View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9424_low_7 (Length: 326)

Name: NF9424_low_7
Description: NF9424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9424_low_7
NF9424_low_7
[»] chr4 (36 HSPs)
chr4 (61-319)||(25513653-25513911)
chr4 (41-267)||(26446061-26446287)
chr4 (41-267)||(2424359-2424585)
chr4 (68-267)||(14630991-14631188)
chr4 (68-162)||(16296897-16296991)
chr4 (56-177)||(9638954-9639075)
chr4 (75-171)||(35660906-35661002)
chr4 (260-323)||(26445877-26445940)
chr4 (56-174)||(33186850-33186968)
chr4 (56-174)||(12424277-12424397)
chr4 (68-179)||(15239815-15239927)
chr4 (260-323)||(2424706-2424769)
chr4 (68-175)||(9622434-9622542)
chr4 (68-175)||(55583141-55583249)
chr4 (260-323)||(15747904-15747967)
chr4 (41-179)||(26921481-26921619)
chr4 (260-316)||(16025937-16025993)
chr4 (41-174)||(46741147-46741279)
chr4 (64-129)||(13847193-13847258)
chr4 (111-179)||(45314124-45314193)
chr4 (260-316)||(14630814-14630870)
chr4 (68-175)||(14477578-14477684)
chr4 (62-116)||(10273388-10273442)
chr4 (41-174)||(12623264-12623396)
chr4 (260-323)||(17142882-17142942)
chr4 (68-171)||(18462974-18463076)
chr4 (182-265)||(19622097-19622179)
chr4 (184-255)||(19080175-19080245)
chr4 (41-174)||(19565890-19566022)
chr4 (83-144)||(15747787-15747848)
chr4 (282-314)||(10237422-10237454)
chr4 (80-144)||(17142999-17143063)
chr4 (118-175)||(20150771-20150829)
chr4 (45-87)||(26014318-26014360)
chr4 (146-174)||(16296819-16296847)
chr4 (67-99)||(21062663-21062695)
[»] chr7 (49 HSPs)
chr7 (41-267)||(43745510-43745736)
chr7 (68-259)||(15575648-15575839)
chr7 (68-267)||(47095306-47095505)
chr7 (44-267)||(48212702-48212927)
chr7 (41-259)||(4690635-4690851)
chr7 (68-264)||(20252181-20252381)
chr7 (68-267)||(18874664-18874859)
chr7 (109-226)||(16186808-16186925)
chr7 (68-177)||(708428-708537)
chr7 (56-171)||(19195562-19195676)
chr7 (64-144)||(8513748-8513828)
chr7 (64-144)||(8488089-8488169)
chr7 (56-175)||(58400-58517)
chr7 (260-323)||(4690980-4691043)
chr7 (260-323)||(43745326-43745389)
chr7 (61-175)||(13744502-13744614)
chr7 (61-131)||(38299738-38299808)
chr7 (260-323)||(831981-832044)
chr7 (260-323)||(1197161-1197224)
chr7 (69-175)||(25943213-25943319)
chr7 (260-323)||(34958202-34958265)
chr7 (56-174)||(43276731-43276848)
chr7 (260-322)||(47095123-47095185)
chr7 (61-175)||(8930757-8930872)
chr7 (68-175)||(15700734-15700840)
chr7 (260-323)||(48213032-48213095)
chr7 (68-175)||(33556104-33556211)
chr7 (69-175)||(15720724-15720831)
chr7 (68-132)||(16250221-16250285)
chr7 (61-132)||(13315074-13315145)
chr7 (260-314)||(18079617-18079671)
chr7 (68-175)||(36300640-36300745)
chr7 (68-122)||(3287743-3287797)
chr7 (68-175)||(18570592-18570700)
chr7 (56-126)||(19283051-19283121)
chr7 (80-144)||(34958322-34958386)
chr7 (109-171)||(42565872-42565934)
chr7 (80-144)||(831861-831925)
chr7 (80-144)||(1197041-1197105)
chr7 (169-252)||(16368271-16368354)
chr7 (64-99)||(4071842-4071877)
chr7 (56-99)||(12127150-12127193)
chr7 (64-99)||(12754607-12754642)
chr7 (68-171)||(33060389-33060491)
chr7 (64-99)||(35771436-35771471)
chr7 (118-174)||(9743127-9743183)
chr7 (118-174)||(15119355-15119411)
chr7 (73-137)||(15700887-15700951)
chr7 (118-177)||(16496154-16496214)
[»] scaffold0056 (1 HSPs)
scaffold0056 (41-267)||(18129-18355)
[»] chr8 (39 HSPs)
chr8 (41-267)||(21514545-21514771)
chr8 (69-267)||(18816295-18816493)
chr8 (45-267)||(4380593-4380807)
chr8 (41-171)||(36732384-36732514)
chr8 (56-174)||(22208216-22208334)
chr8 (68-174)||(12577826-12577932)
chr8 (68-180)||(21676592-21676702)
chr8 (260-323)||(38185044-38185107)
chr8 (68-175)||(21399662-21399770)
chr8 (68-175)||(21794155-21794263)
chr8 (260-323)||(18023653-18023716)
chr8 (260-323)||(20494632-20494695)
chr8 (68-171)||(21678845-21678946)
chr8 (56-165)||(22258293-22258403)
chr8 (56-175)||(18834371-18834487)
chr8 (260-323)||(21514361-21514424)
chr8 (61-132)||(22345153-22345224)
chr8 (61-132)||(22356813-22356884)
chr8 (73-132)||(22483775-22483834)
chr8 (43-99)||(5761555-5761611)
chr8 (68-156)||(21676499-21676585)
chr8 (80-144)||(18023567-18023631)
chr8 (68-175)||(22610266-22610371)
chr8 (41-174)||(17978388-17978520)
chr8 (61-175)||(23884116-23884229)
chr8 (80-141)||(38184923-38184984)
chr8 (41-174)||(22474704-22474836)
chr8 (260-314)||(22366072-22366123)
chr8 (56-131)||(36305988-36306062)
chr8 (45-99)||(20022016-20022070)
chr8 (68-132)||(22483927-22483990)
chr8 (64-99)||(17906844-17906879)
chr8 (260-314)||(22723251-22723305)
chr8 (118-175)||(22966756-22966814)
chr8 (118-174)||(21579254-21579310)
chr8 (119-175)||(21697509-21697566)
chr8 (118-165)||(12037212-12037260)
chr8 (282-314)||(24907883-24907915)
chr8 (118-165)||(29762916-29762964)
[»] chr5 (23 HSPs)
chr5 (41-267)||(660644-660868)
chr5 (56-267)||(23199194-23199405)
chr5 (68-230)||(18744765-18744927)
chr5 (73-267)||(1627071-1627266)
chr5 (68-171)||(16063701-16063804)
chr5 (56-175)||(32607303-32607423)
chr5 (68-171)||(6551289-6551392)
chr5 (260-323)||(1627387-1627450)
chr5 (260-316)||(18744558-18744614)
chr5 (41-144)||(1626890-1626992)
chr5 (56-175)||(21398631-21398752)
chr5 (41-144)||(14025779-14025881)
chr5 (41-175)||(26749978-26750111)
chr5 (118-181)||(21504080-21504143)
chr5 (280-323)||(660463-660506)
chr5 (45-174)||(8833182-8833310)
chr5 (68-132)||(20313266-20313328)
chr5 (64-174)||(26762350-26762459)
chr5 (118-175)||(24068175-24068233)
chr5 (61-99)||(21300036-21300074)
chr5 (146-175)||(22111923-22111952)
chr5 (73-173)||(21398800-21398904)
chr5 (61-121)||(31622117-31622177)
[»] chr1 (33 HSPs)
chr1 (41-267)||(24719483-24719708)
chr1 (61-265)||(28476726-28476930)
chr1 (61-229)||(12710759-12710927)
chr1 (68-177)||(38056671-38056780)
chr1 (68-152)||(50544841-50544925)
chr1 (68-174)||(24007224-24007330)
chr1 (69-155)||(22145666-22145752)
chr1 (56-174)||(8306552-8306671)
chr1 (67-177)||(8275987-8276097)
chr1 (260-321)||(28477053-28477114)
chr1 (68-175)||(34392713-34392821)
chr1 (68-132)||(17901793-17901857)
chr1 (41-144)||(14792535-14792637)
chr1 (68-174)||(39061268-39061373)
chr1 (69-175)||(20588581-20588690)
chr1 (69-175)||(20593119-20593228)
chr1 (41-165)||(18121559-18121683)
chr1 (68-175)||(45499487-45499595)
chr1 (68-129)||(635003-635064)
chr1 (68-132)||(6834165-6834229)
chr1 (61-132)||(35895088-35895159)
chr1 (41-144)||(44892427-44892529)
chr1 (68-108)||(7703135-7703175)
chr1 (69-132)||(16401902-16401963)
chr1 (68-174)||(20708058-20708163)
chr1 (41-99)||(24723323-24723381)
chr1 (41-174)||(38887059-38887191)
chr1 (118-175)||(40390096-40390154)
chr1 (68-171)||(21188033-21188135)
chr1 (260-294)||(20822729-20822763)
chr1 (118-177)||(14294859-14294919)
chr1 (286-314)||(20822698-20822726)
chr1 (118-177)||(51131317-51131377)
[»] chr2 (20 HSPs)
chr2 (68-267)||(21315475-21315674)
chr2 (68-267)||(21335265-21335464)
chr2 (56-267)||(21369147-21369358)
chr2 (43-267)||(23610474-23610704)
chr2 (56-174)||(149488-149610)
chr2 (111-179)||(28652593-28652662)
chr2 (61-132)||(23801485-23801556)
chr2 (68-171)||(20005970-20006072)
chr2 (68-175)||(28344987-28345092)
chr2 (41-99)||(19201172-19201230)
chr2 (109-174)||(25584302-25584367)
chr2 (68-175)||(34491239-34491350)
chr2 (109-175)||(19647180-19647246)
chr2 (56-99)||(17307508-17307551)
chr2 (56-99)||(22501993-22502036)
chr2 (56-99)||(22509927-22509970)
chr2 (68-171)||(45535876-45535978)
chr2 (146-175)||(25584189-25584218)
chr2 (285-314)||(29114431-29114460)
chr2 (68-132)||(36734450-36734512)
[»] scaffold0878 (2 HSPs)
scaffold0878 (61-267)||(3414-3620)
scaffold0878 (260-323)||(3741-3804)
[»] scaffold0516 (2 HSPs)
scaffold0516 (41-252)||(5277-5488)
scaffold0516 (41-87)||(5180-5226)
[»] chr3 (40 HSPs)
chr3 (68-267)||(14520300-14520499)
chr3 (68-267)||(17208378-17208577)
chr3 (41-267)||(24547054-24547280)
chr3 (41-267)||(24548926-24549149)
chr3 (61-177)||(29907582-29907699)
chr3 (61-177)||(29948748-29948865)
chr3 (61-177)||(29997902-29998019)
chr3 (56-177)||(14641535-14641656)
chr3 (64-174)||(14152394-14152504)
chr3 (260-323)||(2247998-2248061)
chr3 (68-175)||(22841278-22841390)
chr3 (69-175)||(54875474-54875581)
chr3 (68-175)||(3527156-3527261)
chr3 (260-323)||(24546870-24546933)
chr3 (69-174)||(5215594-5215699)
chr3 (68-175)||(6156656-6156763)
chr3 (56-175)||(6159350-6159470)
chr3 (69-175)||(17684835-17684942)
chr3 (56-179)||(50350803-50350928)
chr3 (68-175)||(14442120-14442228)
chr3 (69-175)||(17669698-17669805)
chr3 (68-181)||(21845651-21845763)
chr3 (260-320)||(24549270-24549330)
chr3 (76-132)||(45803338-45803394)
chr3 (68-175)||(2841505-2841613)
chr3 (80-144)||(2247877-2247941)
chr3 (68-144)||(15566721-15566797)
chr3 (68-132)||(12917305-12917369)
chr3 (68-171)||(3160626-3160728)
chr3 (68-175)||(48631278-48631384)
chr3 (81-174)||(50755266-50755360)
chr3 (68-181)||(25202074-25202187)
chr3 (68-174)||(6003133-6003238)
chr3 (45-99)||(11563747-11563801)
chr3 (272-314)||(25104106-25104148)
chr3 (130-171)||(13520408-13520449)
chr3 (64-99)||(16050949-16050984)
chr3 (61-174)||(53646051-53646163)
chr3 (134-175)||(12155089-12155130)
chr3 (118-174)||(54330355-54330411)
[»] chr6 (20 HSPs)
chr6 (54-267)||(20410497-20410708)
chr6 (166-323)||(21686158-21686315)
chr6 (45-166)||(21683051-21683171)
chr6 (67-204)||(15998806-15998943)
chr6 (56-159)||(19825473-19825576)
chr6 (68-177)||(18982515-18982625)
chr6 (68-165)||(23658044-23658142)
chr6 (61-175)||(10446162-10446277)
chr6 (61-169)||(34140448-34140554)
chr6 (61-169)||(34153064-34153170)
chr6 (68-175)||(1818899-1819005)
chr6 (41-174)||(7217216-7217347)
chr6 (68-132)||(29045260-29045324)
chr6 (41-144)||(18455045-18455147)
chr6 (111-179)||(25601371-25601437)
chr6 (109-171)||(24506155-24506217)
chr6 (45-165)||(22557204-22557323)
chr6 (61-144)||(13285725-13285808)
chr6 (64-174)||(31734655-31734764)
chr6 (118-174)||(18982362-18982418)
[»] scaffold0369 (2 HSPs)
scaffold0369 (61-267)||(15608-15813)
scaffold0369 (260-323)||(15934-15997)
[»] scaffold1186 (2 HSPs)
scaffold1186 (68-267)||(1876-2073)
scaffold1186 (260-316)||(1699-1755)
[»] scaffold0231 (1 HSPs)
scaffold0231 (68-267)||(17520-17719)
[»] scaffold0005 (2 HSPs)
scaffold0005 (68-267)||(186195-186392)
scaffold0005 (260-316)||(186513-186569)
[»] scaffold0853 (1 HSPs)
scaffold0853 (69-267)||(2454-2652)
[»] scaffold0203 (1 HSPs)
scaffold0203 (56-266)||(17927-18137)
[»] scaffold0162 (2 HSPs)
scaffold0162 (119-267)||(23932-24080)
scaffold0162 (70-102)||(23893-23925)
[»] scaffold0032 (1 HSPs)
scaffold0032 (56-266)||(61835-62048)
[»] scaffold0414 (1 HSPs)
scaffold0414 (69-267)||(11160-11359)
[»] scaffold0676 (1 HSPs)
scaffold0676 (68-171)||(2831-2934)
[»] scaffold1256 (1 HSPs)
scaffold1256 (41-156)||(2172-2287)
[»] scaffold0247 (1 HSPs)
scaffold0247 (69-175)||(1022-1128)
[»] scaffold0220 (2 HSPs)
scaffold0220 (68-177)||(13893-14002)
scaffold0220 (64-99)||(19976-20011)
[»] scaffold0505 (1 HSPs)
scaffold0505 (69-179)||(4878-4988)
[»] scaffold0061 (2 HSPs)
scaffold0061 (61-171)||(14578-14689)
scaffold0061 (61-171)||(23636-23747)
[»] scaffold0213 (2 HSPs)
scaffold0213 (56-174)||(19154-19272)
scaffold0213 (122-167)||(19115-19160)
[»] scaffold0017 (2 HSPs)
scaffold0017 (41-179)||(26669-26807)
scaffold0017 (68-171)||(23564-23666)
[»] scaffold0328 (1 HSPs)
scaffold0328 (56-177)||(18627-18749)
[»] scaffold0007 (3 HSPs)
scaffold0007 (68-177)||(16418-16528)
scaffold0007 (68-177)||(18700-18811)
scaffold0007 (118-174)||(18906-18962)
[»] scaffold0555 (1 HSPs)
scaffold0555 (45-175)||(8722-8853)
[»] scaffold0298 (2 HSPs)
scaffold0298 (260-323)||(242-305)
scaffold0298 (80-144)||(362-426)
[»] scaffold0431 (1 HSPs)
scaffold0431 (56-174)||(5578-5698)
[»] scaffold0261 (1 HSPs)
scaffold0261 (41-179)||(6392-6529)
[»] scaffold0174 (3 HSPs)
scaffold0174 (56-175)||(19801-19921)
scaffold0174 (61-130)||(5445-5514)
scaffold0174 (56-132)||(11605-11681)
[»] scaffold0379 (1 HSPs)
scaffold0379 (69-175)||(10893-10999)
[»] scaffold0031 (1 HSPs)
scaffold0031 (61-175)||(127335-127450)
[»] scaffold0594 (1 HSPs)
scaffold0594 (68-132)||(2236-2300)
[»] scaffold0180 (2 HSPs)
scaffold0180 (260-323)||(10453-10516)
scaffold0180 (80-144)||(10573-10636)
[»] scaffold0125 (1 HSPs)
scaffold0125 (61-179)||(28493-28611)
[»] scaffold0108 (1 HSPs)
scaffold0108 (41-144)||(6395-6498)
[»] scaffold0439 (1 HSPs)
scaffold0439 (41-174)||(4369-4501)
[»] scaffold0004 (5 HSPs)
scaffold0004 (41-99)||(328260-328318)
scaffold0004 (68-132)||(66071-66135)
scaffold0004 (61-172)||(75885-75997)
scaffold0004 (68-137)||(111344-111413)
scaffold0004 (69-175)||(73032-73139)
[»] scaffold0139 (2 HSPs)
scaffold0139 (68-174)||(40160-40268)
scaffold0139 (68-152)||(23503-23587)
[»] scaffold0039 (1 HSPs)
scaffold0039 (41-141)||(9900-9999)
[»] scaffold0401 (1 HSPs)
scaffold0401 (41-144)||(8799-8901)
[»] scaffold0058 (1 HSPs)
scaffold0058 (68-171)||(59655-59757)
[»] scaffold0035 (2 HSPs)
scaffold0035 (68-181)||(43786-43899)
scaffold0035 (68-108)||(39094-39133)
[»] scaffold0098 (1 HSPs)
scaffold0098 (68-175)||(40052-40160)
[»] scaffold0086 (1 HSPs)
scaffold0086 (68-132)||(35185-35249)
[»] scaffold0337 (1 HSPs)
scaffold0337 (68-171)||(3155-3257)
[»] scaffold0092 (1 HSPs)
scaffold0092 (68-171)||(38441-38543)
[»] scaffold0385 (1 HSPs)
scaffold0385 (41-174)||(293-425)
[»] scaffold0048 (2 HSPs)
scaffold0048 (68-132)||(68725-68789)
scaffold0048 (44-87)||(57007-57050)
[»] scaffold0730 (1 HSPs)
scaffold0730 (61-132)||(6497-6568)
[»] scaffold0394 (1 HSPs)
scaffold0394 (68-171)||(7513-7615)
[»] scaffold0205 (1 HSPs)
scaffold0205 (68-171)||(5615-5718)
[»] scaffold1939 (1 HSPs)
scaffold1939 (68-175)||(74-180)
[»] scaffold0628 (1 HSPs)
scaffold0628 (45-96)||(1034-1085)
[»] scaffold0217 (1 HSPs)
scaffold0217 (68-175)||(28660-28766)
[»] scaffold0011 (1 HSPs)
scaffold0011 (41-174)||(33402-33534)
[»] scaffold0462 (2 HSPs)
scaffold0462 (125-174)||(1264-1313)
scaffold0462 (125-174)||(6770-6819)
[»] scaffold0148 (1 HSPs)
scaffold0148 (61-122)||(8843-8904)
[»] scaffold0083 (2 HSPs)
scaffold0083 (63-99)||(5039-5075)
scaffold0083 (63-99)||(10749-10785)
[»] scaffold0021 (2 HSPs)
scaffold0021 (63-171)||(17057-17163)
scaffold0021 (63-171)||(26588-26694)
[»] scaffold1800 (1 HSPs)
scaffold1800 (68-171)||(558-660)
[»] scaffold0149 (1 HSPs)
scaffold0149 (68-99)||(21633-21664)
[»] scaffold0059 (1 HSPs)
scaffold0059 (68-171)||(49680-49782)
[»] scaffold0020 (1 HSPs)
scaffold0020 (64-174)||(174169-174278)
[»] scaffold0120 (1 HSPs)
scaffold0120 (118-175)||(29257-29315)
[»] scaffold0183 (1 HSPs)
scaffold0183 (182-267)||(11227-11312)
[»] scaffold0461 (1 HSPs)
scaffold0461 (146-174)||(12433-12461)
[»] scaffold0184 (1 HSPs)
scaffold0184 (118-177)||(378-438)
[»] scaffold0165 (1 HSPs)
scaffold0165 (63-171)||(31880-31987)
[»] scaffold0112 (1 HSPs)
scaffold0112 (45-121)||(2889-2965)


Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 61 - 319
Target Start/End: Complemental strand, 25513911 - 25513653
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  25513911 atctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgtta 25513812  T
Q  161 tagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggatta 260  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25513811 tagaaattagggttagatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatta 25513712  T
Q  261 aattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 319  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25513711 aattggtgaagtataatgttgttgttgatgaattcacttctgattgatgttgtttttgt 25513653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 26446287 - 26446061
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||    
T  26446287 agcggtagaaccttgcgatcatctaacctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagt 26446188  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  26446187 tgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatatctttttctacttctacccataagtgcctatttgtat 26446088  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    |||||||||| |||||||| |||||||    
T  26446087 aaagtgattactgtggatttaattggt 26446061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 2424359 - 2424585
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||  |  ||| |||||||  |||||||||||||| ||||||||    
T  2424359 agcgttagaaccttgcgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagt 2424458  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  2424459 tgttattagttttgatgttatagaaattagggttcgatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtat 2424558  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||| |||||||    
T  2424559 aaagtgattattgtggatttaattggt 2424585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 14631188 - 14630991
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14631188 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 14631089  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||||||  ||||||||||||| |||||||| |||||||| ||| | |||||||||| |||||||||||||||||||||||||||| |||||||    
T  14631088 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 14630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 16296991 - 16296897
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttata 162  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  16296991 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgttata 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 9639075 - 9638954
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||||  || ||||||    
T  9639075 cgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttga 9638976  T
Q  156 tgttatagaaattagggttaga 177  Q
    |||| | | ||||||| |||||    
T  9638975 tgttttgggaattaggtttaga 9638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 35661002 - 35660906
Alignment:
Q  75 aagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagg 171  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||||||||||||||||  |||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattagg 35660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 26445940 - 26445877
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26445940 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 26445877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 33186968 - 33186850
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttg 154  Q
    |||| ||||||  ||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||  || ||||||    
T  33186968 cgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgttaataggttttg 33186869  T
Q  155 atgttatagaaattagggtt 174  Q
    ||||| ||| ||||||||||    
T  33186868 atgttgtag-aattagggtt 33186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 12424277 - 12424397
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattc--agaaaaagggtttaaccttgtagttgttctta-gttt 152  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||||||| |||||||||||  || ||||    
T  12424277 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttt 12424376  T
Q  153 tgatgttatagaaattagggtt 174  Q
    ||||||| ||| ||||||||||    
T  12424377 tgatgttgtag-aattagggtt 12424397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 15239815 - 15239927
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacc-ttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||||||||| |||||||||||||||||||||  || ||||| || |||||||||||||||| || |||||||  || ||||||| |||||||| |    
T  15239815 ctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaacctttatagttgtcgttggttttgaggttatagaga 15239914  T
Q  167 ttagggttagatt 179  Q
    |||||||||||||    
T  15239915 ttagggttagatt 15239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 2424706 - 2424769
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2424706 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatg 2424769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 9622542 - 9622434
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  9622542 ctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 9622444  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  9622443 attagggtta 9622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 55583249 - 55583141
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||   |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  55583249 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 55583151  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  55583150 attagggtta 55583141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 15747904 - 15747967
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  15747904 aaattggtgaagtataatgttgatgttgatgacttcacttctgattgttgttgtttttgttatg 15747967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 26921481 - 26921619
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacctt-gtag 139  Q
    ||||||| ||||||| ||| |||||||||||||||||||| |||||| | |||  |||| ||  || |  |||||| ||||||||||||||| || ||||    
T  26921481 agcggtataaccttgtgatcatctaacctaaggtaagggtaggactaaccttcattaatcataagtatg-taattctgaaaaagggtttaacatttgtag 26921579  T
Q  140 ttgttcttagttttgatgttatagaaattagggttagatt 179  Q
    ||||| ||||||||||||| ||||| ||||||||||||||    
T  26921580 ttgttgttagttttgatgtcatagagattagggttagatt 26921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 16025937 - 16025993
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 316  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16025937 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttt 16025993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 46741279 - 46741147
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| | |||| |||| ||    | | |||| | |||||||||||||||||||||||    
T  46741279 agcggtagaaccttgcgatcatctaacctaaggtaagtgtgggactaaccttctttaatcat-aaatatgtaatcctgaaaaagggtttaaccttgtagt 46741181  T
Q  141 tgtt-cttagttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  46741180 tgttaattggttttgatgttgtag-aattagggtt 46741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 13847258 - 13847193
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggttt 129  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||| |||||    
T  13847258 taacctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 45314124 - 45314193
Alignment:
Q  111 taattcagaaaaagggtttaacctt-gtagttgttcttagttttgatgttatagaaattagggttagatt 179  Q
    |||||| ||||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||    
T  45314124 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgttatagagattagggttagatt 45314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 14630870 - 14630814
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 316  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  14630870 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 14630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 14477684 - 14477578
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||||| |||| | |||| |||| ||| || | ||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||| |    
T  14477684 ctaaggtaagggtggcactaaccttctttaatcatgagtat-ataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgttatagaagt 14477586  T
Q  168 tagggtta 175  Q
    ||||||||    
T  14477585 tagggtta 14477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 10273442 - 10273388
Alignment:
Q  62 tctaacctaaggtaagggtgggactagctttctctaataatgggttttataattc 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10273442 tctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattc 10273388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 12623396 - 12623264
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || |||||||||||||||||||| | |||| |||| || ||| |  |||| | |||||||||||||||||||||||    
T  12623396 agcggtagaaccttgcgatcaatcaatctaaggtaagggtgggactaaccttctttaatcataggtatg-taatcctgaaaaagggtttaaccttgtagt 12623298  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  12623297 tgttaataggttttgatgttgtag-aattagggtt 12623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 17142942 - 17142882
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| ||||||||||||||||   ||||| ||||||||||||||||||||||||||||||    
T  17142942 aaattggtgaagtataatgttgttg---atgaactcacttctgattgttgttgtttttgttatg 17142882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 18463076 - 18462974
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||| |||||||||| | |||| |||| ||| || | ||||||| ||||||||||||||  |||||||||||  |||||||||||||||| || |    
T  18463076 ctaaggtaaaggtgggactaaccttctttaatcatgagtat-ataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttataaaagt 18462978  T
Q  168 tagg 171  Q
    ||||    
T  18462977 tagg 18462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 19622097 - 19622179
Alignment:
Q  182 attcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattg 265  Q
    ||||||||||||||||||| ||||||||||| |||  | |||||||||  ||||||||||||||||||||| || ||| |||||    
T  19622097 attcataatcttttgtata-tctctttttcttcttaaatccataagtgtttatttgtataaagtgattattatgaatttaattg 19622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 19080175 - 19080245
Alignment:
Q  184 tcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtg 255  Q
    ||||||||| |||||||||||||||| ||||||  |||||||||||| || ||||  |||||||||||||||    
T  19080175 tcataatctcttgtataatctctttt-ctacttaaacccataagtgcttaattgtgcaaagtgattattgtg 19080245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 19565890 - 19566022
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || ||||||||||||||| |||| | |||| |||| ||  || |  |||| | |||||||||||||||||||||||    
T  19565890 agcggtagaaccttgcgatcaatcaatctaaggtaagggtggtactaaccttctttaatcataagtatg-taatcctgaaaaagggtttaaccttgtagt 19565988  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  19565989 tgttaataggttttgatgttgtag-aattagggtt 19566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 15747787 - 15747848
Alignment:
Q  83 gactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||| ||||||||||  ||| ||| |||||||| ||||||||||||||| |||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgtt 15747848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 10237422 - 10237454
Alignment:
Q  282 ttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||||||||||||||||||||||||||||||    
T  10237422 ttgttgatgaattcacttctgattgttgttgtt 10237454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 17143063 - 17142999
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||| |||||||||||||  ||| ||| |||||||| ||||| ||||||||| |||||||||||    
T  17143063 tgggaatagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgtt 17142999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 20150829 - 20150771
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||| ||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  20150829 gaaaaaggatttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 20150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 26014360 - 26014318
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggacta 87  Q
    |||||||||| |||| |||||| ||||||||||||||||||||    
T  26014360 gtagaaccttccgatcatctaatctaaggtaagggtgggacta 26014318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 16296847 - 16296819
Alignment:
Q  146 ttagttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||||    
T  16296847 ttagttttgatgttatagaaattagggtt 16296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 21062695 - 21062663
Alignment:
Q  67 cctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||||| |||||||||||    
T  21062695 cctaaggtaagggtgggactaactttctctaat 21062663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 6e-99; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 43745736 - 43745510
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||    
T  43745736 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagt 43745637  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43745636 tgttgttagttttgatgttatagaaattagagttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtat 43745537  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||| |||||||    
T  43745536 aaagtgattattgtggatttaattggt 43745510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 15575648 - 15575839
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  15575648 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttatagaaat 15575747  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggatt 259  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  15575748 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgtggatt 15575839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 47095505 - 47095306
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||    
T  47095505 ctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttatagaaat 47095406  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  47095405 tagggttaaatttcattcataatcttttgtataaactctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 47095306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 48212702 - 48212927
Alignment:
Q  44 ggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaa--gggtttaaccttgtagtt 141  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||| ||| ||||  |||||  ||||||||| ||||| ||    
T  48212702 ggtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaatt 48212801  T
Q  142 gttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtata 241  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||    
T  48212802 gttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccaaaagtgtctatttgtata 48212901  T
Q  242 aagtgattattgtggattaaattggt 267  Q
    |||||||||||||||||| |||||||    
T  48212902 aagtgattattgtggatttaattggt 48212927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 41 - 259
Target Start/End: Original strand, 4690635 - 4690851
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||  |  ||| |||||||| |||||||||||||||||||||||    
T  4690635 agcgatagaaccttgcgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagt 4690734  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||    
T  4690735 tgttattacttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctcattttctacttctacccataagt--ctatttgtat 4690832  T
Q  241 aaagtgattattgtggatt 259  Q
    |||||||||||| ||||||    
T  4690833 aaagtgattattatggatt 4690851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 20252181 - 20252381
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  20252181 ctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttatagaaat 20252280  T
Q  168 tagggttagat----ttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaat 263  Q
    |||| ||||||    || ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||    
T  20252281 taggattagatttcattcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaat 20252380  T
Q  264 t 264  Q
    |    
T  20252381 t 20252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 18874664 - 18874859
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaa--gggtttaaccttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| |   ||||||||||||||||||    
T  18874664 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgtagttggt---agttttgatgttatagaa 18874760  T
Q  166 attagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattg 265  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  18874761 attagggttagatttcattcataatcttttgtataatctcttttt---cttctacccataagtgcctatttgtataaagtgattattgtggatttaattg 18874857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 16186925 - 16186808
Alignment:
Q  109 tataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctcttt 208  Q
    |||||||| |||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16186925 tataattctgaaaaagggtttaaccttatggttgttagtagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctcttt 16186826  T
Q  209 ttctacttccacccataa 226  Q
    |||| |||| ||||||||    
T  16186825 ttcttcttctacccataa 16186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 708428 - 708537
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  708428 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttataggaat 708527  T
Q  168 tagggttaga 177  Q
    |||| |||||    
T  708528 taggtttaga 708537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 19195676 - 19195562
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  19195676 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctg-aaaagggtttaaccttgtagttgttgttagttttga 19195578  T
Q  156 tgttatagaaattagg 171  Q
    |||||||| |||||||    
T  19195577 tgttataggaattagg 19195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 8513748 - 8513828
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  8513748 taacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 8488089 - 8488169
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||    
T  8488089 taacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtt 8488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 58400 - 58517
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||| | ||| ||| || ||||||||||    
T  58400 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttga 58497  T
Q  156 tgttatagaaattagggtta 175  Q
    ||||| ||||||||||||||    
T  58498 tgttaaagaaattagggtta 58517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 4690980 - 4691043
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4690980 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 4691043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 43745389 - 43745326
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43745389 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 43745326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 13744502 - 13744614
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||| | ||| ||| || ||| |||| ||||||    
T  13744502 atctaatctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaa-catgttgtt-ttgttatttttaatgtta 13744599  T
Q  161 tagaaattagggtta 175  Q
    |||||||||||||||    
T  13744600 tagaaattagggtta 13744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 38299808 - 38299738
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaa 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38299808 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 831981 - 832044
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831981 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 832044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 1197161 - 1197224
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1197161 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 1197224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 25943319 - 25943213
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttct-tagttttgatgttatagaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||  ||||| ||||||||| || | |||||| | |||||||||||||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatt-tcgttgttttgtagttttgatgttatagaaat 25943221  T
Q  168 tagggtta 175  Q
    ||||||||    
T  25943220 tagggtta 25943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 34958265 - 34958202
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34958265 aaattggtgaagtataatgttgttgttgatgaattcacttttgattgttgttgtttttgttatg 34958202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 43276731 - 43276848
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttg 154  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| ||||||||||||||||||||  || ||||||    
T  43276731 cgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgttaataggttttg 43276829  T
Q  155 atgttatagaaattagggtt 174  Q
    ||||| ||| ||||||||||    
T  43276830 atgttgtag-aattagggtt 43276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 47095185 - 47095123
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttat 322  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47095185 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgttat 47095123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 8930757 - 8930872
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgt 158  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||    
T  8930757 atctaatctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgt 8930855  T
Q  159 tatagaaattagggtta 175  Q
    |||||||||||||||||    
T  8930856 tatagaaattagggtta 8930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 15700734 - 15700840
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||| ||  |||||||||||||||||||||||| |||  |||  |||| ||||||||| | ||||||||| |||||||| |||||||||||||    
T  15700734 ctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaacat-gtagttgttgttagttttaatgttatagaaat 15700832  T
Q  168 tagggtta 175  Q
    ||||||||    
T  15700833 tagggtta 15700840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 48213032 - 48213095
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48213032 aaattgatgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgttatg 48213095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 33556104 - 33556211
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||| |||||||||||||||    
T  33556104 ctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttag-tttgatgttatagaa 33556201  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  33556202 attagggtta 33556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 15720831 - 15720724
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||| ||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||||||||||    
T  15720831 taaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 15720733  T
Q  167 ttagggtta 175  Q
    ||| |||||    
T  15720732 ttatggtta 15720724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 16250221 - 16250285
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||  |||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaac 16250285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 13315074 - 13315145
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||| ||| |||| ||||| |||||||||    
T  13315074 atctaatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaac 13315145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 18079617 - 18079671
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||    
T  18079617 aaattggtgaaatataatgttattgttgatgaattcacttctgattgttgttgtt 18079671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 36300640 - 36300745
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||| ||||  |||| ||||||||| |  ||  | || |||||||||||| ||||| |||    
T  36300640 ctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttgatgatataggaat 36300737  T
Q  168 tagggtta 175  Q
    ||||||||    
T  36300738 tagggtta 36300745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 3287797 - 3287743
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaa 122  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||||| |||||    
T  3287797 ctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 18570700 - 18570592
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||| ||||||||||||||||||||||||| ||  ||||   ||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  18570700 ctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaacatattgttgtt-ttgttagttttgatgttatagaa 18570602  T
Q  166 attagggtta 175  Q
     ||| |||||    
T  18570601 gttatggtta 18570592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 19283121 - 19283051
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaaggg 126  Q
    |||| ||||||  ||||||||||||| ||||| |||||||||| |||||||| |||||||| |||||||||    
T  19283121 cgatcatctaatttaaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 34958386 - 34958322
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||  ||| ||| |||||||| |||||||| |||||| |||||||||||    
T  34958386 tgggactagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgtt 34958322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 42565872 - 42565934
Alignment:
Q  109 tataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagg 171  Q
    |||||||| |||||||||||||| ||||||||||||  || ||||| |||||||||| |||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgttatagaagttagg 42565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 831861 - 831925
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||||||| |||||||||  ||||||| || |||||  |||||||||||||| |||||||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgtt 831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 1197041 - 1197105
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||||||| |||||||||  ||||||| || |||||  |||||||||||||| |||||||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgtt 1197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 16368271 - 16368354
Alignment:
Q  169 agggttagatttgattcataatctt-ttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattatt 252  Q
    |||||||| ||| |||||||||||| ||||||||||| |||| ||||||| |||||||||||| || ||||  ||| ||||||||    
T  16368271 agggttagttttcattcataatcttcttgtataatctatttt-ctacttctacccataagtgcttaattgtgcaaattgattatt 16368354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 4071877 - 4071842
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  4071877 taacctaaggtaagggtgggactaactttctctaat 4071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 12127150 - 12127193
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  12127150 cgatcatctaatctaaggtaagggtgggactaactttctctaat 12127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 12754607 - 12754642
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  12754607 taacctaaggtaagggtgggactaactttctctaat 12754642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 33060491 - 33060389
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||| || | ||||||| | ||||||||||||  |||| ||||||  || ||||||||| |||||| |    
T  33060491 ctaaggtaagggtgggactaaccttctttaatcatgagtct-ataattctggaaaagggtttaattttgttgttgtttataattttgatgtaatagaagt 33060393  T
Q  168 tagg 171  Q
    ||||    
T  33060392 tagg 33060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 35771436 - 35771471
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  35771436 taacctaaggtaagggtgggactaactttctctaat 35771471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 9743127 - 9743183
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgtt-cttagttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||  | |||||||||||| ||| ||||||||||    
T  9743127 gaaaaagggtttaaccttgtagttgttaataagttttgatgttgtag-aattagggtt 9743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 15119355 - 15119411
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttag-ttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||    
T  15119355 gaaaaagggtttaaccttgtagttgttaatagattttgatgttgtag-aattagggtt 15119411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 15700887 - 15700951
Alignment:
Q  73 gtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgt 137  Q
    ||||||| | ||||||||||||||||||||| ||| ||| ||||  |||| ||||||||| ||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgt 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 16496214 - 16496154
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaattagggttaga 177  Q
    |||||| |||||||||||||||||||  |||| ||||| | ||| ||||||||||||||||    
T  16496214 gaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 16496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 18355 - 18129
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  18355 agcggtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagt 18256  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| || |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  18255 tgttgttggttttgattttatagaaattagggttagatttcattcataatcttctgtataatctctttttctacttctacccataagtgcttatttgtat 18156  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||| ||||||||||||||| |||||||    
T  18155 aaaatgattattgtggatttaattggt 18129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 21514771 - 21514545
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||  ||||||||||||||||||||||    
T  21514771 agcggtagaaccttgcgatcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagt 21514672  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  21514671 tgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttatacttctacccataagtgcctatttgtat 21514572  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||| |||||||    
T  21514571 aaagtgattattgtggatttaattggt 21514545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 69 - 267
Target Start/End: Original strand, 18816295 - 18816493
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaatt 168  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 18816394  T
Q  169 agggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||| |||||||    
T  18816395 agggttagatttcattcataatcttttgtataatctctttttctacttctactcataagtgtctatttgtataaagtgattattgtggatttaattggt 18816493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 45 - 267
Target Start/End: Original strand, 4380593 - 4380807
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  |  ||| |||||||| |||||||||||||||||||||||||||    
T  4380593 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 4380692  T
Q  145 cttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaag 244  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      |||  || |||||||||||||    
T  4380693 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttc------taa--gcctatttgtataaag 4380784  T
Q  245 tgattattgtggattaaattggt 267  Q
    ||||||||||| ||| |||||||    
T  4380785 tgattattgtgaatttaattggt 4380807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 36732384 - 36732514
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  36732384 agcggtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagt 36732483  T
Q  141 tgttcttagttttgatgttatagaaattagg 171  Q
    |||| |||||||||||||||||| |||||||    
T  36732484 tgttgttagttttgatgttataggaattagg 36732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 22208334 - 22208216
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttg 154  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||  || ||||||    
T  22208334 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttg 22208235  T
Q  155 atgttatagaaattagggtt 174  Q
    ||||| ||| ||||||||||    
T  22208234 atgttgtag-aattagggtt 22208216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 12577932 - 12577826
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacc-ttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||||||||||||||| ||||||||||||||  ||| |||||||| |||||||||||||||| || |||||||| ||||||||||||||||||| |    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagaga 12577834  T
Q  167 ttagggtt 174  Q
    ||||||||    
T  12577833 ttagggtt 12577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 21676592 - 21676702
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||  |||| |||||||||| |||||||||||  |||||||||| ||||||||||    
T  21676592 ctaaggtaagggtgggactagctt-ctctaataatgggttt-ataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaat 21676689  T
Q  168 tagggttagattt 180  Q
    |||| ||| ||||    
T  21676690 taggtttaaattt 21676702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 38185044 - 38185107
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38185044 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 38185107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 21399770 - 21399662
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  21399770 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21399672  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  21399671 attagggtta 21399662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 21794263 - 21794155
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  21794263 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21794165  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  21794164 attagggtta 21794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 18023653 - 18023716
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18023653 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatg 18023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 20494632 - 20494695
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20494632 aaattggtgaagtataatattgttgttgatgaattcacttctgattgttgttgtttttgttatg 20494695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 21678845 - 21678946
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||  |||| |||||||||| |||||||||||  |||||||||| |||||| |||    
T  21678845 ctaaggtaagggtgggactagctt-ctctaataatgggttt-ataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaat 21678942  T
Q  168 tagg 171  Q
    ||||    
T  21678943 tagg 21678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 22258293 - 22258403
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttg 154  Q
    |||| ||||||  ||||||||||||| ||||||||||||||||||||| ||| ||||||||  |||||||||||||||||| |||||||  || ||||||    
T  22258293 cgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttttg 22258392  T
Q  155 atgttatagaa 165  Q
    ||||| |||||    
T  22258393 atgttgtagaa 22258403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 18834487 - 18834371
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||| || ||| ||||  |||| |||||||| | ||| ||| || ||||||||||    
T  18834487 cgatcatctaatttaaggtaagggtgggactagctttctctaataatggattgtatgattc-taaaaggggtttaa-catgttgtt-ttgttagttttga 18834391  T
Q  156 tgttatagaaattagggtta 175  Q
    ||||||||||||||||||||    
T  18834390 tgttatagaaattagggtta 18834371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 21514424 - 21514361
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  21514424 aaattggtgaagtataatgttgttgttgatgaatttacttctgattgttgttgtttttattatg 21514361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 22345224 - 22345153
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  22345224 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22345153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 22356884 - 22356813
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  22356884 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22356813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 22483834 - 22483775
Alignment:
Q  73 gtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 5761611 - 5761555
Alignment:
Q  43 cggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5761611 cggtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaat 5761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 21676499 - 21676585
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgat 156  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||  |||| |||||||||| |||||||||||  ||||||||||    
T  21676499 ctaaggtaagggtgggactagctt-ctctaataatgggttt-ataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 18023567 - 18023631
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgtt 18023631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 22610266 - 22610371
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||| ||||  |||| ||||||||| |  ||  | || ||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttgatgttatagaaat 22610363  T
Q  168 tagggtta 175  Q
    || |||||    
T  22610364 tatggtta 22610371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 17978388 - 17978520
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||   |||| |||| ||  | | | |||| | |||||||| ||||||||||||||    
T  17978388 agcggtagaaccttgcgatcatctaaactaaggtaagggtgggactaaacttctataatcataag-tatgtaatcctgaaaaaggatttaaccttgtagt 17978486  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  17978487 tgttaataggttttgatgttgtag-aattagggtt 17978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 23884229 - 23884116
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt--tgttcttagttttgatgt 158  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||| ||| ||||  |||| |||||||| | ||| ||  | || |||||||||||||    
T  23884229 atctaatctaaggtaagggcgggactagctttctcta--aatgggttgtatgattctaaaaaggggtttaa-catgttgttcttttgttagttttgatgt 23884133  T
Q  159 tatagaaattagggtta 175  Q
    |||||||||||||||||    
T  23884132 tatagaaattagggtta 23884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 38184923 - 38184984
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagtt 141  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagtt 38184984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 22474836 - 22474704
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || |||||||||||||||||||| | |||| |||| ||  || |  |||| | |||||||||||||||||||||||    
T  22474836 agcggtagaaccttgcgatcaatcaatctaaggtaagggtgggactaaccttctttaatcataagtatg-taatcctgaaaaagggtttaaccttgtagt 22474738  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  22474737 tgttaataggttttgatgttgtag-aattagggtt 22474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 22366123 - 22366072
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||||| ||||||||||||||||   |||||||||||||||||||||||||||    
T  22366123 aaattggtgaagtataatgttgttg---atgaattcacttctgattgttgttgtt 22366072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 36306062 - 36305988
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaa 131  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||  |||| ||| |||| |||||||| |||||    
T  36306062 cgatcatctaatctaaggtaagggtgagactagctttctctaataa-cggttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 20022016 - 20022070
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||| ||| |||| |||||| |||||||||||||||||||| |||||||||||    
T  20022016 gtagaatcttccgatcatctaatctaaggtaagggtgggactaactttctctaat 20022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 22483990 - 22483927
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||| | ||||||| ||||||||||||||| ||| ||||||||  ||||||||||||||    
T  22483990 ctaaggtaagcg-gggactaactttctctaataatgagttgtataattcttaaaaagggtttaac 22483927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 17906844 - 17906879
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  17906844 taacctaaggtaagggtgggactaactttctctaat 17906879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 22723305 - 22723251
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||| | ||||||  |||| ||||||||||||||||||||||||||| |||||    
T  22723305 aaattgatgaagtattttgttattgttgatgaattcacttctgattgtttttgtt 22723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 22966814 - 22966756
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||||||||||||||||||||||  || |||||||||||| ||  ||||||||||    
T  22966814 gaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagcgattagggtta 22966756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 21579254 - 21579310
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  21579254 gaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtag-aattagggtt 21579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 21697509 - 21697566
Alignment:
Q  119 aaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||||||||| |||||||||||  || |||||||||||| ||| ||||||||||    
T  21697509 aaaaagggtttaacattgtagttgttaataggttttgatgttaaagagattagggtta 21697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 12037212 - 12037260
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttag-ttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||  ||| |||||||||| |||||    
T  12037212 gaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaa 12037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 24907915 - 24907883
Alignment:
Q  282 ttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||||||||||||||| ||||||||||||||    
T  24907915 ttgttgatgaattcacttttgattgttgttgtt 24907883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 29762916 - 29762964
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgtt-cttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||  | |||||||||||| |||||    
T  29762916 gaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa 29762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 8e-92; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 660868 - 660644
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  660868 agcggtagaaccttgcgatcatctaacctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaagg-tttaaccttgtagt 660771  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  660770 tgttgttagttttgatgttatagaaatttgggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtat 660671  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||| |||||||    
T  660670 aaagtgattattgtggatttaattggt 660644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 56 - 267
Target Start/End: Original strand, 23199194 - 23199405
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||||    
T  23199194 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttga 23199293  T
Q  156 tgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtg 255  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  23199294 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgcctatttgtataaagtgattattgtg 23199393  T
Q  256 gattaaattggt 267  Q
    |||| |||||||    
T  23199394 gatttaattggt 23199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 18744927 - 18744765
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 18744828  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgc 230  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18744827 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgc 18744765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 73 - 267
Target Start/End: Original strand, 1627071 - 1627266
Alignment:
Q  73 gtaagggtgggactagctttctctaataatgggttttataattc-agaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagg 171  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||| ||||||| || || ||||||||||||||||||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagg 1627170  T
Q  172 gttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  1627171 gttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatgtgtataaagtgattattgtggatttaattggt 1627266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 16063804 - 16063701
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |||    
T  16063804 ctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataggaat 16063705  T
Q  168 tagg 171  Q
    ||||    
T  16063704 tagg 16063701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 32607303 - 32607423
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagtttt 153  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||    
T  32607303 cgattatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 32607401  T
Q  154 gatgttatagaaattagggtta 175  Q
    ||||||||||||||||| ||||    
T  32607402 gatgttatagaaattagagtta 32607423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 6551289 - 6551392
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||| |||||||||||  |  ||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttataggaat 6551388  T
Q  168 tagg 171  Q
    ||||    
T  6551389 tagg 6551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 1627387 - 1627450
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1627387 aaattgatgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 1627450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 18744614 - 18744558
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 316  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18744614 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 18744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 1626890 - 1626992
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| ||  | | | |||| | |||||||||||||||||||||||    
T  1626890 agcggtagaaccttgcgattatctaacctaaggtaagggtgtgactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagt 1626988  T
Q  141 tgtt 144  Q
    ||||    
T  1626989 tgtt 1626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 21398631 - 21398752
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttg--ttcttagtttt 153  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||  |||| ||| || | | |||  |||  || ||||||||    
T  21398631 cgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaagggggtttaacatgtttttgttttgttagtttt 21398730  T
Q  154 gatgttatagaaattagggtta 175  Q
    ||||||||||||||||||||||    
T  21398731 gatgttatagaaattagggtta 21398752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 14025779 - 14025881
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| | |||| |||| ||  | | | |||| | |||||||||||||||||||||||    
T  14025779 agcggtagaaccttgcgatcatctaatctaaggtaagggtgggactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagt 14025877  T
Q  141 tgtt 144  Q
    ||||    
T  14025878 tgtt 14025881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 175
Target Start/End: Complemental strand, 26750111 - 26749978
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| | || | |||| ||  | | |||||| | ||||| |||||||||||||||||    
T  26750111 agcggtagaaccttgcgatcatctaacctaaggtaagggtgagactaaccttttttaatcataag-tatataatcctgaaaaggggtttaaccttgtagt 26750013  T
Q  141 tgtt-cttagttttgatgttatagaaattagggtta 175  Q
    ||||  | |||||||||||| ||| |||||||||||    
T  26750012 tgttaataagttttgatgttgtag-aattagggtta 26749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 21504143 - 21504080
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggttagatttg 181  Q
    ||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| |||||    
T  21504143 gaaaaagggtttaagtttgtagttgttagtagttttgatgttatagaaattagggttaaatttg 21504080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 660506 - 660463
Alignment:
Q  280 tgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  660506 tgttgttgatgaattaacttctgattgttgttgtttttgttatg 660463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 8833182 - 8833310
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||||||||||||| |||||||||| |||||||||||||||  | |||| |||| ||  | | | |||| | |||||||||||||||||| ||||||||    
T  8833182 gtagaaccttgcgatcatctaacctagggtaagggtgggactgaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttatagttgtt 8833280  T
Q  145 ctta-gttttgatgttatagaaattagggtt 174  Q
      || ||||||||||| ||| ||||||||||    
T  8833281 aataggttttgatgttgtag-aattagggtt 8833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 20313328 - 20313266
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||| |||| ||||||||||    
T  20313328 ctaaggtaagggtgggactagc-ttctctaatagtggg-tttataattctgaaatagggtttaac 20313266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 26762459 - 26762350
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttata 162  Q
    |||||||||||||||||||||||| | |||| |||| ||   || | |||| | |||||||||||||||||||||||||||  || ||||||||||| ||    
T  26762459 taacctaaggtaagggtgggactaaccttctttaatcataa-ttatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgta 26762361  T
Q  163 gaaattagggtt 174  Q
    | ||||||||||    
T  26762360 g-aattagggtt 26762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 24068233 - 24068175
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  24068233 gaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 24068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 21300036 - 21300074
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  21300036 atctaatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 175
Target Start/End: Complemental strand, 22111952 - 22111923
Alignment:
Q  146 ttagttttgatgttatagaaattagggtta 175  Q
    ||||||||||||||||||||||||||||||    
T  22111952 ttagttttgatgttatagaaattagggtta 22111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 21398800 - 21398904
Alignment:
Q  73 gtaagggtgggactagctttctctaataatgggttttataattcagaaaaa-gggtttaacctt----gtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||||| | |||| |||| ||| || | ||||||| |||||| ||||||||||||    || |||||| ||||||||||||||||||| |     
T  21398800 gtaagggtgggactaaccttctttaatcatgagtgt-ataattctgaaaaaagggtttaacctttgttgttgttgttgttagttttgatgttatagagaa 21398898  T
Q  168 tagggt 173  Q
    ||||||    
T  21398899 tagggt 21398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 31622177 - 31622117
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaa 121  Q
    |||||| ||||||||||||||||| || |||||||||||  | |||| |||||||| ||||    
T  31622177 atctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 31622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 24719483 - 24719708
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24719483 agcggtagaaccttgcgatcatctaacctatggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagt 24719581  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  24719582 tgttattagttttgatgttatagaaattaaggttaaatttcattcataatcttttgtataatctttttttctacttctacccataagtgcctatttgtat 24719681  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||||| ||||||||||| |||||||    
T  24719682 aaagtgactattgtggatttaattggt 24719708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 61 - 265
Target Start/End: Original strand, 28476726 - 28476930
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28476726 atctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 28476825  T
Q  161 tagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggatta 260  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||     
T  28476826 tagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggattt 28476925  T
Q  261 aattg 265  Q
    |||||    
T  28476926 aattg 28476930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 12710927 - 12710759
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| ||||||||| | ||||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  12710927 atctaatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgtta 12710828  T
Q  161 tagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtg 229  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  12710827 tagaaattaaggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg 12710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 38056671 - 38056780
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| | | |||    
T  38056671 ctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttttgggaat 38056770  T
Q  168 tagggttaga 177  Q
    |||| |||||    
T  38056771 taggtttaga 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 50544925 - 50544841
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttt 152  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  50544925 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 24007224 - 24007330
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacctt-gtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||||||||||||||||| ||||||  || |||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||| |    
T  24007224 ctaaggtaagggtgggactagctttctctgataatga-ttgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgttatagaga 24007322  T
Q  167 ttagggtt 174  Q
    ||||||||    
T  24007323 ttagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 22145666 - 22145752
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||| |||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtttga 22145752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 8306671 - 8306552
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagtttt 153  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||  |||| |||||||||   |||| ||| || ||||||||    
T  8306671 cgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagtttt 8306573  T
Q  154 gatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||    
T  8306572 gatgttatagaaattagggtt 8306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 8275987 - 8276097
Alignment:
Q  67 cctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||| |||||||||| |||||||||| ||  |||||||| |||||||||||||||||||||||||||  || |||||||||| | | ||    
T  8275987 cctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttgatatttttgatgttttgggaa 8276086  T
Q  167 ttagggttaga 177  Q
    ||||| |||||    
T  8276087 ttaggtttaga 8276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 28477053 - 28477114
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtta 321  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28477053 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtta 28477114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 34392821 - 34392713
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  34392821 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 34392723  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  34392722 attagggtta 34392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 17901793 - 17901857
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17901793 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 17901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 14792535 - 14792637
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||| ||  | | | |||| | |||||||||||||||||||||||    
T  14792535 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagt 14792633  T
Q  141 tgtt 144  Q
    ||||    
T  14792634 tgtt 14792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 39061373 - 39061268
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||| ||||||||| | |||| |||| ||| || | ||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||| |    
T  39061373 ctaaggtaagagtgggactaaccttctgtaatcatgagtat-ataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgttatagaatt 39061275  T
Q  168 tagggtt 174  Q
    |||||||    
T  39061274 tagggtt 39061268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 20588690 - 20588581
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattc--agaaaaagggtttaac--cttgtagttgttcttagttttgatgttataga 164  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||  | ||||||||||||||   || | ||| || |||||||||||||||||||    
T  20588690 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgtt-ttgttagttttgatgttataga 20588592  T
Q  165 aattagggtta 175  Q
    |||||||||||    
T  20588591 aattagggtta 20588581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 20593228 - 20593119
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattc--agaaaaagggtttaac--cttgtagttgttcttagttttgatgttataga 164  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||  | ||||||||||||||   || | ||| || |||||||||||||||||||    
T  20593228 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgtt-ttgttagttttgatgttataga 20593130  T
Q  165 aattagggtta 175  Q
    |||||||||||    
T  20593129 aattagggtta 20593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 18121683 - 18121559
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || | |||| |||| ||  | | | |||| | |||||||| ||||||||||||||    
T  18121683 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggattaaccttctttaatcataag-tatgtaatcctgaaaaaggatttaaccttgtagt 18121585  T
Q  141 tgttctta-gttttgatgttatagaa 165  Q
    ||||  || ||||||||||| |||||    
T  18121584 tgttaataggttttgatgttgtagaa 18121559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 45499595 - 45499487
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||   ||| |||||||||   |||| ||| || |||||||| | |||||||||    
T  45499595 ctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaacatgttgttgtt-ttgttagttttaacgttatagaa 45499497  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  45499496 attagggtta 45499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 635003 - 635064
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggttt 129  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||  |||||||||||    
T  635003 ctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 6834229 - 6834165
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||  |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  6834229 ctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaac 6834165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 35895159 - 35895088
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||| |||| ||||||||||| |||||||||||||| ||| |||| |||||||| ||||||    
T  35895159 atctaatctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaac 35895088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 44892529 - 44892427
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| | |||| |||| ||  | | | ||||   |||||||| ||||||||||||||    
T  44892529 agcggtagaaccttgcgatcatctaacctaagttaagggtgggactaaccttctttaatcataag-tatgtaatcttgaaaaaggatttaaccttgtagt 44892431  T
Q  141 tgtt 144  Q
    ||||    
T  44892430 tgtt 44892427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 7703175 - 7703135
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttt 108  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  7703175 ctaaggtaagggtgggactagctttctctaataatgagttt 7703135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 16401963 - 16401902
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||||||| | ||||||||||||||| |||||||||| |||| ||||||||||    
T  16401963 taaggtaagggtgggactaac-ttctctaataatggg-tttataattctgaaatagggtttaac 16401902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 20708058 - 20708163
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| ||| | || ||| |||||||| ||||||||| ||||| |||  ||||||  || || |||||||| ||||||    
T  20708058 ctaaggtaagggtgggactaaccttctttaaca-tgagttctataattctgaaaaaggggttaactttgatgttgttgataattgtgatgttaaagaaat 20708156  T
Q  168 tagggtt 174  Q
    |||||||    
T  20708157 tagggtt 20708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 24723323 - 24723381
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||| |   || |||||||||||||||||||| |||||||||||    
T  24723323 agcggtagaaccttgcgatcaatcaatctaaggtaagggtgggactaactttctctaat 24723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 38887059 - 38887191
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    |||||||||| |||| ||| |||||||||||||||||||||  |||| | |||| |||| ||  | | | |||| | |||||||||||||| ||||||||    
T  38887059 agcggtagaaacttgtgatcatctaacctaaggtaagggtgaaactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaatcttgtagt 38887157  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  38887158 tgttaataggttttgatgttgtag-aattagggtt 38887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 40390154 - 40390096
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  40390154 gaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagatattagggtta 40390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 21188033 - 21188135
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | || | |||| ||| || | ||||||  || ||||| |||||  |||||||||||  ||||||||||||||||||| |    
T  21188033 ctaaggtaagggtgggactaaccttttttaatcatgagtat-ataattttgagaaaggatttaattttgtagttgttgatagttttgatgttatagaagt 21188131  T
Q  168 tagg 171  Q
    ||||    
T  21188132 tagg 21188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 20822763 - 20822729
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaatt 294  Q
    |||||||| ||||||||||||||||||||||||||    
T  20822763 aaattggtgaagtataatgttgttgttgatgaatt 20822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 14294859 - 14294919
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaattagggttaga 177  Q
    |||||| |||||||||||||||||||  |||| ||||| | ||| ||||||||||||||||    
T  14294859 gaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 14294919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 20822726 - 20822698
Alignment:
Q  286 tgatgaattcacttctgattgttgttgtt 314  Q
    |||||||||||||||||||||||||||||    
T  20822726 tgatgaattcacttctgattgttgttgtt 20822698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 51131377 - 51131317
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaattagggttaga 177  Q
    |||||| |||||||||||||||||||  |||| ||||| | ||| ||||||||||||||||    
T  51131377 gaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 51131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 21315475 - 21315674
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21315475 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21315574  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  21315575 tattgttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 21315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 21335265 - 21335464
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21335265 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21335364  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| |||| |||||||    
T  21335365 tatggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtagatttaattggt 21335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 56 - 267
Target Start/End: Complemental strand, 21369358 - 21369147
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||  | ||||||||||    
T  21369358 cgatcatctaatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttga 21369259  T
Q  156 tgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtg 255  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| ||  ||||||||||||||||||||||||    
T  21369258 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctactactacccataaatgtctatttgtataaagtgattattgtg 21369159  T
Q  256 gattaaattggt 267  Q
    |||| |||||||    
T  21369158 gatttaattggt 21369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 43 - 267
Target Start/End: Complemental strand, 23610704 - 23610474
Alignment:
Q  43 cggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttg 142  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||||||||| ||||||    
T  23610704 cggtagaaccttgcgaacatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttg 23610605  T
Q  143 ttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataa------tctctttttctacttccacccataagtgcatattt 236  Q
    || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||      | | |||||||||||| |||||||||||| |||||    
T  23610604 ttgtttgttttgatgttatagaaattagggttagatttaattcataatcttttgtataaagtgattatgtttttctacttctacccataagtgcctattt 23610505  T
Q  237 gtataaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||| ||| |||||||    
T  23610504 gtataaagtgattattgtgaatttaattggt 23610474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 149488 - 149610
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattc---agaaaaagggtttaac--cttgtagttgttcttagt 150  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||   | |||| |||||||||   |||| ||| || |||||    
T  149488 cgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagt 149586  T
Q  151 tttgatgttatagaaattagggtt 174  Q
    ||||||||||||||||||||||||    
T  149587 tttgatgttatagaaattagggtt 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 28652593 - 28652662
Alignment:
Q  111 taattcagaaaaagggtttaacctt-gtagttgttcttagttttgatgttatagaaattagggttagatt 179  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttatagaaattagggttagatt 28652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 23801556 - 23801485
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||    
T  23801556 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 23801485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 20005970 - 20006072
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||| |||| |||| ||| || | ||||||| ||||||||||||||  |||| ||||||  || |||||||||||||||| |    
T  20005970 ctaaggtaagggtgggactagccttctttaatcatgagtct-ataattctgaaaaagggtttaattttgttgttgttaataattttgatgttatagaagt 20006068  T
Q  168 tagg 171  Q
    ||||    
T  20006069 tagg 20006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 28344987 - 28345092
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||| ||||  |||| |||||||| | ||| ||| || ||||||| ||||||||||||||    
T  28344987 ctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagtttcgatgttatagaaat 28345084  T
Q  168 tagggtta 175  Q
    ||||||||    
T  28345085 tagggtta 28345092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 19201172 - 19201230
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||    
T  19201172 agcggtagaaccttgcgatcatctaacctaagttaagggtgagactaactttctctaat 19201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 25584302 - 25584367
Alignment:
Q  109 tataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtt 174  Q
    |||||||| |||||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||    
T  25584302 tataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgttatagaagttagggtt 25584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 34491239 - 34491350
Alignment:
Q  68 ctaaggtaagggtgggactagctttctct-aataatgggttttataattcagaaaaagggtttaaccttgtagttgttct----tagttttgatgttata 162  Q
    |||||||||||||||||||||| |||||| ||||| | ||| |||||||| ||||||||||||||| | || |||||| |    ||||||||||||||||    
T  34491239 ctaaggtaagggtgggactagc-ttctctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttgttttgtagttttgatgttata 34491337  T
Q  163 gaaattagggtta 175  Q
     || |||||||||    
T  34491338 aaatttagggtta 34491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 19647246 - 19647180
Alignment:
Q  109 tataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtta 175  Q
    |||||||| |||||||||||||| ||||||||||||  ||||||||||  ||||||| |||||||||    
T  19647246 tataattctgaaaaagggtttaatcttgtagttgttaatagttttgattgtatagaagttagggtta 19647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 17307551 - 17307508
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtgggactaactttctctaat 17307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 22502036 - 22501993
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  22502036 cgatcatctaatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 22509970 - 22509927
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  22509970 cgatcatctaatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 45535978 - 45535876
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| | | || | ||||||| |||||||||||||| ||||| ||||||  || || || |||||||||| |    
T  45535978 ctaaggtaagggtgggactaaccttctttaatcacgagtct-ataattctgaaaaagggtttaatcttgttgttgttgataattctgttgttatagaagt 45535880  T
Q  168 tagg 171  Q
    ||||    
T  45535879 tagg 45535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 175
Target Start/End: Original strand, 25584189 - 25584218
Alignment:
Q  146 ttagttttgatgttatagaaattagggtta 175  Q
    ||||||||||||||||||||||||||||||    
T  25584189 ttagttttgatgttatagaaattagggtta 25584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 314
Target Start/End: Complemental strand, 29114460 - 29114431
Alignment:
Q  285 ttgatgaattcacttctgattgttgttgtt 314  Q
    ||||||||||||||||||||||||||||||    
T  29114460 ttgatgaattcacttctgattgttgttgtt 29114431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 36734450 - 36734512
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||||| || ||| ||||||||||||| ||||||||||  ||| ||||||||||    
T  36734450 ctaaggtaagggtgggattaactt-ctctaataatggg-tttataattctaaaatagggtttaac 36734512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 3414 - 3620
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3414 atctaatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtta 3513  T
Q  161 tagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggatta 260  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||     
T  3514 tagaaattagggttatatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgaggattt 3613  T
Q  261 aattggt 267  Q
    |||||||    
T  3614 aattggt 3620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 3741 - 3804
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3741 aaattggtgaactataatgttgttgttgatgaattcacttctgattgttgttatttttgttatg 3804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 5277 - 5488
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  |  ||| ||||||||  ||||||||||||||||||||||    
T  5277 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagt 5376  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    |||| || |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  5377 tgttgttcgttttgatgttatagatattagggttagatttcattcataatcttttgtataatctccttttctacttcaacccataagtgcttatttgtat 5476  T
Q  241 aaagtgattatt 252  Q
    ||||||||||||    
T  5477 aaagtgattatt 5488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 5180 - 5226
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggacta 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5180 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggacta 5226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 14520499 - 14520300
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  14520499 ctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgttataaaaat 14520400  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14520399 tagggttaaatttcactcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 14520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 17208577 - 17208378
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17208577 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 17208478  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||| |  ||||||||  |||||||||||||||||||||||||||| |||||||    
T  17208477 tagggttagatttcattcataatcttttgtataatctctttttcttcttctattcataagtgtctatttgtataaagtgattattgtggatttaattggt 17208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 24547280 - 24547054
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||| ||| ||||  |||| | ||||||| | || ||    
T  24547280 agcggtagaaccttgcgatcatctaacctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaacat-gttgt 24547182  T
Q  141 tgttct--tagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgt 238  Q
    |||| |  |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24547181 tgttttgttagttt-gatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgt 24547083  T
Q  239 ataaagtgattattgtggattaaattggt 267  Q
    ||||||||||||||||||||| |||||||    
T  24547082 ataaagtgattattgtggatttaattggt 24547054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 24548926 - 24549149
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||| |||| |||||||||||||| ||| ||||  |||| ||||||||  | || ||    
T  24548926 agcggtagaaccttgcgatcatctaacctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaatat-gttgt 24549024  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtat 240  Q
    | || ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||| ||    
T  24549025 t-ttgttagttt-gatgttatagaaattagggttagatttcattcataatattttgtacaatctctttttctacttctacccataagtgcctatttgcat 24549122  T
Q  241 aaagtgattattgtggattaaattggt 267  Q
    ||||| ||||||||||||| |||||||    
T  24549123 aaagtaattattgtggatttaattggt 24549149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 29907699 - 29907582
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-tt 159  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||    
T  29907699 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgatt 29907600  T
Q  160 atagaaattagggttaga 177  Q
    | ||||||||||||||||    
T  29907599 agagaaattagggttaga 29907582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 29948865 - 29948748
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-tt 159  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||    
T  29948865 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgatt 29948766  T
Q  160 atagaaattagggttaga 177  Q
    | ||||||||||||||||    
T  29948765 agagaaattagggttaga 29948748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 29998019 - 29997902
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-tt 159  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||    
T  29998019 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgatt 29997920  T
Q  160 atagaaattagggttaga 177  Q
    | ||||||||||||||||    
T  29997919 agagaaattagggttaga 29997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 14641535 - 14641656
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||    
T  14641535 cgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattga 14641634  T
Q  156 tgttatagaaattagggttaga 177  Q
    |||| | | ||||||| |||||    
T  14641635 tgttttgggaattaggtttaga 14641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 14152394 - 14152504
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttata 162  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||  || ||||||||||| ||    
T  14152394 taacctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgta 14152493  T
Q  163 gaaattagggtt 174  Q
    | ||||||||||    
T  14152494 g-aattagggtt 14152504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 2247998 - 2248061
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2247998 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 2248061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 22841278 - 22841390
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac---cttgtagttg--ttcttagttttgatgttata 162  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    |||| ||||  || |||||||||| ||||||    
T  22841278 ctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgttagttttgaggttata 22841377  T
Q  163 gaaattagggtta 175  Q
    |||||||||||||    
T  22841378 gaaattagggtta 22841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 54875474 - 54875581
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 54875572  T
Q  167 ttagggtta 175  Q
    |||||||||    
T  54875573 ttagggtta 54875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 3527156 - 3527261
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||   |||| |||||||| | ||| ||| || ||||||||||||||||||||||    
T  3527156 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 3527253  T
Q  168 tagggtta 175  Q
    ||||||||    
T  3527254 tagggtta 3527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 24546933 - 24546870
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24546933 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttattatg 24546870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 5215699 - 5215594
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaat 167  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||| ||  || ||||||||||| ||| |||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttattaataggttttgatgttgtag-aat 5215601  T
Q  168 tagggtt 174  Q
    |||||||    
T  5215600 tagggtt 5215594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 6156763 - 6156656
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  6156763 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattc-taaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 6156666  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  6156665 attagggtta 6156656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 6159470 - 6159350
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagtttt 153  Q
    |||| |||||| |||||||||||||| |||| |||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||    
T  6159470 cgatcatctaatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 6159372  T
Q  154 gatgttatagaaattagggtta 175  Q
    ||||||||||||||||||||||    
T  6159371 gatgttatagaaattagggtta 6159350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 17684835 - 17684942
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| ||||  |||| |||||||||  ||||| ||| || |||||||||||||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacatcttgttgtt-ttgttagttttgatgttatagaaa 17684933  T
Q  167 ttagggtta 175  Q
    |||||||||    
T  17684934 ttagggtta 17684942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 50350803 - 50350928
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaa--gggtttaacctt-gtagttgttcttagttt 152  Q
    |||| |||||| |||||||||||||||||||| | |||| |||| ||| || | ||||||| ||||||  |||||||||||| |||||| || |||||||    
T  50350803 cgatcatctaatctaaggtaagggtgggactaaccttctttaatcatgagtat-ataattctgaaaaaaggggtttaacctttgtagtttttgttagttt 50350901  T
Q  153 tgatgttatagaaattagggttagatt 179  Q
    |||||||||||| ||||||||||||||    
T  50350902 tgatgttatagagattagggttagatt 50350928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 14442228 - 14442120
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||  ||||  ||||||||   |||| ||| || ||||||||||||||||||||    
T  14442228 ctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 14442130  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  14442129 attagggtta 14442120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 17669698 - 17669805
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||| | |||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 17669796  T
Q  167 ttagggtta 175  Q
    |||||||||    
T  17669797 ttagggtta 17669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 21845651 - 21845763
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||  || | ||| ||| |||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  21845651 ctaaggtaagggtgggactaaccttctttaatcataagtat-atagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 21845749  T
Q  168 tagggttagatttg 181  Q
    |||| || ||||||    
T  21845750 taggttttgatttg 21845763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 24549270 - 24549330
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtt 320  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  24549270 aaattggtgaagtataatgttgttgttgatgaattcacttcttattgttgttgtttatgtt 24549330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 45803338 - 45803394
Alignment:
Q  76 agggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  45803338 agggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 45803394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 2841505 - 2841613
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||  ||||  ||||||||   |||| ||| || ||||||||||||||||||||    
T  2841505 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 2841603  T
Q  166 attagggtta 175  Q
    ||||| ||||    
T  2841604 attagagtta 2841613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 2247877 - 2247941
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgtt 2247941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 15566797 - 15566721
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||| ||||||||||||||| |||||||||||  |  ||| |||||||| |||||||||||||||||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 15566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 12917305 - 12917369
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| ||||  ||||||||||||||    
T  12917305 ctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 12917369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 3160626 - 3160728
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||| | |||| |||| ||| || | |||||||  |||| ||||||||| |||||||||||  |||||||||| ||||||||||    
T  3160626 ctaaggtaagggtgagactaaccttctttaatcatgagtat-ataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaat 3160724  T
Q  168 tagg 171  Q
    ||||    
T  3160725 tagg 3160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 48631384 - 48631278
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||   | | ||| ||| |||||||||||||| ||||||||||||  ||||||||||||||||||| |    
T  48631384 ctaaggtaagggtgggactaaccttctttaatcataaatat-atagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaagt 48631286  T
Q  168 tagggtta 175  Q
     |||||||    
T  48631285 cagggtta 48631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 50755266 - 50755360
Alignment:
Q  81 gggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttg--ttcttagttttgatgttatagaaattagggtt 174  Q
    ||||||| |||||||||||||||| || ||| ||||  |||| ||||||||| | || ||||  || |||||||||||||||||||||||||||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaacat-gttgttgctttgttagttttgatgttatagaaattagggtt 50755360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 25202187 - 25202074
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttag-ttttgatg-ttatagaa 165  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||| || |||| |||||||||| | || |||||| || | |||||||| ||| ||||    
T  25202187 ctaaggtaagggtgggactagc-ttcgctaataatggg-tttataaatctgaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 25202090  T
Q  166 attagggttagatttg 181  Q
    |||||| || ||||||    
T  25202089 attaggttttgatttg 25202074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 6003238 - 6003133
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| ||||| || ||| |||||||| |||||||||  |||| |||  ||||||  || || |||||||| ||||||    
T  6003238 ctaaggtaagggtgggactaaccttctttaata-tgagttctataattctgaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaaat 6003140  T
Q  168 tagggtt 174  Q
    |||||||    
T  6003139 tagggtt 6003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 11563801 - 11563747
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||| |||| |||||| |||||||||||||||||||| | |||||||||    
T  11563801 gtagaaccttccgatcatctaatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 25104106 - 25104148
Alignment:
Q  272 tataatgttgttgttgatgaattcacttctgattgttgttgtt 314  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  25104106 tataatgttgttgttgatgaattcacttatgattgttattgtt 25104148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 13520449 - 13520408
Alignment:
Q  130 aaccttgtagttgttcttagttttgatgttatagaaattagg 171  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  13520449 aaccttgtagttgttgttagttttgatgttataggaattagg 13520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 16050984 - 16050949
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  16050984 taacctaaggtaagggtgggactaactttctctaat 16050949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 174
Target Start/End: Original strand, 53646051 - 53646163
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgtt 159  Q
    |||||| |||||||||||||||||||| | |||| |||| ||   | |  |||| | |||||||||||||||||||||||||||  || |||||||||||    
T  53646051 atctaatctaaggtaagggtgggactaaccttctttaatcataaatatg-taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 53646149  T
Q  160 atagaaattagggtt 174  Q
     ||| ||||||||||    
T  53646150 gtag-aattagggtt 53646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 12155089 - 12155130
Alignment:
Q  134 ttgtagttgttcttagttttgatgttatagaaattagggtta 175  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  12155089 ttgtagttgttaatagttttgatgttatagaagttagggtta 12155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 54330355 - 54330411
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  54330355 gaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 54330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 20410497 - 20410708
Alignment:
Q  54 tgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagtttt 153  Q
    |||||| ||||||  |||||||||||||| | |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||    
T  20410497 tgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagtttt 20410596  T
Q  154 gatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattg 253  Q
    ||||  ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  20410597 gatg--atagaaattagggttagatctcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattg 20410694  T
Q  254 tggattaaattggt 267  Q
    |||||| |||||||    
T  20410695 tggatttaattggt 20410708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 166 - 323
Target Start/End: Original strand, 21686158 - 21686315
Alignment:
Q  166 attagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattg 265  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  21686158 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattg 21686257  T
Q  266 gtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21686258 gtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 21686315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 21683051 - 21683171
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21683051 gtaggaccttgcgatcatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgtt 21683150  T
Q  145 cttagttttgatgttatagaaa 166  Q
      ||||||||||||||||||||    
T  21683151 -gtagttttgatgttatagaaa 21683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 15998943 - 15998806
Alignment:
Q  67 cctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||| ||||| |||||||||||  |  ||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  15998943 cctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatagaaa 15998844  T
Q  167 ttagggttagatttgattcataatcttttgtataatct 204  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  15998843 ttagggttagatttcattgataatcttttgtataatct 15998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 19825473 - 19825576
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||| ||||||||||    
T  19825473 cgatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttga 19825572  T
Q  156 tgtt 159  Q
    ||||    
T  19825573 tgtt 19825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 18982625 - 18982515
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaa 166  Q
    ||||||||| ||||||| || |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||  ||| ||||||| ||| |||||    
T  18982625 ctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatgattagagaaa 18982526  T
Q  167 ttagggttaga 177  Q
    |||||||||||    
T  18982525 ttagggttaga 18982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 23658142 - 23658044
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaa 165  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||  || ||||||||||| |||||    
T  23658142 ctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 23658044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 10446277 - 10446162
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgt 158  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||| |||||    
T  10446277 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttcgatgt 10446179  T
Q  159 tatagaaattagggtta 175  Q
    |||||||||||||||||    
T  10446178 tatagaaattagggtta 10446162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 34140448 - 34140554
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||   ||||||| |||||||||||| |||||||||||||||    
T  34140448 atctaatctaaggtaagggtgggactagctt-ctctaataatgggttt-ataattttgaaatctggtttaatcttgtagttgttgttagttttgatgtta 34140545  T
Q  161 tagaaatta 169  Q
    ||| |||||    
T  34140546 taggaatta 34140554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 34153064 - 34153170
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||   | ||||| |||||||||||| |||||||||||||||    
T  34153064 atctaatctaaggtaagggtgggactagctt-ctctaataatgggttt-ataattttgaaatctgttttaatcttgtagttgttgttagttttgatgtta 34153161  T
Q  161 tagaaatta 169  Q
    ||| |||||    
T  34153162 taggaatta 34153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 1819005 - 1818899
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||| | |||| |||| ||| || | ||| ||| |||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  1819005 ctaaggtaagggtgagactaaccttctttaatcatgagtat-atagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 1818907  T
Q  168 tagggtta 175  Q
    ||||||||    
T  1818906 tagggtta 1818899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 7217216 - 7217347
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||| | |||| |||| ||  | | | |||| | |||||||||||||||||||||||    
T  7217216 agcggtagaaccttgcgatcatctagcctaaggtaagggtgagactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagt 7217314  T
Q  141 tgttcttagttttgatgttatagaaattagggtt 174  Q
    ||||  ||| ||||||||| ||| ||||||||||    
T  7217315 tgttaataggtttgatgttgtag-aattagggtt 7217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 29045324 - 29045260
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  29045324 ctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaac 29045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 18455045 - 18455147
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || | |||| |||| ||  | | | |||| | |||||||| ||||||||||||||    
T  18455045 agcggtagaaccttgtgatcatctaacctaaggtaagggtgggagtaaccttctttaatcataag-tatgtaatcctgaaaaaggttttaaccttgtagt 18455143  T
Q  141 tgtt 144  Q
    ||||    
T  18455144 tgtt 18455147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 25601371 - 25601437
Alignment:
Q  111 taattcagaaaaagggtttaacctt-gtagttgttcttagttttgatgttatagaaattagggttagatt 179  Q
    |||||| |||||||||||||||||| |||||||||   |||||| |||||||||||||||||||||||||    
T  25601371 taattctgaaaaagggtttaacctttgtagttgtt---agttttcatgttatagaaattagggttagatt 25601437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 24506155 - 24506217
Alignment:
Q  109 tataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagg 171  Q
    |||||||| ||||||||||||||  |||||||||||  ||||||||||||||||||| |||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttagg 24506217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 22557323 - 22557204
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    ||||||||||||||| |||||||||||||||||||||||| || | |||| | || ||  | | | |||| | |||||||||||||||||||||||||||    
T  22557323 gtagaaccttgcgatcatctaacctaaggtaagggtgggagtaaccttct-ttatcataag-tatgtaatcctgaaaaagggtttaaccttgtagttgtt 22557226  T
Q  145 ctta-gttttgatgttatagaa 165  Q
      || ||||||||||| |||||    
T  22557225 aataggttttgatgttgtagaa 22557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 13285808 - 13285725
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||| |||||||||||||||||||| | |||| |||| ||| |||| ||||||| ||||| ||||||| | |||| ||||||    
T  13285808 atctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgtt 13285725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 31734764 - 31734655
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttata 162  Q
    |||||||||||||||||||||||| | |||| |||| ||  || |  |||||| ||||||||||||||||||| |||||||  || ||||||||||| ||    
T  31734764 taacctaaggtaagggtgggactaaccttctttaatcataagtatg-taattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgta 31734666  T
Q  163 gaaattagggtt 174  Q
     |||||||||||    
T  31734665 -aaattagggtt 31734655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 18982418 - 18982362
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtt 174  Q
    ||||||||||||||  |||||||||||  ||||||||||| | ||||| ||||||||    
T  18982418 gaaaaagggtttaattttgtagttgttgatagttttgatgctgtagaagttagggtt 18982362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 15608 - 15813
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgtta 160  Q
    |||||| |||||||||||||||||||| ||| |||||||||||| || ||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  15608 atctaatctaaggtaagggtgggactaactt-ctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgtta 15706  T
Q  161 tagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggatta 260  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||||     
T  15707 tagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacacataagtgaatatatgtataaagtgattattgtggattt 15806  T
Q  261 aattggt 267  Q
    |||||||    
T  15807 aattggt 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 15934 - 15997
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  15934 aaattggtgaagtataacgttattgttgatgaattcacttctgattgttgttgtttttgttatg 15997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 2073 - 1876
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2073 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 1974  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||||||  ||||||||||||| |||||||| |||||||| ||| | |||||||||| |||||||||||||||||||||||||||| |||||||    
T  1973 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 1755 - 1699
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 316  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  1755 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 17520 - 17719
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    ||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  17520 ctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgttatagaaat 17619  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  17620 tagggttatatttcattcataatcttttgtacaatcactttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 17719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 186195 - 186392
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  186195 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 186294  T
Q  168 tagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||||||  ||||||||||||| |||||||| |||||||| ||| | |||||||||| |||||||||||||||||||||||||||| |||||||    
T  186295 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 186513 - 186569
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 316  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  186513 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 267
Target Start/End: Original strand, 2454 - 2652
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaag--ggtttaaccttgtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||||||| ||| |||||||||||||||||||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatgttatagaaa 2553  T
Q  167 ttagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattgg 266  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  | |  ||||||||||||||||||||||| ||||||    
T  2554 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg--tctacgtataaagtgattattgtggatttaattgg 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 56 - 266
Target Start/End: Original strand, 17927 - 18137
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||||||||| |||||||||||  |  ||| |||||||| |||||||| |||||||||||||||||| ||||||||||    
T  17927 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttga 18026  T
Q  156 tgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtg 255  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  18027 tgttatagaaattagggttagatttcattcataatattttgtttaatctctttttttacttctacccataagtgcttatttgtataaagtgattattgtg 18126  T
Q  256 gattaaattgg 266  Q
     ||| ||||||    
T  18127 aatttaattgg 18137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 121; Significance: 6e-62; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 119 - 267
Target Start/End: Original strand, 23932 - 24080
Alignment:
Q  119 aaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggttagatttgattcataatcttttgtataatctctttttctacttcc 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  23932 aaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 24031  T
Q  219 acccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  24032 acccataagtgactatatgtataaagtgattattgtggatttaattggt 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 23893 - 23925
Alignment:
Q  70 aaggtaagggtgggactagctttctctaataat 102  Q
    |||||||||||| ||||||||||||||||||||    
T  23893 aaggtaagggtgagactagctttctctaataat 23925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 56 - 266
Target Start/End: Original strand, 61835 - 62048
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||||||||||||| ||||| |||||||||||  |  ||| |||||||| ||||| || |||||||||||||||||| ||||||||||    
T  61835 cgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa-ggatttaaccttgtagttgttgttagttttga 61933  T
Q  156 tgttata----gaaattagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattat 251  Q
    |||||||    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  61934 tgttatatatagaaattagggttagatttcattcataatcttttgtttaatctctttttctacttctacctataagtgcttatttgtataaagtgattat 62033  T
Q  252 tgtggattaaattgg 266  Q
    |||||||| ||||||    
T  62034 tgtggatttaattgg 62048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 267
Target Start/End: Original strand, 11160 - 11359
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttct--tagttttgatgttatagaaa 166  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||  |||| ||||||| | | || |||||| |  |||||||||||||||| |||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttatcat-gttgttgttttgttagttttgatgttatataaa 11258  T
Q  167 ttagggttagatttgattcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattgg 266  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||| || ||||||    
T  11259 ttagggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgtctatttgtataaagtgattattgtgggtttaattgg 11358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 2934 - 2831
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||    
T  2934 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttataggaat 2835  T
Q  168 tagg 171  Q
    ||||    
T  2834 tagg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 2172 - 2287
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||  |  ||| |||||||| |||||||||||||||||||||||    
T  2172 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagt 2271  T
Q  141 tgttcttagttttgat 156  Q
    |||| |||||||||||    
T  2272 tgttgttagttttgat 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 1128 - 1022
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaatt 168  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaatt 1029  T
Q  169 agggtta 175  Q
    | |||||    
T  1028 atggtta 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 14002 - 13893
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||| |||||||||||||| | | |||    
T  14002 ctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttagttttgatgttttgggaat 13903  T
Q  168 tagggttaga 177  Q
    |||| |||||    
T  13902 taggtttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 20011 - 19976
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaat 99  Q
    |||||||||||||||||||||||| |||||||||||    
T  20011 taacctaaggtaagggtgggactaactttctctaat 19976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 4988 - 4878
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacc-ttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||  ||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgttatagtgat 4890  T
Q  168 tagggttagatt 179  Q
    ||||||||||||    
T  4889 tagggttagatt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 14578 - 14689
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-tt 159  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||| |||||||||||| ||    
T  14578 atctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgatt 14677  T
Q  160 atagaaattagg 171  Q
    | ||||||||||    
T  14678 agagaaattagg 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 23636 - 23747
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-tt 159  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||| |||||||||||| ||    
T  23636 atctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgatt 23735  T
Q  160 atagaaattagg 171  Q
    | ||||||||||    
T  23736 agagaaattagg 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 19272 - 19154
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttga 155  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||  |  ||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  19272 cgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttga 19173  T
Q  156 tgttatagaaattagggtt 174  Q
    |||||||||||| ||||||    
T  19172 tgttatagaaataagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 19160 - 19115
Alignment:
Q  122 aagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  19160 aagggtttaaccttgtagttgttgatagttttgatgttatagaaat 19115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 26807 - 26669
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || ||| ||||||||||||| || |||||||||||  | |||| |||||||| ||||||||||||||| |||||||    
T  26807 agcggtagaaccttgcgatcaatcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagt 26708  T
Q  141 tgttcttagttttgatgttatagaaattagggttagatt 179  Q
    |||| |||| |||||||||||||| ||||||||||||||    
T  26707 tgttgttagctttgatgttatagagattagggttagatt 26669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 23666 - 23564
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||  | |||| |||| ||| || | |||||||  |||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  23666 ctaaggtaagggtgggactgaccttctttaatcatgagtat-ataattctaaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagt 23568  T
Q  168 tagg 171  Q
    ||||    
T  23567 tagg 23564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 18627 - 18749
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggtt-ttataattcagaaaaagggtttaaccttgtagttgttcttagttttg 154  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||  |||||| |||||||||||||||||||| |||||||||    
T  18627 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttg 18726  T
Q  155 atgttatagaaattagggttaga 177  Q
    ||||| | | ||||||| |||||    
T  18727 atgttttgggaattaggtttaga 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 16418 - 16528
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaa 166  Q
    |||||||||||||| || || |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||| |||||    
T  16418 ctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 16517  T
Q  167 ttagggttaga 177  Q
    |||||||||||    
T  16518 ttagggttaga 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 18700 - 18811
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatg-ttatagaa 165  Q
    ||||||| ||||||||| || ||||||||||||||| ||| ||||||||  ||||| |||||| ||||||||||||| ||| ||  ||||| ||| ||||    
T  18700 ctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttgttaggtcatgatgattagagaa 18799  T
Q  166 attagggttaga 177  Q
    ||||||||||||    
T  18800 attagggttaga 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 18906 - 18962
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtt 174  Q
    |||||| |||||||  |||||||||||  ||||||||||| ||||||| ||||||||    
T  18906 gaaaaaaggtttaattttgtagttgttgatagttttgatgctatagaagttagggtt 18962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 8722 - 8853
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacc--ttgtagttg 142  Q
    |||||||||| |||| |||||| |||||||||||||| ||||||||| ||||||||||||||| ||| ||||  |||| ||||| ||||  |||| |||     
T  8722 gtagaaccttccgatcatctaatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggttgaacctattgttgtt- 8820  T
Q  143 ttcttagttttgatgttatagaaattagggtta 175  Q
    || ||||||||||||||||||||||||||||||    
T  8821 ttgttagttttgatgttatagaaattagggtta 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 305 - 242
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  305 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 426 - 362
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgtt 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 5698 - 5578
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattc--agaaaaagggtttaaccttgtagttgttctta-gttt 152  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||||||| |||||||||||  || ||||    
T  5698 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttt 5599  T
Q  153 tgatgttatagaaattagggtt 174  Q
    ||||||| ||| ||||||||||    
T  5598 tgatgttgtag-aattagggtt 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 6392 - 6529
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacc-ttgtag 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||  |||| ||  | | | ||||||  ||||||||||||||| ||||||    
T  6392 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttcattaatcataag-tatgtaattc-taaaaagggtttaacctttgtag 6489  T
Q  140 ttgttcttagttttgatgttatagaaattagggttagatt 179  Q
    ||||| ||||||||||||||||||| |||| || ||||||    
T  6490 ttgttgttagttttgatgttatagagattatggctagatt 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 19921 - 19801
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagtttt 153  Q
    |||| |||||| ||||||||||||| ||||||| |||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||    
T  19921 cgatcatctaatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 19823  T
Q  154 gatgttatagaaattagggtta 175  Q
    ||||||||||||||||||||||    
T  19822 gatgttatagaaattagggtta 19801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 5514 - 5445
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggttta 130  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||||||||    
T  5514 atctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 11681 - 11605
Alignment:
Q  56 cgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||| ||||||  |||| ||||||||||||||  ||||||||| |||||||| |||||||| |||||||||||||||    
T  11681 cgatcatctaatgtaagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaac 11605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 10999 - 10893
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||  ||||||||||||||   |||| ||| || |||||||||||||||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattc-taaaaagggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 10902  T
Q  167 ttagggtta 175  Q
    |||||||||    
T  10901 ttagggtta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 127335 - 127450
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgt 158  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||    
T  127335 atctaatctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgt 127433  T
Q  159 tatagaaattagggtta 175  Q
    |||||| ||||||||||    
T  127434 tatagagattagggtta 127450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 2300 - 2236
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  2300 ctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaac 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 10516 - 10453
Alignment:
Q  260 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatg 323  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10516 aaattggcgaagtataatgttgttgttgatgaattcacttctgattgttcttgtttttgttatg 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 10636 - 10573
Alignment:
Q  80 tgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgtt 144  Q
    |||||||||||||||||||  |||| || |||||||| ||||||||||||||| |||||||||||    
T  10636 tgggactagctttctctaaagatgg-ttgtataattctgaaaaagggtttaacattgtagttgtt 10573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 28611 - 28493
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaacctt-gtagttgttcttagttttgatgtt 159  Q
    |||||| |||||||||| ||||||||| | |||  |||| ||| || | ||||||| |||||||||||||||||| ||||||||| |||||||| |||||    
T  28611 atctaatctaaggtaagagtgggactaaccttccttaatcatgagtat-ataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgtt 28513  T
Q  160 atagaaattagggttagatt 179  Q
    ||||| ||||||||||||||    
T  28512 atagagattagggttagatt 28493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 6498 - 6395
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || |||||||||||||  ||||||||||||||||||||| ||| | |||||| ||||||||| |||| ||||||||    
T  6498 agcggtagaaccttgcgatcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagt 6399  T
Q  141 tgtt 144  Q
    ||||    
T  6398 tgtt 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 4501 - 4369
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| | |||| |||| ||  | | |||||| | |||||| ||||||||||||||||    
T  4501 agcggtacaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatataatcccgaaaaaaggtttaaccttgtagt 4403  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  4402 tgttaataggttttgatgttgtag-aattagggtt 4369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 328260 - 328318
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  328260 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaat 328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 66071 - 66135
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||    
T  66071 ctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaac 66135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 75997 - 75885
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgt 158  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||  |||| |||||||||   |||| ||| || |||||||||||||    
T  75997 atctaatctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagttttgatgt 75899  T
Q  159 tatagaaattaggg 172  Q
    ||||  ||||||||    
T  75898 tataagaattaggg 75885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 111413 - 111344
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgt 137  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||  |||| ||||||||| ||||    
T  111413 ctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 73139 - 73032
Alignment:
Q  69 taaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaaa 166  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||| ||||  |||| |||||||||   |||| ||| || |||||||| ||||||||  ||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagtttttatgttataagaa 73041  T
Q  167 ttagggtta 175  Q
    |||||||||    
T  73040 ttagggtta 73032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 40160 - 40268
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggtttt--ataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaa 165  Q
    |||||||||||||||||||| | ||||||||| ||| || |   |||||||  ||||||||||||||| ||||||||||  |||||||||||||||||||    
T  40160 ctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttatagaa 40259  T
Q  166 attagggtt 174  Q
     ||||||||    
T  40260 gttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 23587 - 23503
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttt 152  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||  |||| ||||| ||||||| ||||||| |||||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttgttagttt 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 9900 - 9999
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||| ||  | | | |||||| ||||||||||||| |||||||||    
T  9900 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaattctgaaaaagggtttagccttgtagt 9998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 8901 - 8799
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||| ||  | | | |||| | ||||||||||||||||||||||     
T  8901 agcggtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtaga 8803  T
Q  141 tgtt 144  Q
    ||||    
T  8802 tgtt 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 59655 - 59757
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||| ||| | |||| |||| ||| || | ||||||| ||||||||||||||| |||||||||||  |||||||||| ||||||||||    
T  59655 ctaaggtaagggtgggtctaaccttctttaatcatgagtat-ataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatagaaat 59753  T
Q  168 tagg 171  Q
    ||||    
T  59754 tagg 59757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 43786 - 43899
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttag-ttttgatg-ttatagaa 165  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||| | || |||||| |||| |||||||| ||| ||||    
T  43786 ctaaggtaagggtgggactagc-ttctctaataatggg-tttataattctgaaatagggtttaacatggttgttgttattagattttgatgattagagaa 43883  T
Q  166 attagggttagatttg 181  Q
    |||||| || ||||||    
T  43884 attaggttttgatttg 43899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 39094 - 39133
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttt 108  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  39094 ctaaggtaagggtgggactagc-ttctctaataatgggttt 39133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 40160 - 40052
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac--cttgtagttgttcttagttttgatgttatagaa 165  Q
    ||||||||||| || ||||| ||||||||||||||||||| ||| ||||  |||| |||||||||   |||| ||| || ||||||||||||||||||||    
T  40160 ctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 40062  T
Q  166 attagggtta 175  Q
    ||||||||||    
T  40061 attagggtta 40052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 35185 - 35249
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  35185 ctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaac 35249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 3257 - 3155
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||| || | ||||||  ||||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  3257 ctaaggtaagggtgggactaaccttctttaatcatgagtat-ataattatgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagt 3159  T
Q  168 tagg 171  Q
    ||||    
T  3158 tagg 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 38441 - 38543
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||| ||||| | |||| |||| ||| || | ||||||| ||||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  38441 ctaaggtaagggtgtgactaaccttctttaatcatgagtat-ataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagt 38539  T
Q  168 tagg 171  Q
    ||||    
T  38540 tagg 38543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 425 - 293
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||| || ||   |||| |||| ||  | | | |||| | |||||||||||||||||||||||    
T  425 agcggtagaaccttgcgatcatctaacctaaggtaagggtgagattaatcttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagt 327  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  326 tgttaataggttttgatgttgtag-aattagggtt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 68725 - 68789
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||  |||| |||||||||    
T  68725 ctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaac 68789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 57050 - 57007
Alignment:
Q  44 ggtagaaccttgcgattatctaacctaaggtaagggtgggacta 87  Q
    |||||||||| ||||| || ||||||||||||||||||||||||    
T  57050 ggtagaacctggcgatcatataacctaaggtaagggtgggacta 57007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 6497 - 6568
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaac 132  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||||| ||| |||| ||||| |||||||||    
T  6497 atctaatctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaac 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 7513 - 7615
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||| || | || |||| ||||||||||||||  || ||||||||  ||||||||||||||||||| |    
T  7513 ctaaggtaagggtgggactaaccttctttaattatgagtat-atgattctgaaaaagggtttaattttatagttgttgatagttttgatgttatagaagt 7611  T
Q  168 tagg 171  Q
    ||||    
T  7612 tagg 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 5615 - 5718
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttag-ttttgatg-ttatagaa 165  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||| |||||| | || |||||| || | |||||||| ||| ||||    
T  5615 ctaaggtaagggtgggactagc-ttctctaataatggg-tttataattctgaaataggatttaacatggttgttgttgtttgattttgatgattagagaa 5712  T
Q  166 attagg 171  Q
    ||||||    
T  5713 attagg 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 180 - 74
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||  || | ||  ||| |||||||||||| |  |||||||||||  ||||||||||||||||||| |    
T  180 ctaaggtaagggtgggactaaccttctttaatcattagtat-atggttctgaaaaagggttttaatttgtagttgttaatagttttgatgttatagaagt 82  T
Q  168 tagggtta 175  Q
    ||||||||    
T  81 tagggtta 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 1034 - 1085
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctct 96  Q
    |||||||||| |||| |||||| |||||||||||||||||||| ||||||||    
T  1034 gtagaaccttccgatcatctaatctaaggtaagggtgggactaactttctct 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 28766 - 28660
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||| ||||||||| | |||| |||| ||  || | ||||||| ||||||| |||||| ||||||||||||  |||||||  |||||||| |||    
T  28766 ctaaggtaagagtgggactaaccttctttaatcataagtat-ataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaat 28668  T
Q  168 tagggtta 175  Q
    ||||||||    
T  28667 tagggtta 28660  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 33534 - 33402
Alignment:
Q  41 agcggtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagt 140  Q
    ||||||||||||||||||| |   || |||||||||||||||||||| | |||| |||| ||  || || |||| | |||||||||||||| | ||||||    
T  33534 agcggtagaaccttgcgatcaatcaatctaaggtaagggtgggactaaccttctttaatcataagtatt-taatcctgaaaaagggtttaaacgtgtagt 33436  T
Q  141 tgttctta-gttttgatgttatagaaattagggtt 174  Q
    ||||  || ||||||||||| ||| ||||||||||    
T  33435 tgttaataggttttgatgttgtag-aattagggtt 33402  T

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Target: scaffold0462 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 1313 - 1264
Alignment:
Q  125 ggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtt 174  Q
    ||||||||||| ||||||||  ||||||||||||||||||||| ||||||    
T  1313 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 1264  T

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Target: scaffold0462; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 6819 - 6770
Alignment:
Q  125 ggtttaaccttgtagttgttcttagttttgatgttatagaaattagggtt 174  Q
    ||||||||||| ||||||||  ||||||||||||||||||||| ||||||    
T  6819 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 6770  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 8904 - 8843
Alignment:
Q  61 atctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaa 122  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||| || ||| |||| |||||    
T  8904 atctaatctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaa 8843  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 5039 - 5075
Alignment:
Q  63 ctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||||||||| |||||||||||    
T  5039 ctaacctaaggtaagggtgggactaactttctctaat 5075  T

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Target: scaffold0083; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 10749 - 10785
Alignment:
Q  63 ctaacctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10749 ctaacctaaggtaagggtgggactaactttctctaat 10785  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 17163 - 17057
Alignment:
Q  63 ctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttata 162  Q
    |||| |||||||||||||||||| |   |||| |||| ||| || | |||||||  |||||||||||||| |||||||||||  ||| |||||| |||||    
T  17163 ctaatctaaggtaagggtgggacgaatcttctttaatcatgagtat-ataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattata 17066  T
Q  163 gaaattagg 171  Q
    |||||||||    
T  17065 gaaattagg 17057  T

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Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 26694 - 26588
Alignment:
Q  63 ctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttata 162  Q
    |||| |||||||||||||||||| |   |||| |||| ||| || | |||||||  |||||||||||||| |||||||||||  ||| |||||| |||||    
T  26694 ctaatctaaggtaagggtgggacgaatcttctttaatcatgagtat-ataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattata 26597  T
Q  163 gaaattagg 171  Q
    |||||||||    
T  26596 gaaattagg 26588  T

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Target: scaffold1800 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 660 - 558
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||| || | |||||||  ||||| |||||||  |||| ||||||  || |||||||||||||||| |    
T  660 ctaaggtaagggtgggactaaccttctttaatcatgagtct-ataattcttaaaaatggtttaattttgttgttgttgataattttgatgttatagaagt 562  T
Q  168 tagg 171  Q
    ||||    
T  561 tagg 558  T

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Target: scaffold0149 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 99
Target Start/End: Complemental strand, 21664 - 21633
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaat 99  Q
    ||||||||||||||||||||||||||||||||    
T  21664 ctaaggtaagggtgggactagctttctctaat 21633  T

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Target: scaffold0059 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 49782 - 49680
Alignment:
Q  68 ctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttatagaaat 167  Q
    |||||||||||||||||||| | |||| |||| ||| ||   ||||||| ||||||||||||||  || |  |||||  ||||||||||||||||||| |    
T  49782 ctaaggtaagggtgggactaaccttctttaatcatgagtcc-ataattctgaaaaagggtttaattttatttttgttgatagttttgatgttatagaagt 49684  T
Q  168 tagg 171  Q
    ||||    
T  49683 tagg 49680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 174278 - 174169
Alignment:
Q  64 taacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttctta-gttttgatgttata 162  Q
    |||||||| ||||||||||||||| | |||| |||| ||  || |  |||| | |||||||||||||||||||||||||||  || ||||||||||| ||    
T  174278 taacctaaagtaagggtgggactaaccttctttaatcataagtatg-taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgta 174180  T
Q  163 gaaattagggtt 174  Q
    | ||||||||||    
T  174179 g-aattagggtt 174169  T

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Target: scaffold0120 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 29315 - 29257
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttctta-gttttgatgttatagaaattagggtta 175  Q
    |||||||||||||||||||||||||||  || |||||||||||| ||| |||| |||||    
T  29315 gaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattaaggtta 29257  T

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Target: scaffold0183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 11312 - 11227
Alignment:
Q  182 attcataatcttttgtataatctctttttctacttccacccataagtgcatatttgtataaagtgattattgtggattaaattggt 267  Q
    |||||||||| ||||||||||||| |||| | |||  |  || |||||| |||||||  ||||||||||||||| ||| |||||||    
T  11312 attcataatcgtttgtataatctcctttttttcttaaattcaaaagtgcttatttgtgaaaagtgattattgtgaatttaattggt 11227  T

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Target: scaffold0461 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 12461 - 12433
Alignment:
Q  146 ttagttttgatgttatagaaattagggtt 174  Q
    |||||||||||||||||||||||||||||    
T  12461 ttagttttgatgttatagaaattagggtt 12433  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 378 - 438
Alignment:
Q  118 gaaaaagggtttaaccttgtagttgttcttagttttgatg-ttatagaaattagggttaga 177  Q
    |||||| |||||||||||||||||||  |||| ||||| | ||| ||||||||||||||||    
T  378 gaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 31987 - 31880
Alignment:
Q  63 ctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaaaagggtttaaccttgtagttgttcttagttttgatgttata 162  Q
    |||| |||||||||||||| ||||| |  ||| |||| ||| || | || |||| ||||||||||||||  || ||||||||  ||||||||||||| ||    
T  31987 ctaatctaaggtaagggtgagactaaccatctttaatcatgagtat-atgattctgaaaaagggtttaattttatagttgttaatagttttgatgttgta 31889  T
Q  163 gaaattagg 171  Q
    ||| |||||    
T  31888 gaagttagg 31880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 2965 - 2889
Alignment:
Q  45 gtagaaccttgcgattatctaacctaaggtaagggtgggactagctttctctaataatgggttttataattcagaaa 121  Q
    |||||||||||  |||| | || ||||||||||||||||| || |||||||||||  | |||| |||||||| ||||    
T  2965 gtagaaccttgtaattaaccaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 2889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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