View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9419_low_26 (Length: 202)
Name: NF9419_low_26
Description: NF9419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9419_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 35117207 - 35117035
Alignment:
| Q |
5 |
tggagaagcagagatcgattatgaggcaataatttgtaaaattatatgttctgcagaccaacacacttacataattagtcggcatgtaaaattatattag |
104 |
Q |
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| T |
35117207 |
tggataagtagagatcgattatgaggcaataatttgtaaaattatatgttctgcagaccaacacacttacataattagtcggcatgtaaaattatattag |
35117108 |
T |
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| Q |
105 |
aatagaatat-aagcgtttcaccctcatttgatatacgccacatttatacatattacatgagatgattagaagggaaatta |
184 |
Q |
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| T |
35117107 |
aatagaaaatcaagcgtttcaccctcatttgatatacgcc--------acatagtacatgagatgattagaagggaaatta |
35117035 |
T |
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