View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9420_low_41 (Length: 226)

Name: NF9420_low_41
Description: NF9420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9420_low_41
NF9420_low_41
[»] chr8 (39 HSPs)
chr8 (51-145)||(33888767-33888861)
chr8 (139-190)||(33889049-33889100)
chr8 (1-51)||(16388582-16388632)
chr8 (1-51)||(39072020-39072070)
chr8 (1-50)||(2535929-2535978)
chr8 (1-50)||(31608892-31608941)
chr8 (2-51)||(33357497-33357546)
chr8 (6-51)||(36186448-36186493)
chr8 (1-50)||(39071676-39071725)
chr8 (1-53)||(38862942-38862994)
chr8 (1-52)||(4995035-4995086)
chr8 (1-52)||(7306397-7306448)
chr8 (1-52)||(8316651-8316702)
chr8 (1-52)||(13186058-13186109)
chr8 (1-52)||(20386809-20386860)
chr8 (1-51)||(7313384-7313434)
chr8 (1-51)||(8316967-8317017)
chr8 (1-51)||(12198949-12198999)
chr8 (1-51)||(12443377-12443427)
chr8 (1-51)||(13186438-13186488)
chr8 (1-51)||(23663544-23663594)
chr8 (1-51)||(23663893-23663943)
chr8 (1-51)||(34060488-34060538)
chr8 (3-57)||(40318345-40318399)
chr8 (1-50)||(2534695-2534744)
chr8 (1-50)||(16388905-16388954)
chr8 (1-50)||(20385568-20385617)
chr8 (1-50)||(38956051-38956100)
chr8 (3-44)||(40317970-40318011)
chr8 (1-49)||(11763055-11763103)
chr8 (6-50)||(38862618-38862662)
chr8 (1-44)||(1425059-1425102)
chr8 (1-44)||(12273232-12273275)
chr8 (1-51)||(23698623-23698673)
chr8 (1-50)||(4406039-4406088)
chr8 (1-62)||(34176433-34176493)
chr8 (1-50)||(34685636-34685685)
chr8 (1-50)||(42803597-42803646)
chr8 (3-51)||(11761839-11761887)
[»] chr5 (59 HSPs)
chr5 (1-52)||(42265733-42265784)
chr5 (1-57)||(16157234-16157290)
chr5 (1-60)||(5993879-5993938)
chr5 (1-52)||(6150452-6150503)
chr5 (1-52)||(16083322-16083373)
chr5 (1-44)||(21257540-21257583)
chr5 (1-44)||(35512154-35512197)
chr5 (1-51)||(14194422-14194472)
chr5 (1-51)||(20814514-20814564)
chr5 (1-51)||(20840532-20840582)
chr5 (1-51)||(21265521-21265571)
chr5 (1-54)||(18670198-18670251)
chr5 (2-50)||(5024019-5024067)
chr5 (3-51)||(6150801-6150849)
chr5 (1-49)||(18247087-18247135)
chr5 (1-52)||(3528871-3528922)
chr5 (1-44)||(5024397-5024440)
chr5 (1-44)||(8322783-8322826)
chr5 (1-52)||(11761747-11761798)
chr5 (1-52)||(11762096-11762147)
chr5 (1-52)||(18247455-18247506)
chr5 (1-44)||(19892314-19892357)
chr5 (1-52)||(24547504-24547555)
chr5 (1-44)||(35512493-35512536)
chr5 (1-44)||(39453306-39453349)
chr5 (1-52)||(39453678-39453729)
chr5 (1-44)||(43159193-43159236)
chr5 (2-44)||(11740693-11740735)
chr5 (4-50)||(17202781-17202827)
chr5 (1-51)||(20840816-20840866)
chr5 (2-44)||(27937379-27937421)
chr5 (1-51)||(28269421-28269471)
chr5 (1-51)||(28770868-28770918)
chr5 (2-44)||(32242248-32242290)
chr5 (1-51)||(37991198-37991248)
chr5 (1-51)||(38475378-38475428)
chr5 (1-51)||(42067903-42067953)
chr5 (1-50)||(186798-186847)
chr5 (1-50)||(3529221-3529270)
chr5 (1-50)||(27587148-27587197)
chr5 (1-50)||(27587494-27587543)
chr5 (3-52)||(32242622-32242671)
chr5 (4-49)||(38442449-38442494)
chr5 (1-37)||(5994268-5994304)
chr5 (1-49)||(16156856-16156904)
chr5 (1-57)||(17202392-17202448)
chr5 (4-44)||(37992670-37992710)
chr5 (1-44)||(11047815-11047858)
chr5 (1-44)||(13362607-13362650)
chr5 (1-44)||(19892687-19892730)
chr5 (2-44)||(10684317-10684359)
chr5 (1-51)||(13962863-13962913)
chr5 (1-51)||(13963208-13963258)
chr5 (3-49)||(19517988-19518034)
chr5 (1-51)||(20814135-20814185)
chr5 (3-56)||(16082971-16083024)
chr5 (1-50)||(28771217-28771266)
chr5 (1-50)||(35920563-35920612)
chr5 (1-52)||(6301922-6301971)
[»] chr2 (41 HSPs)
chr2 (1-52)||(36382506-36382557)
chr2 (1-52)||(37895345-37895396)
chr2 (1-50)||(10713102-10713151)
chr2 (1-58)||(36480097-36480154)
chr2 (1-52)||(3555248-3555299)
chr2 (1-56)||(25230096-25230151)
chr2 (1-52)||(36755467-36755518)
chr2 (1-51)||(25231227-25231277)
chr2 (1-51)||(44045381-44045431)
chr2 (2-51)||(39423895-39423944)
chr2 (1-57)||(44044107-44044163)
chr2 (1-52)||(2318889-2318940)
chr2 (1-44)||(6588689-6588732)
chr2 (1-52)||(6589738-6589789)
chr2 (1-52)||(15848086-15848137)
chr2 (1-52)||(16099403-16099454)
chr2 (1-44)||(44713801-44713844)
chr2 (1-51)||(11163402-11163452)
chr2 (1-51)||(15848467-15848517)
chr2 (1-51)||(28228669-28228719)
chr2 (1-57)||(28230118-28230174)
chr2 (1-53)||(34447810-34447862)
chr2 (5-44)||(37895730-37895769)
chr2 (1-52)||(45556110-45556161)
chr2 (1-52)||(45556426-45556477)
chr2 (1-51)||(6657877-6657927)
chr2 (1-39)||(13692599-13692637)
chr2 (1-51)||(34448174-34448224)
chr2 (1-51)||(36382160-36382210)
chr2 (1-51)||(39498658-39498708)
chr2 (1-50)||(3556388-3556437)
chr2 (1-50)||(6658226-6658275)
chr2 (1-50)||(9076446-9076495)
chr2 (1-42)||(10712731-10712772)
chr2 (1-50)||(11163054-11163103)
chr2 (1-50)||(30729621-30729670)
chr2 (1-50)||(39423515-39423564)
chr2 (1-49)||(2318160-2318207)
chr2 (2-50)||(21370582-21370630)
chr2 (1-44)||(36479723-36479767)
chr2 (3-51)||(44714142-44714189)
[»] chr4 (61 HSPs)
chr4 (1-51)||(148134-148184)
chr4 (1-51)||(39539297-39539347)
chr4 (2-51)||(24411728-24411777)
chr4 (1-49)||(15507674-15507722)
chr4 (1-52)||(40388485-40388536)
chr4 (1-52)||(46661293-46661344)
chr4 (1-51)||(51692898-51692948)
chr4 (1-51)||(55867493-55867543)
chr4 (1-50)||(147319-147368)
chr4 (1-50)||(18831696-18831745)
chr4 (2-51)||(41583611-41583660)
chr4 (1-50)||(55866111-55866160)
chr4 (1-57)||(48528478-48528534)
chr4 (1-52)||(10780711-10780762)
chr4 (1-52)||(10974320-10974371)
chr4 (1-52)||(14801734-14801785)
chr4 (1-52)||(17355923-17355974)
chr4 (1-52)||(23613307-23613358)
chr4 (1-52)||(24350811-24350862)
chr4 (1-52)||(24711109-24711160)
chr4 (1-52)||(32063715-32063766)
chr4 (4-51)||(34765379-34765426)
chr4 (1-44)||(35028004-35028047)
chr4 (1-52)||(40387465-40387516)
chr4 (1-44)||(43155535-43155578)
chr4 (1-44)||(54086701-54086744)
chr4 (1-51)||(7451833-7451883)
chr4 (1-51)||(10781863-10781913)
chr4 (2-52)||(11448109-11448159)
chr4 (1-51)||(13058036-13058086)
chr4 (2-44)||(15508052-15508094)
chr4 (1-51)||(24349673-24349723)
chr4 (1-51)||(24711459-24711509)
chr4 (1-51)||(29321284-29321334)
chr4 (1-51)||(34765759-34765809)
chr4 (1-51)||(41582446-41582496)
chr4 (1-51)||(50418667-50418717)
chr4 (1-51)||(50419016-50419066)
chr4 (2-52)||(53129886-53129936)
chr4 (1-50)||(7452182-7452231)
chr4 (3-52)||(30642527-30642576)
chr4 (1-54)||(35028377-35028430)
chr4 (2-51)||(51692552-51692601)
chr4 (2-50)||(23613658-23613706)
chr4 (1-49)||(49879208-49879256)
chr4 (1-52)||(1178055-1178106)
chr4 (1-52)||(1179179-1179230)
chr4 (1-52)||(5368945-5368996)
chr4 (1-52)||(13058361-13058412)
chr4 (1-44)||(17356301-17356344)
chr4 (1-52)||(18831347-18831398)
chr4 (1-44)||(37248584-37248627)
chr4 (1-44)||(44967075-44967118)
chr4 (2-44)||(11108220-11108262)
chr4 (1-51)||(44967417-44967467)
chr4 (1-51)||(52909632-52909682)
chr4 (2-44)||(53701818-53701860)
chr4 (2-51)||(37976533-37976582)
chr4 (3-51)||(35508621-35508669)
chr4 (1-49)||(52909254-52909302)
chr4 (20-60)||(54713606-54713646)
[»] chr1 (64 HSPs)
chr1 (1-51)||(6367941-6367991)
chr1 (1-54)||(17661848-17661901)
chr1 (1-57)||(37578571-37578627)
chr1 (1-53)||(46899979-46900031)
chr1 (1-51)||(19515818-19515868)
chr1 (1-51)||(23209706-23209756)
chr1 (1-51)||(30711706-30711756)
chr1 (1-51)||(36694281-36694331)
chr1 (1-51)||(36710382-36710432)
chr1 (1-50)||(6367562-6367611)
chr1 (1-50)||(24009575-24009624)
chr1 (1-50)||(32917639-32917688)
chr1 (1-50)||(34464449-34464498)
chr1 (1-50)||(40772507-40772556)
chr1 (1-50)||(46899061-46899110)
chr1 (1-52)||(1103840-1103891)
chr1 (1-52)||(5735090-5735141)
chr1 (1-52)||(17662229-17662280)
chr1 (1-52)||(25647882-25647933)
chr1 (1-56)||(26024417-26024472)
chr1 (3-50)||(31197065-31197112)
chr1 (1-44)||(37578198-37578241)
chr1 (1-44)||(40435351-40435394)
chr1 (4-51)||(43759204-43759251)
chr1 (1-51)||(5734009-5734059)
chr1 (2-52)||(19017627-19017677)
chr1 (1-51)||(34464828-34464878)
chr1 (1-51)||(35152342-35152392)
chr1 (3-49)||(35152711-35152757)
chr1 (1-51)||(35473630-35473680)
chr1 (1-51)||(41098732-41098782)
chr1 (1-43)||(49723105-49723147)
chr1 (1-50)||(26024771-26024820)
chr1 (1-50)||(34850444-34850493)
chr1 (3-44)||(42533030-42533071)
chr1 (3-51)||(13914067-13914115)
chr1 (1-57)||(17691212-17691268)
chr1 (4-44)||(17692567-17692607)
chr1 (2-50)||(30711327-30711375)
chr1 (4-52)||(40772841-40772889)
chr1 (2-49)||(4960541-4960588)
chr1 (3-50)||(6518177-6518224)
chr1 (1-52)||(7821332-7821383)
chr1 (2-44)||(40439568-40439611)
chr1 (1-44)||(42248479-42248522)
chr1 (1-52)||(51019728-51019779)
chr1 (1-51)||(19018008-19018058)
chr1 (3-57)||(32132297-32132351)
chr1 (1-51)||(36694627-36694677)
chr1 (1-51)||(36710728-36710778)
chr1 (1-51)||(47999471-47999521)
chr1 (1-51)||(51015632-51015682)
chr1 (1-50)||(183221-183270)
chr1 (3-52)||(7820952-7821001)
chr1 (1-58)||(13300283-13300340)
chr1 (3-44)||(23209368-23209408)
chr1 (1-50)||(34849011-34849060)
chr1 (1-50)||(47999123-47999172)
chr1 (3-52)||(48779500-48779549)
chr1 (1-49)||(13914446-13914494)
chr1 (1-41)||(14878980-14879020)
chr1 (3-51)||(19322891-19322939)
chr1 (1-57)||(24009920-24009976)
chr1 (2-50)||(26234430-26234478)
[»] chr3 (43 HSPs)
chr3 (1-50)||(3850506-3850555)
chr3 (1-52)||(33689380-33689431)
chr3 (1-51)||(1079600-1079650)
chr3 (1-51)||(23458358-23458408)
chr3 (2-44)||(26463638-26463680)
chr3 (1-51)||(40033835-40033885)
chr3 (3-57)||(41558263-41558316)
chr3 (1-51)||(47856386-47856436)
chr3 (1-50)||(9294337-9294386)
chr3 (1-50)||(40758147-40758196)
chr3 (1-53)||(19741271-19741323)
chr3 (1-49)||(23276362-23276410)
chr3 (1-41)||(23457988-23458028)
chr3 (1-44)||(36150533-36150576)
chr3 (1-47)||(9368680-9368726)
chr3 (1-51)||(33689758-33689808)
chr3 (1-51)||(40758489-40758539)
chr3 (1-51)||(41558007-41558057)
chr3 (1-51)||(42342790-42342840)
chr3 (2-44)||(42343111-42343153)
chr3 (1-50)||(34142597-34142646)
chr3 (1-50)||(36418067-36418116)
chr3 (1-57)||(25107206-25107262)
chr3 (1-49)||(25108474-25108522)
chr3 (1-52)||(3849029-3849080)
chr3 (1-44)||(9292249-9292292)
chr3 (1-52)||(26463965-26464016)
chr3 (1-48)||(43607782-43607829)
chr3 (1-44)||(46474821-46474864)
chr3 (1-52)||(53856436-53856487)
chr3 (1-51)||(1078536-1078586)
chr3 (1-51)||(2796178-2796228)
chr3 (5-51)||(9367740-9367786)
chr3 (1-51)||(23272823-23272873)
chr3 (1-47)||(32431571-32431617)
chr3 (2-44)||(46475160-46475202)
chr3 (2-44)||(53756750-53756792)
chr3 (7-44)||(21783406-21783443)
chr3 (2-43)||(40033526-40033567)
chr3 (1-50)||(53856015-53856064)
chr3 (1-49)||(35712045-35712093)
chr3 (2-50)||(47857625-47857673)
chr3 (1-49)||(51994265-51994313)
[»] chr7 (47 HSPs)
chr7 (3-51)||(28105500-28105548)
chr7 (1-49)||(42019598-42019646)
chr7 (1-52)||(24389164-24389215)
chr7 (1-52)||(28469008-28469059)
chr7 (1-59)||(2640169-2640227)
chr7 (1-51)||(5457286-5457336)
chr7 (1-51)||(20426709-20426759)
chr7 (1-51)||(27396974-27397024)
chr7 (1-51)||(28469387-28469437)
chr7 (1-51)||(29144361-29144411)
chr7 (1-51)||(45010983-45011033)
chr7 (1-50)||(43123175-43123224)
chr7 (1-57)||(10936173-10936229)
chr7 (1-57)||(13384495-13384551)
chr7 (1-57)||(17102013-17102069)
chr7 (1-52)||(6253819-6253870)
chr7 (1-52)||(6571011-6571062)
chr7 (1-44)||(24388825-24388868)
chr7 (1-52)||(34793902-34793953)
chr7 (1-44)||(40379775-40379818)
chr7 (1-51)||(17102368-17102418)
chr7 (2-52)||(29141556-29141606)
chr7 (1-51)||(48788802-48788852)
chr7 (1-50)||(10935794-10935843)
chr7 (1-50)||(40380063-40380112)
chr7 (1-50)||(42362450-42362499)
chr7 (1-50)||(42731419-42731468)
chr7 (2-51)||(42731799-42731848)
chr7 (1-49)||(6253472-6253520)
chr7 (1-53)||(19204486-19204538)
chr7 (4-52)||(32053141-32053189)
chr7 (5-57)||(32298770-32298822)
chr7 (1-49)||(34799537-34799585)
chr7 (2-50)||(37657217-37657265)
chr7 (1-52)||(22871656-22871707)
chr7 (1-52)||(27396627-27396678)
chr7 (2-57)||(27991732-27991787)
chr7 (1-44)||(27992087-27992130)
chr7 (1-44)||(42019976-42020019)
chr7 (1-51)||(20425477-20425527)
chr7 (2-52)||(30127439-30127489)
chr7 (1-50)||(13386126-13386175)
chr7 (2-51)||(17886870-17886919)
chr7 (5-50)||(18670246-18670291)
chr7 (5-42)||(30128730-30128767)
chr7 (1-49)||(23181373-23181421)
chr7 (1-49)||(32299084-32299132)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-52)||(6458-6509)
[»] chr6 (30 HSPs)
chr6 (1-52)||(679864-679915)
chr6 (1-52)||(3059635-3059686)
chr6 (1-44)||(11434808-11434851)
chr6 (1-60)||(30726138-30726197)
chr6 (1-52)||(33517913-33517964)
chr6 (1-51)||(13379861-13379911)
chr6 (1-51)||(26463178-26463228)
chr6 (1-51)||(33647330-33647380)
chr6 (1-50)||(15116611-15116660)
chr6 (1-52)||(8089441-8089492)
chr6 (1-52)||(17734194-17734245)
chr6 (1-52)||(21628092-21628143)
chr6 (1-51)||(681107-681157)
chr6 (6-44)||(3059263-3059301)
chr6 (1-51)||(8090306-8090356)
chr6 (1-51)||(20651009-20651059)
chr6 (2-52)||(20652027-20652077)
chr6 (2-52)||(21627711-21627761)
chr6 (1-51)||(30337448-30337498)
chr6 (2-44)||(30804241-30804283)
chr6 (1-50)||(12407508-12407557)
chr6 (5-50)||(26464582-26464627)
chr6 (3-51)||(12081017-12081065)
chr6 (1-60)||(22617872-22617932)
chr6 (2-40)||(12080646-12080684)
chr6 (1-51)||(28498404-28498454)
chr6 (1-51)||(29810815-29810865)
chr6 (1-50)||(15115339-15115388)
chr6 (1-50)||(30337797-30337846)
chr6 (1-50)||(30725760-30725808)
[»] scaffold0775 (1 HSPs)
scaffold0775 (2-51)||(4961-5010)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-52)||(2120-2171)
scaffold0007 (1-51)||(1768-1818)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-52)||(37942-37993)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-50)||(14769-14818)
scaffold0075 (3-51)||(14428-14476)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-50)||(68965-69014)
scaffold0031 (1-50)||(69344-69393)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-52)||(24725-24776)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-44)||(19863-19906)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-44)||(139678-139721)


Alignment Details
Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 33888767 - 33888861
Alignment:
Q  51 ttcttttattctatacaaaaaagatgcacaaatataactaaatattattctcttaagtgcagctcaaaaatatcagatgaaacactaataaagta 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33888767 ttcttttattctatacataaaagatgcacaaatataactaaatattattctcttaagtgcagctcaaaaatatcagttgaaacactaataaagta 33888861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 33889049 - 33889100
Alignment:
Q  139 taaagtattatgaatgaagctcaaagtttgaaaatgagcttatatttagaag 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33889049 taaagtattatgaatgaagctcaaagtttgaaaatgagcttatatttagaag 33889100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16388632 - 16388582
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  16388632 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 16388582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39072020 - 39072070
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  39072020 ccaatttttaaacgacccttgattgcaaggatgaaatacatatttaagcct 39072070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2535929 - 2535978
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  2535929 ccaatttttaaatgacccctaattgcagggacgaaatacatattaaagcc 2535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31608892 - 31608941
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  31608892 ccaatttttaaacgacccttaattgcaaggatgaaatacttatttaagcc 31608941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 33357546 - 33357497
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  33357546 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 36186448 - 36186493
Alignment:
Q  6 ttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||    
T  36186448 ttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 36186493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39071725 - 39071676
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  39071725 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 39071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38862942 - 38862994
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttc 53  Q
    |||||||||||||||||| |||||||| |||||||||||||||| || |||||    
T  38862942 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccttc 38862994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4995035 - 4995086
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||||||    
T  4995035 ccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcctt 4995086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7306448 - 7306397
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| || |||||||||| ||||||||||| |||||||    
T  7306448 ccaatttttaaacgacccctatttgcagggatcaaatacatatttaagcctt 7306397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8316702 - 8316651
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| |||||||    
T  8316702 ccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagcctt 8316651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13186109 - 13186058
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| || |||||||| |||||||||||||||| |||||||    
T  13186109 ccaatttttaaacgatccctaattgcaaggatgaaatacatatttaagcctt 13186058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20386809 - 20386860
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  20386809 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 20386860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7313384 - 7313434
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| || |||||||||| ||||||||||| ||||||    
T  7313384 ccaatttttaaacgacccctatttgcagggatcaaatacatatttaagcct 7313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8316967 - 8317017
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  8316967 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 8317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12198999 - 12198949
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  12198999 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 12198949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12443427 - 12443377
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  12443427 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 12443377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13186438 - 13186488
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||| ||||| ||||||    
T  13186438 ccaatttttaaacgacccctaattgcaaggatgaaatatatatttaagcct 13186488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23663594 - 23663544
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| ||||||    
T  23663594 ccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagcct 23663544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23663893 - 23663943
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  23663893 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 23663943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34060538 - 34060488
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  34060538 ccaatttttaaacgacgtttaattgcaaggatgaaatacatatttaagcct 34060488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 40318345 - 40318399
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    ||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||    
T  40318345 aatttttaaacaacccctaattgcaaggatgaaatacatatttaagccttttttt 40318399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2534744 - 2534695
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  2534744 ccaatttttaaacgacccataattgcagggtcgaaatacatatttaagcc 2534695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16388905 - 16388954
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||||    
T  16388905 ccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 16388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20385617 - 20385568
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  20385617 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 20385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38956051 - 38956100
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  38956051 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 38956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40318011 - 40317970
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  40318011 aatttttaaacgacccctaattgcaaggatgaaatacatatt 40317970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11763055 - 11763103
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||| || ||||||||||||||| |||| ||||||||||||    
T  11763055 ccaatttttaaatgatccttaattgcagggacgaaacacatattaaagc 11763103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 38862662 - 38862618
Alignment:
Q  6 ttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||    
T  38862662 ttttaaacggcccttaattgcaaggatgaaatacatatttaagcc 38862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1425102 - 1425059
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  1425102 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 1425059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12273232 - 12273275
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  12273232 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 12273275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23698623 - 23698673
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| ||||||    
T  23698623 ccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcct 23698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4406039 - 4406088
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||| |||| ||||| || |||||||||||||||| |||||    
T  4406039 ccaatttttaaacaacccctaattacaaggatgaaatacatatttaagcc 4406088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34176493 - 34176433
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttttattct 62  Q
    ||||||||||||||||| | ||||||| |||||||||||||||| || ||| ||||| ||||    
T  34176493 ccaatttttaaacgaccat-aattgcaaggatgaaatacatatttaaacctactttttttct 34176433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34685636 - 34685685
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| |||||    
T  34685636 ccaatttttaaacgatccctaattgcaaggataaaatacatatttaagcc 34685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42803597 - 42803646
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||   |||||||| |||||||||||||||| |||||    
T  42803597 ccaatttttaaacgacttctaattgcaaggatgaaatacatatttaagcc 42803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 11761887 - 11761839
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||  | || ||||||||||||||||| ||||||||||||||    
T  11761887 aatttttaaataatccctaattgcagggatgaaaaacatattaaagcct 11761839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42265784 - 42265733
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  42265784 ccaatttttaaacgacccctaattgcagggatgaaatacatatttaagcctt 42265733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16157234 - 16157290
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||    
T  16157234 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccttgtttt 16157290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5993938 - 5993879
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttttatt 60  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||  |||||||    
T  5993938 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaattttatt 5993879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6150503 - 6150452
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  6150503 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 6150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16083322 - 16083373
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  16083322 ccaatttttaaacgatccttaattgcaaggatgaaatacatatttaagcctt 16083373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21257540 - 21257583
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  21257540 ccaatttttaaacgacccctaattgcagggatgaaatacatatt 21257583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35512197 - 35512154
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  35512197 ccaatttttaaacgacccttaattgcaaggatgaaatacatatt 35512154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14194472 - 14194422
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  14194472 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 14194422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20814514 - 20814564
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  20814514 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 20814564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20840582 - 20840532
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  20840582 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 20840532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21265521 - 21265571
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  21265521 ccaatttttaaacgacccttaattgtaaggatgaaatacatatttaagcct 21265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18670251 - 18670198
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttct 54  Q
    |||||||||||||||||| || ||||| |||||||||||||||| |||||||||    
T  18670251 ccaatttttaaacgacccctacttgcaaggatgaaatacatatttaagccttct 18670198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 5024067 - 5024019
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  5024067 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 5024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6150801 - 6150849
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  6150801 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 6150849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18247135 - 18247087
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  18247135 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagc 18247087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3528922 - 3528871
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  3528922 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 3528871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5024397 - 5024440
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  5024397 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 5024440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8322783 - 8322826
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  8322783 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 8322826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11761798 - 11761747
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  11761798 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 11761747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11762096 - 11762147
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  11762096 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 11762147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18247455 - 18247506
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||| ||||||||||||| |||||||| |||||||||||||||| |||||||    
T  18247455 ccaaattttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 18247506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19892357 - 19892314
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  19892357 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 19892314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24547504 - 24547555
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  24547504 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 24547555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35512493 - 35512536
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  35512493 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 35512536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39453349 - 39453306
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  39453349 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 39453306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39453678 - 39453729
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||||||    
T  39453678 ccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcctt 39453729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43159193 - 43159236
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  43159193 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 43159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 11740735 - 11740693
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  11740735 caatttttaaacgacccctaattgcaaggatgaaatacatatt 11740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 17202781 - 17202827
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  17202781 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 17202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20840816 - 20840866
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  20840816 ccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcct 20840866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27937379 - 27937421
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  27937379 caatttttaaacgacccataattgcaaggatgaaatacatatt 27937421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28269471 - 28269421
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  28269471 ccaatttttaaacgacccctaattgcaatgatgaaatacatatttaagcct 28269421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28770918 - 28770868
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  28770918 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 28770868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 32242290 - 32242248
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  32242290 caatttttaaacgacccctaattgcaaggatgaaatacatatt 32242248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37991248 - 37991198
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||||    
T  37991248 ccaatttttaaacgacccctaattgcagggatgaatttcatatttaagcct 37991198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38475378 - 38475428
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| ||||||    
T  38475378 ccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagcct 38475428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42067903 - 42067953
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||| ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  42067903 ccaaattttaaatgacccctaattgcagggatgaaacacatattaaagcct 42067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 186798 - 186847
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||  |||||||| |||||||||||||||| |||||    
T  186798 ccaatttttaaacgacctctaattgcaaggatgaaatacatatttaagcc 186847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3529221 - 3529270
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  3529221 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 3529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27587197 - 27587148
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  27587197 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 27587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27587494 - 27587543
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  27587494 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 27587543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 32242622 - 32242671
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||| |||| |||||||| |||||||||||||||| |||||||    
T  32242622 aatttttaaacaacccctaattgcaaggatgaaatacatatttaagcctt 32242671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 38442449 - 38442494
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||    
T  38442449 atttttaaacgacccctaattgcaaggatgaaatacatatttaagc 38442494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5994268 - 5994304
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaat 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  5994268 ccaatttttaaacgacccttaattgcaaggatgaaat 5994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16156904 - 16156856
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  16156904 ccaatttttaaacgacccctaattgcaagtatgaaatacatatttaagc 16156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17202448 - 17202392
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||||| |||||| | |||||||||| ||||| ||||||| ||||    
T  17202448 ccaatttttaaacgacccctaattggaaggatgaaatatatatttaagccttgtttt 17202392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37992670 - 37992710
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  37992670 atttttaaacgacccctaattgcatggatgaaatacatatt 37992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11047815 - 11047858
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| || ||||| ||||||||||||||||    
T  11047815 ccaatttttaaacgacccctacttgcaaggatgaaatacatatt 11047858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13362607 - 13362650
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| ||||||||  |||||||||||||||    
T  13362607 ccaatttttaaacgacccctaattgcaatgatgaaatacatatt 13362650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19892687 - 19892730
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  19892687 ccaatttttaaacgacctctaattgcaaggatgaaatacatatt 19892730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 10684317 - 10684359
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||| |||||||||  |||||||||||||||    
T  10684317 caatttttaaacgacctttaattgcaaagatgaaatacatatt 10684359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13962913 - 13962863
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||| ||||| ||||||    
T  13962913 ccaatttttaaacgacccctaattgcaaggataaaatatatatttaagcct 13962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13963208 - 13963258
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||| || |||||||||| ||||| ||||||    
T  13963208 ccaatttttaaacgacccataattacaaggatgaaatatatatttaagcct 13963258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 19517988 - 19518034
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||| |||| |||||||| |||||||||||||||| ||||    
T  19517988 aatttttaaactacccctaattgcaaggatgaaatacatatttaagc 19518034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20814185 - 20814135
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||  |||||| | |||||||||||||||| ||||||    
T  20814185 ccaatttttaaacgacctctaattgtaaggatgaaatacatatttaagcct 20814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 16083024 - 16082971
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttt 56  Q
    ||||||||||| |||| |||||| | |||||||||||||||| ||| |||||||    
T  16083024 aatttttaaacaacccctaattggaaggatgaaatacatatttaagtcttcttt 16082971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28771217 - 28771266
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| |||||    
T  28771217 ccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcc 28771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35920563 - 35920612
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||   ||||||||||||||| |||||    
T  35920563 ccaatttttaaacgacccctaattgctatgatgaaatacatatttaagcc 35920612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6301922 - 6301971
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| ||||||||   |||||||||||||| |||||||    
T  6301922 ccaatttttaaacgacccctaattgca--aatgaaatacatatttaagcctt 6301971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36382506 - 36382557
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  36382506 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcctt 36382557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37895396 - 37895345
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  37895396 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcctt 37895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10713102 - 10713151
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  10713102 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcc 10713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36480097 - 36480154
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttta 58  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||    
T  36480097 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagtcttttttta 36480154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3555299 - 3555248
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  3555299 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 3555248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25230151 - 25230096
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttt 56  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||    
T  25230151 ccaatttttaaacgacccctaattgcagggattaaatacatatttaagccatcttt 25230096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36755467 - 36755518
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  36755467 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 36755518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25231227 - 25231277
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  25231227 ccaatttttaaacgacccctaattgcagggattaaatacatatttaagcct 25231277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44045381 - 44045431
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  44045381 ccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcct 44045431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 39423895 - 39423944
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  39423895 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 39423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44044163 - 44044107
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| ||||||| ||||    
T  44044163 ccaatttttaaaccacccctaattgcagggatcaaatacatatttaagccttgtttt 44044107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2318889 - 2318940
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||| | |||||||||||||||| |||||||    
T  2318889 ccaatttttaaacgacccctaattggaaggatgaaatacatatttaagcctt 2318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6588732 - 6588689
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  6588732 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 6588689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6589738 - 6589789
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| ||||||    
T  6589738 ccaatttttaaatgacccttaattgcagggacgaaacacatattatagcctt 6589789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15848137 - 15848086
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  15848137 ccaatttttaaacgacccctaattgcaaggatgaaatacatatataagcctt 15848086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16099403 - 16099454
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  16099403 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 16099454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44713844 - 44713801
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  44713844 ccaatttttaaacgacccttaattacaaggatgaaatacatatt 44713801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11163402 - 11163452
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  11163402 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 11163452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15848467 - 15848517
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| ||||||    
T  15848467 ccaatttttaaacgacccctaattgcaaggatgaaatacttatttaagcct 15848517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28228719 - 28228669
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| |||||||||||| |||| ||||||||||||||    
T  28228719 ccaatttttaaatgacccctaattgcagggacgaaacacatattaaagcct 28228669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28230118 - 28230174
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||| ||||| ||||| |||||| |||| ||||||||||||||| ||||    
T  28230118 ccaatttttaaatgacccataattacagggacgaaacacatattaaagccttatttt 28230174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34447862 - 34447810
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttc 53  Q
    |||||||||||| ||||| ||||| || |||||||||||||||| ||||||||    
T  34447862 ccaatttttaaatgacccctaattacaaggatgaaatacatatttaagccttc 34447810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 37895730 - 37895769
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  37895730 tttttaaacgacccataattgcaaggatgaaatacatatt 37895769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45556161 - 45556110
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| |||||||    
T  45556161 ccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcctt 45556110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45556426 - 45556477
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| |||||||    
T  45556426 ccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcctt 45556477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6657927 - 6657877
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||||  ||||||| |||| ||||||||||| ||||||    
T  6657927 ccaatttttaaacgaccccaaattgcaaggatcaaatacatatttaagcct 6657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13692599 - 13692637
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatac 39  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  13692599 ccaatttttaaacgacccctaattgcaaggatgaaatac 13692637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34448174 - 34448224
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||| |||| |||||||| ||||||||||||| || ||||||    
T  34448174 ccaatttttaaacaacccctaattgcaaggatgaaatacatgtttaagcct 34448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36382210 - 36382160
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||| || |||||||| |||||||||||||| | ||||||    
T  36382210 ccaatttttaaacgaaccctaattgcaaggatgaaatacatacttaagcct 36382160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39498658 - 39498708
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| ||||||    
T  39498658 ccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcct 39498708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3556388 - 3556437
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||  ||||| |||||    
T  3556388 ccaatttttaaacgacccataattgcaaggatgaaatgtatatttaagcc 3556437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6658226 - 6658275
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||  |||||||| |||| ||||||||||| |||||    
T  6658226 ccaatttttaaacgacctctaattgcaaggatcaaatacatatttaagcc 6658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9076446 - 9076495
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| | || ||||||||||| |||||    
T  9076446 ccaatttttaaacgacccctaattgcaagaataaaatacatatttaagcc 9076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10712772 - 10712731
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacata 42  Q
    ||||||||||||||| || |||||||| ||||||||||||||    
T  10712772 ccaatttttaaacgaaccctaattgcaaggatgaaatacata 10712731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11163103 - 11163054
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||| |||||||||  ||| ||||||||||| |||||    
T  11163103 ccaatttttaaacgacctttaattgcaaagatcaaatacatatttaagcc 11163054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30729670 - 30729621
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||   |||||||| |||||||||||||||| |||||    
T  30729670 ccaatttttaaacgacgtctaattgcaaggatgaaatacatatttaagcc 30729621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39423564 - 39423515
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| ||||| || ||||||||||| |||| |||||    
T  39423564 ccaatttttaaacgacccgtaattacaaggatgaaatacgtatttaagcc 39423515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2318207 - 2318160
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||| ||||    
T  2318207 ccaatttttaaactaccct-aattgcaaggatgaaatacatatttaagc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 21370582 - 21370630
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||  ||||| || |||||||||||||||| |||||    
T  21370582 caatttttaaacgacctataattacaaggatgaaatacatatttaagcc 21370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36479767 - 36479723
Alignment:
Q  1 ccaatttttaaacgacccttaattgc-agggatgaaatacatatt 44  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  36479767 ccaatttttaaacgacccctaattgcaaaggatgaaatacatatt 36479723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 44714142 - 44714189
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| |||||||| |||||||| ||||||| ||||||    
T  44714142 aatttttaaacgacccctaattgcaaggatgaaa-acatatttaagcct 44714189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 148134 - 148184
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  148134 ccaatttttaaacgacccctaattgcagggatgaaatacatatttaagcct 148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39539297 - 39539347
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39539297 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 39539347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 24411728 - 24411777
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  24411728 caatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 24411777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15507722 - 15507674
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  15507722 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagc 15507674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 40388485 - 40388536
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  40388485 ccaatttttaaatggcccttaattgcagggatgaaacacatattaaagcctt 40388536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46661293 - 46661344
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  46661293 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 46661344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51692898 - 51692948
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  51692898 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 51692948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 55867493 - 55867543
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  55867493 ccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcct 55867543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 147368 - 147319
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  147368 ccaatttttaaacgacccctaattgtagggatgaaatacatatttaagcc 147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18831696 - 18831745
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  18831696 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 18831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 41583611 - 41583660
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  41583611 caatttttaaatgacccctaattgcagggatgaaacacatattaaagcct 41583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 55866160 - 55866111
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  55866160 ccaatttttaaacgacccctaattgcagggacgaaatacatatttaagcc 55866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48528534 - 48528478
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||    
T  48528534 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccttttttt 48528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10780762 - 10780711
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  10780762 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 10780711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10974371 - 10974320
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  10974371 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 10974320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14801785 - 14801734
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||| | |||||||| |||||||||||||||| |||||||    
T  14801785 ccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcctt 14801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17355974 - 17355923
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||| | |||||||| |||||||||||||||| |||||||    
T  17355974 ccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcctt 17355923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23613358 - 23613307
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  23613358 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 23613307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24350811 - 24350862
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  24350811 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 24350862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24711160 - 24711109
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  24711160 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 24711109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32063715 - 32063766
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| ||||| ||||||||||||  |||||||||||||||||||    
T  32063715 ccaatttttaaatgacccctaattgcagggacaaaatacatattaaagcctt 32063766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 34765426 - 34765379
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  34765426 atttttaaacgacccttaattgcaaggataaaatacatatttaagcct 34765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35028047 - 35028004
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  35028047 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 35028004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40387516 - 40387465
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| | ||| ||||||||||||||||| |||||||||||||||    
T  40387516 ccaatttttaaatggcccctaattgcagggatgaaacacatattaaagcctt 40387465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43155578 - 43155535
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  43155578 ccaatttttaaacgacccttaattgcaaggatcaaatacatatt 43155535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54086744 - 54086701
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  54086744 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 54086701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7451883 - 7451833
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  7451883 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 7451833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10781863 - 10781913
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  10781863 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 10781913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 11448109 - 11448159
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| |||||||    
T  11448109 caatttttaaacgacccctaattacagggacgaaatacatatttaagcctt 11448159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13058086 - 13058036
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  13058086 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 13058036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 15508052 - 15508094
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  15508052 caatttttaaacgacccctaattgcaaggatgaaatacatatt 15508094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24349723 - 24349673
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  24349723 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24349673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24711459 - 24711509
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  24711459 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29321284 - 29321334
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| |||||||||||||| ||| |||| ||||||||||||||    
T  29321284 ccaatttttaaatgacccttaattgcaaggacgaaacacatattaaagcct 29321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34765759 - 34765809
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  34765759 ccaatttttaaacgacccctaattgcaaggataaaatacatatttaagcct 34765809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41582496 - 41582446
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| | ||||||||||||||| ||||||||||||||    
T  41582496 ccaatttttaaatgacccctgattgcagggatgaaacacatattaaagcct 41582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50418717 - 50418667
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  50418717 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 50418667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50419016 - 50419066
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  50419016 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 50419066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 53129886 - 53129936
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||| | |||||| |||||||||||||||| |||||||    
T  53129886 caatttttaaacgacccctgattgcaaggatgaaatacatatttaagcctt 53129936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7452182 - 7452231
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  7452182 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 7452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 30642527 - 30642576
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||| ||||| |||||||||||| |||| |||||||||||||||    
T  30642527 aatttttaaatgacccataattgcagggacgaaacacatattaaagcctt 30642576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35028377 - 35028430
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttct 54  Q
    ||||||||||||  |||| |||||||| |||||||||||||||| |||||||||    
T  35028377 ccaatttttaaaatacccctaattgcaaggatgaaatacatatttaagccttct 35028430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 51692601 - 51692552
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||  |||||||| |||||||||||||||| ||||||    
T  51692601 caatttttaaacgacctctaattgcaaggatgaaatacatatttaagcct 51692552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 23613658 - 23613706
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  23613658 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 23613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49879256 - 49879208
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  49879256 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagc 49879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1178106 - 1178055
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||  ||||| || |||||||||||||||| |||||||    
T  1178106 ccaatttttaaacgacctctaattacaaggatgaaatacatatttaagcctt 1178055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1179179 - 1179230
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| ||||||||  ||| ||||||||||| |||||||    
T  1179179 ccaatttttaaacgacccctaattgcaaagataaaatacatatttaagcctt 1179230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5368996 - 5368945
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| |||||||    
T  5368996 ccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcctt 5368945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13058361 - 13058412
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| | |||||| |||| ||||||||||| |||||||    
T  13058361 ccaatttttaaacgaccccttattgcaaggatcaaatacatatttaagcctt 13058412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17356301 - 17356344
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||| | ||||||||||||||||    
T  17356301 ccaatttttaaacgacccgtaattggaaggatgaaatacatatt 17356344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18831398 - 18831347
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||| | |||| ||||||||||| |||||||    
T  18831398 ccaatttttaaacgacccctaattgtaaggatcaaatacatatttaagcctt 18831347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37248584 - 37248627
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  37248584 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 37248627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44967118 - 44967075
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  44967118 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 44967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 11108220 - 11108262
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||| || |||||||| ||||||||||||||||    
T  11108220 caatttttaaacgatccctaattgcaaggatgaaatacatatt 11108262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44967417 - 44967467
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||  |||||||| |||| ||||||||||| ||||||    
T  44967417 ccaatttttaaacgacctctaattgcaaggatcaaatacatatttaagcct 44967467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52909632 - 52909682
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| || || |||||||| |||||||||||||||| ||||||    
T  52909632 ccaatttttaaatgatccataattgcaaggatgaaatacatatttaagcct 52909682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 53701860 - 53701818
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| |||||||||| |||||    
T  53701860 caatttttaaacgacccctaattgcaaggatgaaatagatatt 53701818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 37976533 - 37976582
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  37976533 caatttttaaacgacccctaattgccatgatgaaatacatatttaagcct 37976582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 35508621 - 35508669
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| ||||||||  ||| ||||||||||| ||||||    
T  35508621 aatttttaaacgacccctaattgcaatgataaaatacatatttaagcct 35508669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52909302 - 52909254
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||| |||||||| ||||||||  ||||||||||||||| ||||    
T  52909302 ccaatttttgaacgacccctaattgcaaagatgaaatacatatttaagc 52909254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 54713646 - 54713606
Alignment:
Q  20 taattgcagggatgaaatacatattaaagccttcttttatt 60  Q
    |||||||| |||||||||||||||| ||||||| |||||||    
T  54713646 taattgcaaggatgaaatacatatttaagcctttttttatt 54713606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6367941 - 6367991
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  6367941 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 6367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17661901 - 17661848
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttct 54  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  17661901 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccttct 17661848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37578571 - 37578627
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||    
T  37578571 ccaatttttaaacgacccccaattgcaaggatgaaatacatatttaagccttctttt 37578627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46899979 - 46900031
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttc 53  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  46899979 ccaatttttaaatgacccttaattgcatggatgaaatacatatttaagccttc 46900031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19515868 - 19515818
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  19515868 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 19515818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23209706 - 23209756
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  23209706 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 23209756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30711706 - 30711756
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  30711706 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 30711756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36694331 - 36694281
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  36694331 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 36694281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36710432 - 36710382
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  36710432 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 36710382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6367611 - 6367562
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  6367611 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 6367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24009624 - 24009575
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24009624 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 24009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32917639 - 32917688
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  32917639 ccaatttttaaacgacccttaattgcaagaatgaaatacatatttaagcc 32917688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34464498 - 34464449
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  34464498 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 34464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40772556 - 40772507
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  40772556 ccaatttttaaacgacccataattgcaaggatgaaatacatatttaagcc 40772507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46899110 - 46899061
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  46899110 ccaatttttaaacgacccctaattgcatggatgaaatacatatttaagcc 46899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1103840 - 1103891
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||| |||||||    
T  1103840 ccaatttttaaacgacctttaattgcaaggatgaaatatatatttaagcctt 1103891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5735090 - 5735141
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  5735090 ccaatttttaaacgattcctaattgcagggatgaaatacatatttaagcctt 5735141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17662229 - 17662280
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| |||||||    
T  17662229 ccaatttttaaacgaccccaaattgcaaggatgaaatacatatttaagcctt 17662280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25647933 - 25647882
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  25647933 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 25647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26024472 - 26024417
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttt 56  Q
    |||||||||||||||||| |||||||| | || ||||||||||| |||||||||||    
T  26024472 ccaatttttaaacgacccctaattgcaagaatcaaatacatatttaagccttcttt 26024417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 31197112 - 31197065
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  31197112 aatttttaaatgacccctaattgcagggatgaaatacatatttaagcc 31197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37578241 - 37578198
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  37578241 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 37578198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40435394 - 40435351
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  40435394 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 40435351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 43759204 - 43759251
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  43759204 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 43759251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5734059 - 5734009
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| ||| |||||||||||| ||||||    
T  5734059 ccaatttttaaacgacccctaattgcaaggacgaaatacatatttaagcct 5734009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 19017677 - 19017627
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| |||| |||||||| |||||||||||||||| |||||||    
T  19017677 caatttttaaacaacccctaattgcaaggatgaaatacatatttaagcctt 19017627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34464828 - 34464878
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||| |||| |||||||| |||||||||||||||| ||||||    
T  34464828 ccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 34464878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35152392 - 35152342
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||  |||||||| |||||||||||||||| ||||||    
T  35152392 ccaatttttaaacgacctctaattgcaaggatgaaatacatatttaagcct 35152342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 35152711 - 35152757
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  35152711 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagc 35152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35473680 - 35473630
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  35473680 ccaatttttaaacgacccctaattgcaaggattaaatacatatttaagcct 35473630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41098782 - 41098732
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||    
T  41098782 ccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagcct 41098732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49723105 - 49723147
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatat 43  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  49723105 ccaatttttaaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26024771 - 26024820
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  26024771 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 26024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34850444 - 34850493
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  34850444 ccaatttttaaacgacccctaattgcaaggattaaatacatatttaagcc 34850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 42533071 - 42533030
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  42533071 aatttttaaacgacccctaattgcaaggatgaaatacatatt 42533030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 13914115 - 13914067
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| |||||||| |||||||||||| ||| ||||||    
T  13914115 aatttttaaacgacccctaattgcaaggatgaaatacacatttaagcct 13914067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17691268 - 17691212
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||||| || ||| | ||| |||||||||||||||||||| ||||    
T  17691268 ccaatttttaaacgacccctacttgtaaggacgaaatacatattaaagccttttttt 17691212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17692567 - 17692607
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  17692567 atttttaaacgacccctaattgcaaggatgaaatacatatt 17692607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 30711375 - 30711327
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| |||| |||||||| |||||||||||||||| |||||    
T  30711375 caatttttaaacaacccctaattgcaaggatgaaatacatatttaagcc 30711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 40772841 - 40772889
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||| ||||||||| |||||||| |||||||||||||||| |||||||    
T  40772841 attttcaaacgacccctaattgcaaggatgaaatacatatttaagcctt 40772889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 4960588 - 4960541
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  4960588 caatttttaaacgacccctaattgcaatgatgaaatacatatttaagc 4960541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 6518177 - 6518224
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||| |||||||| |||||||||| ||||| |||||    
T  6518177 aatttttaaacgacccctaattgcaaggatgaaatatatatttaagcc 6518224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7821332 - 7821383
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||| |||||||||  |||||||| |||||| |||||||    
T  7821332 ccaatttttaaacgacctttaattgcaatgatgaaatgcatatttaagcctt 7821383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 40439568 - 40439611
Alignment:
Q  2 caatttttaaacgaccc-ttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  40439568 caatttttaaacgacccattaattgcaaggatgaaatacatatt 40439611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42248522 - 42248479
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  42248522 ccaatttttaaacgaccactaattgcaaggatgaaatacatatt 42248479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 51019728 - 51019779
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| || |||||||||| || |||||||| |||||||    
T  51019728 ccaatttttaaacgacccctatttgcagggatcaattacatatttaagcctt 51019779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19018008 - 19018058
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||  |||||||| |||| ||||||||||| ||||||    
T  19018008 ccaatttttaaacgacctgtaattgcaaggataaaatacatatttaagcct 19018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 32132351 - 32132297
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||| ||||  |||||| ||||| |||| ||||||||||||||||||||    
T  32132351 aatttttaaatgaccactaattggagggacgaaacacatattaaagccttctttt 32132297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36694627 - 36694677
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||| || | |||||||| |||||||||||||||| ||||||    
T  36694627 ccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagcct 36694677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36710728 - 36710778
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||| || | |||||||| |||||||||||||||| ||||||    
T  36710728 ccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagcct 36710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47999471 - 47999521
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| ||||||    
T  47999471 ccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcct 47999521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51015682 - 51015632
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| || |||||||||| || |||||||| ||||||    
T  51015682 ccaatttttaaacgacccctatttgcagggatcaattacatatttaagcct 51015632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 183270 - 183221
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||| | |||| ||||||||||| |||||    
T  183270 ccaatttttaaacgacccctaattgtaaggatcaaatacatatttaagcc 183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 7821001 - 7820952
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||| ||||| ||||| |||||||| |||||||||||||||| |||||||    
T  7821001 aattattaaaggacccctaattgcaaggatgaaatacatatttaagcctt 7820952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13300283 - 13300340
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttta 58  Q
    |||||||||||||||| | ||||||||  ||||||||||||||| |||| || |||||    
T  13300283 ccaatttttaaacgacgcctaattgcaatgatgaaatacatatttaagcattttttta 13300340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 23209408 - 23209368
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  23209408 aatttttaaacgaccct-aattgcaaggatgaaatacatatt 23209368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34849060 - 34849011
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||| |||||    
T  34849060 ccaatttttaaaagacccctaattgcaaggattaaatacatatttaagcc 34849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47999172 - 47999123
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| |||||    
T  47999172 ccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcc 47999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 48779500 - 48779549
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||| |||| | |||||||| |||||||||||||||| |||||||    
T  48779500 aatttttaagcgactcctaattgcaaggatgaaatacatatttaagcctt 48779549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13914446 - 13914494
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||| |||  |||||||| |||||||||||||||| ||||    
T  13914446 ccaatttttaaacaacctctaattgcaaggatgaaatacatatttaagc 13914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14879020 - 14878980
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacat 41  Q
    |||||||||||||||||| |||||||| |||| ||||||||    
T  14879020 ccaatttttaaacgacccctaattgcaaggataaaatacat 14878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 19322939 - 19322891
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| |||||  | |||||||||||||||| ||||||    
T  19322939 aatttttaaacgacccgtaattataaggatgaaatacatatttaagcct 19322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24009920 - 24009976
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    ||||||||||||||| || |||||||| |||||||||||| ||| || |||| ||||    
T  24009920 ccaatttttaaacgatccctaattgcaaggatgaaatacaaatttaaaccttttttt 24009976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 26234430 - 26234478
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||| |||||| || |||||||||| ||||||||||| |||||    
T  26234430 caatttttaagcgacccctatttgcagggatcaaatacatatttaagcc 26234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3850506 - 3850555
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  3850506 ccaatttttaaacgacccctaattgcagggatgaaatacatatttaagcc 3850555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33689431 - 33689380
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  33689431 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 33689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1079600 - 1079650
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  1079600 ccaatttttaaatgacccctaattgcagggatgaaacacatattaaagcct 1079650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23458358 - 23458408
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  23458358 ccaatttttaaacgacccataattgcaaggatgaaatacatatttaagcct 23458408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26463680 - 26463638
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  26463680 caatttttaaacgacccttaattgcaaggatgaaatacatatt 26463638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40033835 - 40033885
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  40033835 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 40033885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 41558263 - 41558316
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  41558263 aatttttaaacgacccctaattgcagggatgaaatacatatt-tagccttctttt 41558316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47856436 - 47856386
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  47856436 ccaatttttaaacgacgcttaattgcagggacgaaacacatattaaagcct 47856386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9294337 - 9294386
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  9294337 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 9294386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40758196 - 40758147
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  40758196 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 40758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19741271 - 19741323
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttc 53  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  19741271 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccttc 19741323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23276362 - 23276410
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  23276362 ccaatttttaaatgacccctaattgcagggatgaaacacatattaaagc 23276410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23458028 - 23457988
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacat 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  23458028 ccaatttttaaacgacccttaattgcaaggatgaaatacat 23457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36150576 - 36150533
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  36150576 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 36150533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9368680 - 9368726
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaa 47  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  9368680 ccaatttttaaacgacccctaattgcaaggacgaaatacatattaaa 9368726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33689758 - 33689808
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  33689758 ccaatttttaaacgacccctaattgcaaagatgaaatacatatttaagcct 33689808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40758489 - 40758539
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| ||||||    
T  40758489 ccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcct 40758539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41558057 - 41558007
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||    
T  41558057 ccaatttttaaacgacccataattgcaagaatgaaatacatatttaagcct 41558007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42342840 - 42342790
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  42342840 ccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcct 42342790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 42343111 - 42343153
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  42343111 caatttttaaacgacccttaattacaaggatgaaatacatatt 42343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34142597 - 34142646
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  34142597 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 34142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36418067 - 36418116
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| ||||| || |||||||||||||||| |||||    
T  36418067 ccaatttttaaacgacccctaattacaaggatgaaatacatatttaagcc 36418116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25107262 - 25107206
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| | ||||||| ||||    
T  25107262 ccaatttttaaatgacccctaattgcagggatgaaacacatacttaagccttttttt 25107206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25108474 - 25108522
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||| ||||||| ||||| ||||||||||||||||| ||||||||||||    
T  25108474 ccaaattttaaatgacccctaattgcagggatgaaacacatattaaagc 25108522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3849080 - 3849029
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||| | |||||||||||||||| | |||||| |||||||    
T  3849080 ccaatttttaaacgactcctaattgcagggatgaatttcatatttaagcctt 3849029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9292292 - 9292249
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||| || |||||||| ||||||||||||||||    
T  9292292 ccaatttttaaacgatccctaattgcaaggatgaaatacatatt 9292249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26463965 - 26464016
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| |  |||||||| |||||||||||||||| |||||||    
T  26463965 ccaatttttaaacgatctctaattgcaaggatgaaatacatatttaagcctt 26464016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43607829 - 43607782
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaag 48  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||||    
T  43607829 ccaatttttaaatgacgcttaattgcagggacgaaacacatattaaag 43607782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46474864 - 46474821
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| ||||||||  |||||||||||||||    
T  46474864 ccaatttttaaacgacccctaattgcaaagatgaaatacatatt 46474821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53856436 - 53856487
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||| |||||| || |||||||||| ||||||||||| |||||||    
T  53856436 ccaatttttaagcgacccctatttgcagggatcaaatacatatttaagcctt 53856487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1078586 - 1078536
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| |||||||| ||| |||| ||||||||||||||    
T  1078586 ccaatttttaaatgacccctaattgcatggacgaaaaacatattaaagcct 1078536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2796228 - 2796178
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||| ||||||    
T  2796228 ccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcct 2796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 9367786 - 9367740
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  9367786 tttttaaacgacccctaattgtagggattaaatacatatttaagcct 9367740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23272873 - 23272823
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||  | || ||||||||||||||||| ||||||||||||||    
T  23272873 ccaatttttaaataatccctaattgcagggatgaaagacatattaaagcct 23272823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32431571 - 32431617
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaa 47  Q
    |||||||||||| ||||| ||||| |||||| |||||||||||||||    
T  32431571 ccaatttttaaatgacccctaattacagggacgaaatacatattaaa 32431617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 46475160 - 46475202
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||| | ||||||||||||||||    
T  46475160 caatttttaaacgacccctaattgtaaggatgaaatacatatt 46475202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 53756792 - 53756750
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  53756792 caatttttaaacgacccctaattgcaaagatgaaatacatatt 53756750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 21783443 - 21783406
Alignment:
Q  7 tttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| || ||||||||||||||||    
T  21783443 tttaaacgacccttaattacaaggatgaaatacatatt 21783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 40033567 - 40033526
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatat 43  Q
    |||||||||||||| ||||||||||| |||||||||| ||||    
T  40033567 caatttttaaacgatccttaattgcaaggatgaaatatatat 40033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53856064 - 53856015
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||| |||||| || |||||||||| ||||||||||| |||||    
T  53856064 ccaatttttaagcgacccctatttgcagggatcaaatacatatttaagcc 53856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35712093 - 35712045
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||| || || |||||||| |||||||||||||||| ||||    
T  35712093 ccaatttttaaatgatccctaattgcaaggatgaaatacatatttaagc 35712045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 47857625 - 47857673
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| | ||||| |||||| |||| |||||||||||||    
T  47857625 caatttttaaacgacacctaattacagggacgaaacacatattaaagcc 47857673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51994265 - 51994313
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||||| || |||||||| |||| ||||||||||| ||||    
T  51994265 ccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagc 51994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 28105548 - 28105500
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  28105548 aatttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 28105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42019646 - 42019598
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  42019646 ccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagc 42019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24389164 - 24389215
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  24389164 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 24389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28469059 - 28469008
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  28469059 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 28469008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2640227 - 2640169
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttttat 59  Q
    |||||||||||||||||| |||||| | |||||||||||||||| ||||||| ||||||    
T  2640227 ccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagccttattttat 2640169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5457286 - 5457336
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  5457286 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 5457336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20426709 - 20426759
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  20426709 ccaatttttaaacgacctctaattgcagggatgaaatacatatttaagcct 20426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27396974 - 27397024
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  27396974 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 27397024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28469387 - 28469437
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  28469387 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 28469437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29144361 - 29144411
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  29144361 ccaatttttaaacgacccctaattgcagggacgaaatacatatttaagcct 29144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45010983 - 45011033
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  45010983 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 45011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43123224 - 43123175
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  43123224 ccaatttttaaacgacccctaattgcagggacgaaatacatatttaagcc 43123175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10936173 - 10936229
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    ||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||    
T  10936173 ccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagccttttttt 10936229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13384551 - 13384495
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||| |||||| |||||||||||||||||||||||| || |||||||||||| ||||    
T  13384551 ccaaattttaagcgacccttaattgcagggatgaaacacttattaaagccttgtttt 13384495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17102069 - 17102013
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||    
T  17102069 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccttttttt 17102013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6253819 - 6253870
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  6253819 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 6253870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6571062 - 6571011
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  6571062 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 6571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24388868 - 24388825
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  24388868 ccaatttttaaacgacccataattgcaaggatgaaatacatatt 24388825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34793953 - 34793902
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| || |||||||||| ||||||||||| |||||||    
T  34793953 ccaatttttaaacgacccctatttgcagggataaaatacatatttaagcctt 34793902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40379818 - 40379775
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  40379818 ccaatttttaaacgacccctaattgcaaggatgaaatacatatt 40379775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17102368 - 17102418
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  17102368 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 17102418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29141556 - 29141606
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||  |||||||| |||||||||||||||| |||||||    
T  29141556 caatttttaaacgacctctaattgcaaggatgaaatacatatttaagcctt 29141606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48788852 - 48788802
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||||    
T  48788852 ccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagcct 48788802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10935843 - 10935794
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||||||||| ||| |||||    
T  10935843 ccaatttttaaacgacccctaattgcaaggatgaaatacacatttaagcc 10935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40380063 - 40380112
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||| | |||||||| |||||||||||||||| |||||    
T  40380063 ccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcc 40380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42362499 - 42362450
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||| | |||||||| |||||||||||||||| |||||    
T  42362499 ccaatttttaaacgacacctaattgcaaggatgaaatacatatttaagcc 42362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42731468 - 42731419
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| |||||| ||||||||| |||||    
T  42731468 ccaatttttaaacgacccctaattgcaaggatgagatacatatttaagcc 42731419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 42731799 - 42731848
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||| ||||| || |||||||||||||||| ||||||    
T  42731799 caatttttaaacgacccctaattacaaggatgaaatacatatttaagcct 42731848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6253520 - 6253472
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  6253520 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagc 6253472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19204538 - 19204486
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttc 53  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| ||||||||    
T  19204538 ccaatttttaaacgacccctaatttcaaggatcaaatacatatttaagccttc 19204486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 32053189 - 32053141
Alignment:
Q  4 atttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||| ||||| || |||||||||||||||| |||||||    
T  32053189 atttttaaacgacccataattacaaggatgaaatacatatttaagcctt 32053141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32298822 - 32298770
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||    
T  32298822 tttttaaacgacccctaattgcaaggatcaaatacatatttaagccttttttt 32298770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34799537 - 34799585
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  34799537 ccaatttttaaacgacccctatttgcagggatcaaatacatatttaagc 34799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 37657217 - 37657265
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||| || |||||||| |||||||||||||||| |||||    
T  37657217 caatttttaaacgatccctaattgcaaggatgaaatacatatttaagcc 37657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22871656 - 22871707
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||| |||||||    
T  22871656 ccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcctt 22871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27396678 - 27396627
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||| ||| ||||| || |||||||||||||||| |||||||    
T  27396678 ccaatttttaaacggcccctaattacaaggatgaaatacatatttaagcctt 27396627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27991787 - 27991732
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagccttctttt 57  Q
    |||||| |||||||||| |||||||| |||| ||||||||||| ||||||| ||||    
T  27991787 caatttctaaacgacccctaattgcaaggatcaaatacatatttaagccttttttt 27991732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27992087 - 27992130
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  27992087 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 27992130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42019976 - 42020019
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||    
T  42019976 ccaatttttaaacaacccctaattgcaaggatgaaatacatatt 42020019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20425527 - 20425477
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| || || |||||||||||||||| |||||||| ||||||    
T  20425527 ccaatttttaaatgatccctaattgcagggatgaattacatatttaagcct 20425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 30127489 - 30127439
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||| || |||||||||||||  |||||||||| |||||||    
T  30127489 caatttttaaacgatccctaattgcagggattgaatacatatttaagcctt 30127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13386126 - 13386175
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| | || ||||||||||| |||||    
T  13386126 ccaatttttaaacgacccctaattgcaagtattaaatacatatttaagcc 13386175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 17886870 - 17886919
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||| || || |||||||| |||||||||||||||| ||||||    
T  17886870 caatttttaaatgatccctaattgcaaggatgaaatacatatttaagcct 17886919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 18670246 - 18670291
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||| |||||||| |||| ||||||||||| |||||    
T  18670246 tttttaaacgacccctaattgcaaggattaaatacatatttaagcc 18670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 30128730 - 30128767
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacata 42  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  30128730 tttttaaacgacccttaattgcaaggattaaatacata 30128767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23181373 - 23181421
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    ||||| |||||||||||| ||||||||  ||||||||||||||| ||||    
T  23181373 ccaatatttaaacgacccctaattgcaatgatgaaatacatatttaagc 23181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32299084 - 32299132
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagc 49  Q
    |||||||||||||||| | |||||||| |||| ||||||||||| ||||    
T  32299084 ccaatttttaaacgactcctaattgcaaggatcaaatacatatttaagc 32299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6458 - 6509
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  6458 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 679915 - 679864
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  679915 ccaatttttaaacgacccttaattgcaaggatcaaatacatatttaagcctt 679864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3059635 - 3059686
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  3059635 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 3059686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11434851 - 11434808
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  11434851 ccaatttttaaacgacccttaattgcaaggatgaaatacatatt 11434808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30726138 - 30726197
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagccttcttttatt 60  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||  |||||||    
T  30726138 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctatttttatt 30726197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33517913 - 33517964
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  33517913 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctt 33517964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13379861 - 13379911
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  13379861 ccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcct 13379911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26463228 - 26463178
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  26463228 ccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcct 26463178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33647330 - 33647380
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  33647330 ccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33647380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15116611 - 15116660
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  15116611 ccaatttttaaacgacccctaattgcaaggacgaaatacatattaaagcc 15116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8089492 - 8089441
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||||||| | |||||||||| |||||||    
T  8089492 ccaatttttaaacgacccctaattgcagggaggtaatacatatttaagcctt 8089441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17734245 - 17734194
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  17734245 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 17734194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21628092 - 21628143
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||| |||||| |||||||| |||||||||||||||| |||||||    
T  21628092 ccaatttttaagcgacccctaattgcaaggatgaaatacatatttaagcctt 21628143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 681107 - 681157
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  681107 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 681157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 3059301 - 3059263
Alignment:
Q  6 ttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  3059301 ttttaaacgacccttaattgcaaggatgaaatacatatt 3059263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8090306 - 8090356
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| ||||| |||||||||| ||||||    
T  8090306 ccaatttttaaacgacccctaattgcaaggatgtaatacatatttaagcct 8090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20651059 - 20651009
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||| || ||||||||||||| ||||||||||| ||||||    
T  20651059 ccaatttttaaacgatccctaattgcagggatcaaatacatatttaagcct 20651009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20652027 - 20652077
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    ||||||||||||||||| |||||||||| || ||||||||||| |||||||    
T  20652027 caatttttaaacgacccataattgcaggaattaaatacatatttaagcctt 20652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21627761 - 21627711
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||| |||||||| || |||||||||||||||| |||||||    
T  21627761 caatttttaaacgatccttaattacaaggatgaaatacatatttaagcctt 21627711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30337498 - 30337448
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  30337498 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 30337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 30804241 - 30804283
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  30804241 caatttttaaacgacccctaattgcaaggatgaaatacatatt 30804283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12407557 - 12407508
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| ||||||||| | |||||||||||||||| |||||    
T  12407557 ccaatttttaaacgatccttaattgtaaggatgaaatacatatttaagcc 12407508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 26464582 - 26464627
Alignment:
Q  5 tttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||    
T  26464582 tttttaaatgacccctaattgcagggatgaaatacatatttaagcc 26464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 12081017 - 12081065
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||| | |||||||| |||||||||||||||| ||||||    
T  12081017 aatttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 12081065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22617932 - 22617872
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacata-ttaaagccttcttttatt 60  Q
    |||||||||||||||| | |||||||| |||||||||||||| ||||| | ||||||||||    
T  22617932 ccaatttttaaacgactcctaattgcaaggatgaaatacatatttaaacctttcttttatt 22617872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 12080684 - 12080646
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaataca 40  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  12080684 caatttttaaacgacccctaattgcaaggatgaaataca 12080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28498404 - 28498454
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| || || |||||||||||| |||| ||||||||||||||    
T  28498404 ccaatttttaaatgagccctaattgcagggacgaaacacatattaaagcct 28498454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29810815 - 29810865
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||| || || |||||||||||| |||| ||||||||||||||    
T  29810815 ccaatttttaaatgagccctaattgcagggacgaaacacatattaaagcct 29810865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15115388 - 15115339
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||| |  |||||||| |||||||||||||||| |||||    
T  15115388 ccaatttttaaacgatctctaattgcaaggatgaaatacatatttaagcc 15115339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30337797 - 30337846
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||| |||||    
T  30337797 ccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcc 30337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30725808 - 30725760
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| |||||    
T  30725808 ccaatttttaaacgaccct-aattgcaagaatgaaatacatatttaagcc 30725760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 5010 - 4961
Alignment:
Q  2 caatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  5010 caatttttaaacgacccctaattgtagggatgaaatacatatttaagcct 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2120 - 2171
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  2120 ccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctt 2171  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1818 - 1768
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    ||||||||| |||||||| |||||||| |||| ||||||||||| ||||||    
T  1818 ccaattttttaacgacccctaattgcaaggatcaaatacatatttaagcct 1768  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37942 - 37993
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||||||| | |||||||| |||||||||||||||| |||||||    
T  37942 ccaatttttaaacgactcctaattgcaaggatgaaatacatatttaagcctt 37993  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14769 - 14818
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| |||||    
T  14769 ccaatttttaaacgacccctaattgcaaggatgaaattcatatttaagcc 14818  T

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Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 14476 - 14428
Alignment:
Q  3 aatttttaaacgacccttaattgcagggatgaaatacatattaaagcct 51  Q
    |||||||||||||| | ||||||||  ||||||||||||||| ||||||    
T  14476 aatttttaaacgactcctaattgcaatgatgaaatacatatttaagcct 14428  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 69014 - 68965
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||||    
T  69014 ccaatttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 68965  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 69344 - 69393
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcc 50  Q
    ||||||||||||||||   |||||||| |||||||||||||||| |||||    
T  69344 ccaatttttaaacgacatctaattgcaaggatgaaatacatatttaagcc 69393  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24725 - 24776
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatattaaagcctt 52  Q
    |||||||||||| ||||| ||  ||||||||||||| |||||||||||||||    
T  24725 ccaatttttaaatgacccctatatgcagggatgaaaaacatattaaagcctt 24776  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19906 - 19863
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||    
T  19906 ccaatttttaaacgacccataattgcaaggacgaaatacatatt 19863  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 139721 - 139678
Alignment:
Q  1 ccaatttttaaacgacccttaattgcagggatgaaatacatatt 44  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  139721 ccaatttttaaacgacccctaattgcaaggatcaaatacatatt 139678  T

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