View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9426_low_33 (Length: 267)
Name: NF9426_low_33
Description: NF9426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9426_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 24013939 - 24014186
Alignment:
| Q |
10 |
agatggacatcaaacccaactacaatgcaaagaaaaatcaagaataacaccattgaaaaggatccacatgagaaagatacaaatcaatgcacagaacgtc |
109 |
Q |
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| T |
24013939 |
agatggccatcaaacccaactacaatgcaaagaaaaatcaagaataacaccattgaaaaggatccacatgagaaagatacaaatcaatgcacagaacgtc |
24014038 |
T |
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| Q |
110 |
caagaagagggcgtataatataagcaatcaaattaaaattgaaaaggatccacatcaaaatttggagattaaatggtttggtcattagatgaatacccct |
209 |
Q |
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||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
24014039 |
caagaagagagcgtattatataagcaatcaaattaaaattgaaaaggatccacatcaaaatttggagattaaatggtttgttcattagatgaatacccct |
24014138 |
T |
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| Q |
210 |
aaagctttcaatacatgctcaggtgcaatcgtccttctttcctctctg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24014139 |
aaagctttcaatacatgctcaggtgcaatcgtccttctttcctctctg |
24014186 |
T |
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