View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9421_low_48 (Length: 235)

Name: NF9421_low_48
Description: NF9421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9421_low_48
NF9421_low_48
[»] chr7 (77 HSPs)
chr7 (15-219)||(12465221-12465425)
chr7 (17-219)||(12372161-12372363)
chr7 (15-219)||(13147433-13147637)
chr7 (22-219)||(12322898-12323095)
chr7 (23-219)||(8851128-8851324)
chr7 (15-219)||(32433550-32433754)
chr7 (15-219)||(11067355-11067559)
chr7 (14-219)||(12127123-12127328)
chr7 (15-219)||(16999320-16999527)
chr7 (53-219)||(20620173-20620339)
chr7 (49-219)||(20214034-20214204)
chr7 (54-219)||(14180398-14180563)
chr7 (54-219)||(20586239-20586404)
chr7 (54-219)||(46386088-46386253)
chr7 (58-219)||(10277215-10277375)
chr7 (54-219)||(24269947-24270112)
chr7 (15-178)||(47974781-47974944)
chr7 (14-116)||(44374833-44374935)
chr7 (14-116)||(44383698-44383800)
chr7 (48-214)||(33002053-33002211)
chr7 (54-176)||(15095637-15095759)
chr7 (54-176)||(48807325-48807448)
chr7 (54-166)||(14218895-14219008)
chr7 (54-166)||(35771441-35771554)
chr7 (15-106)||(43276705-43276796)
chr7 (54-176)||(8135238-8135359)
chr7 (53-183)||(25943041-25943171)
chr7 (15-158)||(12754574-12754716)
chr7 (54-176)||(15140143-15140265)
chr7 (54-166)||(4071759-4071872)
chr7 (54-154)||(16078281-16078382)
chr7 (54-176)||(13698638-13698761)
chr7 (54-175)||(15623950-15624070)
chr7 (26-106)||(19195611-19195691)
chr7 (26-100)||(18074619-18074693)
chr7 (51-124)||(13744655-13744728)
chr7 (96-176)||(13132363-13132443)
chr7 (22-106)||(19283056-19283140)
chr7 (43-106)||(4690652-4690715)
chr7 (54-135)||(10658851-10658932)
chr7 (54-174)||(12557853-12557973)
chr7 (54-158)||(15289052-15289157)
chr7 (17-84)||(14160819-14160886)
chr7 (14-106)||(38299748-38299842)
chr7 (15-84)||(58374-58443)
chr7 (54-176)||(11054642-11054765)
chr7 (49-155)||(36704566-36704673)
chr7 (14-84)||(13744468-13744540)
chr7 (54-106)||(29052182-29052234)
chr7 (94-174)||(41284963-41285043)
chr7 (15-106)||(32160161-32160252)
chr7 (54-106)||(16250222-16250274)
chr7 (54-106)||(16550005-16550057)
chr7 (54-106)||(16615605-16615657)
chr7 (54-106)||(18955330-18955382)
chr7 (54-162)||(36685146-36685253)
chr7 (176-219)||(25942358-25942401)
chr7 (43-106)||(43745656-43745719)
chr7 (14-72)||(14156352-14156410)
chr7 (42-84)||(25943289-25943331)
chr7 (22-124)||(13315048-13315152)
chr7 (54-147)||(30820151-30820243)
chr7 (14-84)||(37539470-37539542)
chr7 (54-106)||(3287744-3287796)
chr7 (54-102)||(8488094-8488142)
chr7 (54-102)||(8513753-8513801)
chr7 (55-126)||(14928290-14928362)
chr7 (55-126)||(15351756-15351828)
chr7 (54-106)||(18990847-18990899)
chr7 (54-106)||(20252182-20252234)
chr7 (55-155)||(32302177-32302278)
chr7 (42-84)||(8930753-8930795)
chr7 (55-155)||(14259346-14259445)
chr7 (54-106)||(708429-708481)
chr7 (54-106)||(15575649-15575701)
chr7 (54-106)||(18874665-18874717)
chr7 (54-106)||(47095452-47095504)
[»] chr6 (41 HSPs)
chr6 (15-219)||(7827859-7828063)
chr6 (15-219)||(23150248-23150452)
chr6 (23-219)||(19655200-19655396)
chr6 (23-219)||(27125446-27125642)
chr6 (15-219)||(18703451-18703659)
chr6 (15-219)||(18709386-18709594)
chr6 (54-219)||(15890712-15890877)
chr6 (54-204)||(27329981-27330131)
chr6 (54-204)||(27390721-27390871)
chr6 (55-154)||(24267801-24267900)
chr6 (54-215)||(19235015-19235175)
chr6 (57-178)||(18585733-18585854)
chr6 (54-172)||(18928614-18928733)
chr6 (54-214)||(28948466-28948627)
chr6 (54-215)||(30673402-30673556)
chr6 (54-215)||(19167853-19167998)
chr6 (53-172)||(19401028-19401147)
chr6 (53-129)||(27572121-27572198)
chr6 (54-158)||(31731904-31732009)
chr6 (15-106)||(20410473-20410564)
chr6 (54-115)||(15998880-15998941)
chr6 (15-72)||(17318127-17318184)
chr6 (54-157)||(24550168-24550271)
chr6 (54-106)||(12041620-12041672)
chr6 (14-106)||(19825446-19825538)
chr6 (54-176)||(23501601-23501724)
chr6 (14-74)||(25922033-25922093)
chr6 (13-84)||(10446239-10446312)
chr6 (27-84)||(23431420-23431477)
chr6 (54-106)||(15173453-15173505)
chr6 (58-98)||(29625191-29625231)
chr6 (14-106)||(13285748-13285842)
chr6 (144-209)||(18259262-18259328)
chr6 (55-155)||(19772667-19772767)
chr6 (49-106)||(23658089-23658146)
chr6 (54-106)||(15900654-15900706)
chr6 (43-106)||(21683064-21683127)
chr6 (15-84)||(31734729-31734798)
chr6 (42-106)||(29045271-29045335)
chr6 (15-72)||(34140415-34140474)
chr6 (15-72)||(34153031-34153090)
[»] chr4 (43 HSPs)
chr4 (15-219)||(25091540-25091744)
chr4 (15-219)||(53630435-53630639)
chr4 (15-219)||(10356397-10356601)
chr4 (32-224)||(11425825-11426017)
chr4 (15-219)||(42875684-42875888)
chr4 (15-219)||(19610211-19610415)
chr4 (33-219)||(16998412-16998598)
chr4 (54-219)||(15115109-15115274)
chr4 (54-215)||(37019561-37019722)
chr4 (58-219)||(6633541-6633701)
chr4 (58-219)||(46001535-46001695)
chr4 (54-174)||(9924085-9924206)
chr4 (54-171)||(14549695-14549812)
chr4 (54-167)||(19434559-19434672)
chr4 (54-176)||(9870444-9870568)
chr4 (54-172)||(11478653-11478772)
chr4 (23-106)||(10694214-10694297)
chr4 (23-106)||(10907980-10908063)
chr4 (23-106)||(12424259-12424342)
chr4 (54-135)||(15613061-15613142)
chr4 (54-157)||(21144-21248)
chr4 (15-106)||(25513851-25513942)
chr4 (141-207)||(26921708-26921774)
chr4 (15-84)||(40230328-40230397)
chr4 (54-135)||(51993532-51993613)
chr4 (15-106)||(9639010-9639101)
chr4 (15-84)||(19022366-19022435)
chr4 (22-106)||(33186903-33186987)
chr4 (43-106)||(2424376-2424439)
chr4 (53-106)||(35811375-35811428)
chr4 (54-110)||(14186955-14187010)
chr4 (54-106)||(15008963-15009015)
chr4 (54-153)||(21062593-21062693)
chr4 (14-84)||(10273405-10273477)
chr4 (27-84)||(33243267-33243324)
chr4 (54-106)||(16296938-16296990)
chr4 (54-106)||(40620532-40620584)
chr4 (14-84)||(13165154-13165226)
chr4 (144-209)||(27028642-27028708)
chr4 (54-104)||(32466194-32466244)
chr4 (143-176)||(9638939-9638972)
chr4 (54-91)||(14186067-14186104)
chr4 (54-106)||(14631135-14631187)
[»] chr1 (46 HSPs)
chr1 (15-219)||(19676598-19676802)
chr1 (15-219)||(21046010-21046214)
chr1 (27-219)||(16058287-16058478)
chr1 (23-219)||(20633600-20633799)
chr1 (54-219)||(42912936-42913101)
chr1 (54-214)||(51324396-51324556)
chr1 (54-178)||(24723351-24723475)
chr1 (54-158)||(13302849-13302954)
chr1 (54-215)||(21168825-21168985)
chr1 (54-178)||(7051922-7052046)
chr1 (54-176)||(7320594-7320716)
chr1 (22-176)||(22350646-22350796)
chr1 (54-157)||(42697732-42697836)
chr1 (54-203)||(4595853-4595995)
chr1 (15-106)||(12710867-12710958)
chr1 (15-106)||(28476695-28476786)
chr1 (15-84)||(20588660-20588729)
chr1 (15-84)||(20593198-20593267)
chr1 (54-135)||(21239049-21239130)
chr1 (54-106)||(51336479-51336531)
chr1 (14-124)||(8306588-8306698)
chr1 (53-178)||(44822020-44822145)
chr1 (15-84)||(41225415-41225484)
chr1 (15-84)||(41226668-41226737)
chr1 (54-106)||(12327743-12327795)
chr1 (51-124)||(45499374-45499446)
chr1 (54-106)||(29763632-29763684)
chr1 (54-157)||(45755468-45755572)
chr1 (54-106)||(46197745-46197797)
chr1 (54-106)||(50001476-50001528)
chr1 (14-106)||(17901753-17901846)
chr1 (53-106)||(22145665-22145718)
chr1 (23-84)||(34392790-34392853)
chr1 (14-106)||(6834176-6834269)
chr1 (94-155)||(11946391-11946453)
chr1 (143-176)||(8276079-8276112)
chr1 (49-106)||(38056667-38056724)
chr1 (143-176)||(38056762-38056795)
chr1 (14-84)||(45499564-45499635)
chr1 (54-102)||(635004-635052)
chr1 (40-84)||(7703144-7703188)
chr1 (112-159)||(14801337-14801384)
chr1 (112-159)||(14810211-14810258)
chr1 (50-122)||(16401897-16401967)
chr1 (54-90)||(24727383-24727419)
chr1 (54-106)||(50544872-50544924)
[»] chr2 (45 HSPs)
chr2 (23-222)||(5031098-5031297)
chr2 (15-219)||(24780801-24781005)
chr2 (15-219)||(9975816-9976020)
chr2 (15-219)||(24436535-24436739)
chr2 (14-219)||(17307373-17307578)
chr2 (54-219)||(24516073-24516238)
chr2 (15-206)||(22251409-22251600)
chr2 (15-219)||(2523708-2523912)
chr2 (54-219)||(40912207-40912372)
chr2 (43-219)||(19201189-19201365)
chr2 (58-219)||(37270587-37270747)
chr2 (91-219)||(27484514-27484642)
chr2 (102-219)||(36841151-36841268)
chr2 (54-176)||(25142133-25142256)
chr2 (54-178)||(357809-357933)
chr2 (56-178)||(1383545-1383667)
chr2 (22-168)||(27852605-27852748)
chr2 (27-178)||(22501897-22502050)
chr2 (27-178)||(22509831-22509984)
chr2 (54-176)||(3539766-3539889)
chr2 (54-154)||(44072509-44072609)
chr2 (54-157)||(25046066-25046170)
chr2 (54-171)||(22259974-22260090)
chr2 (54-157)||(5986125-5986229)
chr2 (27-102)||(149474-149549)
chr2 (23-106)||(21369293-21369376)
chr2 (15-84)||(14179689-14179758)
chr2 (54-176)||(19358820-19358943)
chr2 (15-66)||(36841267-36841318)
chr2 (69-166)||(18390229-18390326)
chr2 (15-84)||(14183427-14183496)
chr2 (54-106)||(21080969-21081021)
chr2 (15-78)||(31521197-31521260)
chr2 (123-177)||(24884399-24884453)
chr2 (49-155)||(14694276-14694383)
chr2 (15-87)||(20916326-20916398)
chr2 (54-106)||(25184189-25184241)
chr2 (54-176)||(18388190-18388312)
chr2 (41-84)||(23801518-23801561)
chr2 (27-106)||(12626399-12626478)
chr2 (62-106)||(18357975-18358019)
chr2 (54-106)||(21315476-21315528)
chr2 (54-106)||(21335266-21335318)
chr2 (58-106)||(21915624-21915672)
chr2 (45-106)||(23610626-23610687)
[»] scaffold0737 (2 HSPs)
scaffold0737 (15-219)||(4675-4879)
scaffold0737 (58-176)||(5821-5941)
[»] scaffold1283 (1 HSPs)
scaffold1283 (15-219)||(429-633)
[»] scaffold0064 (1 HSPs)
scaffold0064 (15-219)||(58633-58837)
[»] chr3 (65 HSPs)
chr3 (27-219)||(17044853-17045045)
chr3 (15-207)||(22306544-22306736)
chr3 (15-219)||(17047013-17047217)
chr3 (22-228)||(49900608-49900814)
chr3 (27-219)||(17518846-17519038)
chr3 (27-219)||(17533708-17533900)
chr3 (22-219)||(35354489-35354686)
chr3 (54-219)||(40807883-40808048)
chr3 (15-219)||(11259318-11259522)
chr3 (15-219)||(17693954-17694158)
chr3 (23-217)||(41172340-41172534)
chr3 (15-219)||(17538993-17539197)
chr3 (54-219)||(40812720-40812885)
chr3 (54-219)||(44274305-44274470)
chr3 (69-219)||(50348041-50348191)
chr3 (15-219)||(15931469-15931672)
chr3 (54-219)||(10563596-10563760)
chr3 (58-219)||(10311415-10311575)
chr3 (27-203)||(14508749-14508926)
chr3 (15-117)||(17541423-17541525)
chr3 (54-214)||(19568208-19568368)
chr3 (79-171)||(35064566-35064658)
chr3 (43-176)||(11563654-11563788)
chr3 (54-174)||(33565018-33565139)
chr3 (54-214)||(9510916-9511076)
chr3 (54-214)||(9518891-9519051)
chr3 (54-176)||(42323971-42324094)
chr3 (54-174)||(35960928-35961049)
chr3 (54-158)||(16050875-16050979)
chr3 (54-166)||(13185834-13185947)
chr3 (155-219)||(35064681-35064745)
chr3 (22-176)||(45530571-45530725)
chr3 (53-176)||(49968858-49968981)
chr3 (27-106)||(15566744-15566823)
chr3 (161-219)||(5200277-5200335)
chr3 (54-158)||(24177736-24177840)
chr3 (57-155)||(11885560-11885658)
chr3 (71-176)||(37038978-37039085)
chr3 (54-135)||(12509350-12509431)
chr3 (54-106)||(15446868-15446920)
chr3 (13-75)||(50347594-50347656)
chr3 (14-102)||(14641508-14641596)
chr3 (54-122)||(36528851-36528919)
chr3 (54-95)||(5200243-5200284)
chr3 (15-61)||(17325582-17325628)
chr3 (27-84)||(6159427-6159484)
chr3 (53-106)||(22652773-22652826)
chr3 (31-84)||(50350793-50350846)
chr3 (27-84)||(53646032-53646089)
chr3 (57-157)||(14250085-14250185)
chr3 (54-106)||(16979912-16979964)
chr3 (54-106)||(17208524-17208576)
chr3 (42-106)||(29907639-29907703)
chr3 (42-106)||(29948805-29948869)
chr3 (42-106)||(29997959-29998023)
chr3 (15-106)||(14152360-14152451)
chr3 (14-84)||(12917264-12917336)
chr3 (55-155)||(22758835-22758935)
chr3 (54-122)||(3263963-3264031)
chr3 (16-84)||(3527117-3527187)
chr3 (27-78)||(6820192-6820243)
chr3 (96-162)||(31223887-31223952)
chr3 (54-106)||(5215647-5215699)
chr3 (129-176)||(22146832-22146880)
chr3 (58-106)||(22841283-22841331)
[»] chr8 (59 HSPs)
chr8 (15-212)||(19140659-19140855)
chr8 (23-219)||(42817876-42818072)
chr8 (29-219)||(39935982-39936175)
chr8 (54-228)||(20083638-20083812)
chr8 (43-219)||(5761421-5761596)
chr8 (64-219)||(5082222-5082377)
chr8 (58-219)||(6573060-6573221)
chr8 (54-219)||(6101753-6101918)
chr8 (58-219)||(37292593-37292753)
chr8 (58-219)||(6202664-6202824)
chr8 (107-228)||(20178581-20178704)
chr8 (54-208)||(20397510-20397656)
chr8 (54-214)||(22532132-22532292)
chr8 (54-214)||(22536817-22536977)
chr8 (54-222)||(31722493-31722661)
chr8 (15-106)||(18761448-18761539)
chr8 (43-176)||(20022029-20022155)
chr8 (54-176)||(45469219-45469342)
chr8 (54-158)||(17906849-17906953)
chr8 (58-214)||(39694281-39694437)
chr8 (54-176)||(22317911-22318033)
chr8 (54-166)||(36727038-36727151)
chr8 (43-106)||(4380606-4380669)
chr8 (15-94)||(23943787-23943866)
chr8 (54-166)||(23899987-23900100)
chr8 (14-106)||(22208269-22208361)
chr8 (23-101)||(22258275-22258353)
chr8 (15-84)||(21579167-21579236)
chr8 (15-84)||(36306019-36306088)
chr8 (54-157)||(19700109-19700213)
chr8 (54-157)||(23948211-23948315)
chr8 (53-158)||(17218649-17218755)
chr8 (54-135)||(23419411-23419493)
chr8 (13-74)||(12037123-12037184)
chr8 (15-84)||(18834444-18834513)
chr8 (54-121)||(22583660-22583727)
chr8 (54-121)||(23889784-23889851)
chr8 (53-124)||(36305837-36305908)
chr8 (55-176)||(42265510-42265631)
chr8 (54-130)||(22254741-22254818)
chr8 (14-84)||(22345186-22345258)
chr8 (14-84)||(22356846-22356918)
chr8 (23-84)||(29762837-29762898)
chr8 (54-106)||(26454708-26454760)
chr8 (54-91)||(17158963-17159000)
chr8 (54-91)||(23479097-23479134)
chr8 (54-90)||(19880838-19880874)
chr8 (58-98)||(34758875-34758915)
chr8 (43-102)||(21514695-21514754)
chr8 (104-176)||(3273819-3273892)
chr8 (54-106)||(12577880-12577931)
chr8 (54-102)||(22610267-22610315)
chr8 (14-83)||(23884192-23884263)
chr8 (58-106)||(25657518-25657566)
chr8 (43-115)||(36732401-36732473)
chr8 (54-91)||(16198851-16198888)
chr8 (14-84)||(20879494-20879566)
chr8 (54-106)||(18816295-18816347)
chr8 (58-106)||(22483786-22483834)
[»] scaffold0001 (3 HSPs)
scaffold0001 (15-219)||(31881-32085)
scaffold0001 (15-219)||(37188-37392)
scaffold0001 (15-219)||(77574-77778)
[»] scaffold1633 (1 HSPs)
scaffold1633 (15-219)||(1092-1296)
[»] scaffold0407 (1 HSPs)
scaffold0407 (31-219)||(11251-11439)
[»] scaffold0077 (2 HSPs)
scaffold0077 (15-219)||(34226-34430)
scaffold0077 (54-135)||(5921-6002)
[»] scaffold0080 (1 HSPs)
scaffold0080 (15-219)||(21754-21958)
[»] scaffold0111 (2 HSPs)
scaffold0111 (27-214)||(12506-12693)
scaffold0111 (57-219)||(5270-5432)
[»] scaffold1941 (1 HSPs)
scaffold1941 (54-219)||(25-190)
[»] chr5 (32 HSPs)
chr5 (27-219)||(21300017-21300209)
chr5 (58-205)||(7484903-7485050)
chr5 (23-219)||(19921525-19921727)
chr5 (54-215)||(20566445-20566598)
chr5 (45-203)||(31622028-31622178)
chr5 (49-178)||(36508628-36508757)
chr5 (54-172)||(21617928-21618047)
chr5 (54-178)||(31456888-31457012)
chr5 (23-106)||(23199176-23199259)
chr5 (53-172)||(22111762-22111881)
chr5 (54-158)||(20469176-20469281)
chr5 (15-84)||(21398605-21398674)
chr5 (54-106)||(6551290-6551342)
chr5 (54-157)||(10954038-10954141)
chr5 (54-162)||(10774664-10774771)
chr5 (43-177)||(17876132-17876266)
chr5 (53-106)||(266038-266091)
chr5 (57-106)||(30616614-30616663)
chr5 (54-106)||(17011728-17011780)
chr5 (54-176)||(21405628-21405751)
chr5 (94-174)||(31251931-31252011)
chr5 (54-135)||(25249828-25249910)
chr5 (54-135)||(25313612-25313694)
chr5 (22-84)||(32607284-32607346)
chr5 (54-106)||(18744874-18744926)
chr5 (22-79)||(8503856-8503913)
chr5 (158-207)||(22111715-22111764)
chr5 (14-102)||(16063755-16063845)
chr5 (139-178)||(30138059-30138098)
chr5 (53-102)||(1627066-1627115)
chr5 (43-84)||(14025796-14025837)
chr5 (54-106)||(29448840-29448892)
[»] scaffold1766 (1 HSPs)
scaffold1766 (54-219)||(696-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (54-219)||(3069-3234)
scaffold0241 (112-219)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (54-219)||(13392-13557)
[»] scaffold0020 (2 HSPs)
scaffold0020 (54-219)||(168999-169164)
scaffold0020 (50-219)||(143498-143667)
[»] scaffold0334 (1 HSPs)
scaffold0334 (54-219)||(405-570)
[»] scaffold0026 (1 HSPs)
scaffold0026 (54-219)||(146610-146775)
[»] scaffold0632 (1 HSPs)
scaffold0632 (54-219)||(1052-1217)
[»] scaffold0004 (6 HSPs)
scaffold0004 (43-219)||(328277-328455)
scaffold0004 (53-207)||(75691-75839)
scaffold0004 (53-209)||(72841-72989)
scaffold0004 (53-158)||(110121-110227)
scaffold0004 (14-124)||(73069-73181)
scaffold0004 (42-106)||(66060-66124)
[»] scaffold0036 (1 HSPs)
scaffold0036 (15-167)||(78146-78298)
[»] scaffold0019 (2 HSPs)
scaffold0019 (15-158)||(24092-24235)
scaffold0019 (55-154)||(30023-30122)
[»] scaffold0047 (1 HSPs)
scaffold0047 (15-215)||(78955-79140)
[»] scaffold0149 (2 HSPs)
scaffold0149 (54-193)||(29573-29711)
scaffold0149 (54-178)||(21539-21663)
[»] scaffold0285 (1 HSPs)
scaffold0285 (41-215)||(19652-19818)
[»] scaffold0113 (1 HSPs)
scaffold0113 (54-180)||(35418-35542)
[»] scaffold0956 (1 HSPs)
scaffold0956 (15-137)||(2524-2646)
[»] scaffold0037 (3 HSPs)
scaffold0037 (54-214)||(112966-113127)
scaffold0037 (53-172)||(81501-81620)
scaffold0037 (54-214)||(117807-117960)
[»] scaffold0112 (1 HSPs)
scaffold0112 (54-215)||(2787-2941)
[»] scaffold0230 (1 HSPs)
scaffold0230 (57-178)||(6688-6809)
[»] scaffold0083 (3 HSPs)
scaffold0083 (54-214)||(10755-10913)
scaffold0083 (54-129)||(5045-5120)
scaffold0083 (54-106)||(1937-1989)
[»] scaffold0174 (6 HSPs)
scaffold0174 (58-209)||(5167-5310)
scaffold0174 (58-209)||(11287-11430)
scaffold0174 (53-208)||(19605-19759)
scaffold0174 (14-106)||(5454-5546)
scaffold0174 (14-106)||(11616-11708)
scaffold0174 (14-84)||(19878-19948)
[»] scaffold0628 (1 HSPs)
scaffold0628 (43-222)||(1047-1226)
[»] scaffold0213 (1 HSPs)
scaffold0213 (15-106)||(19207-19298)
[»] scaffold0156 (1 HSPs)
scaffold0156 (60-178)||(16532-16650)
[»] scaffold0802 (1 HSPs)
scaffold0802 (54-174)||(4709-4830)
[»] scaffold0100 (1 HSPs)
scaffold0100 (58-205)||(26638-26779)
[»] scaffold0203 (1 HSPs)
scaffold0203 (27-106)||(17913-17992)
[»] scaffold0008 (1 HSPs)
scaffold0008 (54-175)||(135504-135625)
[»] scaffold0379 (2 HSPs)
scaffold0379 (53-171)||(10741-10851)
scaffold0379 (15-84)||(10969-11038)
[»] scaffold0175 (2 HSPs)
scaffold0175 (54-176)||(8571-8694)
scaffold0175 (97-209)||(18744-18856)
[»] scaffold0040 (1 HSPs)
scaffold0040 (54-178)||(106051-106175)
[»] scaffold0032 (1 HSPs)
scaffold0032 (27-106)||(61821-61900)
[»] scaffold0028 (1 HSPs)
scaffold0028 (55-176)||(3053-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (53-176)||(2020-2143)
[»] scaffold0123 (1 HSPs)
scaffold0123 (54-176)||(7205-7329)
[»] scaffold0431 (1 HSPs)
scaffold0431 (23-106)||(5633-5716)
[»] scaffold0251 (1 HSPs)
scaffold0251 (54-171)||(20086-20202)
[»] scaffold0056 (2 HSPs)
scaffold0056 (54-166)||(67060-67173)
scaffold0056 (43-106)||(18275-18338)
[»] scaffold0075 (1 HSPs)
scaffold0075 (54-157)||(60843-60947)
[»] scaffold0010 (1 HSPs)
scaffold0010 (54-157)||(126305-126407)
[»] scaffold0220 (3 HSPs)
scaffold0220 (54-155)||(19905-20006)
scaffold0220 (143-176)||(13878-13911)
scaffold0220 (49-106)||(13949-14006)
[»] scaffold1256 (1 HSPs)
scaffold1256 (43-106)||(2189-2252)
[»] scaffold0853 (1 HSPs)
scaffold0853 (23-106)||(2423-2506)
[»] scaffold0256 (1 HSPs)
scaffold0256 (62-124)||(1855-1917)
[»] scaffold0162 (1 HSPs)
scaffold0162 (15-84)||(23853-23922)
[»] scaffold0041 (1 HSPs)
scaffold0041 (59-108)||(5712-5761)
[»] scaffold0671 (1 HSPs)
scaffold0671 (54-157)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (54-157)||(4333-4437)
[»] scaffold0071 (1 HSPs)
scaffold0071 (54-106)||(15272-15324)
[»] scaffold0002 (1 HSPs)
scaffold0002 (54-157)||(398510-398614)
[»] scaffold0516 (1 HSPs)
scaffold0516 (43-102)||(5294-5353)
[»] scaffold0003 (1 HSPs)
scaffold0003 (58-157)||(96347-96446)
[»] scaffold0261 (1 HSPs)
scaffold0261 (141-207)||(6620-6686)
[»] scaffold0819 (1 HSPs)
scaffold0819 (54-162)||(5311-5418)
[»] scaffold0328 (2 HSPs)
scaffold0328 (27-84)||(18613-18670)
scaffold0328 (143-176)||(18731-18764)
[»] scaffold0577 (1 HSPs)
scaffold0577 (54-162)||(9004-9111)
[»] scaffold0439 (1 HSPs)
scaffold0439 (98-177)||(12323-12403)
[»] scaffold0065 (1 HSPs)
scaffold0065 (54-157)||(52544-52648)
[»] scaffold0042 (1 HSPs)
scaffold0042 (54-153)||(29340-29440)
[»] scaffold0007 (2 HSPs)
scaffold0007 (54-181)||(158822-158949)
scaffold0007 (54-102)||(18701-18749)
[»] scaffold0859 (1 HSPs)
scaffold0859 (69-176)||(4612-4718)
[»] scaffold0676 (1 HSPs)
scaffold0676 (27-106)||(2881-2960)
[»] scaffold0125 (1 HSPs)
scaffold0125 (15-74)||(28583-28642)
[»] scaffold0107 (1 HSPs)
scaffold0107 (27-74)||(13525-13572)
[»] scaffold0180 (1 HSPs)
scaffold0180 (44-176)||(28319-28451)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-84)||(127301-127373)
[»] scaffold0515 (1 HSPs)
scaffold0515 (54-106)||(5029-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (54-106)||(8960-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (54-106)||(5029-5081)
[»] scaffold0151 (1 HSPs)
scaffold0151 (54-169)||(31046-31160)
[»] scaffold0138 (2 HSPs)
scaffold0138 (54-106)||(21097-21149)
scaffold0138 (54-106)||(34112-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (54-106)||(69853-69905)
[»] scaffold0601 (1 HSPs)
scaffold0601 (53-91)||(195-233)
[»] scaffold0878 (1 HSPs)
scaffold0878 (16-106)||(3383-3474)
[»] scaffold0414 (1 HSPs)
scaffold0414 (15-84)||(11121-11190)
[»] scaffold0017 (1 HSPs)
scaffold0017 (57-106)||(26727-26776)
[»] scaffold0061 (2 HSPs)
scaffold0061 (42-106)||(14574-14638)
scaffold0061 (42-106)||(23632-23696)
[»] scaffold0034 (2 HSPs)
scaffold0034 (54-106)||(29216-29268)
scaffold0034 (55-155)||(120905-121005)
[»] scaffold0116 (1 HSPs)
scaffold0116 (54-176)||(35464-35586)
[»] scaffold0505 (1 HSPs)
scaffold0505 (42-84)||(4958-5000)
[»] scaffold0411 (1 HSPs)
scaffold0411 (54-142)||(13417-13505)
[»] scaffold0369 (1 HSPs)
scaffold0369 (14-76)||(15575-15638)
[»] scaffold0058 (1 HSPs)
scaffold0058 (58-91)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (54-91)||(21777-21814)
[»] scaffold0625 (1 HSPs)
scaffold0625 (54-106)||(5861-5913)
[»] scaffold0308 (1 HSPs)
scaffold0308 (104-176)||(13370-13442)
[»] scaffold0730 (1 HSPs)
scaffold0730 (24-124)||(6473-6575)
[»] scaffold0205 (1 HSPs)
scaffold0205 (55-153)||(30607-30705)
[»] scaffold0070 (1 HSPs)
scaffold0070 (27-66)||(11193-11232)
[»] scaffold0043 (2 HSPs)
scaffold0043 (53-155)||(27928-28030)
scaffold0043 (53-129)||(42811-42888)
[»] scaffold1128 (1 HSPs)
scaffold1128 (94-155)||(448-510)
[»] scaffold0371 (1 HSPs)
scaffold0371 (15-84)||(10407-10476)
[»] scaffold0148 (1 HSPs)
scaffold0148 (22-84)||(8866-8930)
[»] scaffold1186 (1 HSPs)
scaffold1186 (54-106)||(2020-2072)
[»] scaffold0594 (1 HSPs)
scaffold0594 (54-106)||(2247-2299)
[»] scaffold0462 (1 HSPs)
scaffold0462 (54-106)||(11223-11275)
[»] scaffold0104 (2 HSPs)
scaffold0104 (54-106)||(14957-15009)
scaffold0104 (54-106)||(16977-17029)
[»] scaffold0005 (1 HSPs)
scaffold0005 (54-106)||(186196-186248)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 12465221 - 12465425
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465221 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 12465320  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465321 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 12465420  T
Q  215 gatgt 219  Q
    |||||    
T  12465421 gatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 12372363 - 12372161
Alignment:
Q  17 gaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 116  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372363 gaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 12372264  T
Q  117 catgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 216  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12372263 catgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 12372164  T
Q  217 tgt 219  Q
    |||    
T  12372163 tgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 13147433 - 13147637
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13147433 gagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagttt 13147532  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  13147533 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaagt 13147632  T
Q  215 gatgt 219  Q
    |||||    
T  13147633 gatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 12322898 - 12323095
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12322898 ggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 12322997  T
Q  122 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12322998 tgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 8851128 - 8851324
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8851128 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 8851227  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 32433550 - 32433754
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32433550 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagttt 32433649  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |    
T  32433650 agcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtagaagt 32433749  T
Q  215 gatgt 219  Q
    |||||    
T  32433750 gatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 11067559 - 11067355
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11067559 gagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagttt 11067460  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||| |    
T  11067459 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtggagaagt 11067360  T
Q  215 gatgt 219  Q
    |||||    
T  11067359 gatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 12127123 - 12127328
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 113  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12127123 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 12127222  T
Q  114 tagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaat 213  Q
    || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12127223 taacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaat 12127322  T
Q  214 tgatgt 219  Q
    | ||||    
T  12127323 ttatgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 16999527 - 16999320
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattcta--agttgtataattctgaaattgagt 112  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||    
T  16999527 gagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagt 16999428  T
Q  113 ttagcatgttgtaggttgtagttatgggaattt-gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 211  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16999427 ttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtaga 16999328  T
Q  212 attgatgt 219  Q
    ||||||||    
T  16999327 attgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 20620339 - 20620173
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 148  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  149 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 14180398 - 14180563
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 20586404 - 20586239
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 46386088 - 46386253
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  46386088 taagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaatta 46386187  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386188 ggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 24269947 - 24270112
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||   | || ||| ||||||||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 47974781 - 47974944
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||| ||||||||| | |||   |||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||    
T  47974781 gagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggattt 47974880  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 178  Q
    | || || ||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  47974881 aacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 44374935 - 44374833
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 113  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  44374935 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtt 44374836  T
Q  114 tag 116  Q
    |||    
T  44374835 tag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 44383800 - 44383698
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 113  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  44383800 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtt 44383701  T
Q  114 tag 116  Q
    |||    
T  44383700 tag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 33002211 - 33002053
Alignment:
Q  48 ctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 147  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  |||| |       ||||||||||| |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgg 33002120  T
Q  148 gaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||| || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 15095637 - 15095759
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    |||||| |||||||||||| ||||    
T  15095736 aggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| || ||||||| |||||||| ||||||||||||||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  153 aggttttgaagttgtaattggttg 176  Q
     |||   |||||||||||||||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| || |||||| ||||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |||| || |||||||||||||||| ||| ||||||||||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 43276705 - 43276796
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  43276705 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||| ||| ||||| |||||| |||| ||||||||||||| |||| || |||||||||||||||| | |||||||| ||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  154 ggttttgaagttgtaattggttg 176  Q
    ||||| |||||||||||||||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 25943171 - 25943041
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||| ||||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||| | ||||   | || |||||||| ||||    
T  25943171 ttaatgtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaatt 25943072  T
Q  153 aggttttgaagttgtaattggttgttaatag 183  Q
    |||||||||||| ||||||||||||||||||    
T  25943071 aggttttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 12754574 - 12754716
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||| ||   || |||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||  |||    
T  12754574 gagaagaggagcaatcttgtagagttcatcgat-taacctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggattt 12754672  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttt 158  Q
    | || || |||||||||||| |||| ||||||||||||| ||||    
T  12754673 aacaggtggtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 15140265 - 15140143
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    ||||||  ||||||||||||||||    
T  15140166 aggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |||| ||||| |||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || |||| || |||| || ||||||| |||||||| ||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  153 ag 154  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||| ||||||||||||| ||||| |||||||  ||||||||||| |||  |||  |||||| |||||||||||| ||| ||||||||||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    ||| || |||||||||||||||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 15624070 - 15623950
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||| |||  ||||||||||| |||| ||||||||||||| ||||  | ||||||| |||||||| |||||||||| ||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatta 15623972  T
Q  154 ggttttgaagttgtaattggtt 175  Q
    ||||| | ||||||||||||||    
T  15623971 ggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 19195691 - 19195611
Alignment:
Q  26 caatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 18074619 - 18074693
Alignment:
Q  26 caatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 100  Q
    |||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  51 atttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 124  Q
    |||||| |||||||||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  96 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 176  Q
    ||||||||||||||| |||| || ||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 19283140 - 19283056
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||   |  |||||||||||||||||    
T  19283140 ggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaa 19283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 4690652 - 4690715
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4690652 atcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 12557973 - 12557853
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||| ||| ||||||| ||| |||||||||||| |||| ||||| ||| |||| |||| || |||||||||||||||| ||||||||||| ||||    
T  12557973 taagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaatt 12557875  T
Q  153 aggttttgaagttgtaattggt 174  Q
    |||||| ||||||| |||||||    
T  12557874 aggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| || | ||||| |||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  153 aggttt 158  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 14160819 - 14160886
Alignment:
Q  17 gaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| ||||    
T  14160819 gaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 38299842 - 38299748
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  38299842 agagaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 58374 - 58443
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| ||| |||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||    
T  58374 gagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 11054765 - 11054642
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 151  Q
    ||||||||||||||||||||| |||  | ||||||||| || | ||||||||| |||| |||| || ||||||||||||| || |||||||||||| |||    
T  11054765 taaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaat 11054667  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| ||  ||||||||||||||||    
T  11054666 tagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 36704566 - 36704673
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg-gaatttgg 147  Q
    |||| ||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||   |||| ||||||||| | ||||||| ||| | |||||     
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttggaggatttga 36704665  T
Q  148 gaattagg 155  Q
    ||||||||    
T  36704666 gaattagg 36704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 13744468 - 13744540
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  13744468 agagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 29052182 - 29052234
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  94 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 174  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| | |||||||||||||||||||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 32160161 - 32160252
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||| | |||   |||  ||||||||||||  ||||||||||||||||||||||||  | |||||||||||    
T  32160161 gagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 16250222 - 16250274
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 16550005 - 16550057
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  16550005 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 16615657 - 16615605
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  16615657 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 18955382 - 18955330
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||||||    
T  18955382 taaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 162
Target Start/End: Original strand, 36685146 - 36685253
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||| || ||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| ||| |||||||||||||    
T  36685146 taaggtaagggtggaaccaaccttcaataattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaatta 36685244  T
Q  154 ggttttgaa 162  Q
    || ||||||    
T  36685245 gggtttgaa 36685253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  176 gttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 43745719 - 43745656
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  ||||||||||||||||||| |||||||||||  | |||||||||||| |||||    
T  43745719 atcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 14156352 - 14156410
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggacta 72  Q
    ||||||| ||||||||||||||||  || || ||||||| |||||||||||||||||||    
T  14156352 agagaagaggagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 25943331 - 25943289
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  25943331 aatcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 13315048 - 13315152
Alignment:
Q  22 ggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcat 119  Q
    ||||||| |||||||||||   ||| ||||||| ||||||||||||| ||||| |||||||||||  |  ||||||| |||||||||  | ||||| |||    
T  13315048 ggagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaacat 13315147  T
Q  120 gttgt 124  Q
    |||||    
T  13315148 gttgt 13315152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 30820151 - 30820243
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 147  Q
    |||||| |||||||||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| |||||||||||    
T  30820151 taaggtgagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagttttgggaatttgg 30820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 37539542 - 37539470
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||| ||||||||||||||||| |||| ||||    
T  37539542 agagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataat 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 3287796 - 3287744
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  || |||||||||||||||||    
T  3287796 taaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 8488094 - 8488142
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||    
T  8488094 taaggtaagggtgggactaactttctctaataatgggttgtataattct 8488142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 8513753 - 8513801
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||    
T  8513753 taaggtaagggtgggactaactttctctaataatgggttgtataattct 8513801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtag 126  Q
    |||||||||||||||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtag 126  Q
    |||||||||||||||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 18990899 - 18990847
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  18990899 taaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 18990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 20252182 - 20252234
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||| |||||| |||||||||||  | ||||||||||||||||||    
T  20252182 taaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 32302278 - 32302177
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||| | |||  |||||||||||  | ||||||||  ||||||  |||| ||||||||||||| ||||| || | |||||||||||    
T  32302278 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatt 32302180  T
Q  153 agg 155  Q
    |||    
T  32302179 agg 32302177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 8930753 - 8930795
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  8930753 aatcatctaatctaaggtaagggtgggactacatttctctaat 8930795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 14259445 - 14259346
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||  | ||||| || ||||||||||||||    
T  14259445 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtag--tttagttttgagaatttgggaatta 14259348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 708429 - 708481
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||||||| |||||||||||  |  |||||||||||||||||    
T  708429 taaggtaggggtgggactagctttctctaataatgggttgtataattctgaaa 708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 15575649 - 15575701
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||||||| |||||||||||  |  |||||||||||||||||    
T  15575649 taaggtaggggtgggactagctttctctaataatgggttgtataattctgaaa 15575701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 18874665 - 18874717
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18874665 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 18874717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 47095504 - 47095452
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||  |  |||| ||||||||||||    
T  47095504 taaggtaagggtgggactagctttctctaataatgggttgaataattctgaaa 47095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 7828063 - 7827859
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7828063 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 7827964  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7827963 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaatt 7827864  T
Q  215 gatgt 219  Q
    |||||    
T  7827863 gatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 23150248 - 23150452
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150248 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 23150347  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  23150348 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaatt 23150447  T
Q  215 gatgt 219  Q
    |||||    
T  23150448 gatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 19655200 - 19655396
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19655200 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 19655299  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 27125446 - 27125642
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  27125446 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgtt 27125545  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 18703659 - 18703451
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18703659 gagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagttt 18703560  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtagaaaatccgttgaatttgtgtag 210  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||    
T  18703559 agaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatag 18703460  T
Q  211 aattgatgt 219  Q
    || ||||||    
T  18703459 aagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 18709594 - 18709386
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18709594 gagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagttt 18709495  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtagaaaatccgttgaatttgtgtag 210  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||    
T  18709494 agaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatag 18709395  T
Q  211 aattgatgt 219  Q
    || ||||||    
T  18709394 aagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 15890712 - 15890877
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 27329981 - 27330131
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  27329981 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27330080  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330081 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 27390721 - 27390871
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  27390721 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27390820  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390821 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 24267900 - 24267801
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 19235175 - 19235015
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| ||||||| | ||||   | || ||||||||| ||||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg-atta 19235077  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 156  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| ||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  157 tttgaagttgtaattggttgtt 178  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 18928733 - 18928614
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  153 aggttttgaagttgtaattg 172  Q
    |||||| |||||||||||||    
T  18928633 aggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 214
Target Start/End: Complemental strand, 28948627 - 28948466
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgta-gttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| |||||| ||| | | ||||||||||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 30673402 - 30673556
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| | ||||        |||||| |||||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatta 30673493  T
Q  154 ggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||| | |||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 19167853 - 19167998
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||| | ||||||| ||||||  || ||||||||||||||| ||||||||||||||||||| |                |||||||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgttg----------------tttgggaatta 19167936  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19167937 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 19401147 - 19401028
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||| ||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  152 taggttttgaagttgtaattg 172  Q
    |||||||  ||||||||||||    
T  19401048 taggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 27572121 - 27572198
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcat-gttgtaggtt 129  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||  |||  || |||||||||||||||| |||| ||||| |||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  153 aggttt 158  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 20410473 - 20410564
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||| | || |||||||||||  |  |||||||||||||||||    
T  20410473 gagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 17318127 - 17318184
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggacta 72  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17318127 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 24550168 - 24550271
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||  |||| ||||| |||||||| ||||||||||||||  |||| ||||||||||| ||||||| |||  ||||  ||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 24550267  T
Q  154 ggtt 157  Q
    ||||    
T  24550268 ggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 19825446 - 19825538
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||||||| ||||| |||||||||||  |  |||| ||||||||||||    
T  19825446 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaa 19825538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 23501724 - 23501601
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaat-tgagtttagcatgttgtaggttgtagttatgggaa-tttgggaat 151  Q
    ||||||||||||| ||||||| |||  ||||||||| | || |||||||||||  ||| |||| || |||||||||||||||| | |||| |||||||||    
T  23501724 taaggtaagggtgagactaaccttcaataattctaaat-gtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaat 23501626  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    ||||||| |||||||||||| ||||    
T  23501625 taggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 25922093 - 25922033
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 74  Q
    ||||||| |||||||||| |||||| || |||||||||| |||||||||||||||||||||    
T  25922093 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10446312 - 10446239
Alignment:
Q  13 cagagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||| ||||||| | |||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  10446312 cagagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 15173453 - 15173505
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  15173453 taaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataa 98  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 13285842 - 13285748
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||| |||||||||||   || |||||||| ||||||||||||||||||||| |||| ||||  | ||||  ||||||||||||    
T  13285842 agagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaa 13285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 18259262 - 18259328
Alignment:
Q  144 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 209  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259262 ttgggaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 19772667 - 19772767
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | ||||||||||||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 19772765  T
Q  154 gg 155  Q
    ||    
T  19772766 gg 19772767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 23658146 - 23658089
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||| ||||||||||||||||||| ||||| |||||  || |||||||||||||||||    
T  23658146 taatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 15900654 - 15900706
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||| ||||||||||||||||||||  | |||||||||||    
T  15900654 taaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaa 15900706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 21683064 - 21683127
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  ||||||||||||||||||| |||||||||||  |  |||||||||||| ||||    
T  21683064 atcatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaa 21683127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 31734798 - 31734729
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||| | |||   |||  ||||||||||||||||||||| |||| ||||    
T  31734798 gagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 31734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 29045335 - 29045271
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||| | ||||||||||||| ||||| |||||||||||  |  ||||||||||| |||||    
T  29045335 aatcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaa 29045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 34140415 - 34140474
Alignment:
Q  15 gagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggacta 72  Q
    |||||| ||||||| ||||||||||    ||||||||||| |||||||||||||||||||    
T  34140415 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggacta 34140474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 34153031 - 34153090
Alignment:
Q  15 gagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggacta 72  Q
    |||||| ||||||| ||||||||||    ||||||||||| |||||||||||||||||||    
T  34153031 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggacta 34153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 25091744 - 25091540
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091744 gagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 25091645  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091644 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 25091545  T
Q  215 gatgt 219  Q
    |||||    
T  25091544 gatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 53630435 - 53630639
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630435 gagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 53630534  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53630535 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaatt 53630634  T
Q  215 gatgt 219  Q
    |||||    
T  53630635 gatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 10356397 - 10356601
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||| | ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10356397 gagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagttt 10356496  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10356497 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaatt 10356596  T
Q  215 gatgt 219  Q
    |||||    
T  10356597 gatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 11426017 - 11425825
Alignment:
Q  32 tgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 131  Q
    ||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  132 agttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatc 224  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 42875888 - 42875684
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||| ||||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42875888 gagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagttt 42875789  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42875788 agcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaatt 42875689  T
Q  215 gatgt 219  Q
    |||||    
T  42875688 gatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 19610415 - 19610211
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19610415 gagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagttt 19610316  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19610315 agcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaatt 19610216  T
Q  215 gatgt 219  Q
    |||||    
T  19610215 gatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 16998598 - 16998412
Alignment:
Q  33 gtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgta 132  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16998598 gtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgta 16998499  T
Q  133 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  16998498 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 15115274 - 15115109
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 37019722 - 37019561
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 9924206 - 9924085
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  153 aggttttgaagttgtaattggt 174  Q
    |||||| |||||||||||||||    
T  9924106 aggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 14549812 - 14549695
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  154 ggttttgaagttgtaatt 171  Q
    ||||| ||||||||||||    
T  14549712 ggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  154 ggttttgaagttgt 167  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 151  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||  |||  |||| |||||||||||||| |||||||||||| |||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| || |||||||||||||||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 11478653 - 11478772
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||| |||| || ||||||| ||| |||| ||||||||||| ||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  153 aggttttgaagttgtaattg 172  Q
    |||||| ||| |||||||||    
T  11478753 aggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 10694214 - 10694297
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  10694214 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 10907980 - 10908063
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  10907980 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 12424259 - 12424342
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 21248 - 21144
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| |||||    
T  21248 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 21149  T
Q  153 aggtt 157  Q
    |||||    
T  21148 aggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 25513942 - 25513851
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||||  |||||||||| |||||||| |||||||||| |||||||||||  | ||||||||||||||||||    
T  25513942 gagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  141 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 207  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 40230397 - 40230328
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  40230397 gagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||||||||| |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 9639101 - 9639010
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||| ||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||||  | |||||| |||||||||||    
T  9639101 gagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 19022435 - 19022366
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  19022435 gagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 33186987 - 33186903
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||  |  |||||||||||||||||    
T  33186987 ggagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 2424376 - 2424439
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2424376 atcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 35811375 - 35811428
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 14187010 - 14186955
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattga 110  Q
    |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  14187010 taaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 15009015 - 15008963
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

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Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 21062693 - 21062593
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| | || ||||||  |||| || || ||||||||||||| || | ||||| |||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaatt 21062594  T
Q  153 a 153  Q
    |    
T  21062593 a 21062593  T

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Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 10273477 - 10273405
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   |||| |||||| ||||||||||||||||||| |||||||||||    
T  10273477 agagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaat 10273405  T

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Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 33243267 - 33243324
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaat 33243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 16296990 - 16296938
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  16296990 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

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Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 40620584 - 40620532
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  40620584 taaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 13165226 - 13165154
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| ||||||||||||||  ||| | ||| ||||||||||||||||||||| |||| ||||    
T  13165226 agagaagaggagcaaacttgtagagtccaaattcaaccaatctaaggtaagggtgggactaaccttctttaat 13165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 27028708 - 27028642
Alignment:
Q  144 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 209  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  27028708 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 27028642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 32466194 - 32466244
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga 104  Q
    ||||||||||||| ||||||  |||| |||||||||||||| |||||||||    
T  32466194 taaggtaagggtgagactaatcttctttaattctaagttgtgtaattctga 32466244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 9638972 - 9638939
Alignment:
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||| |||||||||||||||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttg 9638939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 14186104 - 14186067
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagt 91  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  14186104 taaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 14631187 - 14631135
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14631187 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14631135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 19676802 - 19676598
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676802 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 19676703  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676702 agcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 19676603  T
Q  215 gatgt 219  Q
    |||||    
T  19676602 gatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21046010 - 21046214
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046010 gagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 21046109  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046110 agcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 21046209  T
Q  215 gatgt 219  Q
    |||||    
T  21046210 gatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16058387 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 20633600 - 20633799
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20633600 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgtt 20633699  T
Q  123 gtaggttgtag---ttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||    
T  20633700 gtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 42913101 - 42912936
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 214
Target Start/End: Complemental strand, 51324556 - 51324396
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| |||||| ||||||||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| || || |||| |||||||| ||| |||||| ||||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
     |||| |||||||||||||||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| ||||||||||||||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  153 aggttt 158  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 21168985 - 21168825
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||| | ||||||||||||||| || ||||||||||||| ||||||||||||||||||||| | ||||   | || |||||||||||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||| | ||  || ||| ||||||||||||||||||| ||||||||||||| |||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| || ||||| | | |||||||||||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
    ||||| ||| |||||||||||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| ||||||||||||||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    | |||| || ||||||||||||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 22350796 - 22350646
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatg 120  Q
    |||||||||||||||||||| ||||    || ||||||||||||||||||||| |||  ||||||| |||  ||| ||||||||| |||| |||| || |    
T  22350796 ggagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaag 22350702  T
Q  121 ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 176  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||| || ||||||    
T  22350701 ttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||| || | ||||| |||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  153 aggtt 157  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 4595853 - 4595995
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||||| |||| || |||| || |||||||||||||||        ||||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tttgggaatt 4595944  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 203  Q
    || ||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  4595945 agatttagaagttgtaattggttgatttaagagtagataatccgatgaatt 4595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 12710958 - 12710867
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||| | |||||||| |||||||||||  |  |||||||||||||||||    
T  12710958 gagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 28476695 - 28476786
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||| |||||||  ||||||||| |||||||||||||||||||  ||||||||||  | ||||||||||||||||||    
T  28476695 gagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 20588729 - 20588660
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||    
T  20588729 gagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 20593267 - 20593198
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||    
T  20593267 gagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 51336531 - 51336479
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 8306698 - 8306588
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 113  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||| ||||||||| |||||||||||  |  ||||||||||||| |||  | |||    
T  8306698 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtt 8306599  T
Q  114 tagcatgttgt 124  Q
    || ||||||||    
T  8306598 taacatgttgt 8306588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 44822020 - 44822145
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||||||||| ||||||||||| |||  ||||||| | || ||| ||| ||||| |||  |||| || || ||||||||||||| ||| |||||||||||    
T  44822020 ttaaggtaagagtgggactaaccttcaataattctga-ttatatgattatgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaat 44822118  T
Q  152 taggttttgaagttgtaattggttgtt 178  Q
    ||||||| |||||||||||||||||||    
T  44822119 taggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 41225415 - 41225484
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||| ||||    
T  41225415 gagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 41226668 - 41226737
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||| ||||    
T  41226668 gagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 12327743 - 12327795
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 45499446 - 45499374
Alignment:
Q  51 atttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 124  Q
    |||||| |||||||||| | ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  45499446 atttaacgtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 29763632 - 29763684
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 45755572 - 45755468
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||| |||| ||||| |||||| ||| |||||| ||| ||  |||| || |||||||||||||||| || ||||||| |||||    
T  45755572 taaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatt 45755473  T
Q  153 aggtt 157  Q
    |||||    
T  45755472 aggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 46197745 - 46197797
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 50001528 - 50001476
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  50001528 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 17901753 - 17901846
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||| ||| ||||||||  ||||||||| | ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  17901753 agagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 17901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 22145665 - 22145718
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||  |  ||||| |||||||||||    
T  22145665 ttaaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaa 22145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 34392853 - 34392790
Alignment:
Q  23 gagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||||||||||||||||  ||| | ||| ||||||||||||| ||||| |||||||||||    
T  34392853 gagcaatcttgtagagtccaaattcaaccaatctaaggtaagggtgtgactagctttctctaat 34392790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 6834269 - 6834176
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| ||||||| ||| ||||||||  ||||||||| | ||||| |||||||  |||| |||||||||||  | ||||||||||||||||||    
T  6834269 agagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaa 6834176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 11946453 - 11946391
Alignment:
Q  94 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 155  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 11946391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 8276079 - 8276112
Alignment:
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||| |||||||||||||||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttg 8276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 38056667 - 38056724
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||| ||||||||||||||||||| ||||||||| |  |  |||||||||||||||||    
T  38056667 taatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaa 38056724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 38056762 - 38056795
Alignment:
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||| |||||||||||||||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttg 38056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 45499635 - 45499564
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| ||| ||||||||  |||||| |||| ||||||||||||| ||||| |||||||||||    
T  45499635 agagaagaggagcaagctt-tagagtccggaatcatataatctaaggtaagggtgagactagctttctctaat 45499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 635004 - 635052
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    ||||||||||||| ||||| |||||||||||  || |||||||||||||    
T  635004 taaggtaagggtgagactagctttctctaataataggttgtataattct 635052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 7703188 - 7703144
Alignment:
Q  40 ccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| | ||| ||||||||||||||||||| |||||||||||    
T  7703188 ccaatcaaccaatctaaggtaagggtgggactagctttctctaat 7703144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 14801384 - 14801337
Alignment:
Q  112 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 159  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14801384 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 14810258 - 14810211
Alignment:
Q  112 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 159  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14810258 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 16401967 - 16401897
Alignment:
Q  50 aatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||||||||| |||||||||  |  ||| |||||||||||||| | ||||| ||||||    
T  16401967 aatttaaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaacatgtt 16401897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 24727419 - 24727383
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaag 90  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  24727419 taaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 50544924 - 50544872
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  50544924 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 50544872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 5031098 - 5031297
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031098 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 5031197  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 24780801 - 24781005
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780801 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 24780900  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24780901 agcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagt 24781000  T
Q  215 gatgt 219  Q
    |||||    
T  24781001 gatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 9976020 - 9975816
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9976020 gagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagttt 9975921  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  9975920 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaatt 9975821  T
Q  215 gatgt 219  Q
    |||||    
T  9975820 gatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 24436739 - 24436535
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24436739 gagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagttt 24436640  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24436639 agcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaatt 24436540  T
Q  215 gatgt 219  Q
    |||||    
T  24436539 gatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 17307578 - 17307373
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 113  Q
    ||||||| |||||||  | |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17307578 agagaagaggagcaaaatcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtt 17307479  T
Q  114 tagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17307478 tagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaat 17307379  T
Q  214 tgatgt 219  Q
    ||||||    
T  17307378 tgatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 24516238 - 24516073
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 22251409 - 22251600
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||||||  ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  22251409 gagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagttt 22251508  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22251509 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 2523708 - 2523912
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2523708 gagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagttt 2523807  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    | |||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  2523808 aacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaatt 2523907  T
Q  215 gatgt 219  Q
    |||||    
T  2523908 gatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 40912372 - 40912207
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 19201189 - 19201365
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaa 142  Q
    |||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19201189 atcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaa 19201288  T
Q  143 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19201289 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  91 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  191 aatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  102 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 201  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  202 tttgtgtagaattgatgt 219  Q
    ||||||||||||||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    |||||| |||||||||||||||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
    ||||| |||||||||||||||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  56 aggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 155  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  156 ttttgaagttgtaattggttgtt 178  Q
    ||| |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 27852748 - 27852605
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatg 120  Q
    |||||| ||||||||||||| ||||    || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |    
T  27852748 ggagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaag 27852653  T
Q  121 ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 168  Q
    ||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  27852652 ttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgta 125  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  126 ggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 178  Q
    |||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgta 125  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  126 ggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 178  Q
    |||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || |||| || |||||||||||||||| | |||||||| |||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    |||||| |||||||||||||||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||| |||| ||||||| |||||||||||||||| ||||||||||| ||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  153 ag 154  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 25046170 - 25046066
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||| ||||||| || | ||||  |||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 25046071  T
Q  153 aggtt 157  Q
    |||||    
T  25046070 aggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 22260090 - 22259974
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||| ||| ||||||||||| ||||||||||| || || |||||| ||||||| |||| || |||||||||||||||| | ||||||||||||||    
T  22260090 taaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaatt 22259993  T
Q  153 aggttttgaagttgtaatt 171  Q
    ||| || ||||||||||||    
T  22259992 aggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||  |||| || |||||||||| ||||| || | ||||| |||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  153 aggtt 157  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 149474 - 149549
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||  | ||||||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 21369376 - 21369293
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||   |  |||||||||||||||||    
T  21369376 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaa 21369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14179689 - 14179758
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||| ||||    
T  14179689 gagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 19358943 - 19358820
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 151  Q
    ||||||||||||||||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| |||    
T  19358943 taaggtaagggtgggactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaat 19358845  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| || |||||||||||||||||    
T  19358844 tagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 36841318 - 36841267
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 66  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36841318 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 18390229 - 18390326
Alignment:
Q  69 actaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttg 166  Q
    |||||||||||||||||||||||  |||||||||| |||| || |||| || | |||| ||||||||| ||||||||||||||||||| || |||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14183427 - 14183496
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||| ||||||||| || | ||| |||||||||||||||||||||||||||||||| |||| ||||    
T  14183427 gagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 21080969 - 21081021
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 31521260 - 31521197
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttc 78  Q
    |||||| |||||||||||||| ||||| ||||||||||||| |||||||||| | |||||||||    
T  31521260 gagaagaggagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttc 31521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 177  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 14694383 - 14694276
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga-atttg 146  Q
    |||| ||||||||||||| |||||||||||| |||||||||||  | ||||| || ||||||  |||| |||| |||||||||||||| ||||| |||||    
T  14694383 taatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt-tgggagatttg 14694285  T
Q  147 ggaattagg 155  Q
     ||||||||    
T  14694284 agaattagg 14694276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 20916398 - 20916326
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattct 87  Q
    |||||| |||||||||||||||||  | |||||||||||||| |||||||||| |||||| |||  |||||||    
T  20916398 gagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttcaataattct 20916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 25184241 - 25184189
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  25184241 taaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 18388190 - 18388312
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||| |||  |||| || |||  ||| ||||||||| |||  |||| || |||||||||||||||| ||||||||||||||||    
T  18388190 taaggtaagggtgagactaaccttcaataatcctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 18388288  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    | | || ||||||| || ||||||    
T  18388289 atggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 23801561 - 23801518
Alignment:
Q  41 caatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  23801561 caatcatctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 12626399 - 12626478
Alignment:
Q  27 aatcttgtagagtccaatcat-ctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||| ||||| | ||| ||||||||||||||||||||| |||  ||||  |||| |||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaaccttcattaatcataag-tgtataattctgaaa 12626478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 18357975 - 18358019
Alignment:
Q  62 gggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||  | |||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaa 18358019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 21315476 - 21315528
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  21315476 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 21335266 - 21335318
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  21335266 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 21915672 - 21915624
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21915672 gtaagggtgtgactaactttctctaattctaagtattttaattctgaaa 21915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 23610687 - 23610626
Alignment:
Q  45 catctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||  ||||||||||||||||||| |||||||||||  |  ||||||||||| |||||    
T  23610687 catctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaa 23610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 4675 - 4879
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4675 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagttt 4774  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4775 agcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagt 4874  T
Q  215 gatgt 219  Q
    |||||    
T  4875 gatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 5821 - 5941
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaattagg 155  Q
    ||||| ||| |||||||||||  |||||||||||||| |||||||| ||||||  |||  || ||||| |||||||||| |  ||||||||  |||||||    
T  5821 gtaagtgtgagactaactttccttaattctaagttgtgtaattctgaaaattggatttgacaggttgtgggttgtagttttcagaatttggaaaattagg 5920  T
Q  156 ttttgaagttgtaattggttg 176  Q
     || ||||||| |||||||||    
T  5921 gttagaagttgaaattggttg 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 429 - 633
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  429 gagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 528  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  529 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaatt 628  T
Q  215 gatgt 219  Q
    |||||    
T  629 gatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 58837 - 58633
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  58837 gagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagttt 58738  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  58737 agcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 58638  T
Q  215 gatgt 219  Q
    |||||    
T  58637 gatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 17045045 - 17044853
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17045045 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17044946  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17044945 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 22306544 - 22306736
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306544 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 22306643  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 207  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306644 agcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 17047217 - 17047013
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17047217 gagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 17047118  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17047117 agcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaatt 17047018  T
Q  215 gatgt 219  Q
    |||||    
T  17047017 gatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 22 - 228
Target Start/End: Complemental strand, 49900814 - 49900608
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    |||| ||||| |||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49900814 ggagtaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgt 49900715  T
Q  122 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49900714 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttc 49900615  T
Q  222 atctcat 228  Q
    || ||||    
T  49900614 atatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 17518846 - 17519038
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 17533708 - 17533900
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 35354686 - 35354489
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35354686 ggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgt 35354587  T
Q  122 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  35354586 tgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 40808048 - 40807883
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 11259522 - 11259318
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  11259522 gagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaattt 11259423  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |    
T  11259422 agcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtagaagt 11259323  T
Q  215 gatgt 219  Q
    |||||    
T  11259322 gatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 17694158 - 17693954
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17694158 gagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagttt 17694059  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  17694058 agcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaatt 17693959  T
Q  215 gatgt 219  Q
    |||||    
T  17693958 gatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 41172340 - 41172534
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  41172340 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgtt 41172439  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 17539197 - 17538993
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  17539197 gagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgatttt 17539098  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17539097 atcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaatt 17538998  T
Q  215 gatgt 219  Q
    |||||    
T  17538997 gatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 40812885 - 40812720
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812885 taaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40812786  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40812785 ggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 44274470 - 44274305
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
      |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  69 actaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 168  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  169 attggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 15931469 - 15931672
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15931469 gagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagttt 15931567  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| ||||||||||||  || ||||||||||||||||| ||||||||||||||||||||    
T  15931568 agcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaatt 15931667  T
Q  215 gatgt 219  Q
    |||||    
T  15931668 gatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 10563760 - 10563596
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  127 gttgtagttatgggaatttgggaattaggtttt-gaagttgtaattggttgttaatagagtagaaaatccgttgaatt 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | |||||||| |||| | ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 17541525 - 17541423
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17541525 gagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 17541426  T
Q  115 agc 117  Q
    |||    
T  17541425 agc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 19568208 - 19568368
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |   |||| || |||||||||||||||| |||||||||||||||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    || || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  79 tctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaatt 171  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 176
Target Start/End: Complemental strand, 11563788 - 11563654
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga 141  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||  | |||| || |||||||||||||||| |||||    
T  11563788 atcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttggga 11563689  T
Q  142 atttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||||  ||||||||||||||||    
T  11563688 atttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 33565139 - 33565018
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  153 aggttttgaagttgtaattggt 174  Q
    |||||| |||||||||||||||    
T  33565039 aggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 9510916 - 9511076
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| ||||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 9518891 - 9519051
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| ||||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| || | ||||| |||||||||||||||||||| |||| |||  ||||||||||||||||||| ||||||||||| ||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    ||| || |||||||||||||||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 35960928 - 35961049
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||| |||| || ||||||||||| |||| ||| ||||||| ||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  153 aggttttgaagttgtaattggt 174  Q
    |||||| |||||||||||||||    
T  35961028 aggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || |||||| ||||||||| || | ||||| ||||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  154 ggttt 158  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||  |||| || |||| || |||||||||||||||| ||| ||||||||||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  155 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 45530571 - 45530725
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatg 120  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||   |||||||||| | ||| |||||| ||||||| |||| || |    
T  45530571 ggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-tatatgattctgaaaattgaatttaacagg 45530668  T
Q  121 ttgtaggttgtagttatgggaatttg-ggaattaggttttgaagttgtaattggttg 176  Q
    |||| |||||||||| |||||||||| | ||||||| || |||||||||||||||||    
T  45530669 ttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||||||||| ||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| || ||||||||||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||||||  ||||||||||||||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| |||||| ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  161 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||  ||||  | || ||||||||||||| ||| |||||||||||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  154 ggttt 158  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 155  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||||||| |||||||||| ||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  71 taactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aattaggttttgaagttgta 168  Q
    |||| |||| ||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||| |||||||||||| ||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  169 attggttg 176  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 15446868 - 15446920
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 50347594 - 50347656
Alignment:
Q  13 cagagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaact 75  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  50347594 cagagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 14641508 - 14641596
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    ||||||| |||||||||| |||||| || |||||||||| |||||||||||||||| || |||||||||||  |  |||||||||||||    
T  14641508 agagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattct 14641596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 36528919 - 36528851
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||| |||| ||||| ||||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 5200243 - 5200284
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgta 95  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 17325582 - 17325628
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaa 61  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||    
T  17325582 gagaagaggagtaatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 6159484 - 6159427
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||  |||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 22652826 - 22652773
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  22652826 ttaaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50350793 - 50350846
Alignment:
Q  31 ttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  50350793 ttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 14250085 - 14250185
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 156  Q
    |||||| ||||||||||| |||| |||||||||||||| ||||| | ||||||  |||| ||||||||| | ||||||| |||  ||||  |||||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaagaattaggt 14250184  T
Q  157 t 157  Q
    |    
T  14250185 t 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 16979964 - 16979912
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  16979964 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 17208576 - 17208524
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  17208576 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 29907703 - 29907639
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29907703 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 29948869 - 29948805
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29948869 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 29998023 - 29997959
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29998023 aatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 14152360 - 14152451
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||| ||| | |||   |||  ||||||||||||||||||| |||||||||||  | |||||||| |||||||||    
T  14152360 gagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 12917264 - 12917336
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||| |  ||| | ||| |||| ||||||||||||||||||||||||||    
T  12917264 agagaagaggagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 22758835 - 22758935
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | ||||||||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 22758933  T
Q  154 gg 155  Q
    ||    
T  22758934 gg 22758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 3263963 - 3264031
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    |||||||||||| ||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  3263963 taaggtaagggtcggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 3264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 3527117 - 3527187
Alignment:
Q  16 agaagtggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||| ||||||| |||||||||||| |  ||| || || ||||||||||||||||||| |||||||||||    
T  3527117 agaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 6820243 - 6820192
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttc 78  Q
    ||||||||||||||||||||| |||  |||||||||||||  ||||||||||    
T  6820243 aatcttgtagagtccaatcatttaacctaaggtaagggtgatactaactttc 6820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31223887 - 31223952
Alignment:
Q  96 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaa 162  Q
    ||||||||||| ||  |||| || |||||||||||||||| | ||||||||||||||||| ||||||    
T  31223887 taattctgaaactggatttaacaggttgtaggttgtagtt-ttggaatttgggaattagggtttgaa 31223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 5215699 - 5215647
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||| |||| |||||||||||  | |||||||||||| |||||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaa 5215647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  129 tgtagttatgggaatttgggaa-ttaggttttgaagttgtaattggttg 176  Q
    ||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 22841283 - 22841331
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22841283 gtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22841331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 19140855 - 19140659
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19140855 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagttt 19140757  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140756 agcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 42817876 - 42818072
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T
Q  123 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 39935982 - 39936175
Alignment:
Q  29 tcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt---gta 125  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||   |||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgta 39936081  T
Q  126 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39936082 ggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 228  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 5761596 - 5761421
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaa 142  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5761596 atcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaa 5761498  T
Q  143 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5761497 tttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 5082222 - 5082377
Alignment:
Q  64 gtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 163  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  164 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 6101753 - 6101918
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 20178581 - 20178704
Alignment:
Q  107 ttgagtttagca-tgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaattt 204  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  205 gtgtagaattgatgtccatctcat 228  Q
    ||||||||||||||| ||| ||||    
T  20178681 gtgtagaattgatgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||     || || |||||||||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatta 20397600  T
Q  154 ggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 208  Q
    |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 22532132 - 22532292
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| || ||||||||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 22536817 - 22536977
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| || ||||||||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 31722493 - 31722661
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| || |||| || |||| || |||||||||||||||| ||||||||||| ||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 222  Q
     ||||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||||| |||||||    
T  31722593 tggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 18761539 - 18761448
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18761539 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 20022029 - 20022155
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga 141  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||||||||           
T  20022029 atcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt------- 20022121  T
Q  142 atttgggaattaggttttgaagttgtaattggttg 176  Q
     |||||||||||||||| |||||||||||||||||    
T  20022122 -tttgggaattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||| ||||| ||  ||||||||||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    | |||| |||||||||||||||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || |||||||||||||||  |||| ||||| ||||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  154 ggttt 158  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 214
Target Start/End: Original strand, 39694281 - 39694437
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||| | ||||| |||||||||||| |||||||||| ||||||||| ||  |||| || |||||||||||||||| ||||||||||||||||||| |    
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggt 39694380  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    | || ||||||||| |||||    | |||||| |||| |||||||| ||||||||||    
T  39694381 tagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||| ||||||||||||  |||||||||||| ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    |||||| |||||||||||||||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  |||| || |||||||||||||||| | || ||||| |||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 4380606 - 4380669
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380606 atcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 23943787 - 23943866
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 94  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||  || |||||||||||||||||||||    
T  23943787 gagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| ||||| |||||| |||| || |||||||| ||||||| |||| ||||| ||| |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 22208361 - 22208269
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| |||||||||| |||||| || |||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22208361 agagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 22258275 - 22258353
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattc 101  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||  | |||||||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 21579167 - 21579236
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  21579167 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36306088 - 36306019
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  36306088 gagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 19700213 - 19700109
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| | ||| |  |||| ||||||||||||||||||| || | ||||| | |||    
T  19700213 taaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatttgaggatt 19700114  T
Q  153 aggtt 157  Q
    |||||    
T  19700113 aggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||| |||||| |||| |||||||||||||||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| |||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  153 aggtt 157  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 17218755 - 17218649
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgag-tttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    ||||| |||||||||||||||||||||||| ||||||||  ||||||||||||| | || |||||||  ||||||||||| ||| || | ||||| ||||    
T  17218755 ttaagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaat 17218656  T
Q  152 taggttt 158  Q
    |||||||    
T  17218655 taggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 23419493 - 23419411
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 12037123 - 12037184
Alignment:
Q  13 cagagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 74  Q
    |||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  12037123 cagagaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 18834513 - 18834444
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| || |||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||    
T  18834513 gagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 22583660 - 22583727
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||| |||| |||||    
T  22583660 taaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 23889851 - 23889784
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    |||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  23889851 taagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 36305908 - 36305837
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 124  Q
    |||| ||||||||| || ||||||||| ||||| || ||||||||||| |||||||||||||||||||||||    
T  36305908 ttaacgtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 42265510 - 42265631
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||| ||   ||| ||| |||  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  42265510 aaggtaagggtgggactaacctttaataagtctgagta-tatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 42265608  T
Q  154 ggttttgaagttgtaattggttg 176  Q
    || || ||||||| || ||||||    
T  42265609 gggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 22254818 - 22254741
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttg 130  Q
    |||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||    
T  22254818 taaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 22345258 - 22345186
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  22345258 agagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 22356918 - 22356846
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  22356918 agagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 29762837 - 29762898
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||| ||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaat 29762898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 26454760 - 26454708
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagt 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagt 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaag 90  Q
    |||||||||||||||||||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataa 98  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 21514754 - 21514695
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    ||||||||| ||||||||||||||||||||  ||||||||||  | ||||||||||||||    
T  21514754 atcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 3273892 - 3273819
Alignment:
Q  104 aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttg 176  Q
    ||||||| |||| || ||||| |||||||||| |||||||||||| ||||||| || |||||||| ||||||||    
T  3273892 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 12577931 - 12577880
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||| ||||    
T  12577931 taaggtaagggtgggactaactttctctaataat-agttgtataattccgaaa 12577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 22610267 - 22610315
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||||||||||||||||||||||||||||||  | |||||||| |||||    
T  22610267 taaggtaagggtgggactaactttctctaataatgagttgtatgattct 22610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23884263 - 23884192
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaa 83  Q
    ||||||| ||||||| |||||||||||  |  ||||||||| ||||||||||| ||||||| ||||||||||    
T  23884263 agagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaagggcgggactagctttctctaa 23884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 25657518 - 25657566
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||| |||||||||||||||||||||  | |||||||||||    
T  25657518 gtaagggtgggagtaactttctctaattctaagtattttaattctgaaa 25657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 36732401 - 36732473
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 115  Q
    |||||||||  ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||  |||||||    
T  36732401 atcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagttta 36732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 16198888 - 16198851
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagt 91  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  16198888 taaggtaaaagtgggactaactttctctaattctaagt 16198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 20879566 - 20879494
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||| |  ||| | ||| ||||||||||||||||||||| |||| ||||    
T  20879566 agagaagaggagcaaacttgtagagtccgaattcaaccaatctaaggtaagggtgggactaaccttctttaat 20879494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 18816295 - 18816347
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| ||||||||||   |  |||||||||||||||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaa 18816347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 22483834 - 22483786
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22483786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 177; Significance: 2e-95; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 32085 - 31881
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32085 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagttt 31986  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |    
T  31985 agcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagt 31886  T
Q  215 gatgt 219  Q
    |||||    
T  31885 gatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 37392 - 37188
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37392 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagttt 37293  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |    
T  37292 agcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagt 37193  T
Q  215 gatgt 219  Q
    |||||    
T  37192 gatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 77778 - 77574
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||| ||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  77778 gagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagttt 77679  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  77678 agcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtataatt 77579  T
Q  215 gatgt 219  Q
    |||||    
T  77578 gatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 1296 - 1092
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| | |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1296 gagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 1197  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1196 agcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaatt 1097  T
Q  215 gatgt 219  Q
    |||||    
T  1096 gatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 31 - 219
Target Start/End: Original strand, 11251 - 11439
Alignment:
Q  31 ttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttg 130  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttg 11350  T
Q  131 tagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11351 tagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 34430 - 34226
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  34430 gagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagttt 34331  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34330 agcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaatt 34231  T
Q  215 gatgt 219  Q
    |||||    
T  34230 gatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 135  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21754 - 21958
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  21754 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaattt 21853  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  21854 agcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaatt 21953  T
Q  215 gatgt 219  Q
    |||||    
T  21954 gatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 164; Significance: 9e-88; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 12506 - 12693
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  157 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 190 - 25
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 21300017 - 21300209
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 126  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  127 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 19921727 - 19921525
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtggga------ctaactttctctaattctaagttgtataattctgaaattgagtttag 116  Q
    ||||||||| |||||| || |||||||||| ||||||||||||||||      ||| ||||||||||||||||||||||||||||||||||||||||||     
T  19921727 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgagtttaa 19921628  T
Q  117 catgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 216  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  19921627 catgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattga 19921528  T
Q  217 tgt 219  Q
    |||    
T  19921527 tgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 20566598 - 20566445
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  45 catctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatt 144  Q
    |||||||| |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  145 tgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 148  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  149 aattaggttttgaagttgtaattggttgtt 178  Q
    ||||| |||| |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 21617928 - 21618047
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||  ||||||| |||| || |||||||||||||||| |||||||||| |||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  153 aggttttgaagttgtaattg 172  Q
    ||| || ||||||| |||||    
T  21618028 agggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||||||||||||||| ||||| |||| ||||||||| ||  |||| ||    ||||||||||||| ||| ||||||| |||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
    ||||| |||||||||||||||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 23199176 - 23199259
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 22111881 - 22111762
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||||||||||||| | ||||   | || ||||||| |||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  153 aggttttgaagttgtaattg 172  Q
    ||||||| |||| |||||||    
T  22111781 aggttttcaagtcgtaattg 22111762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |||| | ||| |||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  153 aggttt 158  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 21398605 - 21398674
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||||||    
T  21398605 gagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 10954141 - 10954038
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||  |||| ||||||||||| ||||||| |||  ||||  ||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 10954042  T
Q  154 ggtt 157  Q
    ||||    
T  10954041 ggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 162
Target Start/End: Original strand, 10774664 - 10774771
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| |||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 10774761  T
Q  153 aggttttgaa 162  Q
    ||| ||||||    
T  10774762 agggtttgaa 10774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 177
Target Start/End: Complemental strand, 17876266 - 17876132
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatggga 141  Q
    |||||||||| ||| |||||||||  |||||| |||  ||||||| |||  ||| ||||||||| |||  |||| || || ||||||||||||| ||  |    
T  17876266 atcatctaatctaatgtaagggtgaaactaaccttcaataattctgagta-tatgattctgaaaattggatttaacaggtggtaggttgtagttctgaaa 17876168  T
Q  142 atttgggaattaggttttgaagttgtaattggttgt 177  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17876167 atttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 266091 - 266038
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 17011780 - 17011728
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 21405628 - 21405751
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 151  Q
    ||||||||||||| ||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| |||    
T  21405628 taaggtaagggtgagactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaat 21405726  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| || |||||||||||||||||    
T  21405727 tagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  94 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 174  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | |||||||| ||||||||||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 25249828 - 25249910
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 135  Q
    |||||||||||| |||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25249828 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 25313612 - 25313694
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 135  Q
    |||||||||||| |||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25313612 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 32607284 - 32607346
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||||| |||||| || || ||||||| ||||||||||||||||||| |||||||||||    
T  32607284 ggagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 18744926 - 18744874
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  18744926 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 8503856 - 8503913
Alignment:
Q  22 ggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttct 79  Q
    |||||||||| |||||| || || ||||||| ||||||||||||||||||||| ||||    
T  8503856 ggagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 207  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 16063845 - 16063755
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    ||||||| ||||||| |||||||||||   | ||| | ||| ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  16063845 agagaagaggagcaagcttgtagagtctgtattcaaccaatctaaggtaagggtgggactacctttctctaataatgggttgtataattct 16063755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 30138059 - 30138098
Alignment:
Q  139 ggaatttgggaattaggttttgaagttgtaattggttgtt 178  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  30138059 ggaaattgggaattaggtttagaagttgtaattggttgtt 30138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 1627066 - 1627115
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||| ||||||||||||||| |||||||||||  | ||||||||||||||    
T  1627066 ttaacgtaagggtgggactagctttctctaataatgagttgtataattct 1627115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 14025796 - 14025837
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||||||| ||||||||||||||||||||| |||| ||||    
T  14025796 atcatctaatctaaggtaagggtgggactaaccttctttaat 14025837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 29448892 - 29448840
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| | || ||||||||||||||||||||||||  | |||||||||||    
T  29448892 taaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaa 29448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 696 - 861
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 3234 - 3069
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  112 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  212 attgatgt 219  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 13392 - 13557
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 168999 - 169164
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  50 aatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  150 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 570 - 405
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 146775 - 146610
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 1217 - 1052
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 140; Significance: 2e-73; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 328277 - 328455
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattct--aagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 140  Q
    |||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||||     
T  328277 atcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatgga 328376  T
Q  141 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 219  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  328377 aatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||||||||||| ||||||||||||||  || ||||||||||||||||||||||| ||||||||||| | |||||  | || |||||||||||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 207  Q
    |||||      ||||||||||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 72989 - 72841
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| ||| |||||||| |||||||||| |||  || ||||||||||||| ||||||||||||| ||||||| | | ||        ||||||| |||||    
T  72989 ttaacgtatgggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaatt 72898  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 209  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72897 aggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 110227 - 110121
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||| ||||||||| ||||||||||||||||||||||||  |||||||||| ||||||| |||| || |||||||||||||||| |||| ||||| | ||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggat 110128  T
Q  152 taggttt 158  Q
    |||||||    
T  110127 taggttt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 73181 - 73069
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgag 111  Q
    ||||||| ||||||| |||||||||||   || |||||||| |||||||||||||||||||||||||||||||  | |||||||| ||||| |||  | |    
T  73181 agagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaagggg 73082  T
Q  112 tttagcatgttgt 124  Q
    |||| ||||||||    
T  73081 tttaacatgttgt 73069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 66060 - 66124
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||| | |||||||||||||||||||  ||||| ||||  |  |||||||||||||||||    
T  66060 aatcatctattctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaa 66124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 78146 - 78298
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78146 gagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 78245  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgt 167  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  78246 agcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 24092 - 24235
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24092 gagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 24191  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24192 agcatgttgtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 30122 - 30023
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||| |||  ||| |||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | ||||||||||||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 30024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 79140 - 78955
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  79140 gagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagttt 79041  T
Q  115 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||||       |||||||        |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  79040 agcatgtt-------gtagtta--------tgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaatt 78956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaat 193  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||  |||| ||  | |||| |||||||| ||| |||||||||||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
     |||| |||||||||||||||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 41 - 215
Target Start/End: Complemental strand, 19818 - 19652
Alignment:
Q  41 caatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 140  Q
    |||||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||        |    
T  19818 caatcaaccaatctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------g 19727  T
Q  141 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  154 ggttttgaagttgtaattggttgttaa 180  Q
    ||||||||||| |||||||||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 2646 - 2524
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 114  Q
    |||||| |||||||||| |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2646 gagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 2547  T
Q  115 agcatgttgtaggttgtagttat 137  Q
    |||||||||||||||||||||||    
T  2546 agcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 112966 - 113127
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa--ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||| |||||||||||||||||||||||||||||||||  ||||| |||||||  |||| |||| || ||||||||||||| || |||||||||||||||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  152 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 81620 - 81501
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||||||||||||||||||||| ||| ||||||||||  || || |||||  ||||||| |||| || |||||||||||||||| |||||||||||||||    
T  81620 ttaaggtaagggtgggactaaccttcactaattctaa-atggatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 81522  T
Q  152 taggttttgaagttgtaattg 172  Q
    ||||||| |||||||||||||    
T  81521 taggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 117807 - 117960
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||  ||||||| |||| || |||| || |||||        | |||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta--------attttgggaat 117898  T
Q  152 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    ||||||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||||    
T  117899 taggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaatt 117960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 2941 - 2787
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||        ||||||| ||||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  154 ggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 215  Q
    ||||||||| | || ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 156  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| ||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  157 tttgaagttgtaattggttgtt 178  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 10755 - 10913
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||  |||| || |||||||||| ||||| |||||||||||||||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  154 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 214  Q
    || || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 5045 - 5120
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggtt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||  |||| || ||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 1989 - 1937
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||| |||||||||||||||||| |||||||||||||  | |||||||||||    
T  1989 taaggaaagggtgggactaactttatctaattctaagtattttaattctgaaa 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||||||| | ||||        |||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 209  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||||||||||| ||||||||| | ||||        ||||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  158 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 209  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 19759 - 19605
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| ||||| |||||| ||| ||||||||||  || ||| ||||||||||||||||||||||||||||||| | ||||   | || ||||||| |||||    
T  19759 ttaacgtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaatt 19660  T
Q  153 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 208  Q
    ||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19659 aggttatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 5546 - 5454
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  5546 agagaagaggagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 11708 - 11616
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||| |||||||||| | |||| || |||||||||| |||| ||||||||||||||| |||||||||   |  |||||||||||||||||    
T  11708 agagaagaggagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaa 11616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 19948 - 19878
Alignment:
Q  14 agagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| |||||||||| |||||  || |||||||||| |||||||||||| ||||||  ||||||||||    
T  19948 agagaagaggagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 1047 - 1226
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga 141  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||| || ||||||||||| |||| || ||    
T  1047 atcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgaga 1146  T
Q  142 atttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 222  Q
    |||||||| ||||| || |||||||||||| |||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  1147 atttgggatttagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 19298 - 19207
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19298 gagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  60 aagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttt 159  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||| ||  |||| ||||| ||||||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  160 gaagttgtaattggttgtt 178  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 4709 - 4830
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||   ||||||||| ||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  153 aggttttgaagttgtaattggt 174  Q
    |||||| |||||||| ||||||    
T  4809 aggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 156  Q
    |||||||||||| ||||||||| ||||| || ||||||||||||||||| |||||||||||||||||| | ||||        |||||||||||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  157 tttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttg 205  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  153 aggttttgaagttgtaattggtt 175  Q
    ||  || ||||||| ||||||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 10851 - 10741
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||        |||||||||||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  153 aggttttgaagttgtaatt 171  Q
    |||||||||||||||||||    
T  10759 aggttttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 11038 - 10969
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||| ||  |||||||||| |||||||||||||| |||| |||||||||||    
T  11038 gagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 151  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||| |||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| || |||||||||||||||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 18856 - 18744
Alignment:
Q  97 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatcc 195  Q
    ||||||||||||||||||| |||||||| | | | | ||   |||||| |||||||||||||||| | ||| |||| ||||||||| || ||||||||||    
T  18856 aattctgaaattgagtttaacatgttgtggttgggaatttgaggaatt-gggaattaggttttgagaattgcaattagttgttaattgaatagaaaatcc 18758  T
Q  196 gttgaatttgtgta 209  Q
     | |||||||||||    
T  18757 atagaatttgtgta 18744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||  |||| || || ||||  ||||||| ||| |||||||||||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  154 ggttttgaagttgtaattggttgtt 178  Q
    ||||| || ||||||||||||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

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Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||||| |||  ||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| ||||||||| |||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  154 ggttttgaagttgtaattggttg 176  Q
    || || |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    ||||| ||||||||||| |||| ||| |||||||||||| |||| ||| ||||| |||| |||| ||||||||||||||||||| ||| |||||||||||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||||||  ||||||||||||||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaat 151  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||  |||  ||||||||||||| ||||| |||||||||||  |||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  152 taggttttgaagttgtaattggttg 176  Q
    |||| || |||||||||||||||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 5716 - 5633
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 20086 - 20202
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||| ||||||||| ||| |||||||||||| |||||||||||||| |||| |||| || |||||||||| ||||| ||||||||||||||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  153 aggttttgaagttgtaatt 171  Q
    | |||| ||||||||||||    
T  20184 atgtttagaagttgtaatt 20202  T

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Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||  |||| ||  ||||||||||||||| | |||||||||||||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  153 aggttttgaagttg 166  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 18338 - 18275
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18338 atcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 60947 - 60843
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| |||||    
T  60947 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 60848  T
Q  153 aggtt 157  Q
    |||||    
T  60847 aggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 126305 - 126407
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||| || | ||||| ||||||    
T  126305 taaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaatta 126403  T
Q  154 ggtt 157  Q
    ||||    
T  126404 ggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 20006 - 19905
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||||||| |||| ||||| |||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatt 19908  T
Q  153 agg 155  Q
    |||    
T  19907 agg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 13911 - 13878
Alignment:
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||| |||||||||||||||||    
T  13911 tttgggaattaggtttagaagttgtaattggttg 13878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 14006 - 13949
Alignment:
Q  49 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||| ||||||||||||||||||| |||||||||||  |  |||||| ||||||||||    
T  14006 taatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaa 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 2189 - 2252
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2189 atcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 2423 - 2506
Alignment:
Q  23 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  62 gggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 124  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 23853 - 23922
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||    
T  23853 gagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  59 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 4992 - 4888
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||  |||| ||||||||||| ||||||| || | ||||  |||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatttaagaatt 4893  T
Q  153 aggtt 157  Q
    |||||    
T  4892 aggtt 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 4437 - 4333
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||| | |||||||||| |||| |||||||||||||||||||||||| || ||  |||| ||||||||||||||||||| || | ||||| |||||    
T  4437 taaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatt 4338  T
Q  153 aggtt 157  Q
    |||||    
T  4337 aggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 15324 - 15272
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 398614 - 398510
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||  |||| ||||||||||| ||||||| || | ||||  |||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 398515  T
Q  153 aggtt 157  Q
    |||||    
T  398514 aggtt 398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 5294 - 5353
Alignment:
Q  43 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5294 atcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 96446 - 96347
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 157  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||| ||  |||| || |||||||||||||||| || | ||| | ||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggagaattaggtt 96347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  141 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 207  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 5418 - 5311
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| |||||||    
T  5418 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 5321  T
Q  153 aggttttgaa 162  Q
    ||| ||||||    
T  5320 agggtttgaa 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 18731 - 18764
Alignment:
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    |||||||||||||||| |||||||||||||||||    
T  18731 tttgggaattaggtttagaagttgtaattggttg 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 9111 - 9004
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    ||||||||||||||||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| | |||||||||||||||    
T  9111 taaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatta 9013  T
Q  154 ggttttgaa 162  Q
    || ||||||    
T  9012 gggtttgaa 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  98 attctgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 177  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||| |||||| ||||||||||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

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Target: scaffold0065 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 52544 - 52648
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||| |||||||||||||||| |||  |||||||||||||| ||||||||| |||||  |||| ||||||||||| ||||||| || | ||||| |||||    
T  52544 taagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaatt 52643  T
Q  153 aggtt 157  Q
    |||||    
T  52644 aggtt 52648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 29440 - 29340
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||  |||| |||||||||||||||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| |||||    
T  29440 taaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 29341  T
Q  153 a 153  Q
    |    
T  29340 a 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 158822 - 158949
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||  ||||||| |||  ||| ||||| ||| |||  |||| || |||||||||||||||| ||||||||||||||||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 158920  T
Q  153 aggttttgaagttgtaattggttgttaat 181  Q
    ||| || ||||||| || |||||| ||||    
T  158921 agggttagaagttgcaaatggttgataat 158949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 18701 - 18749
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattct 102  Q
    |||||| ||||||||| ||||||||||||||  | ||||||||||||||    
T  18701 taaggtgagggtgggattaactttctctaataatgagttgtataattct 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  69 actaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 168  Q
    |||||| ||| ||||| |||||| |||| ||||| ||||||| |||| || ||| |||||||| ||| |||||||||| ||||||||||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  169 attggttg 176  Q
    ||| ||||    
T  4619 attagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 28642 - 28583
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 74  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  28642 gagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 13525 - 13572
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 74  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 28319 - 28451
Alignment:
Q  44 tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 142  Q
    |||| ||| |||||||||||||||||||| | |||  ||||||| |||  ||| ||||||||| |||  |||| || |||||||||||||||| ||||||    
T  28319 tcatttaaattaaggtaagggtgggactacccttcaataattctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaa 28417  T
Q  143 tttgggaattaggttttgaagttgtaattggttg 176  Q
    ||||| ||||||| || ||||||| || ||||||    
T  28418 tttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 127301 - 127373
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  127301 agagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 9012 - 8960
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 31160 - 31046
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    ||||||||||||||||||||| |||  ||||||| || | | |||||||| ||||||  |||| || |||||||||||||||| ||||||||||||||||    
T  31160 taaggtaagggtgggactaaccttcaataattctgag-tatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatt 31063  T
Q  153 aggttttgaagttgtaa 169  Q
    ||| ||  |||||||||    
T  31062 agggttaaaagttgtaa 31046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 21149 - 21097
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 34164 - 34112
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 69853 - 69905
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 195 - 233
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagt 91  Q
    |||||||||||||||||||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 3383 - 3474
Alignment:
Q  16 agaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||| ||||||| ||| ||||||||  ||||||||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  3383 agaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaa 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 11121 - 11190
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| | ||||||||| ||| |||| |||| |||||||||||||||| |||||||| |||||||||||    
T  11121 gagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  57 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 14574 - 14638
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14574 aatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 23632 - 23696
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  23632 aatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 29216 - 29268
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  29216 taaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 121005 - 120905
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | ||||| ||||||    
T  121005 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgtgaatta 120907  T
Q  154 gg 155  Q
    ||    
T  120906 gg 120905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 35464 - 35586
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 152  Q
    |||||||||| |||||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  35464 taaggtaaggatgggactaacctttattaattctgagta-tatgattctgaaaattgaatttaacaacttgtaggttgtagttttgggaatttgggaatt 35562  T
Q  153 aggttttgaagttgtaattggttg 176  Q
    | | || ||||||| || ||||||    
T  35563 aaggttagaagttgcaaatggttg 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 5000 - 4958
Alignment:
Q  42 aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  5000 aatcatctaatataaggtaagggtgggactagctttctctaat 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 13417 - 13505
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 142  Q
    ||||||||||||||||||||| |||  ||||||||||  || |||||||| ||| ||| |||| || |||||||||||||||| ||||||    
T  13417 taaggtaagggtgggactaaccttcaataattctaag-ggtttaattctgaaaactgaatttaacaagttgtaggttgtagttttgggaa 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 15575 - 15638
Alignment:
Q  14 agagaagtggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactt 76  Q
    ||||||| ||||||| ||| ||||||||  ||||||||||| |||||||||||||||||||||||    
T  15575 agagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt 15638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 6416 - 6383
Alignment:
Q  58 gtaagggtgggactaactttctctaattctaagt 91  Q
    ||||||||||||||||||||||||||||||||||    
T  6416 gtaagggtgggactaactttctctaattctaagt 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 21777 - 21814
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagt 91  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21777 taaggtaaggatgggactaactttctctaattctaagt 21814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 5861 - 5913
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  5861 taaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 5913  T

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Target: scaffold0308 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 13442 - 13370
Alignment:
Q  104 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 176  Q
    ||||||| |||| || ||||||||||| |||| ||||||||||||||||||| ||  |||||| || ||||||    
T  13442 aaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagggttaaaagttgcaaatggttg 13370  T

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Target: scaffold0730 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 6473 - 6575
Alignment:
Q  24 agcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 121  Q
    ||||| |||||||||||   ||||||||||| |||||||| || ||||||| |||||||||||  |  ||||||| |||||||||  | ||||| |||||    
T  6473 agcaagcttgtagagtctgaaatcatctaatctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaacatgt 6572  T
Q  122 tgt 124  Q
    |||    
T  6573 tgt 6575  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 30705 - 30607
Alignment:
Q  55 aaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 153  Q
    |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || |||||||| |||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgagaatttggaaatta 30607  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  27 aatcttgtagagtccaatcatctaatttaaggtaagggtg 66  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 155
Target Start/End: Complemental strand, 28030 - 27928
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 151  Q
    |||||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | |||||| |||    
T  28030 ttaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttggaaat 27932  T
Q  152 tagg 155  Q
    ||||    
T  27931 tagg 27928  T

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Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 42888 - 42811
Alignment:
Q  53 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggtt 129  Q
    |||||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| |||||||||||||    
T  42888 ttaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt 42811  T

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Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 510 - 448
Alignment:
Q  94 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 155  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 448  T

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Target: scaffold0371 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 10407 - 10476
Alignment:
Q  15 gagaagtggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    |||||| |||||||||||||||||| | |||   |||  ||||||||||||||||||||| |||| ||||    
T  10407 gagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 10476  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 8930 - 8866
Alignment:
Q  22 ggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 84  Q
    ||||||| |||||||||||   ||||||||||| |||| |||||||||||||| |||| ||||||    
T  8930 ggagcaagcttgtagagtctgaaatcatctaatctaagttaagggtgggactagctttatctaat 8866  T

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Target: scaffold1186 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 2072 - 2020
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  2072 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 2020  T

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Target: scaffold0594 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 2299 - 2247
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  2299 taaggtaagggtgggactagctttctataataatgggttgtataattctgaaa 2247  T

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Target: scaffold0462 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 11275 - 11223
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| | ||||||||||||||||| ||||  | |||||||||||    
T  11275 taaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaa 11223  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 15009 - 14957
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||  || | ||||||||||||||| ||||||||||    
T  15009 taaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaa 14957  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 17029 - 16977
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    |||||| |||||||||||||  || | ||||||||||||||| ||||||||||    
T  17029 taaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaa 16977  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 186196 - 186248
Alignment:
Q  54 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 106  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  186196 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 186248  T

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