View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9419_high_2 (Length: 391)
Name: NF9419_high_2
Description: NF9419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9419_high_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 40 - 382
Target Start/End: Original strand, 35938689 - 35939031
Alignment:
| Q |
40 |
ctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaagtttagcaatactgcatctataagt |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35938689 |
ctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaagtttagcaatactgcatctataatc |
35938788 |
T |
|
| Q |
140 |
gcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaata |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
35938789 |
gcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggcatttgatcatagcttaattttagtgcaggtaaaata |
35938888 |
T |
|
| Q |
240 |
tcattttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttca |
339 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35938889 |
tcattttgcttctgttctaaattccatatctcagaatctcttacaaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttca |
35938988 |
T |
|
| Q |
340 |
cagccagtggaactccttgacattttttcacaatttcctttgc |
382 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35938989 |
cagccagtggaactccttgacattttttcacaatttcctttgc |
35939031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 153 - 376
Target Start/End: Original strand, 35981485 - 35981708
Alignment:
| Q |
153 |
tctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatct |
252 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| || || |||||||||||||||| || | ||| |
|
|
| T |
35981485 |
tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct |
35981584 |
T |
|
| Q |
253 |
gttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaac |
352 |
Q |
| |
|
| |||| |||||||| ||||||||| |||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
35981585 |
gctctagattccataactcagaatcccttacaaatacccacttatttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaac |
35981684 |
T |
|
| Q |
353 |
tccttgacattttttcacaatttc |
376 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
35981685 |
tcctcgacattttttcacaatttc |
35981708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 153 - 376
Target Start/End: Original strand, 36002897 - 36003120
Alignment:
| Q |
153 |
tctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatct |
252 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| || || |||||||||||||||| || | ||| |
|
|
| T |
36002897 |
tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct |
36002996 |
T |
|
| Q |
253 |
gttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaac |
352 |
Q |
| |
|
| |||| |||||||| ||||||||| |||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
36002997 |
gctctagattccataactcagaatcccttacaaatacccacttatttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaac |
36003096 |
T |
|
| Q |
353 |
tccttgacattttttcacaatttc |
376 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
36003097 |
tcctcgacattttttcacaatttc |
36003120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 150 - 376
Target Start/End: Complemental strand, 36222201 - 36221975
Alignment:
| Q |
150 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca |
249 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||| |||||||||||||||| || | |
|
|
| T |
36222201 |
taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct |
36222102 |
T |
|
| Q |
250 |
tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg |
349 |
Q |
| |
|
| |||||||| ||||| |||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |
|
|
| T |
36222101 |
tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaaatcaaattttgataacagagaacttcctaatgttttgacagccagcgg |
36222002 |
T |
|
| Q |
350 |
aactccttgacattttttcacaatttc |
376 |
Q |
| |
|
|||||| |||||||||||||||||| |
|
|
| T |
36222001 |
aactccagcacattttttcacaatttc |
36221975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 150 - 376
Target Start/End: Original strand, 32727039 - 32727265
Alignment:
| Q |
150 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca |
249 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| |||||||| |||||||| ||||||||||||||||| || | ||||||||||||||||| || | |
|
|
| T |
32727039 |
taatctttgggataaagggaaaagaaagcaaaacattgcctcaaataggatggcatttgatcatagcttaacttcaatgcaggtaaaatatcatctttct |
32727138 |
T |
|
| Q |
250 |
tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||| || | ||||||| ||||||| |||||| ||||| |
|
|
| T |
32727139 |
tctgttctaaattccatatctcagaatctctcacaaatatccacttatttaaatcatattttgagaataaggaacttcgtaatgttctcacagaaagtgg |
32727238 |
T |
|
| Q |
350 |
aactccttgacattttttcacaatttc |
376 |
Q |
| |
|
||| ||| |||||||||||||||||| |
|
|
| T |
32727239 |
aacccctgcacattttttcacaatttc |
32727265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 144 - 376
Target Start/End: Complemental strand, 36218216 - 36217984
Alignment:
| Q |
144 |
aaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcat |
243 |
Q |
| |
|
||||| || ||||||||||| | ||||||| |||||||||| || |||| || ||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36218216 |
aaggtatagtctttgggatacaaggaaaaacaagcaaaacattgtctcagatatgatggcatttgatcatagcttaattttaaagcaggtaaaatatcat |
36218117 |
T |
|
| Q |
244 |
tttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagc |
343 |
Q |
| |
|
|| | ||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||||||||||||| ||| ||||||| |
|
|
| T |
36218116 |
ctttcttctgttctaaattccatatctcatggtctcttacaaataaccacttatctaaatcaaattttgagaacagagaacttcctaccgttctcacagc |
36218017 |
T |
|
| Q |
344 |
cagtggaactccttgacattttttcacaatttc |
376 |
Q |
| |
|
||| |||||||| |||||||||||||||||| |
|
|
| T |
36218016 |
cagcggaactccagcacattttttcacaatttc |
36217984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 36 - 376
Target Start/End: Original strand, 35957353 - 35957687
Alignment:
| Q |
36 |
tcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaagtttagcaatactgcatctat |
135 |
Q |
| |
|
||||| ||||||| |||| |||| | |||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||| | || | |||| |
|
|
| T |
35957353 |
tcatcaatatatttccttgcaatactttccagcttttcacttccatttagggattgaactaatccaagggctacccaaagattacctatgtcataactat |
35957452 |
T |
|
| Q |
136 |
aagtgcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaa |
235 |
Q |
| |
|
| ||| | |||||||||||||| |||||||||||||||||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
35957453 |
ta------aagatataatctttgggataaagggaaaaataagcaaaacattgtctcagatatgatggcatttgatcataacttaattttagcgcaggtaa |
35957546 |
T |
|
| Q |
236 |
aatatcattttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgtt |
335 |
Q |
| |
|
||||||||| | | |||||||||||||| |||||||| || || | ||||||||||||| ||| |||||| ||||| || ||||||||| |||| ||| |
|
|
| T |
35957547 |
aatatcattaatcttttgttctaaattccacatctcagagtccctaacaaattcccacttacttatatcaaagtttgagaagagagaacttgctaaagtt |
35957646 |
T |
|
| Q |
336 |
ttcacagccagtggaactccttgacattttttcacaatttc |
376 |
Q |
| |
|
|||| || |||||||| ||||| ||||||||||||||||| |
|
|
| T |
35957647 |
ctcacggctagtggaaccccttggcattttttcacaatttc |
35957687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 150 - 376
Target Start/End: Original strand, 35976916 - 35977142
Alignment:
| Q |
150 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca |
249 |
Q |
| |
|
|||||||||||||| ||||||| |||| ||||||| || |||| || ||||| ||||||||||||||||||||||| |||||||||||| ||| || | |
|
|
| T |
35976916 |
taatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttct |
35977015 |
T |
|
| Q |
250 |
tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg |
349 |
Q |
| |
|
| |||||||||||||| |||||||| || || | ||||||||||| ||| |||||| ||||| || |||||||||||||||||| ||||||| || || |
|
|
| T |
35977016 |
tttgttctaaattccacatctcagagtccctaacgaattcccacttgcttatatcaaagtttgagaagagagaacttcctaatgttctcacagctagcgg |
35977115 |
T |
|
| Q |
350 |
aactccttgacattttttcacaatttc |
376 |
Q |
| |
|
||| ||||| || ||||| |||||||| |
|
|
| T |
35977116 |
aaccccttggcacttttttacaatttc |
35977142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 150 - 376
Target Start/End: Original strand, 35998328 - 35998554
Alignment:
| Q |
150 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca |
249 |
Q |
| |
|
|||||||||||||| ||||||| |||| ||||||| || |||| || ||||| ||||||||||||||||||||||| |||||||||||| ||| || | |
|
|
| T |
35998328 |
taatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttct |
35998427 |
T |
|
| Q |
250 |
tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg |
349 |
Q |
| |
|
| |||||||||||||| |||||||| || || | ||||||||||| ||| |||||| ||||| || |||||||||||||||||| ||||||| || || |
|
|
| T |
35998428 |
tttgttctaaattccacatctcagagtccctaacgaattcccacttgcttatatcaaagtttgagaagagagaacttcctaatgttctcacagctagcgg |
35998527 |
T |
|
| Q |
350 |
aactccttgacattttttcacaatttc |
376 |
Q |
| |
|
||| ||||| || ||||| |||||||| |
|
|
| T |
35998528 |
aaccccttggcacttttttacaatttc |
35998554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 155 - 376
Target Start/End: Original strand, 35946258 - 35946479
Alignment:
| Q |
155 |
tttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgt |
254 |
Q |
| |
|
||||||| | || ||||||||||||||||| || || | || ||||| ||||||||||| ||||||||||| |||||||| ||||||| || | | ||| |
|
|
| T |
35946258 |
tttgggaaaaagagaaaaataagcaaaacattgtcttagatatgatggcatttgatcataacttaattttagcgcaggtaagatatcatctttcttttgt |
35946357 |
T |
|
| Q |
255 |
tctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactc |
354 |
Q |
| |
|
||||||||||| |||||||| || || | |||||||||||| ||| |||||| ||||| || ||||||||| |||||||| |||| || |||||||| | |
|
|
| T |
35946358 |
tctaaattccacatctcagagtccctaacgaattcccacttacttatatcaaagtttgagaagagagaacttgctaatgttctcacggctagtggaaccc |
35946457 |
T |
|
| Q |
355 |
cttgacattttttcacaatttc |
376 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
35946458 |
cttggcattttttcacaatttc |
35946479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 195 - 371
Target Start/End: Original strand, 35951937 - 35952113
Alignment:
| Q |
195 |
taggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgttctaaattccatatctcagaatctcttataaattcccact |
294 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||||||||||| || | |||||||||||||| || |||| ||||| | ||||||||||| |
|
|
| T |
35951937 |
taggatgacatttgatcatagcttaatttcagggcaggtaaaatatcatctttctgttgttctaaattccaaatagcagagtctctgacaaattcccact |
35952036 |
T |
|
| Q |
295 |
tatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactccttgacattttttcaca |
371 |
Q |
| |
|
|| ||||||| || ||||| || || |||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35952037 |
tacttaaatcgaagtttgagaagagggaacttcccaatgatttcacagccagtggaaccccttgacattttttcaca |
35952113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 35946134 - 35946224
Alignment:
| Q |
25 |
ttgaatggaattcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaag |
115 |
Q |
| |
|
||||||| |||||||| ||||||| ||||| |||| |||||| |||||| |||||||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
35946134 |
ttgaatgcaattcatcaatatattttcttgcaatactctccagcttttcaattccatttacggattgaactaatccgagggctacccaaag |
35946224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 35976797 - 35976887
Alignment:
| Q |
25 |
ttgaatggaattcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaag |
115 |
Q |
| |
|
||||||| || ||||| ||||||| ||||| |||| |||||| ||||||||||| | | | |||| |||||||||| ||||||||||||| |
|
|
| T |
35976797 |
ttgaatgcaactcatcaatatattttcttgcaatactctccagcttttcacttccctgtagcgattgaactaatccatgggctacccaaag |
35976887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 35998209 - 35998299
Alignment:
| Q |
25 |
ttgaatggaattcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaag |
115 |
Q |
| |
|
||||||| || ||||| ||||||| ||||| |||| |||||| ||||||||||| | | | |||| |||||||||| ||||||||||||| |
|
|
| T |
35998209 |
ttgaatgcaactcatcaatatattttcttgcaatactctccagcttttcacttccctgtagcgattgaactaatccatgggctacccaaag |
35998299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 18125073 - 18125404
Alignment:
| Q |
36 |
tcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaagggctacccaaagtttagcaatactgcatctat |
135 |
Q |
| |
|
||||| ||||||||||||| ||||| ||| | ||||||||||| || |||| || |||||||||||||||||||||||| ||||||| | ||| | |
|
|
| T |
18125073 |
tcatcaatatattctcttgcaatatcctctagtttttcacttccgttccggggttgaactaatccaagggctacccaaag---agcaataat--atcca- |
18125166 |
T |
|
| Q |
136 |
aagtgcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaa |
235 |
Q |
| |
|
|| | | ||| || |||||| ||||| ||||| ||||||||||| || ||||| || |||||||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
18125167 |
aactacagaaagtaatatctttaggataaagggagaaataagcaaagcattgccttaaataggatggcatttggtcatagctcaattttagtgcaggtaa |
18125266 |
T |
|
| Q |
236 |
aatatcattttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgtt |
335 |
Q |
| |
|
|||||||| || ||||| ||||||||| | |||||||||||||| |||| ||| ||||||||||||||||||| || || ||||||||||||||| |
|
|
| T |
18125267 |
aatatcatctttttgctgttttaaattccacagctcagaatctcttacaaatatccatgtatttaaatcaaattttgagaatagggaacttcctaatgtt |
18125366 |
T |
|
| Q |
336 |
ttcacagccagtggaactccttgacattttttcacaat |
373 |
Q |
| |
|
| ||||| |||||||| ||||| |||||||||||||| |
|
|
| T |
18125367 |
ctaacagctagtggaaccccttggcattttttcacaat |
18125404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 18117552 - 18117718
Alignment:
| Q |
174 |
taagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgttctaaattccatatctcag |
273 |
Q |
| |
|
|||||||| |||||||| || |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||||| |
|
|
| T |
18117552 |
taagcaaagcagtgccttaaataggatggcattttatcatagcttaattttagtgcaggtaaaatatcattttgcttttgttctaaagtccacatctcag |
18117651 |
T |
|
| Q |
274 |
aatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcac |
340 |
Q |
| |
|
| |||||| || |||||| ||||||||||||||||||||||||||| | |||||||||||| |||| |
|
|
| T |
18117652 |
agtctcttgcaagttcccatttatttaaatcaaattttgaaaacagacagcttcctaatgttctcac |
18117718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 150 - 340
Target Start/End: Complemental strand, 26329243 - 26329053
Alignment:
| Q |
150 |
taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca |
249 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| || || ||||||||||||||| || |
|
|
| T |
26329243 |
taatctttgggaaaaagggaaaaataagcaaaacaatgtctcaaataggatggcatttgatcatagcttaacttaagcacaggtaaaatatcatctttgt |
26329144 |
T |
|
| Q |
250 |
tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcac |
340 |
Q |
| |
|
| || |||||||||||| | || || || | || | |||||||| ||||||||||||||| || || ||||||||||| |||||||| |
|
|
| T |
26329143 |
tttgccttaaattccatatttgggagtccctgacgaacttccacttatctaaatcaaattttgagaagagtgaacttcctaacgttttcac |
26329053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 26329372 - 26329285
Alignment:
| Q |
15 |
agaaatgacattgaatggaattcatctatatattctcttgaaatattctccatattttcacttccatttcgggattcaactaatccaa |
102 |
Q |
| |
|
|||||||| ||||||| || ||||||||||| ||||||| ||| ||||| | |||| |||||||||| | |||| ||||||||||| |
|
|
| T |
26329372 |
agaaatgatcttgaatgtaactcatctatataatctcttgcaatgttctctagcttttgacttccatttggtgattgaactaatccaa |
26329285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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