View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9420_low_5 (Length: 475)

Name: NF9420_low_5
Description: NF9420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9420_low_5
NF9420_low_5
[»] chr3 (54 HSPs)
chr3 (255-460)||(6110064-6110269)
chr3 (255-460)||(10572594-10572799)
chr3 (255-460)||(15600886-15601091)
chr3 (255-460)||(15607431-15607636)
chr3 (258-460)||(13211305-13211507)
chr3 (255-460)||(13248607-13248812)
chr3 (257-460)||(16482485-16482688)
chr3 (261-460)||(17781120-17781319)
chr3 (261-460)||(10579357-10579556)
chr3 (257-460)||(18522665-18522868)
chr3 (255-460)||(15357588-15357793)
chr3 (255-441)||(8490488-8490674)
chr3 (257-460)||(18519980-18520180)
chr3 (261-460)||(19089747-19089946)
chr3 (257-460)||(17200186-17200389)
chr3 (274-460)||(15342221-15342407)
chr3 (257-460)||(13516813-13517016)
chr3 (255-416)||(18640792-18640953)
chr3 (261-452)||(32056910-32057101)
chr3 (261-460)||(1647523-1647726)
chr3 (257-443)||(16200128-16200313)
chr3 (255-447)||(29924971-29925163)
chr3 (255-447)||(29974124-29974316)
chr3 (257-443)||(16200434-16200619)
chr3 (262-452)||(24253398-24253589)
chr3 (361-460)||(17136465-17136564)
chr3 (257-319)||(18534758-18534820)
chr3 (162-219)||(6109971-6110028)
chr3 (162-219)||(13248514-13248571)
chr3 (163-219)||(8490396-8490452)
chr3 (161-219)||(13211209-13211267)
chr3 (163-219)||(18640989-18641045)
chr3 (163-219)||(17136137-17136193)
chr3 (163-213)||(10579603-10579653)
chr3 (162-219)||(15607672-15607730)
chr3 (162-219)||(15351237-15351294)
chr3 (162-219)||(15357829-15357886)
chr3 (162-219)||(17200427-17200484)
chr3 (257-302)||(18510924-18510969)
chr3 (163-219)||(16482727-16482782)
chr3 (163-219)||(18519885-18519941)
chr3 (162-213)||(10572840-10572891)
chr3 (161-219)||(13516717-13516775)
chr3 (162-219)||(15601127-15601185)
chr3 (162-219)||(17781358-17781415)
chr3 (162-219)||(19089985-19090042)
chr3 (163-219)||(1647768-1647824)
chr3 (163-219)||(32057144-32057200)
chr3 (19-122)||(23046330-23046433)
chr3 (162-219)||(18510828-18510885)
chr3 (162-219)||(18522569-18522626)
chr3 (162-219)||(18534662-18534719)
chr3 (163-219)||(29924879-29924935)
chr3 (163-219)||(29974032-29974088)
[»] scaffold0234 (4 HSPs)
scaffold0234 (255-460)||(2323-2528)
scaffold0234 (255-460)||(11214-11419)
scaffold0234 (162-219)||(2564-2621)
scaffold0234 (162-219)||(11455-11512)
[»] chr4 (49 HSPs)
chr4 (255-460)||(19926762-19926967)
chr4 (255-460)||(26970463-26970668)
chr4 (255-460)||(26963640-26963845)
chr4 (255-460)||(55612683-55612888)
chr4 (255-460)||(868597-868802)
chr4 (255-460)||(5707320-5707525)
chr4 (257-460)||(18262214-18262417)
chr4 (255-460)||(5713948-5714153)
chr4 (255-460)||(10621335-10621540)
chr4 (255-460)||(10628414-10628619)
chr4 (257-460)||(18269070-18269278)
chr4 (257-460)||(28393136-28393339)
chr4 (257-460)||(4426606-4426808)
chr4 (267-452)||(8845215-8845400)
chr4 (267-452)||(8858179-8858364)
chr4 (1-143)||(22339522-22339664)
chr4 (255-370)||(12357136-12357251)
chr4 (263-452)||(20311299-20311489)
chr4 (257-448)||(5616215-5616408)
chr4 (261-447)||(5668140-5668327)
chr4 (261-460)||(10677557-10677753)
chr4 (261-460)||(10891197-10891393)
chr4 (261-348)||(35223576-35223663)
chr4 (162-219)||(5713855-5713912)
chr4 (162-219)||(26963547-26963604)
chr4 (162-219)||(26970370-26970427)
chr4 (163-219)||(19927003-19927059)
chr4 (162-219)||(10621576-10621633)
chr4 (163-219)||(5707228-5707284)
chr4 (163-219)||(12357044-12357100)
chr4 (165-219)||(868507-868561)
chr4 (163-219)||(10628655-10628711)
chr4 (163-219)||(17142372-17142428)
chr4 (163-219)||(55612594-55612650)
chr4 (163-217)||(28393380-28393434)
chr4 (19-97)||(50882036-50882114)
chr4 (162-219)||(18268975-18269032)
chr4 (163-219)||(4426847-4426903)
chr4 (19-97)||(16635416-16635494)
chr4 (304-371)||(39074278-39074346)
chr4 (170-219)||(55992680-55992729)
chr4 (178-219)||(5668371-5668412)
chr4 (171-219)||(8845118-8845166)
chr4 (171-219)||(8858082-8858130)
chr4 (179-219)||(18262136-18262176)
chr4 (281-364)||(21454235-21454319)
chr4 (305-364)||(11161913-11161972)
chr4 (165-219)||(20311207-20311261)
chr4 (171-219)||(24699958-24700006)
[»] chr1 (28 HSPs)
chr1 (255-460)||(18252030-18252235)
chr1 (255-460)||(18532516-18532721)
chr1 (255-460)||(27131411-27131616)
chr1 (257-460)||(21171235-21171438)
chr1 (257-460)||(27310579-27310782)
chr1 (257-460)||(16359037-16359240)
chr1 (261-460)||(36816635-36816834)
chr1 (255-460)||(3855921-3856126)
chr1 (255-460)||(22657223-22657429)
chr1 (261-452)||(27277567-27277756)
chr1 (163-219)||(18251936-18251992)
chr1 (163-219)||(18532757-18532813)
chr1 (289-447)||(12006554-12006712)
chr1 (289-452)||(12014294-12014457)
chr1 (163-219)||(27310821-27310877)
chr1 (163-219)||(16359280-16359336)
chr1 (267-452)||(9917928-9918106)
chr1 (162-219)||(21171479-21171536)
chr1 (19-83)||(7589224-7589288)
chr1 (162-216)||(36816881-36816935)
chr1 (162-219)||(3856164-3856221)
chr1 (162-215)||(22657469-22657522)
chr1 (261-330)||(30720625-30720694)
chr1 (163-219)||(27131652-27131704)
chr1 (19-121)||(24067860-24067962)
chr1 (285-362)||(3403248-3403325)
chr1 (285-362)||(3443494-3443571)
chr1 (163-219)||(27277800-27277856)
[»] scaffold0220 (2 HSPs)
scaffold0220 (255-460)||(18288-18493)
scaffold0220 (163-219)||(18196-18252)
[»] chr7 (28 HSPs)
chr7 (255-460)||(29327784-29327989)
chr7 (255-460)||(11536064-11536269)
chr7 (255-460)||(11542982-11543187)
chr7 (257-460)||(15152445-15152648)
chr7 (257-460)||(15148144-15148347)
chr7 (257-460)||(18561009-18561212)
chr7 (257-460)||(12750828-12751031)
chr7 (261-458)||(12738542-12738739)
chr7 (257-447)||(18257857-18258047)
chr7 (261-443)||(13392157-13392338)
chr7 (162-219)||(11543223-11543280)
chr7 (163-219)||(2653275-2653331)
chr7 (163-219)||(12738443-12738499)
chr7 (277-460)||(2364917-2365099)
chr7 (261-348)||(39111819-39111905)
chr7 (162-219)||(11536305-11536362)
chr7 (162-219)||(12750732-12750789)
chr7 (162-219)||(15152349-15152406)
chr7 (162-218)||(29327689-29327745)
chr7 (288-447)||(7396221-7396381)
chr7 (163-219)||(15148049-15148105)
chr7 (162-218)||(13392029-13392085)
chr7 (329-372)||(3132748-3132791)
chr7 (305-370)||(10234179-10234244)
chr7 (163-219)||(18258087-18258143)
chr7 (255-287)||(2653207-2653239)
chr7 (163-219)||(18560913-18560969)
chr7 (19-83)||(7157465-7157529)
[»] chr6 (29 HSPs)
chr6 (255-460)||(27381254-27381459)
chr6 (255-460)||(27471637-27471842)
chr6 (257-460)||(17684471-17684674)
chr6 (255-460)||(29308890-29309095)
chr6 (255-460)||(29315850-29316055)
chr6 (257-460)||(16566322-16566525)
chr6 (255-460)||(17691442-17691647)
chr6 (257-460)||(188979-189182)
chr6 (257-460)||(25537161-25537364)
chr6 (257-460)||(11651725-11651928)
chr6 (257-445)||(13359286-13359474)
chr6 (294-460)||(20553589-20553755)
chr6 (165-219)||(17691683-17691737)
chr6 (162-219)||(27381495-27381552)
chr6 (162-219)||(27471878-27471935)
chr6 (162-219)||(29308797-29308854)
chr6 (162-219)||(29315757-29315814)
chr6 (162-219)||(17684712-17684769)
chr6 (163-217)||(11651630-11651684)
chr6 (278-460)||(27925772-27925959)
chr6 (162-219)||(25537405-25537462)
chr6 (274-447)||(8509941-8510115)
chr6 (293-460)||(17850497-17850663)
chr6 (262-317)||(31258065-31258120)
chr6 (162-219)||(13359512-13359569)
chr6 (171-219)||(16566563-16566611)
chr6 (163-219)||(189221-189280)
chr6 (177-219)||(16394484-16394526)
chr6 (271-336)||(22259925-22259990)
[»] scaffold0390 (4 HSPs)
scaffold0390 (255-460)||(6936-7141)
scaffold0390 (255-460)||(13952-14157)
scaffold0390 (162-219)||(7177-7234)
scaffold0390 (163-219)||(14193-14249)
[»] chr8 (19 HSPs)
chr8 (255-460)||(21940665-21940870)
chr8 (257-452)||(28554885-28555080)
chr8 (257-460)||(22171491-22171692)
chr8 (261-445)||(6094129-6094313)
chr8 (261-460)||(24642655-24642854)
chr8 (261-388)||(24636860-24636987)
chr8 (163-219)||(21940573-21940629)
chr8 (163-219)||(22070108-22070164)
chr8 (162-219)||(22171395-22171452)
chr8 (162-215)||(24642555-24642608)
chr8 (163-219)||(6094031-6094087)
chr8 (162-219)||(28554790-28554847)
chr8 (285-446)||(32872857-32873019)
chr8 (19-97)||(40755860-40755938)
chr8 (267-459)||(38232380-38232570)
chr8 (276-334)||(2375027-2375085)
chr8 (293-356)||(10920234-10920297)
chr8 (162-216)||(2374946-2375000)
chr8 (163-200)||(24636605-24636642)
[»] chr2 (12 HSPs)
chr2 (255-460)||(21330250-21330455)
chr2 (255-460)||(18796506-18796711)
chr2 (257-452)||(18619807-18620001)
chr2 (261-400)||(19692598-19692737)
chr2 (320-447)||(20977957-20978084)
chr2 (163-219)||(21330493-21330549)
chr2 (289-460)||(36270199-36270371)
chr2 (289-447)||(18822115-18822275)
chr2 (19-97)||(23689061-23689139)
chr2 (162-219)||(19692773-19692830)
chr2 (162-219)||(18796411-18796470)
chr2 (291-446)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (255-460)||(7107-7312)
scaffold0433 (162-219)||(7014-7071)
[»] chr5 (21 HSPs)
chr5 (255-460)||(24695468-24695673)
chr5 (255-460)||(18569865-18570070)
chr5 (257-460)||(19714500-19714703)
chr5 (261-460)||(19707220-19707419)
chr5 (260-443)||(27347497-27347679)
chr5 (261-447)||(22547031-22547217)
chr5 (255-364)||(39537962-39538071)
chr5 (259-440)||(17285754-17285935)
chr5 (162-219)||(24695709-24695766)
chr5 (261-364)||(31886537-31886640)
chr5 (163-219)||(19714742-19714798)
chr5 (259-440)||(17298907-17299088)
chr5 (162-219)||(19707462-19707519)
chr5 (163-219)||(27347722-27347778)
chr5 (321-460)||(18807036-18807175)
chr5 (368-460)||(39538701-39538793)
chr5 (281-371)||(33477389-33477479)
chr5 (162-219)||(18570108-18570165)
chr5 (163-218)||(39537870-39537925)
chr5 (19-97)||(19183638-19183716)
chr5 (305-373)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (255-460)||(993-1198)
scaffold0657 (163-219)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (255-460)||(25992-26197)
scaffold0186 (162-218)||(26231-26287)
[»] scaffold0063 (2 HSPs)
scaffold0063 (257-460)||(5531-5734)
scaffold0063 (162-219)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (257-438)||(230365-230545)
scaffold0008 (163-219)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (255-319)||(8446-8510)
scaffold0176 (162-219)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (162-219)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (162-219)||(16522-16579)
scaffold0326 (255-288)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (162-219)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (163-219)||(8944-9000)
[»] scaffold0565 (2 HSPs)
scaffold0565 (165-219)||(10202-10256)
scaffold0565 (274-305)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (163-199)||(1-37)
[»] scaffold0267 (1 HSPs)
scaffold0267 (19-95)||(8615-8691)
[»] scaffold0170 (1 HSPs)
scaffold0170 (162-215)||(5877-5930)
[»] scaffold0650 (1 HSPs)
scaffold0650 (22-97)||(6516-6591)
[»] scaffold0032 (1 HSPs)
scaffold0032 (284-356)||(92194-92267)
[»] scaffold0453 (1 HSPs)
scaffold0453 (19-83)||(9396-9460)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 6110064 - 6110269
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  455 ctgatg 460  Q
    ||||||    
T  6110264 ctgatg 6110269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 10572799 - 10572594
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  455 ctgatg 460  Q
    ||||||    
T  10572599 ctgatg 10572594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 15601091 - 15600886
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  455 ctgatg 460  Q
    ||||||    
T  15600891 ctgatg 15600886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 15607636 - 15607431
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  455 ctgatg 460  Q
    ||||||    
T  15607436 ctgatg 15607431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 258 - 460
Target Start/End: Original strand, 13211305 - 13211507
Alignment:
Q  258 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  358 ccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactg 457  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  458 atg 460  Q
    |||    
T  13211505 atg 13211507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 13248607 - 13248812
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  455 ctgatg 460  Q
    ||||||    
T  13248807 ctgatg 13248812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 16482688 - 16482485
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  457 gatg 460  Q
    ||||    
T  16482488 gatg 16482485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 17781319 - 17781120
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 10579556 - 10579357
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 18522665 - 18522868
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  457 gatg 460  Q
    ||||    
T  18522865 gatg 18522868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 15357793 - 15357588
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  455 ctgatg 460  Q
    ||||||    
T  15357593 ctgatg 15357588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 255 - 441
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagacta 441  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 18519980 - 18520180
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  457 gatg 460  Q
    ||||    
T  18520177 gatg 18520180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 19089946 - 19089747
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 17200389 - 17200186
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||| ||| |||||| ||| |||||||||||||||||||||||||||||| |||| |||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  457 gatg 460  Q
    ||||    
T  17200189 gatg 17200186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 274 - 460
Target Start/End: Complemental strand, 15342407 - 15342221
Alignment:
Q  274 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 373  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  374 aactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatg 15342221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 13516813 - 13517016
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| |||| |||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  457 gatg 460  Q
    ||||    
T  13517013 gatg 13517016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 255 - 416
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 261 - 452
Target Start/End: Complemental strand, 32057101 - 32056910
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||||||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggta 32056910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 1647726 - 1647523
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagta----taacttaattgtgagac 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||| ||| |||||||  ||||||| |||||||||||||||||||||||| | || |||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  457 gatg 460  Q
    ||||    
T  1647526 gatg 1647523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 257 - 443
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 443  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 255 - 447
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||| ||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 255 - 447
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||| ||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 257 - 443
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 443  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 452
Target Start/End: Complemental strand, 24253589 - 24253398
Alignment:
Q  262 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 360  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| ||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggta 24253398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 17136465 - 17136564
Alignment:
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 6109971 - 6110028
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109971 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 13248514 - 13248571
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248514 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13211209 - 13211267
Alignment:
Q  161 cttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211209 cttgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 10579653 - 10579603
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15607730 - 15607672
Alignment:
Q  162 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607730 ttgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15351294 - 15351237
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351294 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15357886 - 15357829
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357886 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17200484 - 17200427
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200484 ttgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 10572891 - 10572840
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgt 213  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572891 ttgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13516717 - 13516775
Alignment:
Q  161 cttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516717 cttgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15601185 - 15601127
Alignment:
Q  162 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601185 ttgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17781415 - 17781358
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781415 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 19090042 - 19089985
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090042 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 23046433 - 23046330
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaatggtaatacatcttaagtgtta 118  Q
    |||||||||||||| | || |||||| ||||||  ||||||||||||||||| |||| ||||||| ||| |||||||||  || | ||| ||| ||||||    
T  23046433 aaatagacacacaataccaacataacattgcaaaaatctataaaatcgagataaaaaaatgtgtaagtcgagctaaaataatattgcattttacgtgtta 23046334  T
Q  119 tcac 122  Q
    ||||    
T  23046333 tcac 23046330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18510828 - 18510885
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510828 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18522569 - 18522626
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522569 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18534662 - 18534719
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534662 ttgttgtagtaagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 194; Significance: 1e-105; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 2528 - 2323
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  455 ctgatg 460  Q
    ||||||    
T  2328 ctgatg 2323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 11419 - 11214
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  455 ctgatg 460  Q
    ||||||    
T  11219 ctgatg 11214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 2621 - 2564
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2621 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11512 - 11455
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11512 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 19926967 - 19926762
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  455 ctgatg 460  Q
    ||||||    
T  19926767 ctgatg 19926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 26970463 - 26970668
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  455 ctgatg 460  Q
    ||||||    
T  26970663 ctgatg 26970668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 26963640 - 26963845
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  455 ctgatg 460  Q
    ||||||    
T  26963840 ctgatg 26963845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 55612683 - 55612888
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  455 ctgatg 460  Q
    ||||||    
T  55612883 ctgatg 55612888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 868597 - 868802
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  455 ctgatg 460  Q
    ||||||    
T  868797 ctgatg 868802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 5707320 - 5707525
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| |    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  455 ctgatg 460  Q
    ||||||    
T  5707520 ctgatg 5707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 18262214 - 18262417
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  457 gatg 460  Q
    ||||    
T  18262414 gatg 18262417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 5713948 - 5714153
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| |    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  455 ctgatg 460  Q
    ||||||    
T  5714148 ctgatg 5714153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 10621540 - 10621335
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  455 ctgatg 460  Q
    ||||||    
T  10621340 ctgatg 10621335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 10628619 - 10628414
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  455 ctgatg 460  Q
    ||||||    
T  10628419 ctgatg 10628414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 18269070 - 18269278
Alignment:
Q  257 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 351  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  352 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 451  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  452 aaactgatg 460  Q
    | |||||||    
T  18269270 agactgatg 18269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 28393339 - 28393136
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  457 gatg 460  Q
    ||||    
T  28393139 gatg 28393136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 4426808 - 4426606
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  457 gatg 460  Q
    ||||    
T  4426609 gatg 4426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 267 - 452
Target Start/End: Original strand, 8845215 - 8845400
Alignment:
Q  267 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  367 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggta 8845400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 267 - 452
Target Start/End: Original strand, 8858179 - 8858364
Alignment:
Q  267 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  367 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggta 8858364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22339522 - 22339664
Alignment:
Q  1 ttttcgccctttttcatcaaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaatggt 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  22339522 ttttcgcactttttcatcaaatagacatacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtaaatcgagctaaaatggt 22339621  T
Q  101 aatacatcttaagtgttatcaccattttgatgcaagttcatac 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22339622 aatacatcttaagtgttatcaccattttgatgcaagttcatac 22339664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  355 accccattaaacataa 370  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 263 - 452
Target Start/End: Original strand, 20311299 - 20311489
Alignment:
Q  263 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 361  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  362 taaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||||||||||| ||| || | |||||||  || |||||| ||| ||| |||||| |||||||||||||||||||||||||| ||| ||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggta 20311489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 257 - 448
Target Start/End: Original strand, 5616215 - 5616408
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gttttgttgagaagtgggatatcattaaagcatagagactattatgta 448  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  ||||| ||  ||| |||||||| | |||||||| ||||||||||||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgta 5616408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 447
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  361 ttaaacataaggaaactattctcaaag--tatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||| ||| ||| |||  | |||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 10677753 - 10677557
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||||||  || || | |||||| |||||||||||||||||| ||  | | ||| || |||| |||||||| ||| |||||||||||| |||| |||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 10891393 - 10891197
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||||||  || || | |||||| |||||||||||||||||| ||  | | ||| || |||| |||||||| ||| |||||||||||| |||| |||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 35223576 - 35223663
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 348  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat 35223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 5713855 - 5713912
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713855 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 26963547 - 26963604
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963547 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 26970370 - 26970427
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970370 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 10621633 - 10621576
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621633 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  165 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 50882036 - 50882114
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||||| || ||| |||||||||    
T  50882036 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagatcaaaacatgtataagtcgagctaaaat 50882114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18268975 - 18269032
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268975 ttgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 16635494 - 16635416
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    |||||||||| ||| | ||||||||| ||||||  |||||||||||||||||||||| ||||||| ||| |||||||||    
T  16635494 aaatagacacgcaataccagcataacattgcaaaaatctataaaatcgagatcaaaaaatgtgtaagtcgagctaaaat 16635416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  304 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 371  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  170 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  178 taatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  171 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  171 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  179 aatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 21454319 - 21454235
Alignment:
Q  281 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaa 364  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaa 21454235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  305 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 364  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  165 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 24699958 - 24700006
Alignment:
Q  171 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||    
T  24699958 taagcccgaataaccaatctatattgattgaatttggttttgtatcatg 24700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 18252030 - 18252235
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  455 ctgatg 460  Q
    ||||||    
T  18252230 ctgatg 18252235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 18532721 - 18532516
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  455 ctgatg 460  Q
    ||||||    
T  18532521 ctgatg 18532516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 27131616 - 27131411
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  455 ctgatg 460  Q
    ||||||    
T  27131416 ctgatg 27131411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 21171438 - 21171235
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| || ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||| |||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  457 gatg 460  Q
    ||||    
T  21171238 gatg 21171235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 27310782 - 27310579
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    | | || ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  457 gatg 460  Q
    ||||    
T  27310582 gatg 27310579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 16359240 - 16359037
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||||| |||||| || |||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||| |||| |||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  457 gatg 460  Q
    ||||    
T  16359040 gatg 16359037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 36816834 - 36816635
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||||||||||||| | |||||| ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | || |||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 3856126 - 3855921
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||| | |||||| ||| |||  ||||||||  ||| ||| |||||||||||| |||||||||| |||||||||| || |||| |    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  455 ctgatg 460  Q
    ||||||    
T  3855926 ctgatg 3855921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 22657429 - 22657223
Alignment:
Q  255 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 353  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  354 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaa 453  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||| ||| ||  ||| || ||||||||||||||||||||||||| |||| | ||     
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  454 actgatg 460  Q
    |||||||    
T  22657229 actgatg 22657223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 261 - 452
Target Start/End: Complemental strand, 27277756 - 27277567
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||| ||| | ||||||| | |||| ||      
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatt-agtgtgacttaatcgcgaga-cctt 27277659  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||| |  || || | |||||| |||||||||||||||| | ||| ||| |||  |||||| ||||||||||||||||||||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggta 27277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  289 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 388  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  389 atccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    || ||||||||||  ||  || |||| |||||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 452
Target Start/End: Complemental strand, 12014457 - 12014294
Alignment:
Q  289 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 388  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  389 atccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    ||||||||| ||| |||  || |||| ||||||  |||||||| || |||| ||||||| ||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggta 12014294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 452
Target Start/End: Complemental strand, 9918106 - 9917928
Alignment:
Q  267 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 366  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  367 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    ||||||| | |||||| ||| ||||  |||| ||| ||| |||  |||||||||| |||| ||||||||||| || ||||| ||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggta 9917928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 21171536 - 21171479
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171536 ttgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 7589224 - 7589288
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 83  Q
    |||||||||||||| | ||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  7589224 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagatcaaaaaatgtgta 7589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 36816935 - 36816881
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 216  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816935 ttgtcggattaagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 3856221 - 3856164
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| || |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856221 ttgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 22657522 - 22657469
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 215  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657522 ttgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 330  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 24067962 - 24067860
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaatggtaatacatcttaagtgtta 118  Q
    |||||||||||||| | || ||||||  |||||  |||| ||||||| | ||||||||||||||| ||| ||||||||  ||||| ||| ||| ||||||    
T  24067962 aaatagacacacaataccaacataacaatgcaaaaatctgtaaaatcaaaatcaaaacatgtgtaagtcgagctaaaaaagtaatgcattttacgtgtta 24067863  T
Q  119 tca 121  Q
    |||    
T  24067862 tca 24067860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  285 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 362  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  285 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 362  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 18288 - 18493
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  455 ctgatg 460  Q
    ||||||    
T  18488 ctgatg 18493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 29327784 - 29327989
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  455 ctgatg 460  Q
    ||||||    
T  29327984 ctgatg 29327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 11536269 - 11536064
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  455 ctgatg 460  Q
    ||||||    
T  11536069 ctgatg 11536064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 11543187 - 11542982
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  455 ctgatg 460  Q
    ||||||    
T  11542987 ctgatg 11542982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 15152445 - 15152648
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  457 gatg 460  Q
    ||||    
T  15152645 gatg 15152648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 15148144 - 15148347
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  457 gatg 460  Q
    ||||    
T  15148344 gatg 15148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 18561009 - 18561212
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  457 gatg 460  Q
    ||||    
T  18561209 gatg 18561212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 12750828 - 12751031
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    | | |||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| | || |||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  457 gatg 460  Q
    ||||    
T  12751028 gatg 12751031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 261 - 458
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactga 458  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 257 - 447
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||||||| |||  |||| ||||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 443
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 443  Q
    |||||   ||||| | |||||| ||||||||  |||||||  ||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11543280 - 11543223
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543280 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 460
Target Start/End: Original strand, 2364917 - 2365099
Alignment:
Q  277 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 376  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  377 tattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||| ||| ||| |||||||||   || ||| ||| || |||| ||||||| |||||||||||| |||| |||  |||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatg 2365099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 348  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11536362 - 11536305
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536362 ttgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 12750732 - 12750789
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750732 ttgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 15152349 - 15152406
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152349 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 29327689 - 29327745
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 218  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327689 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  288 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 386  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  387 gtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
      ||  |||||||||  ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 13392029 - 13392085
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 218  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392029 ttgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  329 aacattaagtataacttaattgtgagaccccattaaacataagg 372  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  305 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 370  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  255 acaaggcatttctttattgattttgttttgttt 287  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 7157529 - 7157465
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 83  Q
    |||||||||||||| | ||||||||| ||||||  || ||||||||| | ||||||| |||||||    
T  7157529 aaatagacacacaataccagcataacattgcaaaaatttataaaatcaaaatcaaaaaatgtgta 7157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 27381459 - 27381254
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  455 ctgatg 460  Q
    ||||||    
T  27381259 ctgatg 27381254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 27471842 - 27471637
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  455 ctgatg 460  Q
    ||||||    
T  27471642 ctgatg 27471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 17684674 - 17684471
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  457 gatg 460  Q
    ||||    
T  17684474 gatg 17684471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 29308890 - 29309095
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  455 ctgatg 460  Q
    ||||||    
T  29309090 ctgatg 29309095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 29315850 - 29316055
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  455 ctgatg 460  Q
    ||||||    
T  29316050 ctgatg 29316055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 16566525 - 16566322
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  457 gatg 460  Q
    ||||    
T  16566325 gatg 16566322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 17691647 - 17691442
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  455 ctgatg 460  Q
    ||||||    
T  17691447 ctgatg 17691442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 189182 - 188979
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  457 gatg 460  Q
    ||||    
T  188982 gatg 188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 25537364 - 25537161
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  457 gatg 460  Q
    ||||    
T  25537164 gatg 25537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 11651725 - 11651928
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  457 gatg 460  Q
    ||||    
T  11651925 gatg 11651928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 257 - 445
Target Start/End: Complemental strand, 13359474 - 13359286
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattat 445  Q
     |||||||||||||  | | |||| | |||||||||||||||||  ||| ||| ||| ||||| | ||||||||| |||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattat 13359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 294 - 460
Target Start/End: Complemental strand, 20553755 - 20553589
Alignment:
Q  294 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 393  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  394 tagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||| || |||| ||| |||||| ||||  ||||||||||| ||| | |||||| |||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatg 20553589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  165 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 27381552 - 27381495
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381552 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 27471935 - 27471878
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471935 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 29308797 - 29308854
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308797 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 29315757 - 29315814
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315757 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17684769 - 17684712
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684769 ttgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 217  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 460
Target Start/End: Original strand, 27925772 - 27925959
Alignment:
Q  278 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 372  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  373 aaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    ||| |||||| ||||||||  |||||||  ||| ||  ||||||| ||| |||| ||||| | |||||||||||| | ||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatg 27925959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 25537462 - 25537405
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537462 ttgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 447
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  274 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 372  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  373 aaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    |   |||| | |||||||  ||||| ||| ||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 460
Target Start/End: Complemental strand, 17850663 - 17850497
Alignment:
Q  293 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 392  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  393 gtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
     |||||||| ||| ||| |||||   ||| |||| ||| ||| |||||||||| | |||| |||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatg 17850497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  262 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 317  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 13359569 - 13359512
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359569 ttgtgggagtaagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  171 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 189280 - 189221
Alignment:
Q  163 tgttggaataagccctaatagccaatcta---tattgattgggtttggctttgtatcatg 219  Q
    ||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||||||    
T  189280 tgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  177 ctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  271 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 336  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 186; Significance: 1e-100; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 7141 - 6936
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  455 ctgatg 460  Q
    ||||||    
T  6941 ctgatg 6936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 14157 - 13952
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  455 ctgatg 460  Q
    ||||||    
T  13957 ctgatg 13952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 7234 - 7177
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7234 ttgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 21940665 - 21940870
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  455 ctgatg 460  Q
    ||||||    
T  21940865 ctgatg 21940870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 257 - 452
Target Start/End: Original strand, 28554885 - 28555080
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 28555080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 22171491 - 22171692
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  457 gatg 460  Q
    ||||    
T  22171689 gatg 22171692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 261 - 445
Target Start/End: Original strand, 6094129 - 6094313
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattat 445  Q
    |||||||||||||||||||| | |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 6094313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 261 - 460
Target Start/End: Original strand, 24642655 - 24642854
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| |||| |||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 388
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  361 ttaaacataaggaaactattctcaaagt 388  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 22171395 - 22171452
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171395 ttgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 24642555 - 24642608
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 215  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24642555 ttgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 28554790 - 28554847
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554790 ttgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 446
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  285 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 383  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  384 aaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatg 446  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 40755938 - 40755860
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||||||| |||| ||||||| ||| |||||||||    
T  40755938 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagataaaaaaatgtgtaagtcgagctaaaat 40755860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 459
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  267 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 366  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  367 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgat 459  Q
     |||  | | |||||| |||||||  ||||||||  ||| |||  ||||| ||||   |||||||||| | |||||| ||| |||| ||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  276 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 334  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  293 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 2374946 - 2375000
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 216  Q
    |||||||||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  2374946 ttgttggaataagccctaataataaatatgtattgattggatttggctttgtatc 2375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattg 200  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 21330455 - 21330250
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  455 ctgatg 460  Q
    ||||||    
T  21330255 ctgatg 21330250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 18796506 - 18796711
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||||||| |||| |    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  455 ctgatg 460  Q
    ||||||    
T  18796706 ctgatg 18796711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 257 - 452
Target Start/End: Original strand, 18619807 - 18620001
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 452  Q
    ||||||||||| ||||| | |||||| |||||||| || |||||  ||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggta 18620001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaa 400  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 320 - 447
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  320 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtggga 419  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  ||||||||||||| |||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  420 tatcattaaagcatagagactattatgt 447  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 460
Target Start/End: Original strand, 36270199 - 36270371
Alignment:
Q  289 aaaataataaagtccctagaatagttag-tccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 387  Q
    |||||||||||||||||||||||||||| |   || |||| ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  388 tatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
     ||||||| ||||| |||  || |||| |||||| |||||||| ||| |||||||| ||| |||| |||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatg 36270371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  289 aaaataataaagtccctagaatagttagtccgttt-aatgg-aacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 386  Q
    ||||||||||||||  |||||| |||||| ||||| ||||| || ||||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  387 gtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
      ||  ||| ||||| |||  |  |||||||||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 23689139 - 23689061
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    |||||||||||||| | || |||||| ||||||  |||||||||||||||||||||| || |||| ||| |||||||||    
T  23689139 aaatagacacacaataccatcataacattgcaaatatctataaaatcgagatcaaaaaatatgtaagtcgagctaaaat 23689061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 19692830 - 19692773
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692830 ttgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18796411 - 18796470
Alignment:
Q  162 ttgttggaataagccctaatagccaatctata--ttgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||| ||  ||||||||  ||||||| ||||||||||||||||||    
T  18796411 ttgttggattaagccctaacagaaaatctatatattgattgcgtttggctttgtatcatg 18796470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  291 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 389  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  390 tccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatg 446  Q
    |||||| ||||| ||   ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 178; Significance: 8e-96; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 7107 - 7312
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  455 ctgatg 460  Q
    ||||||    
T  7307 ctgatg 7312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 7014 - 7071
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7014 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 8e-96; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 24695673 - 24695468
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||| |    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  455 ctgatg 460  Q
    ||||||    
T  24695473 ctgatg 24695468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 18570070 - 18569865
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| |||| |    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  455 ctgatg 460  Q
    ||||||    
T  18569870 ctgatg 18569865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 19714703 - 19714500
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  457 gatg 460  Q
    ||||    
T  19714503 gatg 19714500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 19707419 - 19707220
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||||||||||| ||||||| ||| |||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 260 - 443
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  260 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 359  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  360 attaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 443  Q
    |||||||  ||||| | |||||| |||||||  ||||||||| ||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 261 - 447
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  361 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 447  Q
    ||||| ||| ||| | |||| | ||||||| || ||||||  ||| ||| |||||| |||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 255 - 364
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  355 accccattaa 364  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 440
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  259 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 358  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  359 cattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagact 440  Q
     | |||||  || || | |||||| ||||||| | ||||| |  ||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 24695766 - 24695709
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695766 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 261 - 364
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  261 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 360  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  361 ttaa 364  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 440
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  259 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 358  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  359 cattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagact 440  Q
     | |||||  || || | |||||| ||||||| | ||||| |  ||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 19707519 - 19707462
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707519 ttgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 460
Target Start/End: Complemental strand, 18807175 - 18807036
Alignment:
Q  321 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagttttgttgagaagtggga 419  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||  || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  420 tatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    || || |||||||||||||||||||||  |||| |||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatg 18807036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 460
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  368 taaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 460  Q
    |||||| |||||||| ||| ||||| |||| ||| ||| ||| |||||||||||||||||||||||  |||||||||||| |||| |||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  281 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 371  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 18570165 - 18570108
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||| || ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570165 ttgttcgagtaagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 218  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 19183716 - 19183638
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    |||||||||||||| | ||| ||||  ||||||  |||||||||||| ||||||||| ||||||| ||| |||||||||    
T  19183716 aaatagacacacaataccagtataaaattgcaaaaatctataaaatcaagatcaaaaaatgtgtaagtcgagctaaaat 19183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  305 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 373  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 174; Significance: 2e-93; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 255 - 460
Target Start/End: Original strand, 993 - 1198
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  455 ctgatg 460  Q
    ||||||    
T  1193 ctgatg 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 901 - 957
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 170; Significance: 5e-91; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 26197 - 25992
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||| |    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  455 ctgatg 460  Q
    ||||||    
T  25997 ctgatg 25992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 26287 - 26231
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26287 ttgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 257 - 460
Target Start/End: Original strand, 5531 - 5734
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 456  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||| |||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  457 gatg 460  Q
    ||||    
T  5731 gatg 5734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 5435 - 5492
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5435 ttgttgaagtaagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 6e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 257 - 438
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  257 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  357 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagaga 438  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 319  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 8603 - 8546
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8603 ttgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 23826 - 23769
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 16522 - 16579
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16522 ttgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  255 acaaggcatttctttattgattttgttttgtttc 288  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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Target: scaffold0705 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 98 - 41
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  98 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

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Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

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Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  165 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 219  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 305
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  274 attttgttttgtttcaaaataataaagtccct 305  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  163 tgttggaataagccctaatagccaatctatattgatt 199  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0267 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8615 - 8691
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaa 95  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||| ||||||||| | |||| ||| |||||||    
T  8615 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgtgatcaaaacttctgtaagtcgagctaaa 8691  T

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Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 5877 - 5930
Alignment:
Q  162 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 215  Q
    |||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  5877 ttgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 6591 - 6516
Alignment:
Q  22 tagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 97  Q
    ||||||||||| | ||||||||| ||||||  ||||||||||||||||| |||| | ||||| ||  |||||||||    
T  6591 tagacacacaataccagcataacattgcaaaaatctataaaatcgagataaaaaaaagtgtaagttgagctaaaat 6516  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  284 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 356  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 9460 - 9396
Alignment:
Q  19 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 83  Q
    |||||||||||||| | ||||||||| ||||||  || ||||||||| | ||||||| |||||||    
T  9460 aaatagacacacaataccagcataacattgcaaaaatttataaaatcaaaatcaaaaaatgtgta 9396  T

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