagctaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaa 28282  T
Q  187 acacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctc 286  Q
    |||||||||||||||   |  ||| || |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||    
T  28281 acacttcttctcatcacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctc 28182  T
Q  287 ctctcatcattaagtctctgctt 309  Q
    ||||||||||| |||||||||||    
T  28181 ctctcatcattcagtctctgctt 28159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 270
Target Start/End: Original strand, 36723 - 36889
Alignment:
Q  104 tgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatcct 203  Q
    ||||||||||| || |||||| ||||  ||| |||||  ||||||||||| |||| | | ||||||||||  ||||||| |||||| |||||| | ||||    
T  36723 tgaccctcttccttgcaattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcct 36822  T
Q  204 tggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
      | |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  36823 ctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagcatc 36889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 306
Target Start/End: Original strand, 51842 - 52078
Alignment:
Q  70 aaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccc 169  Q
    ||||||||| ||||| || ||||| | ||| || | ||| ||||||| ||| |||||| |  ||||||||||  |||||||||  ||||   |||| ||     
T  51842 aaccttctttggctgcgtacactgtgaactaatattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcct 51941  T
Q  170 ttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagca 268  Q
    ||||  |||||||| || |||||||||||||| | | | ||| || |||||||||||||||||||| |||||||| ||||| |  ||||||| |||||||    
T  51942 ttcttaccacacctaaagcacttcttctcatc-tcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagca 52040  T
Q  269 tctctcttattcggcctcctctcatcattaagtctctg 306  Q
    |||||| |  | ||||||||||||||||| || |||||    
T  52041 tctctcctcctaggcctcctctcatcattcagcctctg 52078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 432 - 170
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaa 134  Q
    ||||||||||||||||| || || |||||    |||||||||||||| || || || || | ||| || ||||| || ||||| || ||||| ||  |||    
T  432 gtaccagtcaaagcaaacaccttgccaccggtcctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttataacaaacaa 333  T
Q  135 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctc 234  Q
      || || ||||| ||||| |||||  |||| |  ||||| |||||| |||| ||||||||||||||  |   ||| || ||||||||||||||||||||    
T  332 tgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttctc 233  T
Q  235 gccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||| || || || || |||| |||||| |||||  | || |||||||||||||||||    
T  232 gccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatt 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 297
Target Start/End: Original strand, 6069 - 6223
Alignment:
Q  143 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacact 242  Q
    ||||||||||| |||||  |||| || ||||| ||||| ||||| ||||||||||||||  |   ||| || ||||||||||||||||| || |||||||    
T  6069 cgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacact 6168  T
Q  243 taaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    | || || || || |||| | ||||||||||| | || |||||||||||||||||    
T  6169 tgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatt 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 1642 - 1373
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| || ||    || |||||||||||||| || ||||| | |||||| ||||| |||||||| || || |||    
T  1642 agtctgcgtaccagtcaatgcaaacactttccctccggtcctgaccttcttcggctgagtacactgcgaactgatatgaccttcttcattgcagttgtag 1543  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || | ||| || || |||||  |||| |||||||  |||||||| ||||| ||| || ||||  |   |||| | || ||||||||||    
T  1542 caaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccacaagcattgctcttgtggc 1443  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| || ||||||||  |||| || ||||||||||||||||||||| | || |||||||| ||||||||    
T  1442 ctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcatt 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 5877 - 5776
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgc 307  Q
    |||||| ||||||||||||||||| || ||||||||  || | || || |||| ||||||||||||| | || ||||||||||||||||| |||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  308 tt 309  Q
    ||    
T  5777 tt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 297
Target Start/End: Complemental strand, 4458 - 4190
Alignment:
Q  29 gtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagc 128  Q
    ||||| ||||||||||||||||| || || |||||    ||||||||||| ||||| || ||||| | ||| || || || || |||||||| || ||||    
T  4458 gtctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagc 4359  T
Q  129 atccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggt-acaaacgttactcttgtggc 227  Q
    |  ||| ||| || ||||||||||| || |   |||| || ||||| |||||||| || ||||||||||||| || | | ||| || ||||| |||| |     
T  4358 aaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcat-ctcgatcacacacattacttttgtagt 4260  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||| |||||||| || || |  ||||||| ||||||||||||| | || |||||||||||||||||    
T  4259 ctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcatt 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 297
Target Start/End: Original strand, 11170 - 11395
Alignment:
Q  72 ccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccctt 171  Q
    ||||||||||||| || ||||| |  ||||| |||||||||||||| || || |||||  |||  || || ||||| || || |||||   ||| |||||    
T  11170 ccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtccctt 11269  T
Q  172 ctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatct 271  Q
    ||| ||||||||||| |||||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || ||||||| ||||||||||    
T  11270 ctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatct 11369  T
Q  272 ctcttattcggcctcctctcatcatt 297  Q
    ||| | || || ||||| ||||||||    
T  11370 ctcctcttaggactcctatcatcatt 11395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 23944 - 23811
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    ||||||||||||| ||||||||||| |||||| | |||||  |   ||| || |||||||||||||||||||| ||||||||  | || || |||||| |    
T  23944 tgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccacacttgtatcaaacaatctcaac 23845  T
Q  262 aggagcatctctcttattcggcctcctctcatca 295  Q
    ||||||||||||| | || |||||||| ||||||    
T  23844 aggagcatctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 309
Target Start/End: Original strand, 153714 - 153922
Alignment:
Q  101 atgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcat 200  Q
    |||||||| || ||||| || ||||||||  |||  || || ||||| ||||| ||||   |||| || ||||| ||||||||||| |||||||||||||    
T  153714 atgtgaccttcctcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcat 153813  T
Q  201 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaag 300  Q
    |  |   ||| || |||||||| |||| ||| || |||||||| || || || |||||||  |||||||||||| | || ||||||||||||||||| ||    
T  153814 ctctatcacagacattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcag 153913  T
Q  301 tctctgctt 309  Q
    || ||||||    
T  153914 tcgctgctt 153922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 824 - 689
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagc 261  Q
    |||| ||||| || ||||||||||| |||||| |||| || ||   |||||| || ||||||||||||||||| ||| ||||  |||| || |||||||     
T  824 tgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcaga 725  T
Q  262 aggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||||| | || |||||||| ||||||||    
T  724 aggagcatctctcctcttaggcctcctatcatcatt 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 555 - 428
Alignment:
Q  170 ttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    ||||| ||||||||||| ||||||||||||||  |   ||||||  |||| ||||||||||||||||||||||| ||||| || || ||   ||||||||    
T  555 ttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatctataggagcat 456  T
Q  270 ctctcttattcggcctcctctcatcatt 297  Q
    ||||| | || ||||| |||||||||||    
T  455 ctctcctcttgggccttctctcatcatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 1279 - 1190
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||| || ||||||||||||||||| ||||||||  |||| || ||||||||||||||||||||| | || || ||||| ||||||||    
T  1279 acaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggtctcctatcatcatt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 12916 - 13081
Alignment:
Q  68 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgac 167  Q
    ||||||||||| ||||| || ||||| | |||||| ||||| ||||||||||| || |||||  ||||||| || ||||| ||||| ||||   |||| |    
T  12916 ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtc 13015  T
Q  168 ccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttct 233  Q
    | ||||| |||||||| || ||||||||||| ||   |  ||| || |||||||||||||||||||    
T  13016 ctttctgaccacacctaaagcacttcttctcgtcacggtcacatacattactcttgtggcctttct 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 115953 - 116050
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctct 305  Q
    |||||| ||||||||||||||||| || |||||| | ||||| || || |||| ||||||||| ||| | || ||||||||||||||||| |||||||    
T  115953 acaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctct 116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 33342 - 33258
Alignment:
Q  213 cgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| |||||||||||||| || |||||||| ||||| || || ||| |||||||||||||| | || |||||||||||||||||    
T  33342 cgttgctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcatt 33258  T

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Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 32218 - 32270
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  32218 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 32270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 2198 - 2249
Alignment:
Q  246 aacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2198 aacaaactatctcagcaggagcatctctcctattccgcctcctctcatcatt 2249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 30291 - 30212
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||||||| || ||||||||| |||| || |||||||||||||||||| || | || |||||||| ||||||||    
T  30291 ctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcatt 30212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 243
Target Start/End: Original strand, 30083 - 30298
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| |||||| |||| ||||| || |||||||||  |||||||||||||||||  |  ||||| | |||||| ||||||||| |||| || || ||     
T  30083 agtctgcgtaccaatcaatgcaaacacctttccaccatttctaaccttcttcggctcaggacactgcgaactgatatgaccctctccattgcagttgtaa 30182  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| |  ||||| ||||||||||| |||||| |||||||  |   ||||||||| || |||||||    
T  30183 cagacaatgtccccacgcttacattcagctaggttgtgtcttttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggc 30282  T
Q  228 ctttctcgccacactt 243  Q
    ||||||| ||||||||    
T  30283 ctttctcaccacactt 30298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 12080 - 12161
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 243  Q
    ||||||||||||| ||||||||||| |||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  12080 tgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 12161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11958 - 12013
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggct 83  Q
    |||||||||||||||||||||||| || |||||||||| ||||  |||||||||||    
T  11958 agtctgtgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggct 12013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 297
Target Start/End: Complemental strand, 67255 - 66994
Alignment:
Q  36 taccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaac 135  Q
    |||||||||| ||||| ||||||||||||  ||||||| |||||||||   | || || | ||| || ||||| ||| |||| || || |||||  |||     
T  67255 taccagtcaatgcaaacacttttccaccagttctaaccctcttcggctcactacattgcgaactaatatgaccttctccattgcagttgtagcagacaat 67156  T
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
     || ||  |||| || || |||||  |||| ||||| || |||||||||||||| ||| ||||||   |   |||||| || |||||||||||||| ||     
T  67155 gtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttca 67056  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||| |||| || ||||| | ||||||||||||| | || || ||||| ||||||||    
T  67055 ccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatcatt 66994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 36785 - 36733
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||| ||||||||||||||||| |||||||| || |||||||||||||||||    
T  36785 ctcttatggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 36733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 251961 - 252037
Alignment:
Q  221 ttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    ||||||||||| || |||||||| |||||||| |||||| || ||||||||||| | || |||||||| ||||||||    
T  251961 ttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcatt 252037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 229827 - 229741
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatc 294  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  ||||||| |||| ||| |||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatccttcttattaggccgcctatcatc 229741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 453 - 504
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcat 269  Q
    ||||||||||||||||| ||||| |||||||| || ||||||||||||||||    
T  453 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 28949 - 28862
Alignment:
Q  162 tgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaaca 249  Q
    ||||||||||||  ||||||| |||||| |||||  | ||||| | |||||| || ||||||||||||||||||||||| || |||||    
T  28949 tgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccacaattgaaaca 28862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 21944 - 21995
Alignment:
Q  219 tcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  21944 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 37368 - 37419
Alignment:
Q  219 tcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  37368 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 37419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 14007 - 13945
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  14007 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 12418 - 12352
Alignment:
Q  177 cacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 243  Q
    ||||||| || |||||||||||||| ||   | |||| |||||||||||||||||||||||||||||    
T  12418 cacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacactt 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 20598 - 20532
Alignment:
Q  177 cacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 243  Q
    ||||||| || |||||||||||||| ||   | |||| |||||||||||||||||||||||||||||    
T  20598 cacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacactt 20532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 17489 - 17551
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 17551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 270
Target Start/End: Original strand, 101 - 270
Alignment:
Q  101 atgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcat 200  Q
    |||||||||||||||||||| ||  ||||  ||| ||||   ||||||||||| ||||  || ||||||||||  ||||||| || ||| |||||    |    
T  101 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatct 200  T
Q  201 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    | |  | |||||| |||||||||||||||||| ||||||| || ||||| || || || |||||||||||    
T  201 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 13206 - 13037
Alignment:
Q  101 atgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcat 200  Q
    |||||||||||||||||||| ||  ||||  ||| ||||   ||||||||||| ||||  || ||||||||||  ||||||| || ||| |||||    |    
T  13206 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatct 13107  T
Q  201 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    | |  | |||||| |||||||||||||||||| ||||||| || ||||| || || || |||||||||||    
T  13106 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 308
Target Start/End: Original strand, 1196 - 1368
Alignment:
Q  136 atcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 235  Q
    |||||| |||||||| || |||| | | || ||||||| |||||| | ||| ||||||||||| ||     | ||||| |||||||||||||| |||||     
T  1196 atcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctca 1295  T
Q  236 ccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgct 308  Q
    ||||||||  |||| || ||||||| |||| |||| ||  | || || |||||||||||||| | ||||||||    
T  1296 ccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 3215 - 3295
Alignment:
Q  229 tttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||| |||||||| || || |  ||||||| ||||||||||||| | || ||||||||||||||||| | |||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgctt 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 1832 - 1748
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaa 299  Q
    |||||||| |||||||||||||||||   | | ||||| ||||||  |||||||||| ||||  | |||||||||||||||||||    
T  1832 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 4696 - 4612
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaa 299  Q
    |||||||| |||||||||||||||||   | | ||||| ||||||  |||||||||| ||||  | |||||||||||||||||||    
T  4696 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaa 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 379 - 431
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||| ||||    
T  379 ctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 346 - 291
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  346 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 9411 - 9356
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  9411 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 270
Target Start/End: Complemental strand, 15675 - 15492
Alignment:
Q  87 tgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaa 186  Q
    ||||||||| || ||| |||||||| ||||| |||||  ||||  |||  |||  | |||||||||| ||||   | ||||||||||  ||||||| |||    
T  15675 tgcactgagaaccgatatgaccctcatcattgcaattgaagcacacaatgtcattgtgcttgcaatcagctaatgtatgacccttcttgccacaccggaa 15576  T
Q  187 acacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||||  | ||||  | |||||  || ||||||||||||||||| ||||| || ||||| |  ||||| |||||||||||    
T  15575 acacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaattgaaacagatgatctccgcaggagcatc 15492  T

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Target: scaffold0165 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 12151 - 12282
Alignment:
Q  70 aaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatccaacatcaccgcgcttgcaatcggctagcatgtgaccc 169  Q
    ||||||||| ||||| || ||||| | ||| || || || ||||||||||| || |||||  ||| ||| || | ||||||||| || |   |||| ||     
T  12151 aaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcct 12250  T
Q  170 ttctgtccacacctgaaacacttcttctcatc 201  Q
    ||||||||||| ||||||||||||||||||||    
T  12251 ttctgtccacatctgaaacacttcttctcatc 12282  T

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Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 19117 - 19022
Alignment:
Q  35 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcat 130  Q
    |||||||||| |||||| ||||| |||||    |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || |||||||||    
T  19117 gtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcat 19022  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 14420 - 14475
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||||| |||||||||||||||||  ||||||| || ||||| |||||||||||    
T  14420 ttactcttatggcctttctcgccacaagtaaaacagacaatctctgcaggagcatc 14475  T

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Target: scaffold1881 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 455 - 393
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||||||||| || ||||| || ||||| | |||||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagcatc 393  T

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Target: scaffold1220 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 21 - 127
Alignment:
Q  164 tgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcag 263  Q
    ||||||||||  ||||||| |||||| |||||| | ||||| | |||||| || || |||||||||||||| |||||  | ||||| || ||||| |||     
T  21 tgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaatgaaacagacaatctccgcaa 120  T
Q  264 gagcatc 270  Q
    |||||||    
T  121 gagcatc 127  T

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Target: scaffold0708 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 310
Target Start/End: Complemental strand, 5300 - 5018
Alignment:
Q  28 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 127  Q
    |||||| ||||||||||| ||||| ||||| |||||    ||| ||||||||||||| || ||||  | |||||| ||||| ||||| || || || |||    
T  5300 agtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtag 5201  T
Q  128 catccaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaaacacttcttctcatccttggtacaaacgttactcttgtggc 227  Q
    ||  |||  || || ||||| || || |||||  |||| || ||||| |||||||||||||| ||| ||||||   |   |||| | ||  | |||||||    
T  5200 cagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccacaagcattgtttttgtggc 5101  T
Q  228 ctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgcttc 310  Q
    |||| ||  ||| |||  |||| || || |||||||||||||||||| | || |||||||| |||||||| |  |||||||||    
T  5100 ctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttc 5018  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 117 - 179
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatc 179  T

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Target: scaffold0285 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 5327 - 5389
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| |||||||| ||||| ||||||||||| || ||||| || ||||| |||||||||||    
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagcatc 5389  T

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Target: scaffold0270 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 7209 - 7291
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||| ||||||||||| |||||  || | || || |||||| ||||||||||| ||||  | |||||||||||||||||    
T  7209 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcatt 7291  T

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Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 14339 - 14421
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||| ||||||||||| |||||  || | || || |||||| ||||||||||| ||||  | |||||||||||||||||    
T  14339 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcatt 14421  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 11331 - 11269
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||    
T  11331 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 15016 - 14954
Alignment:
Q  208 acaaacgttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||    
T  15016 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 14954  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 16577 - 16495
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||||||||| ||||| ||||||||  | || || | ||||||||||| |||| ||||  | |||||||||||||||||    
T  16577 ttactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcatt 16495  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 57582 - 57500
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcatt 297  Q
    |||||||| |||||||||||||||||  || |  | || |||||| ||||||||||| ||||  | |||||||||||||||||    
T  57582 ttactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcatt 57500  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 18181 - 18275
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatcattaagtctctgctt 309  Q
    |||||||| ||||||||||| |||||  |  | || || |||||||||| ||||||| ||||  | ||||||||||||||||||| ||| |||||    
T  18181 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcattaactctttgctt 18275  T

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Target: scaffold0501 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 263 - 315
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  263 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 7622 - 7570
Alignment:
Q  218 ctcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatc 270  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  7622 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 7570  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 104562 - 104642
Alignment:
Q  215 ttactcttgtggcctttctcgccacacttaaaacacactatctcagcaggagcatctctcttattcggcctcctctcatca 295  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| ||||  | |||| ||||||||||    
T  104562 ttactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatca 104642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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