View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9427_low_14 (Length: 431)

Name: NF9427_low_14
Description: NF9427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9427_low_14
NF9427_low_14
[»] chr2 (48 HSPs)
chr2 (58-425)||(33907888-33908233)
chr2 (58-415)||(26828166-26828501)
chr2 (58-425)||(11707271-11707615)
chr2 (58-415)||(5253001-5253336)
chr2 (58-415)||(19167150-19167483)
chr2 (194-415)||(30569957-30570173)
chr2 (194-415)||(36632454-36632675)
chr2 (58-415)||(45399454-45399793)
chr2 (113-415)||(1514326-1514610)
chr2 (58-314)||(26822360-26822598)
chr2 (113-415)||(42886041-42886327)
chr2 (58-411)||(4812185-4812532)
chr2 (58-414)||(45204295-45204643)
chr2 (57-314)||(19125999-19126238)
chr2 (113-415)||(11448398-11448682)
chr2 (58-314)||(16723662-16723901)
chr2 (117-312)||(33663115-33663292)
chr2 (69-314)||(21098429-21098656)
chr2 (58-188)||(35285584-35285713)
chr2 (233-415)||(35285734-35285916)
chr2 (231-415)||(27364276-27364461)
chr2 (113-415)||(18092075-18092345)
chr2 (346-415)||(33663352-33663421)
chr2 (58-187)||(27364142-27364270)
chr2 (113-266)||(9543994-9544130)
chr2 (113-270)||(10048371-10048511)
chr2 (113-193)||(4291028-4291108)
chr2 (58-173)||(18137828-18137942)
chr2 (362-415)||(16723921-16723974)
chr2 (362-415)||(21098356-21098409)
chr2 (113-184)||(28608446-28608517)
chr2 (119-193)||(36632396-36632470)
chr2 (362-415)||(19126256-19126309)
chr2 (362-415)||(26822287-26822340)
chr2 (206-262)||(4291104-4291160)
chr2 (117-173)||(14323269-14323325)
chr2 (119-178)||(6342787-6342846)
chr2 (117-178)||(28502440-28502501)
chr2 (46-94)||(1992939-1992986)
chr2 (117-173)||(1993010-1993066)
chr2 (58-100)||(9916707-9916749)
chr2 (58-100)||(4289028-4289070)
chr2 (58-96)||(37224018-37224056)
chr2 (58-99)||(7364780-7364821)
chr2 (58-94)||(6342729-6342765)
chr2 (58-94)||(9542630-9542666)
chr2 (58-94)||(14323211-14323247)
chr2 (58-94)||(28502526-28502562)
[»] chr5 (66 HSPs)
chr5 (58-425)||(34373669-34374015)
chr5 (58-413)||(35539210-35539543)
chr5 (58-415)||(17997166-17997501)
chr5 (58-415)||(20350533-20350866)
chr5 (194-415)||(1851365-1851581)
chr5 (194-415)||(3150009-3150225)
chr5 (113-415)||(3029353-3029632)
chr5 (194-415)||(21030707-21030923)
chr5 (194-415)||(27066470-27066686)
chr5 (192-415)||(19448593-19448811)
chr5 (58-415)||(20995179-20995518)
chr5 (116-407)||(287071-287343)
chr5 (60-415)||(20758543-20758876)
chr5 (60-314)||(2195832-2196068)
chr5 (113-405)||(33706111-33706385)
chr5 (58-314)||(7286348-7286586)
chr5 (120-314)||(26320448-26320625)
chr5 (58-413)||(10511665-10511984)
chr5 (113-314)||(33610504-33610688)
chr5 (194-314)||(30690001-30690121)
chr5 (132-425)||(38935050-38935309)
chr5 (328-415)||(4882870-4882957)
chr5 (245-415)||(3396588-3396757)
chr5 (115-314)||(12419921-12420107)
chr5 (328-415)||(41781440-41781527)
chr5 (113-294)||(41781631-41781795)
chr5 (113-310)||(34726735-34726919)
chr5 (58-188)||(33931026-33931155)
chr5 (328-415)||(12420131-12420218)
chr5 (328-415)||(33930412-33930499)
chr5 (113-193)||(41691103-41691183)
chr5 (58-193)||(4882978-4883112)
chr5 (113-266)||(25696895-25697031)
chr5 (58-178)||(19395576-19395695)
chr5 (113-193)||(34717417-34717497)
chr5 (116-270)||(30142270-30142407)
chr5 (362-415)||(7286275-7286328)
chr5 (362-415)||(26320645-26320698)
chr5 (362-415)||(30689911-30689964)
chr5 (362-425)||(33610708-33610771)
chr5 (116-193)||(3149948-3150025)
chr5 (117-173)||(31295612-31295668)
chr5 (206-262)||(41691051-41691107)
chr5 (58-172)||(27066691-27066804)
chr5 (215-272)||(33930966-33931023)
chr5 (113-173)||(19448813-19448873)
chr5 (206-262)||(34717365-34717421)
chr5 (362-415)||(2195763-2195815)
chr5 (58-99)||(9809821-9809862)
chr5 (58-99)||(12702061-12702102)
chr5 (60-173)||(21030927-21031039)
chr5 (113-173)||(30690125-30690185)
chr5 (58-94)||(31295552-31295588)
chr5 (58-101)||(38935346-38935389)
chr5 (58-100)||(1685048-1685090)
chr5 (58-100)||(3086433-3086475)
chr5 (58-100)||(25695539-25695581)
chr5 (58-100)||(34719457-34719499)
chr5 (56-94)||(34725257-34725295)
chr5 (58-99)||(7863529-7863570)
chr5 (58-99)||(22602635-22602676)
chr5 (58-99)||(36366125-36366166)
chr5 (58-99)||(42819330-42819371)
chr5 (58-94)||(5620644-5620680)
chr5 (58-94)||(9702714-9702750)
chr5 (60-100)||(14387898-14387938)
[»] scaffold0242 (1 HSPs)
scaffold0242 (58-425)||(2709-3053)
[»] chr8 (72 HSPs)
chr8 (58-425)||(44600067-44600416)
chr8 (58-425)||(38994050-38994400)
chr8 (58-411)||(22332005-22332334)
chr8 (58-415)||(19394839-19395173)
chr8 (193-415)||(36597429-36597646)
chr8 (194-415)||(23522055-23522271)
chr8 (113-424)||(44382127-44382420)
chr8 (113-399)||(7015544-7015806)
chr8 (194-415)||(6476888-6477104)
chr8 (206-415)||(41156971-41157183)
chr8 (58-314)||(42785618-42785856)
chr8 (117-415)||(41629265-41629529)
chr8 (194-415)||(38962545-38962773)
chr8 (58-314)||(27273681-27273919)
chr8 (194-415)||(3751490-3751700)
chr8 (58-314)||(14078130-14078368)
chr8 (113-314)||(33423613-33423797)
chr8 (194-314)||(9761717-9761837)
chr8 (218-425)||(42810359-42810554)
chr8 (113-415)||(19248491-19248784)
chr8 (113-415)||(19321675-19321968)
chr8 (215-415)||(22946211-22946411)
chr8 (113-414)||(41977876-41978161)
chr8 (58-314)||(5836045-5836281)
chr8 (113-413)||(41533186-41533468)
chr8 (58-314)||(30826840-30827077)
chr8 (280-415)||(38992889-38993020)
chr8 (113-310)||(4465823-4466007)
chr8 (113-314)||(45291817-45292005)
chr8 (343-415)||(45293110-45293182)
chr8 (206-310)||(25345015-25345123)
chr8 (113-193)||(12760804-12760884)
chr8 (113-193)||(25620133-25620213)
chr8 (113-310)||(7389704-7389887)
chr8 (58-193)||(36597312-36597446)
chr8 (119-193)||(23521997-23522071)
chr8 (362-415)||(9761644-9761697)
chr8 (362-415)||(33423817-33423870)
chr8 (362-415)||(42785545-42785598)
chr8 (132-188)||(22946152-22946208)
chr8 (113-269)||(25615859-25615998)
chr8 (362-415)||(5835972-5836025)
chr8 (58-173)||(44940445-44940559)
chr8 (117-179)||(42060723-42060785)
chr8 (58-173)||(6300489-6300601)
chr8 (206-310)||(25620209-25620317)
chr8 (362-415)||(27273608-27273661)
chr8 (367-415)||(30826770-30826818)
chr8 (58-178)||(37029836-37029956)
chr8 (366-413)||(14078392-14078439)
chr8 (113-162)||(41157180-41157229)
chr8 (206-262)||(12760752-12760808)
chr8 (56-94)||(23966381-23966419)
chr8 (58-100)||(24055840-24055882)
chr8 (113-173)||(9761841-9761901)
chr8 (117-173)||(23966448-23966504)
chr8 (58-94)||(42060662-42060698)
chr8 (118-173)||(25345139-25345194)
chr8 (57-100)||(40586442-40586485)
chr8 (58-100)||(18375558-18375600)
chr8 (58-100)||(36778479-36778521)
chr8 (58-100)||(41158643-41158685)
chr8 (58-99)||(2961009-2961050)
chr8 (58-99)||(27272686-27272727)
chr8 (58-95)||(41908014-41908051)
chr8 (132-172)||(3751705-3751745)
chr8 (58-94)||(7391327-7391363)
chr8 (58-94)||(12249912-12249948)
chr8 (58-94)||(23626056-23626092)
chr8 (132-168)||(38962782-38962818)
chr8 (58-94)||(39204870-39204906)
chr8 (58-94)||(39445259-39445295)
[»] chr4 (67 HSPs)
chr4 (58-415)||(28973714-28974051)
chr4 (58-415)||(53343062-53343395)
chr4 (58-415)||(19830700-19831035)
chr4 (58-415)||(2776929-2777263)
chr4 (58-415)||(38008913-38009249)
chr4 (114-415)||(55998071-55998350)
chr4 (196-415)||(33502425-33502639)
chr4 (58-415)||(22115354-22115689)
chr4 (194-415)||(35495024-35495239)
chr4 (114-415)||(17699828-17700107)
chr4 (58-415)||(37700901-37701235)
chr4 (58-415)||(41983532-41983871)
chr4 (113-415)||(39742353-39742632)
chr4 (194-415)||(36514762-36514978)
chr4 (113-415)||(17740693-17740977)
chr4 (58-396)||(21353690-21354005)
chr4 (133-407)||(19109135-19109387)
chr4 (194-415)||(13628707-13628922)
chr4 (113-411)||(47556780-47557060)
chr4 (58-314)||(23479626-23479865)
chr4 (58-426)||(36857709-36858043)
chr4 (58-314)||(5271602-5271840)
chr4 (58-314)||(34055891-34056128)
chr4 (116-415)||(7643166-7643430)
chr4 (194-312)||(14828956-14829074)
chr4 (211-415)||(40622803-40623003)
chr4 (58-270)||(54331070-54331264)
chr4 (331-415)||(8531470-8531554)
chr4 (113-310)||(2116579-2116764)
chr4 (328-415)||(7847676-7847763)
chr4 (58-193)||(15642363-15642497)
chr4 (113-193)||(39714899-39714979)
chr4 (113-193)||(52800852-52800932)
chr4 (113-310)||(12682157-12682340)
chr4 (113-310)||(46104653-46104837)
chr4 (132-193)||(14828911-14828972)
chr4 (58-193)||(35494909-35495040)
chr4 (117-193)||(33502363-33502439)
chr4 (58-183)||(28134708-28134830)
chr4 (80-187)||(36514665-36514772)
chr4 (113-177)||(40623018-40623082)
chr4 (362-415)||(5271860-5271913)
chr4 (362-415)||(14829096-14829149)
chr4 (362-415)||(23479552-23479605)
chr4 (117-173)||(740365-740421)
chr4 (206-262)||(15642493-15642549)
chr4 (206-262)||(39714975-39715031)
chr4 (362-405)||(34056148-34056191)
chr4 (58-104)||(14828803-14828849)
chr4 (117-178)||(15520989-15521050)
chr4 (206-262)||(52800800-52800856)
chr4 (58-94)||(15521074-15521110)
chr4 (57-100)||(12680629-12680672)
chr4 (56-99)||(43014589-43014632)
chr4 (58-100)||(574177-574219)
chr4 (58-100)||(2118190-2118232)
chr4 (58-100)||(3759279-3759321)
chr4 (58-100)||(5759341-5759383)
chr4 (58-100)||(35707658-35707700)
chr4 (58-100)||(37352100-37352142)
chr4 (58-100)||(37356999-37357041)
chr4 (58-100)||(39713496-39713538)
chr4 (58-100)||(51348066-51348108)
chr4 (58-99)||(15650486-15650527)
chr4 (58-99)||(19591081-19591122)
chr4 (194-226)||(14828872-14828904)
chr4 (58-94)||(39404592-39404628)
[»] chr3 (65 HSPs)
chr3 (58-425)||(16342277-16342619)
chr3 (58-425)||(18741517-18741861)
chr3 (58-415)||(51248935-51249269)
chr3 (193-411)||(54648297-54648510)
chr3 (58-415)||(52852744-52853078)
chr3 (196-415)||(50742004-50742218)
chr3 (194-415)||(21698994-21699210)
chr3 (114-415)||(54513416-54513701)
chr3 (58-415)||(8243122-8243473)
chr3 (113-415)||(23194820-23195109)
chr3 (58-415)||(52462215-52462554)
chr3 (113-415)||(52842211-52842498)
chr3 (113-415)||(48520379-48520663)
chr3 (58-314)||(50770559-50770797)
chr3 (58-314)||(6103433-6103671)
chr3 (113-415)||(55294120-55294404)
chr3 (58-415)||(54934437-54934775)
chr3 (58-411)||(49113700-49114018)
chr3 (215-415)||(32756145-32756345)
chr3 (194-314)||(19406744-19406864)
chr3 (113-415)||(40824009-40824293)
chr3 (113-401)||(39092972-39093241)
chr3 (58-314)||(31368327-31368566)
chr3 (58-314)||(35087163-35087390)
chr3 (330-415)||(2843461-2843546)
chr3 (194-310)||(4138190-4138310)
chr3 (328-415)||(11597496-11597583)
chr3 (193-294)||(2839632-2839733)
chr3 (113-310)||(26777272-26777456)
chr3 (58-188)||(32756348-32756477)
chr3 (114-193)||(21698931-21699010)
chr3 (344-415)||(48977310-48977381)
chr3 (58-193)||(19353702-19353836)
chr3 (58-193)||(11597309-11597442)
chr3 (117-178)||(39796413-39796474)
chr3 (58-193)||(19406626-19406760)
chr3 (366-415)||(6103700-6103749)
chr3 (362-415)||(31368586-31368638)
chr3 (362-415)||(50770817-50770870)
chr3 (114-191)||(54648235-54648312)
chr3 (60-172)||(48988911-48989022)
chr3 (194-270)||(48977676-48977754)
chr3 (244-310)||(53800998-53801068)
chr3 (362-415)||(35087410-35087461)
chr3 (116-173)||(4138129-4138186)
chr3 (117-173)||(5252314-5252370)
chr3 (58-173)||(50742224-50742337)
chr3 (58-100)||(26100778-26100820)
chr3 (58-94)||(5252254-5252290)
chr3 (57-99)||(188736-188778)
chr3 (58-100)||(4137400-4137442)
chr3 (58-100)||(8396765-8396807)
chr3 (58-100)||(18688673-18688715)
chr3 (58-100)||(22477905-22477947)
chr3 (58-100)||(35861001-35861043)
chr3 (58-100)||(52843184-52843226)
chr3 (328-365)||(19406873-19406910)
chr3 (58-99)||(26035814-26035855)
chr3 (57-94)||(39796354-39796391)
chr3 (58-94)||(5240993-5241029)
chr3 (58-94)||(21165931-21165967)
chr3 (58-94)||(22522276-22522312)
chr3 (58-94)||(26776434-26776470)
chr3 (57-101)||(39576532-39576576)
chr3 (58-94)||(44186859-44186895)
[»] chr6 (57 HSPs)
chr6 (193-415)||(17940136-17940353)
chr6 (58-415)||(18312406-18312741)
chr6 (58-415)||(35041704-35042038)
chr6 (58-415)||(22373140-22373474)
chr6 (194-413)||(15276254-15276468)
chr6 (231-415)||(4425101-4425281)
chr6 (194-415)||(33320864-33321084)
chr6 (58-314)||(18598305-18598543)
chr6 (58-314)||(21800230-21800468)
chr6 (58-314)||(11932802-11933040)
chr6 (58-314)||(33814680-33814918)
chr6 (58-314)||(1072583-1072821)
chr6 (194-415)||(7222927-7223131)
chr6 (194-314)||(34856641-34856761)
chr6 (113-415)||(14832099-14832383)
chr6 (195-415)||(34321711-34321919)
chr6 (194-314)||(14887376-14887496)
chr6 (194-415)||(25540548-25540775)
chr6 (334-425)||(30044814-30044905)
chr6 (58-193)||(2521931-2522065)
chr6 (113-310)||(4108441-4108625)
chr6 (113-287)||(35158714-35158870)
chr6 (238-314)||(2521856-2521932)
chr6 (113-193)||(1220345-1220425)
chr6 (113-193)||(9979441-9979521)
chr6 (113-193)||(24445754-24445834)
chr6 (113-193)||(4425293-4425373)
chr6 (362-415)||(2521781-2521834)
chr6 (362-415)||(11933060-11933113)
chr6 (362-415)||(14887516-14887569)
chr6 (362-415)||(18598563-18598616)
chr6 (362-415)||(33814607-33814660)
chr6 (114-193)||(14887313-14887392)
chr6 (362-415)||(1072841-1072894)
chr6 (58-187)||(15276458-15276584)
chr6 (362-415)||(21800157-21800210)
chr6 (362-415)||(34856568-34856621)
chr6 (206-262)||(1220293-1220349)
chr6 (206-262)||(24445702-24445758)
chr6 (236-310)||(28573340-28573418)
chr6 (114-173)||(33320801-33320860)
chr6 (58-173)||(25540779-25540890)
chr6 (206-262)||(9979517-9979573)
chr6 (114-173)||(17940356-17940415)
chr6 (113-171)||(34321926-34321984)
chr6 (60-100)||(11168916-11168956)
chr6 (58-94)||(13456735-13456771)
chr6 (117-173)||(13456793-13456849)
chr6 (113-173)||(34856765-34856825)
chr6 (58-100)||(4110060-4110102)
chr6 (58-100)||(6966237-6966279)
chr6 (58-172)||(7223136-7223249)
chr6 (58-104)||(22323782-22323828)
chr6 (58-100)||(24447794-24447836)
chr6 (58-99)||(18389168-18389209)
chr6 (273-314)||(30044919-30044960)
chr6 (58-99)||(33319049-33319090)
[»] chr1 (58 HSPs)
chr1 (58-415)||(44407000-44407335)
chr1 (58-411)||(38844474-38844814)
chr1 (113-413)||(52310476-52310758)
chr1 (47-415)||(45005410-45005758)
chr1 (58-314)||(34692828-34693060)
chr1 (58-314)||(31620402-31620640)
chr1 (194-415)||(48340955-48341176)
chr1 (58-314)||(34688300-34688532)
chr1 (58-412)||(36682681-36683016)
chr1 (58-314)||(41829350-41829588)
chr1 (194-415)||(50561689-50561907)
chr1 (114-314)||(52520972-52521155)
chr1 (58-415)||(17672090-17672428)
chr1 (215-415)||(12245304-12245505)
chr1 (200-314)||(18814932-18815046)
chr1 (211-314)||(41962362-41962465)
chr1 (116-314)||(47136010-47136195)
chr1 (58-188)||(12245172-12245301)
chr1 (194-404)||(51965252-51965451)
chr1 (194-314)||(10694196-10694320)
chr1 (132-314)||(16030959-16031128)
chr1 (116-310)||(5426715-5426896)
chr1 (57-178)||(24294791-24294911)
chr1 (328-411)||(10694347-10694430)
chr1 (113-310)||(16300781-16300966)
chr1 (330-415)||(16031156-16031241)
chr1 (113-193)||(4891927-4892007)
chr1 (113-193)||(29186480-29186560)
chr1 (113-193)||(33361530-33361610)
chr1 (362-415)||(18814859-18814912)
chr1 (362-415)||(34688227-34688280)
chr1 (133-185)||(41962310-41962362)
chr1 (116-187)||(10694135-10694206)
chr1 (362-425)||(34692745-34692808)
chr1 (58-173)||(50394967-50395082)
chr1 (362-415)||(31620329-31620382)
chr1 (113-178)||(39760073-39760138)
chr1 (362-415)||(41829608-41829661)
chr1 (362-415)||(52521175-52521228)
chr1 (114-173)||(18815056-18815115)
chr1 (362-415)||(41962486-41962539)
chr1 (206-262)||(4891875-4891931)
chr1 (194-270)||(17707301-17707377)
chr1 (206-262)||(29186556-29186612)
chr1 (206-262)||(33361478-33361534)
chr1 (117-173)||(43254612-43254668)
chr1 (113-173)||(50561911-50561971)
chr1 (58-94)||(43254555-43254591)
chr1 (58-100)||(4893967-4894009)
chr1 (58-100)||(10763587-10763629)
chr1 (58-100)||(29840690-29840732)
chr1 (58-100)||(38896814-38896856)
chr1 (58-100)||(42682591-42682633)
chr1 (58-100)||(52037391-52037433)
chr1 (58-99)||(3929748-3929789)
chr1 (58-99)||(28565430-28565471)
chr1 (58-94)||(28631816-28631852)
chr1 (58-94)||(47137864-47137900)
[»] scaffold0110 (1 HSPs)
scaffold0110 (58-425)||(48526-48869)
[»] scaffold1634 (2 HSPs)
scaffold1634 (194-415)||(440-656)
scaffold1634 (66-193)||(330-456)
[»] chr7 (52 HSPs)
chr7 (194-415)||(11500495-11500711)
chr7 (113-415)||(33031494-33031773)
chr7 (113-415)||(42688190-42688470)
chr7 (58-415)||(17470367-17470702)
chr7 (58-415)||(17582512-17582847)
chr7 (206-415)||(17478549-17478753)
chr7 (206-415)||(17482984-17483188)
chr7 (206-415)||(17570026-17570230)
chr7 (206-415)||(17574461-17574665)
chr7 (194-415)||(27734456-27734676)
chr7 (58-415)||(47175098-47175435)
chr7 (116-415)||(23299069-23299350)
chr7 (194-415)||(9149960-9150181)
chr7 (113-415)||(42918499-42918784)
chr7 (58-314)||(8925226-8925464)
chr7 (113-415)||(33638017-33638301)
chr7 (133-371)||(5963364-5963581)
chr7 (58-415)||(42826647-42826984)
chr7 (58-415)||(19521785-19522106)
chr7 (206-314)||(23765885-23765993)
chr7 (58-314)||(14309563-14309815)
chr7 (114-310)||(4848834-4849017)
chr7 (113-310)||(49145635-49145819)
chr7 (113-266)||(48528137-48528273)
chr7 (113-193)||(17170853-17170933)
chr7 (114-270)||(39649328-39649467)
chr7 (113-266)||(31898168-31898304)
chr7 (362-415)||(8925484-8925537)
chr7 (362-415)||(23766013-23766066)
chr7 (362-415)||(14309490-14309543)
chr7 (206-262)||(17170801-17170857)
chr7 (117-173)||(6911419-6911475)
chr7 (113-173)||(9150185-9150245)
chr7 (117-173)||(47573397-47573453)
chr7 (57-94)||(6911358-6911395)
chr7 (114-163)||(11500718-11500767)
chr7 (113-173)||(27734394-27734452)
chr7 (58-94)||(42996946-42996982)
chr7 (58-94)||(47573333-47573369)
chr7 (58-100)||(691288-691330)
chr7 (58-100)||(15595424-15595466)
chr7 (58-100)||(21669232-21669274)
chr7 (58-100)||(27732953-27732995)
chr7 (58-100)||(31896814-31896856)
chr7 (58-100)||(39278237-39278279)
chr7 (58-100)||(39647982-39648024)
chr7 (58-99)||(12960607-12960648)
chr7 (60-100)||(9151418-9151458)
chr7 (58-94)||(9226021-9226057)
chr7 (58-94)||(17817724-17817760)
chr7 (56-104)||(23762345-23762393)
chr7 (58-94)||(38434278-38434314)
[»] scaffold0121 (1 HSPs)
scaffold0121 (58-411)||(14619-14957)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-415)||(101342-101680)
[»] scaffold0047 (4 HSPs)
scaffold0047 (194-415)||(25767-25983)
scaffold0047 (132-193)||(25722-25783)
scaffold0047 (58-104)||(25614-25660)
scaffold0047 (194-226)||(25683-25715)
[»] scaffold0045 (1 HSPs)
scaffold0045 (58-415)||(12214-12552)
[»] scaffold0032 (4 HSPs)
scaffold0032 (194-415)||(4371-4588)
scaffold0032 (194-415)||(10820-11037)
scaffold0032 (114-173)||(4308-4367)
scaffold0032 (114-173)||(10757-10816)
[»] scaffold0010 (3 HSPs)
scaffold0010 (264-415)||(177091-177237)
scaffold0010 (196-415)||(120537-120755)
scaffold0010 (132-173)||(120761-120802)
[»] scaffold0171 (1 HSPs)
scaffold0171 (58-385)||(29639-29939)
[»] scaffold1891 (2 HSPs)
scaffold1891 (194-314)||(133-253)
scaffold1891 (113-193)||(237-317)
[»] scaffold0122 (3 HSPs)
scaffold0122 (194-314)||(5203-5323)
scaffold0122 (362-415)||(5130-5183)
scaffold0122 (113-193)||(5307-5387)
[»] scaffold0079 (2 HSPs)
scaffold0079 (206-415)||(10151-10358)
scaffold0079 (116-173)||(10078-10135)
[»] scaffold0005 (5 HSPs)
scaffold0005 (194-312)||(10635-10753)
scaffold0005 (362-415)||(10560-10613)
scaffold0005 (58-104)||(10860-10906)
scaffold0005 (132-173)||(10757-10798)
scaffold0005 (194-226)||(10805-10837)
[»] scaffold0169 (1 HSPs)
scaffold0169 (58-193)||(16986-17124)
[»] scaffold0115 (3 HSPs)
scaffold0115 (340-415)||(579-656)
scaffold0115 (200-314)||(3142-3259)
scaffold0115 (113-173)||(3269-3329)
[»] scaffold0057 (3 HSPs)
scaffold0057 (113-193)||(18760-18840)
scaffold0057 (206-262)||(18836-18892)
scaffold0057 (58-100)||(17401-17443)
[»] scaffold0069 (3 HSPs)
scaffold0069 (113-193)||(13560-13640)
scaffold0069 (206-262)||(13508-13564)
scaffold0069 (58-100)||(14647-14689)
[»] scaffold0009 (1 HSPs)
scaffold0009 (113-184)||(231809-231880)
[»] scaffold0027 (1 HSPs)
scaffold0027 (58-99)||(143214-143255)
[»] scaffold0249 (1 HSPs)
scaffold0249 (58-99)||(24919-24960)
[»] scaffold0103 (1 HSPs)
scaffold0103 (58-99)||(13023-13064)
[»] scaffold0484 (1 HSPs)
scaffold0484 (58-94)||(8176-8212)
[»] scaffold0231 (1 HSPs)
scaffold0231 (58-94)||(10799-10835)
[»] scaffold0088 (1 HSPs)
scaffold0088 (58-94)||(52693-52729)


Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 58 - 425
Target Start/End: Complemental strand, 33908233 - 33907888
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||||||||||| | ||||||||||||||| |||||||||||||    
T  33908233 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtgattca 33908134  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||||||||||||||||| ||||                 |||||||||||||||||||||||||||||||||||||||||||||||    
T  33908133 tcataaaatatgtatgagctgattaagagagtatat-----------------aatcagtttatgagaatacaaattgacataatatttaggatgaaaac 33908051  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  33908050 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaagg 33907956  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  33907955 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 33907888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 26828501 - 26828166
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||         |||||||||||| | ||||||||||||||| |||||||||||||    
T  26828501 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatcttcgaaagaagagatattaaaacgacggaacattgtgattca 26828402  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||||||||||||||||||||                 ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26828401 tcataaaatatgtatgagctgattaagagagcat-----------------ataattagtttatgagaatacaaattgacataatatttaggatgaaaac 26828319  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  26828318 aattggaaccaataaagaaactaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaagg 26828224  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26828223 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 26828166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 58 - 425
Target Start/End: Complemental strand, 11707615 - 11707271
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        | ||||||||||| | ||||||||||||||| |||||||||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaat-cttcgaaagaagagatattaaaacgacggaacattgtgattca 11707517  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11707516 tcataaaatatgtatgagctgattaagagagcat-----------------ataatcagtttatgagaatacaaattggcataatatttaggatgaaaac 11707434  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  11707433 aattgaaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaagg 11707339  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  11707338 attgatacccatatttacattaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 11707271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 5253336 - 5253001
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||         |||| ||||||| | || |||||||||||| |||||||||||||    
T  5253336 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaactctttgaaagaagagatgttaaaacgacggaacattgtgattca 5253237  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  5253236 tcataaaatatgtatgtgctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaaac 5253154  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             | ||||||||||||||||||  |||||| |    
T  5253153 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagagttgttgttatagagttaataaaaaatg 5253059  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| |||||| |||| |||||||||||| |||||||||| ||| |||||||||    
T  5253058 attgatacacatattcacataaaatgaaatcaaacaaagaagtaacattggtgagtga 5253001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 19167150 - 19167483
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||        | ||||||||||| | || |||||||||||| |||||||||||||    
T  19167150 actagttacaaacccgtgct-cgcacgggttcaataacgtattcgataaaaaaaat-cttcgaaagaagagatgttaaaacgacggaacattgtgattca 19167247  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    | |||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  19167248 ttataaaatatgtatgggctgat-----------------taagagaacatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 19167330  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||              ||||||||||||||| ||| ||||||| |    
T  19167331 aattggaaccaataaaggaaccattgatgtgtgaatttacatattatccaaaattataaaaaagaa-----tgttgttgttatagaattatcaaaaaatg 19167425  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  19167426 attgatacccatatttacatcaaatgaaatcaagcaaagaagtaacatcgatgagtga 19167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 30569957 - 30570173
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30569957 tgattaagagagcatataatcagtttataagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 30570056  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  30570057 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgttactcatatttacatcaaatgaaatcaagca 30570151  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||| ||||||||    
T  30570152 aagaagtagcatcagtgagtga 30570173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 36632454 - 36632675
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  36632454 tgattaagagagcatataatcagtttatgagattatgaattgacataatatttaggatgaaaacaattggaaccaataaatgaaccaatgatgtttgaat 36632553  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     |||||||||||| |||||||             ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  36632554 tatgattacatattatcccaaattataaaataga-----gtgttattgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaata 36632648  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||    
T  36632649 aagcaaagaagtagcatcggtgagtga 36632675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 45399793 - 45399454
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||| ||||||||||||||||| ||| ||||||||||| ||||| ||        ||||||||||||| | || |||||||||||| |||||||||||||    
T  45399793 actaattacaaacccgtgcttcccacgggttcaataatatattcaataaaaaaa-ttcttcgaaagaagagatgttaaaacgacggaacattgtgattca 45399695  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||| ||||||||||| ||  |||||||||||||||||||||||||||    
T  45399694 tcataaaatatgtatgggctgattaagagagcat-----------------ataattagtttatgagattaggaattgacataatatttaggatgaaaac 45399612  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| || |||||||||||||||     |||||||||||||||||||||             |  ||||||||||||||||||||||    
T  45399611 aattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagaattgttgttatagagttaccaaa 45399517  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||| | || ||||||| |||||||||||||||||  ||||||||    
T  45399516 aaaggattgatacccatatttaaaacagatgaaatgaagcaaagaagtagcattagtgagtga 45399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 1514326 - 1514610
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||| |                 |||||| ||||| |||||||    
T  1514326 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcatgaaatatgtatggg-----------------ttgatttagagatcatataa 1514408  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||     ||||| |||||||    
T  1514409 tcagtttatgagattaagaattgacataatatttaggatgaaaacaattggaaccaaaaaagaa-ccaatgatgtgtgaattacgattacatgttatcca 1514507  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  1514508 aaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgataccgatatttacatcagatgaaatcaagcaaagaaatagcatcg 1514602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 26822598 - 26822360
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  26822598 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 26822500  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  26822499 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgatattaggaattgacataatatttaggatgaaaac 26822417  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26822416 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 26822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 42886327 - 42886041
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||| ||||||| | || |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||                 ||    
T  42886327 ttctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagcgcatat-----------------aa 42886245  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||  | |||||||||| |||||||| |||||||||| ||||    
T  42886244 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaatga-ccaatgatgtatgaatttaaatattatccagaatt 42886146  T
Q  313 atnnnnnnnnnnnnng--tgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtg 410  Q
    ||                ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  42886145 ataaaaaaaaaaaaaaaatgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaagtgaaatcaagcaaagaagtagcatcggtg 42886046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 58 - 411
Target Start/End: Complemental strand, 4812532 - 4812185
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||        ||||||||||||| | ||||||||||||||| |||||||||||||    
T  4812532 actagttacaaacccgtgcttcgcacgagttcaaaaatgtattcgattaaaaaa-ttcttcgaaagaagagatattaaaacgacggaacattgtgattca 4812434  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||  |||       || | ||      ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  4812433 tcataaaatatc-atg-------tatggga------tgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaac 4812348  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat----nnnnnnnnnnnnngtgttgttgttatagagttac 348  Q
    ||||||||||||||||| || |||||||||||||||     |||||||||||| ||||||||                 |||||||||||||||||| ||    
T  4812347 aattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatcgaaaattataaaataaaataaaaagagtgttgttgttatagagtgac 4812248  T
Q  349 caaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
     ||||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| ||||    
T  4812247 aaaaaaaggattgatacccatatttaaaacagatgaaatcaggcaaagaactagcatcagtga 4812185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 58 - 414
Target Start/End: Original strand, 45204295 - 45204643
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||||||| ||||||||||  |||| |||        ||||| ||||||| | || |||||||||| | |||||||||||||    
T  45204295 actagttacaaactcgtgcttcgcacgggttcaataacatatttgataaaaaaa-ttctttgaaagaagagatgttaaaacgacagaacattgtgattca 45204393  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||||| ||||| |                 ||||||||| ||||| ||| |||||||||||||||||  ||||||||    
T  45204394 tcataaaatatgtatgggctgattaagaaagcatct-----------------aatcagtttctgagattacgaattgacataatatttaaaatgaaaac 45204476  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnn-----gtgttgttgttatagagtta 347  Q
    ||||||||| ||||||| |||||||||||||||||||     |||||||||||||||||||                   ||||| |||| ||||| |||    
T  45204477 aattggaactaataaaggaaccaatgatgtgtgaattatgattacatattatccaaaattacaaaaaaataaaaaataaagtgtttttgtcatagaatta 45204576  T
Q  348 ccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtg 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  45204577 ccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtg 45204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 57 - 314
Target Start/End: Original strand, 19125999 - 19126238
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattc 156  Q
    ||||||||||||||||||||   |||| |||||||||| |||||||||        | ||| ||||||| | || |||||| ||||| ||||||||||||    
T  19125999 cactagttacaaacccgtgcgaagcacgggttcaataacgtattcgataaaaaaaat-ctttgaaagaagagatgttaaaatgacggaacattgtgattc 19126097  T
Q  157 atcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaa 256  Q
    ||||||||||||||||||||||||                 ||||||| |||||||||||||||||| | ||  ||||||||||||||||||||||||||    
T  19126098 atcataaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaa 19126180  T
Q  257 caattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  19126181 taattggaaccaataaaggaaccaatgatatgtgaatttacatattatccaaaattat 19126238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 11448682 - 11448398
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    |||||||||| || | || |||||||||||| ||||||||||||||||||||||||||||| |                 |||||||||| | || ||||    
T  11448682 ttcttcgaaaaaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggg-----------------ttgattaagaaagcaaataa 11448600  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||| ||| ||  ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||     ||||||||||||||    
T  11448599 tcagtttataagattaggaattgacataatatttaagatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaattatgattacatattatcca 11448500  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |     
T  11448499 aaattat-----aaaaaagagtgtt-ttgttatggagttaccaaaaaagaattgatactcatatttacatcaaatgaaatcaagcaaagaagtagaaaca 11448406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 16723662 - 16723901
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||         |||| ||||||| | || |||||||||||| |||||||||||||    
T  16723662 actagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaaatctttgaaagaagagatgttaaaacgacggaacattgtgattca 16723761  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||  |||||| ||||||||||                 |||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  16723762 tcataaaatatgtatggcctgatttagagagcata-----------------taatcagtttatgagattaggaattgacataatatttagaatgaaaac 16723844  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     ||| |||||||||||  || ||||||||||||||||||||||||||| ||||||||    
T  16723845 tatttgaaccaataaaagaatcaatgatgtgtgaatttacatattatcgaaaattat 16723901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 33663115 - 33663292
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcag 216  Q
    ||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||                 ||||||||    
T  33663115 tcgaaagaagatatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcat-----------------ataatcag 33663197  T
Q  217 tttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  33663198 tttatgagattagtaattgacataatatttag-atgaaaacaattgaaaccaataaatgaaccaatgatgtgtgaatttacatattatccaaaatt 33663292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 314
Target Start/End: Complemental strand, 21098656 - 21098429
Alignment:
Q  69 acccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatat 168  Q
    ||||||||||||||| |||||||||| |||||| ||        ||||| ||||||| | || ||||||||| || ||||||||||||||||||||||||    
T  21098656 acccgtgcttcgcacgggttcaataacgtattc-attaaaaaaattctttgaaagaagagatgttaaaacgatggaacattgtgattcatcataaaatat 21098558  T
Q  169 gtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaacca 268  Q
    ||||| |||||||||||||||||                 ||||||||||||||||| ||  ||||||||||||||||| ||||||||  ||||||||||    
T  21098557 gtatgggctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttatgatgaaaattattggaacca 21098475  T
Q  269 ataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||    
T  21098474 ataaaggaatcaatgatgtgtggatttacatattacccaaaattat 21098429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 35285584 - 35285713
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||        ||||||||||||| | || |||||||||||| |||||||||||||    
T  35285584 actagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaaa-ttcttcgaaagaagagatgttaaaacgacggaacattgtgattca 35285682  T
Q  158 tcataaaatatgtatgagctgattaagagag 188  Q
    |||||||||||||||||||||||||||||||    
T  35285683 tcataaaatatgtatgagctgattaagagag 35285713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 233 - 415
Target Start/End: Original strand, 35285734 - 35285916
Alignment:
Q  233 ttgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnn 327  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |||||||||| |||||     |||||||||| |||||||||                 
T  35285734 ttgacataatatttatgatgaaaacaattggaaccaataaaggaaacaatgatgtgggaattatgattacatattattcaaaattataaaaaaga----- 35285828  T
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| | || ||||||||||||||| |||||||||| ||||||||    
T  35285829 gtgttgttgttataaagttaccaaaaaatgattgatacccatatttaaaacagatgaaatcaagcaaataagtagcatcagtgagtga 35285916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 415
Target Start/End: Original strand, 27364276 - 27364461
Alignment:
Q  231 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnn 325  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||     |||||||||||||||||||||               
T  27364276 aattgacatcatatttaggatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaa 27364370  T
Q  326 nngtgttgttgttatagagttacc-aaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
      | |||||||||||||||||||| ||||||||||||||||||||||||| | || ||||||| ||||||| |||||||||  ||||||||    
T  27364371 gagcgttgttgttatagagttaccaaaaaaaggattgatacccatatttaaaacagatgaaatgaagcaaaaaagtagcattagtgagtga 27364461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 18092075 - 18092345
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||| |||||                 ||    
T  18092075 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctaatttagagatcatat-----------------aa 18092157  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||            ||||||||||||     |||||||||||||    
T  18092158 tcagtttatgaaattaggaattgacataatatttaggatgaaaacaattggaaccaat------------gatgtgtgaattatgattacatattatcca 18092245  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||   |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||    
T  18092246 aaattataaaaaaga-----gtgttgttgt---agagttgccaaaaaaggattgatacccatatttacatcagatgaaatcaaataaataagtagcatcg 18092337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 346 - 415
Target Start/End: Original strand, 33663352 - 33663421
Alignment:
Q  346 taccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33663352 taccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 33663421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 27364142 - 27364270
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||| ||||||||  ||||||||||| ||||||||||||||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  27364142 actaattacaaacttgtgcttcgcacgggttcaataatgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 27364240  T
Q  158 tcataaaatatgtatgagctgattaagaga 187  Q
    |||||||||||||||||| |||||||||||    
T  27364241 tcataaaatatgtatgagatgattaagaga 27364270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 9543994 - 9544130
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||                 ||||| ||||| |||||||    
T  9543994 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagc-----------------tgatttagagatcatataa 9544076  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaac 266  Q
    ||||||||||||| ||  |||||||||||| |||||||||||||||||||||||    
T  9544077 tcagtttatgagattaggaattgacataatttttaggatgaaaacaattggaac 9544130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 270
Target Start/End: Original strand, 10048371 - 10048511
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||                 ||||| ||||| |||||||    
T  10048371 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggc-----------------tgatttagagatcatataa 10048453  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 270  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||    
T  10048454 tcagtttatgagattaggaattgacataatatttaggatgaaaataattggaaccaat 10048511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 4291028 - 4291108
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  4291028 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 4291108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 18137942 - 18137828
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  18137942 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 18137844  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  18137843 tcataaaatatgtatg 18137828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 16723921 - 16723974
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16723921 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 16723974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 21098409 - 21098356
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21098409 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 21098356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 28608517 - 28608446
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaag 184  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  28608517 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgactaag 28608446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 36632396 - 36632470
Alignment:
Q  119 gaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||| | || |||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  36632396 gaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatatatggactgattaagagagcatat 36632470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 19126256 - 19126309
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  19126256 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 19126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 26822340 - 26822287
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  26822340 atacccatattgacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 26822287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 4291104 - 4291160
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  4291104 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 4291160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 14323269 - 14323325
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  14323269 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 14323325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 6342787 - 6342846
Alignment:
Q  119 gaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctg 178  Q
    ||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  6342787 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctg 6342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 28502501 - 28502440
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctg 178  Q
    ||||||||| |||| |||||||||||| | ||| ||||||||||||||||||||||| ||||    
T  28502501 tcgaaagaagatatgttaaaacgacggaatattatgattcatcataaaatatgtatgggctg 28502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 1992939 - 1992986
Alignment:
Q  46 tttttattgcacactagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  1992939 tttttatt-cacactagttacaaacccgtgcttcgcacgggttcaataa 1992986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 1993010 - 1993066
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||    
T  1993010 tcgaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 1993066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 9916707 - 9916749
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaataacgtatt 9916749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 4289028 - 4289070
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  4289028 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 4289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 37224056 - 37224018
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatg 96  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  37224056 actagttacaaacccgtgcttcgcacgggttcagtaatg 37224018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 7364821 - 7364780
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  7364821 actagttacaaacccgtgcttcgcacgggttgaataacgtat 7364780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 6342729 - 6342765
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  6342729 actagttacaaacccgtgcttcgcacgggtttaataa 6342765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 9542630 - 9542666
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  9542630 actagttacaaacccgtgcttcgcacgggttgaataa 9542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 14323211 - 14323247
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  14323211 actagttacaaacccgtgtttcgcacgggttcaataa 14323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 28502562 - 28502526
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||||||||  |||||||||    
T  28502562 actagttacaaacccgtgcttcgcacgagttcaataa 28502526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 58 - 425
Target Start/End: Original strand, 34373669 - 34374015
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||| ||||| |||||||||        ||||||||||||| | || |||||||||||| | |||||||||||    
T  34373669 actagttacaaacccgtgcttcgcacgggtttaataacgtattcgataaaaaaaattcttcgaaagaagagatgttaaaacgacggaatattgtgattca 34373768  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||                 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34373769 tcataaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 34373851  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||  ||||||||||||||||||||| ||    
T  34373852 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat----aaaaaaagagtgtccttgttatagagttaccaaaaaggg 34373947  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  34373948 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 34374015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 58 - 413
Target Start/End: Original strand, 35539210 - 35539543
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||   |||| ||||||||||  ||||||||         |||| ||||||||| ||||||||||||||| ||||||||| |||    
T  35539210 actagttacaaacccgtgcgaagcacgggttcaataacatattcgataaaaaaaaatctttgaaagaaaagatattaaaacgacggaacattgtgactca 35539309  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||| |||||||||||||||                 ||||| |||||||||||||||||||||||||||||||||||||||||    
T  35539310 tcataaaatatgtatgagctaattaagagagcatat-----------------aatcaatttatgagaatacaaattgacataatatttaggatgaaaac 35539392  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  35539393 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaaaagtgttgttgttatagagttaccaaaaaagg 35539487  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 413  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35539488 attgatacccatatttacatcaaatgaaatcaagcaaagaaggagcatcggtgagt 35539543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 17997501 - 17997166
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  17997501 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattctttgaaagaagagatgttaaaacgacggaacattgtgattca 17997402  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  17997401 tcataaaatatgtatgtgctgattaagagagcat-----------------ataattagtttatgagattcgaaattgacataatatttaggatgaaaac 17997319  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||             |||||||||||||||||||||||||||| |    
T  17997318 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattacccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 17997224  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||    
T  17997223 attgatacccatattcacatcaaatgaaatcaaacaaagaagtatcattggtgagtga 17997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 20350866 - 20350533
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||         ||||| |||||||   ||  ||||||||||| |||||||||||||    
T  20350866 actagttacaaacccgtgcttcgcacgggttcaataacgtatttga--aaaataattctttgaaagaagtgatgctaaaacgacggaacattgtgattca 20350769  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 |||| |||||||||||| ||  |||||||||||||||||||||||||||    
T  20350768 tcataaaatatgtatgggctgattaagagagcat-----------------ataagcagtttatgagattaggaattgacataatatttaggatgaaaac 20350686  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||| |    
T  20350685 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattgt-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 20350591  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20350590 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcgatgagtga 20350533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 1851365 - 1851581
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1851365 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 1851464  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  1851465 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaaaca 1851559  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    || |||||||||||||||||||    
T  1851560 aacaagtagcatcggtgagtga 1851581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 3150009 - 3150225
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| ||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  3150009 tgattaagagagcatataatcagtttatgagataaggaattgacataatatttagaatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 3150108  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    ||| |||||||||||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3150109 ttatatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagca 3150203  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  3150204 aagaagtagcatcggtgagtga 3150225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 3029632 - 3029353
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || ||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||                 ||||    
T  3029632 ttcttcgaaagaagaaatgttaaaacgaaggaatattgtgattcatcataaaatatgtatgagctgattaagagagcat-----------------ataa 3029550  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    | ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3029549 ttagtttatgaaattagaaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaatt 3029450  T
Q  313 atnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 412  Q
    ||              ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3029449 ataaaaaagaa-----tgttgttgttatagagttaccaaaaaatgattgatacccatatttacat-aaatgaaatcaagcaaagaagtaacatcggtgag 3029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 21030923 - 21030707
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21030923 tgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaactaataaaggaaccaatgatgtgtgaat 21030824  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |    
T  21030823 ttacatattatccaaaattat-----aaaaaagagtgttgttgttgtagagttaccaaaaaaggattgatagccatatttacatcagatgaaatcaagta 21030729  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||| ||||||||||||||||    
T  21030728 aagaattagcatcggtgagtga 21030707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 27066686 - 27066470
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  |||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27066686 tgattaagagagcatataatcagtttatgagattaggaattaatataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 27066587  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27066586 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatagccatatttacatcaaatgaaatcaagca 27066492  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||| ||||||||||||||||    
T  27066491 aagaaatagcatcggtgagtga 27066470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 192 - 415
Target Start/End: Complemental strand, 19448811 - 19448593
Alignment:
Q  192 attgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtga 291  Q
    ||||||||||||| |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||    
T  19448811 attgattaagagagcatataatcagtttataagattatgaattgacataatatttaggatgaaaacaattggaaccaataaatgaactaatgatatgtga 19448712  T
Q  292 atttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaag 391  Q
    |||||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19448711 atttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaag 19448617  T
Q  392 caaagaagtagcatcggtgagtga 415  Q
     |||||||||||||||||||||||    
T  19448616 taaagaagtagcatcggtgagtga 19448593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 20995179 - 20995518
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||   ||||  ||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  20995179 actagttacaaacccgtgcgaagcacgagttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 20995277  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||  |||||||| |||||||||                 ||||||||||||||| ||  |||||||||||||||||||||||||||    
T  20995278 tcataaaatatgtatggactgattaaaagagcatat-----------------aatcagtttatgagattaggaattgacataatatttaggatgaaaac 20995360  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| |||||||||||| ||||||     ||||||||||||||||||||             |||||||||||||||||||||||||    
T  20995361 aattggaaccaataaaggaaccaatgatgtttgaattatgattacatattatccaaaattataaaataga-----gtgttgttgttatagagttaccaaa 20995455  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20995456 aaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 20995518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 116 - 407
Target Start/End: Original strand, 287071 - 287343
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||                 ||||||| ||||||||||    
T  287071 ttcgaaagaaaatatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgat-----------------taagagatcatataatca 287153  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 310  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||     |||||||||||||||||    
T  287154 gtttatgagattaggaattgacataatatttaggatgaaaacaattggaacca--aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 287251  T
Q  311 ttatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    ||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  287252 ttat-----aaaaaagagtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatcg 287343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 60 - 415
Target Start/End: Complemental strand, 20758876 - 20758543
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatc 159  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||            | ||||||| | || |||||||||||| |||||||||||||||    
T  20758876 tagttataaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaaaaattgaaagaagagatgttaaaacgacggaacattgtgattcatc 20758777  T
Q  160 ataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaa 259  Q
    |||||||||||||| |||||||||||||||||                 ||||| ||||||||||| || ||||| |||||||||||| ||||||||||     
T  20758776 ataaaatatgtatgtgctgattaagagagcat-----------------ataattagtttatgagattagaaattaacataatatttatgatgaaaacag 20758694  T
Q  260 ttggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggat 359  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||             ||||||||||||||||||||| |||||| |||    
T  20758693 ttggaaccaataaaggaaccaatgatgtgtgaatttacatataatccaaaattat-----aaaaaagagtgttgttgttatagagttactaaaaaatgat 20758599  T
Q  360 tgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  20758598 tgatacccatattcacatcaaatgaaatcaaacaaagaagtaacatcggtgagtga 20758543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 60 - 314
Target Start/End: Complemental strand, 2196068 - 2195832
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatc 159  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||        | ||| ||||||| | || |||||||||| | |||||||||||||||    
T  2196068 tagttataaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaat-ctttgaaagaagagatgttaaaacgacagaacattgtgattcatc 2195970  T
Q  160 ataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaa 259  Q
    |||||||||||||| |||||||||||||||||                 ||||||||||||||||| ||  ||||||||||||||||||||||||||| |    
T  2195969 ataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttaggatgaaaacta 2195887  T
Q  260 ttggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  2195886 ttggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 2195832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 405
Target Start/End: Original strand, 33706111 - 33706385
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||                 |||    
T  33706111 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcata-----------------taa 33706193  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||    
T  33706194 tcagtttatgagattaggaattgagataatatttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatcca 33706292  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    |||||||             |||||||||||  ||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  33706293 aaattat-----aaaaaagagtgttgttgttgcagagttaccaaaaaatgattgatacccatatttacattagatgaaatcaaacaaagaagtagcat 33706385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 7286586 - 7286348
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||| |  |||||||||  ||||||||        | ||| ||||||| | || |||||||||||| | |||||||||||    
T  7286586 actagttacaaacccgtgcttcgcgcgagttcaataacatattcgataaaaaaaat-ctttgaaagaagagatgttaaaacgacggaatattgtgattca 7286488  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||||||||||||||||||||                 ||||||||||| ||||| ||  |||||||||||||||||||||||||||    
T  7286487 tcataaaatatgtatgagctgattaagagagcat-----------------ataatcagtttgtgagattaggaattgacataatatttaggatgaaaac 7286405  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  7286404 aattggaaccaataaaggaaccaatgatgtgtaaatttacatattatccaaaattat 7286348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 120 - 314
Target Start/End: Original strand, 26320448 - 26320625
Alignment:
Q  120 aaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagttt 219  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||                 ||||||||||||||    
T  26320448 aaagaagatatgttaaaacgacggaacattgtgattcatcataaaatatgtatggcctgattaagagag-----------------catataatcagttt 26320530  T
Q  220 atgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    |||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26320531 atgagattaggaattgacataatatttaggatgaaaactattggaaccaataaagaaatcaatgatgtgtgaatttacatattatccaaaattat 26320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 58 - 413
Target Start/End: Original strand, 10511665 - 10511984
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||||        ||||||||||||| | || ||||||||| || |||||||||||||    
T  10511665 actagttacaaactcgtgcttcacacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagagatgttaaaacgatggaacattgtgattca 10511763  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  10511764 tcataaaatatgtatgggctgat-----------------taagagaacatataatcagtttatgagattagtaattgacataatatttaggatgaaaac 10511846  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||            |||||||||||||||||||||||||||||||||||||||             ||| ||||||| ||| ||||||||||||||    
T  10511847 aattgg------------aaccaatgatgtgtgaatttacatattatccaaaattat------aaaaagagtgatgttgttgtagggttaccaaaaaagg 10511928  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 413  Q
    |||||||| |||| |||| ||||||||||||||||||||||||| | |||||||||    
T  10511929 attgatactcataattacttcaaatgaaatcaagcaaagaagtaacttcggtgagt 10511984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 33610504 - 33610688
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||| ||||||| | || |||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||                 |||||||    
T  33610504 ttctttgaaagaatagatgttaaaacgacggaacattgtgattcgtcataaaatacgtatgagctgattaagagag-----------------catataa 33610586  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33610587 tcagtttatgagattaggaattgacataatatttaagatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaatt 33610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 30690121 - 30690001
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  30690121 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 30690022  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  30690021 ttacatattatccaaaattat 30690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 132 - 425
Target Start/End: Complemental strand, 38935309 - 38935050
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaa 231  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||                 |||||||||||||||||| ||  |    
T  38935309 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagttgattaagagagca-----------------tataatcagtttatgagattatga 38935227  T
Q  232 attgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgt 331  Q
    |||||||||||||||||||||||||| ||||||||||||            ||||||||||||||||||||||||||||||||             ||||    
T  38935226 attgacataatatttaggatgaaaacgattggaaccaat------------gatgtgtgaatttacatattatccaaaattataaaaaaga-----gtgt 38935144  T
Q  332 tgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| | || |||||||||| |||  |||||||| ||| |||||    
T  38935143 tgttgttatagagttaccaaaaaatgattgatacccatattcacatcaaatgaagtaaaacaaagaagtaacatatgtgagtgaatataatcta 38935050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 4882957 - 4882870
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4882957 gtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcattggtgagtga 4882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 415
Target Start/End: Original strand, 3396588 - 3396757
Alignment:
Q  245 ttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatcca---aaattatnnnnnnnnnnnnngtgttgttgttata 341  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||   ||| ||              |||||||||| |||    
T  3396588 ttaggatgaaaacaaatggaaccaatatagaaaccaatgatgtgtgaatttccatattatccatccaaacta----ataaaaaagagtgttgttgtaata 3396683  T
Q  342 gagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  3396684 gagttaccaaaaaatgattgatatccatatttacatcaaatgaaatcaagcaaagaagtagcatagatgagtga 3396757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 314
Target Start/End: Original strand, 12419921 - 12420107
Alignment:
Q  115 cttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatc 214  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||| ||||                 |||||    
T  12419921 cttcgaaagaaaatatgttaaaacgacggaacattttgattcatcataaaatatgtatgggctgatttagagatcata-----------------taatc 12420003  T
Q  215 agtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaa 309  Q
    ||||||||||| ||  |||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||     ||||||||||||||||    
T  12420004 agtttatgagattaggaattgacataatatttaggatgaaaataattggaaccaa-aaaggaaccaatgatatgtgaattatgattacatattatccaaa 12420102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 41781527 - 41781440
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||    
T  41781527 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttaaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 41781440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 294
Target Start/End: Complemental strand, 41781795 - 41781631
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || |||||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||                 ||||    
T  41781795 ttcttcgaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatggactgattaagagagcat-----------------ataa 41781713  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt 294  Q
    ||||||||||||| ||  |||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  41781712 tcagtttatgagattaggaattgacataatatttaggaagaaaataattggaaccaataaaggaaacaatgatgtgtgaatt 41781631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 34726735 - 34726919
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 ||    
T  34726735 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aa 34726817  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
     |||||||||||| || ||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||    
T  34726818 acagtttatgagattagaaattgacataatgtttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatcca 34726916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 33931155 - 33931026
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||        ||||||||||||| | || |||||| ||||| ||||| |||||||    
T  33931155 actagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaaa-ttcttcgaaagaagagatgttaaaatgacggaacattctgattca 33931057  T
Q  158 tcataaaatatgtatgagctgattaagagag 188  Q
    |||||||||||||||| ||||||||||||||    
T  33931056 tcataaaatatgtatgggctgattaagagag 33931026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 415
Target Start/End: Original strand, 12420131 - 12420218
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  12420131 gtgttgtttttgtagagttaccgaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtaacatcagtgagtga 12420218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 33930499 - 33930412
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||| ||| ||||||||    
T  33930499 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttaaaacagatgaaatcaagcaaataagtagaatcagtgagtga 33930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 41691183 - 41691103
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  41691183 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 41691103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 4883112 - 4882978
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||| ||||    
T  4883112 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat-gaaaaaattctttgaaagaagagatgttaaaacgacggaacattgtgcttca 4883014  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    || |||||||||||   |||| ||||||||||||||    
T  4883013 tcgtaaaatatgtaaaggctggttaagagagcatat 4882978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 25696895 - 25697031
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||| ||||||||||||||||                 ||||| ||||| |||||||    
T  25696895 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcctaaaatatgtatgagc-----------------tgatttagagatcatataa 25696977  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaac 266  Q
    ||||||||||||| ||  |||||||||||| |||||||||||||||||||||||    
T  25696978 tcagtttatgagattaggaattgacataatttttaggatgaaaacaattggaac 25697031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 19395695 - 19395576
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||        | |||| |||||| | || |||||||||||| |||||||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggttcaataacgtatttgataaaaaaaat-cttcaaaagaagagatgttaaaacgacggaacattgtgattca 19395597  T
Q  158 tcataaaatatgtatgagctg 178  Q
    |||||||||||||||| ||||    
T  19395596 tcataaaatatgtatgggctg 19395576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 34717497 - 34717417
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||| |||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  34717497 ttcttcaaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 34717417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 270
Target Start/End: Complemental strand, 30142407 - 30142270
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    |||||||||||| || ||||||| || | |||||||||||||||||||||||||||||||||                 |||| ||||| ||||||||||    
T  30142407 ttcgaaagaaaagatgttaaaacaacagaacattgtgattcatcataaaatatgtatgagct-----------------gatttagagatcatataatca 30142325  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 270  Q
    |||||||||| ||  |||||||||||||||||||||||||| ||||| |||||||    
T  30142324 gtttatgagattaggaattgacataatatttaggatgaaaataattgaaaccaat 30142270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 7286328 - 7286275
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7286328 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 7286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 26320645 - 26320698
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26320645 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 26320698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 30689964 - 30689911
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30689964 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 30689911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 33610708 - 33610771
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  33610708 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgaatataatcta 33610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 3149948 - 3150025
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||||||| | || |||||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3149948 ttcgaaagaagagatgttaaaacgaattaacattgtgattcatcataaaatatgtatgggctgattaagagagcatat 3150025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 31295612 - 31295668
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  31295612 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 31295668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 41691107 - 41691051
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||    
T  41691107 catataatcagtttatgagattagaaattgacataatttttagaatgaaaacaattg 41691051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 27066804 - 27066691
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||| |||| ||||| ||| |||||||||        | ||||||||||| | ||  |||||||| || |||||||||||||    
T  27066804 actagttacaaactcgtgcttcacacatgttcagtaacgtattcgataaaaaaaat-cttcgaaagaagagatggtaaaacgatggaacattgtgattca 27066706  T
Q  158 tcataaaatatgtat 172  Q
    |||||||||||||||    
T  27066705 tcataaaatatgtat 27066691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 33931023 - 33930966
Alignment:
Q  215 agtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 272  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||| |||||||||    
T  33931023 agtttatgagattataatttgacataatatttatgatgaaaacaattgaaaccaataa 33930966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 19448873 - 19448813
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||||| |||||| | || |||||||||||| | |||||||||||||||||||||||||||    
T  19448873 ttcttcaaaagaagagatgttaaaacgacggaatattgtgattcatcataaaatatgtatg 19448813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 34717421 - 34717365
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| ||||| |||||||||||||    
T  34717421 catataatcagtttatgagattaggaattgacataatttttagaatgaaaacaattg 34717365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 2195815 - 2195763
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||    
T  2195815 atacccatatt-acatcaaatgaaatcaagcaaacaagtagcatcaatgagtga 2195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 9809821 - 9809862
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  9809821 actagttacaaacccgtgcttcgcacgggttgaataatgtat 9809862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 12702061 - 12702102
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaataatgtat 12702102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 21031039 - 21030927
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatc 159  Q
    |||||| ||||| ||||||| || ||||||||||| |||||||||        | ||| ||||||| | || ||||||| || | |||||||||||||||    
T  21031039 tagttataaacctgtgcttcacataggttcaataacgtattcgataaaaaaaat-cttagaaagaagagatgttaaaacaacagaacattgtgattcatc 21030941  T
Q  160 ataaaatatgtatg 173  Q
    ||||||||||||||    
T  21030940 ataaaatatgtatg 21030927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 30690185 - 30690125
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||| ||||||| | || ||||||||| || |||| ||||||||||||||||||||||||    
T  30690185 ttctttgaaagaagagatgttaaaacgaaggaacatcgtgattcatcataaaatatgtatg 30690125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 31295552 - 31295588
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31295552 actagttacaaacccgtgcttcgcacgggttcaataa 31295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 38935389 - 38935346
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattc 101  Q
    ||||||||||||||||||||||| || |||||||||| ||||||    
T  38935389 actagttacaaacccgtgcttcgtacgggttcaataacgtattc 38935346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 1685048 - 1685090
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||| |||||||    
T  1685048 actagttacaaacccgtgcttcgcacgggttgaattatgtatt 1685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 3086433 - 3086475
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 3086475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 25695539 - 25695581
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 25695581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 34719499 - 34719457
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  34719499 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 34719457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34725257 - 34725295
Alignment:
Q  56 acactagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34725257 acactagttacaaacccgtgcttcgcacgggttaaataa 34725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 7863529 - 7863570
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  7863529 actagttacaaacccgtgcttcgcacgggttgaataacgtat 7863570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 22602635 - 22602676
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  22602635 actagttacaaacccgtgcttcgcacgggttgaataacgtat 22602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 36366125 - 36366166
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  36366125 actagttacaaacccgtgcttcgcacgggttgaataacgtat 36366166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 42819330 - 42819371
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaataacgtat 42819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 5620644 - 5620680
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  5620644 actagttacaaacccgtgcttcgcacgggttgaataa 5620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9702750 - 9702714
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  9702750 actagttacaaacccgtgcttcgcacgggttgaataa 9702714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 14387898 - 14387938
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaataacgtatt 14387938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 58 - 425
Target Start/End: Original strand, 2709 - 3053
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||        ||||||||||||| | ||||||||| ||||| |||||||||||||    
T  2709 actagttacaaacccgtgcttcacacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagagatattaaaatgacggaacattgtgattca 2807  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||| |||||||||||||||||||                 ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2808 tcaaaaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgagaatgcaaattgacataatatttaggatgaaaac 2890  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  2891 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaagg 2985  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  2986 attgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 58 - 425
Target Start/End: Complemental strand, 44600416 - 44600067
Alignment:
Q  58 actagttacaaacccgtgc----ttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtga 153  Q
    ||||||||||||||||| |    ||||||| |||||||||| |||||||||        ||||||||||||| | ||||||||||||||| |||||||||    
T  44600416 actagttacaaacccgtacgaacttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtga 44600317  T
Q  154 ttcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatga 253  Q
    |||||||||||||||||||||| ||||||||||||||                 ||||||||||||||||||||||||||||||||||||| ||||||||    
T  44600316 ttcatcataaaatatgtatgagttgattaagagagca-----------------tataatcagtttatgagaatacaaattgacataatatgtaggatga 44600234  T
Q  254 aaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaa 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||    
T  44600233 aaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaa 44600139  T
Q  354 aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  44600138 aatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 44600067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 58 - 425
Target Start/End: Complemental strand, 38994400 - 38994050
Alignment:
Q  58 actagttacaaacccgtgc----ttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtga 153  Q
    ||||||||||||||||| |    ||||||| |||||||||| |||||||||        ||||||||||||| | ||||||||||||||| |||||||||    
T  38994400 actagttacaaacccgtacgaacttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtga 38994301  T
Q  154 ttcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatga 253  Q
    |||||||||||||||||||||| ||||||||||||||                 ||||||||||||||||||||||||||||||||||||| ||||||||    
T  38994300 ttcatcataaaatatgtatgagttgattaagagagca-----------------tataatcagtttatgagaatacaaattgacataatatgtaggatga 38994218  T
Q  254 aaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||    
T  38994217 aaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatta----ataaaaaagagtgttgttgttatagagttaccaaaa 38994122  T
Q  354 aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  38994121 aatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 38994050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 58 - 411
Target Start/End: Original strand, 22332005 - 22332334
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| ||         | |  ||||||| | || |||||||||||| |||||||||||||    
T  22332005 actagttacagacccgtgcttcgcacgggttcaataacgtattcaataaataaaaattt--gaaagaagagatgttaaaacgacggaacattgtgattca 22332102  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||| | ||||||||||||||                 |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  22332103 tcataaaatatgtacgggctgattaagagag-----------------catataatcagtttatgagattaggaattgacataatatttaggatgaaaac 22332185  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |    
T  22332186 aatttgaaccaataaaggaaccaatgatgtatgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 22332280  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22332281 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 22332334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 19394839 - 19395173
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||        | |||| |||||| | || |||||||||||| |||||||||||||    
T  19394839 actagttacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaat-cttctaaagaagagatgttaaaacgacggaacattgtgattca 19394937  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| || |||||||||||||||                 |||||||||||||||| ||  |||||| ||||||||||||||||||||    
T  19394938 tcataaaatatgtatgggcagattaagagagcata-----------------taatcagtttatgagattaggaattgatataatatttaggatgaaaac 19395020  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||             ||||| |||||||||||||||||||||| |    
T  19395021 aattggaaccaataaaggaaccaatgatgtgtgaatttacattttatccaaaattat-----aaaaaagagtgttattgttatagagttaccaaaaaatg 19395115  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  19395116 attgatgcccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 19395173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 193 - 415
Target Start/End: Original strand, 36597429 - 36597646
Alignment:
Q  193 ttgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa 292  Q
    |||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  36597429 ttgattaagagagcatataatcagtttatgagattaggaattgacataatatttaagatgaaaacaattggaactaataaaggaaccaatgatgtgtgaa 36597528  T
Q  293 tttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagc 392  Q
    ||||||||||||||||||||||             |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36597529 tttacatattatccaaaattat-----aaaaaagagtgttgttgtaatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagc 36597623  T
Q  393 aaagaagtagcatcggtgagtga 415  Q
    |||||||||||||| ||||||||    
T  36597624 aaagaagtagcatcagtgagtga 36597646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 23522055 - 23522271
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  23522055 tgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtttgaat 23522154  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             ||||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||| ||    
T  23522155 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttactaaaaaatgattgatacctatattcacatcaaatgaaatcaaaca 23522249  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    |||||||| ||||  |||||||    
T  23522250 aagaagtaacatcattgagtga 23522271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 113 - 424
Target Start/End: Original strand, 44382127 - 44382420
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||                 |||    
T  44382127 ttcttcgaaagaaaagatattaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcata-----------------taa 44382209  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||    
T  44382210 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 44382308  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  44382309 aaattat-----aaaaaagagtgttgttgttgtagagttaccaaaaaatgattgatacccatatttacataagatgaaatcaagtaaagaagtagcatcg 44382403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 399
Target Start/End: Complemental strand, 7015806 - 7015544
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||                 ||    
T  7015806 ttcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagtgagcatat-----------------aa 7015724  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||| |||||   ||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7015723 tcagtctatgat--taggaattgacataatatttaagatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaatt 7015626  T
Q  313 atnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaag 399  Q
    ||             |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7015625 at-----aaaaaagagtgttgttgttatagagttatcaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaag 7015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 6476888 - 6477104
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||| ||| |||||||||||||||||||| ||  |||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  6476888 tgattaatagagcatataatcagtttatgagattaggaattgacataatatataggataaaaacaattggaaccaataaaggaaccaataatgtgtgaat 6476987  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
     ||||||||||||||||||||             |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |    
T  6476988 atacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaaaaa 6477082  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  6477083 aagaagtagcatcggtgagtga 6477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 206 - 415
Target Start/End: Complemental strand, 41157183 - 41156971
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacata 300  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||     ||||||    
T  41157183 catataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaaaaaaggaaccaatgatgtgtgaattatgattacata 41157084  T
Q  301 ttatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagt 400  Q
    ||||||||||||||              |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  41157083 ttatccaaaattataaaaaagagtgt--tgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagt 41156986  T
Q  401 agcatcggtgagtga 415  Q
    |||||||||||||||    
T  41156985 agcatcggtgagtga 41156971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 42785856 - 42785618
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||        || || ||||||| |||| |||||||||||| |||||||||||||    
T  42785856 actagttacaaacccgtgtttcgcacgggttcaataatgtattcgataaaaaaa-ttatttgaaagaagatatgttaaaacgacggaacattgtgattca 42785758  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  42785757 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgaaattaagaattgacataatatttaggatgaaaac 42785675  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42785674 aattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 42785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 117 - 415
Target Start/End: Complemental strand, 41629529 - 41629265
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcag 216  Q
    ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||                 ||||||||    
T  41629529 tcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcat-----------------ataatcag 41629447  T
Q  217 tttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnn 316  Q
    ||||||||| ||  |||||||| |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||      
T  41629446 tttatgagactaggaattgacaaaatatttaggatgaaaacaattggaaccaat------------gatgtgtgaatttacatattatccaaaattataa 41629359  T
Q  317 nnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
               |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41629358 aaaaga-----gtgttgttgttatagagttaccaaaaaatgattgataatcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 41629265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 38962773 - 38962545
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa------------gaaaccaa 281  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||            | ||||||    
T  38962773 tgattaagagagcatataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattggaaccaataaatgaaccaataaaggaaccaa 38962674  T
Q  282 tgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaa 381  Q
    |||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  38962673 tgatgtgtgaatttacatattatccaaaattataaaaaaga-----gtgttgttgttatagagttaccaaaaaatgattgatatccatatttacatcaaa 38962579  T
Q  382 tgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    | ||||||||||||||||||||||| ||||||||    
T  38962578 taaaatcaagcaaagaagtagcatcagtgagtga 38962545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 27273919 - 27273681
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  27273919 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 27273821  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||| ||||||| |||| |||||||||||||||||                 ||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  27273820 tcaaaaaatatatatgggctgattaagagagcat-----------------ataatcagtttatgagattatgaattgacataatatttatgatgaaaac 27273738  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  27273737 aattggaaccaataaatgaaccaatgatgtgtgaatttacatattatccaaaattat 27273681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 3751700 - 3751490
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| |||||  ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3751700 tgatttagagattatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaat 3751602  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |     |||||||||||||||             || |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  3751601 t-----attatccaaaattataaaaaaga-----gttttgttgttgtagagttaccaaaaaaggattgatactcatatttacatcagatgaaatcaagca 3751512  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  3751511 aagaagtagcatcggtgagtga 3751490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 14078130 - 14078368
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||        || || ||||||| | || |||||||||||| |||||||||||||    
T  14078130 actagttacaaacccgtgcttcgctgaggttcaataacgtattcgataattatttttttt-gaaagaagagatgttaaaacgacggaacattgtgattca 14078228  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| ||||||| |||||||||||| ||  |||||||||||||||||||||||||||    
T  14078229 tcataaaatatgtatgggctgat-----------------taagagagcatataaccagtttatgagattaggaattgacataatatttaggatgaaaac 14078311  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  14078312 aattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 14078368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 33423613 - 33423797
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||| ||||||| | || |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||                 |||||||    
T  33423613 ttctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggactgattaagagag-----------------catataa 33423695  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  33423696 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaatt 33423795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 9761837 - 9761717
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  9761837 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 9761738  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  9761737 ttacatattatccaaaattat 9761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 218 - 425
Target Start/End: Original strand, 42810359 - 42810554
Alignment:
Q  218 ttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnn 317  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||      |||||||||||       
T  42810359 ttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaaggaatcaatgatgtgtgaatttac------tccaaaattataaa 42810452  T
Q  318 nnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagt 417  Q
              |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  42810453 aaaga-----gtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatg-aatcaagcaaagaagtagcatcggtgagtgagg 42810546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 19248784 - 19248491
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||| ||| | || |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||                 ||    
T  19248784 ttcttcgaaggaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtacgagctgatgaagagagcatat-----------------aa 19248702  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||     ||||| ||||||||    
T  19248701 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgagaattataattacacattatcca 19248603  T
Q  308 aaattat---nnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagga-ttgatacccatatttacatcaaatgaaatcaagcaaagaagtagc 403  Q
    |||||||                |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||    
T  19248602 aaattataaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgatttgatacccatatttacatcagatgaaatcaagaaaagaagtagc 19248503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 19321968 - 19321675
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||| ||| | || |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||                 ||    
T  19321968 ttcttcgaaggaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtacgagctgatgaagagagcatat-----------------aa 19321886  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||     ||||| ||||||||    
T  19321885 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgagaattataattacacattatcca 19321787  T
Q  308 aaattat---nnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagga-ttgatacccatatttacatcaaatgaaatcaagcaaagaagtagc 403  Q
    |||||||                |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||    
T  19321786 aaattataaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgatttgatacccatatttacatcagatgaaatcaagaaaagaagtagc 19321687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 215 - 415
Target Start/End: Original strand, 22946211 - 22946411
Alignment:
Q  215 agtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaa 309  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||     |||||||||| ||||    
T  22946211 agtttatgagattagaatttgacataatatttatgatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattattcaaa 22946310  T
Q  310 attatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggt 409  Q
    |||||               ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||    
T  22946311 attataaaaaagaac-----gttgttgttatagagttaccaaaaaaggattgatacccatatttaaaacaaatgaaatcaagcaaataagtagcatcagt 22946405  T
Q  410 gagtga 415  Q
    ||||||    
T  22946406 gagtga 22946411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 414
Target Start/End: Complemental strand, 41978161 - 41977876
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| || |||||||||||||||||||||||||| ||||||| ||||| |||||                 ||    
T  41978161 ttcttcgaaagaaaagatgttaaaacgacggaacgttgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aa 41978079  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||| | ||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |     |||||||||| ||    
T  41978078 tcagtttatgaaattaggaatggacataatatttaggatgaaaacaattggaaccaa-aaagaaaccaatgatgtgtgaagtatgattacatattattca 41977980  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    || ||||              |||||||||| |||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||    
T  41977979 aa-ttataaaaaatagtgt--tgttgttgttgtagagttaccaaaaaaggattgatactcatatttacataaggtgaaatcaagcaaagaagtagcatcg 41977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 5836281 - 5836045
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||        | ||| ||||||| | || ||||||||| || |||||||||||||    
T  5836281 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaaat-ctttgaaagaagagatgttaaaacgatggaacattgtgattca 5836183  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||||||                   ||||||||||||| |||||| ||  ||||||||||||||||| ||  |||||    
T  5836182 tcataaaatatgtatgggctgattaagag-------------------catataatcagttaatgagattaggaattgacataatatttatgaaaaaaac 5836102  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  5836101 aattggaaccaataaaagaactaatgatgtgtgaatttacatattatccaaaattat 5836045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 413
Target Start/End: Original strand, 41533186 - 41533468
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| ||                 ||||| ||||| |||||||    
T  41533186 ttcttcgaaagaaaagatgttaaaacgacaggacattgtgattcatcataaaatatgtatgggc-----------------tgatttagagatcatataa 41533268  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||| ||||||||| ||  |||||||||||||||||||| |||| |||||||||| || |||| ||||||| ||||||||||     || |||||||||||    
T  41533269 tcaatttatgagattaggaattgacataatatttaggaagaaagcaattggaacgaa-aaaggaaccaataatgtgtgaattatgattgcatattatcca 41533367  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||| | || ||||||| |||||    
T  41533368 aaattat-----aaaaaagagtgttgttgttgtagagttaccaaaaaacgattgatatccatatttacatcagatgaaatctaacatagaagtaacatcg 41533462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 30827077 - 30826840
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||           |  ||||||| | || |||||||||||  |||||||||||||    
T  30827077 actagttacaaacccgtgcttcgtacgggttcaataacgtattcgataaaaaaaaaatt--gaaagaagagatgttaaaacgacgaaacattgtgattca 30826980  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||| |||||  || ||  |||||||||||||||||||||||||||    
T  30826979 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcaatttatacgattaggaattgacataatatttaggatgaaaac 30826897  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  30826896 tattggaaccaacaaaggaatcaatgatgtgtgaatttacatattatccaaaattat 30826840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 38993020 - 38992889
Alignment:
Q  280 aatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatca 379  Q
    ||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38993020 aatgatgtgtgaatttacatattatccaaaatta----ataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatatccatatttacatca 38992925  T
Q  380 aatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  38992924 aataaaatcaagcaaagaagtagcatcagtgagtga 38992889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 4465823 - 4466007
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 ||    
T  4465823 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aa 4465905  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||| ||||||||| ||  |||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||     ||||||||||||||    
T  4465906 tcaatttatgagattatgaattgacataatgtttaggatgaaaacaattggaaccaa-aaaggaaccaataatgtgtgaattatgattacatattatcca 4466004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 45291817 - 45292005
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||                 |||||||    
T  45291817 ttcttcgaaagaagatacgttaaaacgacggaacattgtgattcatcataaaatatgtacgggctgattaagagag-----------------catataa 45291899  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    | ||||||||||| ||  |||||||||||||||||||||||||||||||   ||||| |||| ||||||||||||| ||||     ||||| ||||||||    
T  45291900 taagtttatgagattaggaattgacataatatttaggatgaaaacaattatcaccaa-aaaggaaccaatgatgtgagaattatgattacacattatcca 45291998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 45293110 - 45293182
Alignment:
Q  343 agttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  45293110 agttaccaaaaaatgattgatatccatatttacatcatatgaaatcaagaaaagaagtagcatcggtgagtga 45293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 25345123 - 25345015
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacata 300  Q
    ||||||||| |||||||||| ||  |||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||    
T  25345123 catataatctgtttatgagattaggaattaacataatgtttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacata 25345025  T
Q  301 ttatccaaaa 310  Q
    ||||||||||    
T  25345024 ttatccaaaa 25345015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 12760884 - 12760804
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||| |||||    
T  12760884 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtataggctgatttagagatcatat 12760804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 25620133 - 25620213
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  25620133 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcttaaaatatgtatgagctgatttagagatcatat 25620213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 7389887 - 7389704
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||                 ||||| ||||| ||| |||    
T  7389887 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggc-----------------tgatttagagatcatttaa 7389805  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||| ||||||| |||||||||||||||||| || |  | |||||||||||||||     ||||||||||||||    
T  7389804 tcagtttatgagattaggaattgacataatgtttaggaggaaaacaattggaaccaaaaagg--atcaatgatgtgtgaattatgattacatattatcca 7389707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 36597312 - 36597446
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||| |  |||| |||        | ||| ||||||| | || |||||||||||| |||||||||| ||    
T  36597312 actagttacaaacccgtgcttcgcacgggttcaatgacatatttgataaaaaaaat-ctttgaaagaagagatgttaaaacgacggaacattgtgatgca 36597410  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||||||||||||| | |||||||||||||||||    
T  36597411 tcataaaatatgtatgggttgattaagagagcatat 36597446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 23521997 - 23522071
Alignment:
Q  119 gaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||| | || |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23521997 gaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatgtgctgattaagagagcatat 23522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 9761697 - 9761644
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9761697 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 9761644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 33423817 - 33423870
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33423817 atacccatatttacatcaaatgaaatcaagcaaagaaatagcatcggtgagtga 33423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 42785598 - 42785545
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42785598 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 42785545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 22946152 - 22946208
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagag 188  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  22946152 ttaaaacgacggaacattgtgattcatcataaaatatatatgagctgattaagagag 22946208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 269
Target Start/End: Original strand, 25615859 - 25615998
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| | |  ||||||||||||||||||||||||||||||||||||| ||||| ||||                 |||    
T  25615859 ttcttcgaaagaaaagatgttaaaacaatgaaacattgtgattcatcataaaatatgtatgagctgatttagagatcata-----------------taa 25615941  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaa 269  Q
    ||||||||||||| ||  |||||||||||| |||||||||| |||||||||||||||    
T  25615942 tcagtttatgagattaggaattgacataatgtttaggatgataacaattggaaccaa 25615998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 5836025 - 5835972
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  5836025 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 5835972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 44940559 - 44940445
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| || || |||           |||||||||| |||| |||||||||||| ||||| |||||||    
T  44940559 actagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaaa-ttcgaaagaagatatgttaaaacgacggaacattatgattca 44940461  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  44940460 tcataaaatatgtatg 44940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 42060723 - 42060785
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctga 179  Q
    ||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  42060723 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctga 42060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 6300489 - 6300601
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| || || |||         ||   ||||||| |||| |||||||||||| ||||| |||||||    
T  6300489 actagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaatc---gaaagaagatatgttaaaacgacggaacattatgattca 6300585  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  6300586 tcataaaatatgtatg 6300601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 25620209 - 25620317
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacata 300  Q
    |||||||||||||||||||| |   |||||  ||||| ||||||||||||||||||||||  || |||| ||||||||||||||||||     |||||||    
T  25620209 catataatcagtttatgagattgggaattggaataatgtttaggatgaaaacaattggaa-taaaaaaggaaccaatgatgtgtgaattatgattacata 25620307  T
Q  301 ttatccaaaa 310  Q
    ||||||||||    
T  25620308 ttatccaaaa 25620317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 27273661 - 27273608
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27273661 atactcatatttacatcaaatgaaatcaaggaaagaagtagcatcagtgagtga 27273608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 415
Target Start/End: Complemental strand, 30826818 - 30826770
Alignment:
Q  367 catatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30826818 catatttacatctaatgaaatcaagcaaagaagtagcatcagtgagtga 30826770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 37029956 - 37029836
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| || || |||            ||||||||| |||| |||||||||||| ||||| |||||||    
T  37029956 actagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaacaaaaaaaatcgaaagaagatatgttaaaacgacggaacattatgattca 37029857  T
Q  158 tcataaaatatgtatgagctg 178  Q
    ||||||||||| |||| ||||    
T  37029856 tcataaaatatatatgggctg 37029836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 413
Target Start/End: Original strand, 14078392 - 14078439
Alignment:
Q  366 ccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 413  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  14078392 ccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagt 14078439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 41157229 - 41157180
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcata 162  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  41157229 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcata 41157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 12760808 - 12760752
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    ||||||||| |||||||||| ||  |||||||||||||| |||||||||||||||||    
T  12760808 catataatctgtttatgagattaggaattgacataatatataggatgaaaacaattg 12760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23966381 - 23966419
Alignment:
Q  56 acactagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  23966381 acactagttacaaacccgtgcttcgcacgggttcaataa 23966419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 24055882 - 24055840
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  24055882 actagttacaaacccgtgcttcgcacaggttgaataacgtatt 24055840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 9761901 - 9761841
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||| ||||||| | || ||| |||||||  |||||||||||||||||||||||||||||    
T  9761901 ttctttgaaagaagagatgttagaacgacgaaacattgtgattcatcataaaatatgtatg 9761841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 23966448 - 23966504
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| | |||| ||||||||||||||||    
T  23966448 tcgaaagaagatatgttaaaacgacggaacattataattcttcataaaatatgtatg 23966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 42060662 - 42060698
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  42060662 actagttacaaacccgtgcttcgcacgggttcaataa 42060698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 25345194 - 25345139
Alignment:
Q  118 cgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||||||||| || ||||||  |||| |||||||| ||||||||||||||||||||    
T  25345194 cgaaagaaaagatgttaaaaaaacggaacattgtggttcatcataaaatatgtatg 25345139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 40586442 - 40586485
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||    
T  40586442 cactagttacaaacccgtgcttcgcacgggttgaataacgtatt 40586485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 18375558 - 18375600
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  18375558 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 18375600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 36778521 - 36778479
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  36778521 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 36778479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 41158685 - 41158643
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  41158685 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 41158643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 2961009 - 2961050
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  2961009 actagttacaaacccgtgcttcgcacgggttgaataacgtat 2961050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 27272727 - 27272686
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  27272727 actagttacaaacccgtgcttcgcacgggttgaataacgtat 27272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 41908051 - 41908014
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataat 95  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  41908051 actagttacaaacccgtgcttcgcacgggttgaataat 41908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 3751745 - 3751705
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtat 172  Q
    ||||||| |||| |||||||||||||||| |||||||||||    
T  3751745 ttaaaacaacggaacattgtgattcatcaaaaaatatgtat 3751705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 7391363 - 7391327
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  7391363 actagttacaaacccgtgcttcgcacgggttgaataa 7391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 12249912 - 12249948
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  12249912 actagttacaaacccgtgcttcgcacgggttgaataa 12249948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 23626056 - 23626092
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  23626056 actagttacaaacccgtgcttcgcacgggttgaataa 23626092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 38962818 - 38962782
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatat 168  Q
    |||||||||||| | ||||||||||||||||||||||    
T  38962818 ttaaaacgacggaatattgtgattcatcataaaatat 38962782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 39204906 - 39204870
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  39204906 actagttacaaacccgtgctttgcacaggttgaataa 39204870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 39445295 - 39445259
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  39445295 actagttacaaacccgtgcttcgcacgggttgaataa 39445259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 28974051 - 28973714
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnt-tcttcgaaagaaaatatattaaaacgacgggacattgtgattc 156  Q
    |||||||||||||||||||||||||| ||||||||||  |||| |||          |||||||||||| | ||||||||| ||| | ||||||||||||    
T  28974051 actagttacaaacccgtgcttcgcacgggttcaataacatatttgataaaaaaaaaatcttcgaaagaagagatattaaaatgacagaacattgtgattc 28973952  T
Q  157 atcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaa 256  Q
    |||||||||||||||||||||||||||||||||||                 ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28973951 atcataaaatatgtatgagctgattaagagagcat-----------------ataatcagtttatgataatacaaattgacataatatttaggatgaaaa 28973869  T
Q  257 caattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaag 356  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||             |||||||||||||||||||||| ||||||    
T  28973868 caattggaaccaataaagaaaccaatgatgtgtgagtttacatattatccaaaattat----aaaaaaagagtgttgttgttatagagttaccgaaaaag 28973773  T
Q  357 gattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  28973772 gattgatacccatatttacatcaaaagaaatcaagtaaagaagtagcatcggtgagtga 28973714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 53343395 - 53343062
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||| |||||| |||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  53343395 actagttataaacctgtgctttgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 53343297  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  53343296 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaaac 53343214  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |    
T  53343213 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat------aaaaagagtgttgttgttatagagttaccaaaaaatg 53343120  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53343119 attgatacacatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 53343062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 19830700 - 19831035
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||||        ||||||||||||  | || |||||||||||| |||||||||||||    
T  19830700 actagttacatacccgtgcttcgcatgggttcaataacgtattcgataaaaaaaattcttcgaaagatgagatgttaaaacgacggaacattgtgattca 19830799  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||| |||||||||                 ||||||||||||||| ||   ||| ||||||| | ||||||||||||    
T  19830800 tcataaaatatgtatgggctgattaatagagcatat-----------------aatcagtttatgagattaggtattaacataatgtataggatgaaaac 19830882  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||| |    
T  19830883 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagaa-----tgttgttgttatagagttaccaaaaaatg 19830977  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830978 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 19831035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 2777263 - 2776929
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  2777263 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 2777165  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||| ||||||||||| || ||||| ||||||||||||||||||||||    
T  2777164 tcataaaatatgtatgtgctgattaagagagcat-----------------ataattagtttatgagattagaaattaacataatatttaggatgaaaac 2777082  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||             ||||||||||||||||||||| |||||| |    
T  2777081 aattggaaccaataaaggaaccaatgatatgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttactaaaaaatg 2776987  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||    
T  2776986 attgatacccatattcacatcaaatgaaatcaaacaaagaaataacatcggtgagtga 2776929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 38009249 - 38008913
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||||        | ||||||||||| | || |||||||||||| |||||||||||||    
T  38009249 actagttacaaacacgtgcttcacacgggttcaataacgtattcgataaaaaaaat-cttcgaaagaagagatgttaaaacgacggaacattgtgattca 38009151  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||| ||||||||                 ||||| ||||||| | ||  |||||||||||||||||||||||||||    
T  38009150 tcataaaatatgtatgggctgattaagggagcatat-----------------aatcaatttatgatattaggaattgacataatatttaggatgaaaac 38009068  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||             |||||||||||||||||||||||||||| |    
T  38009067 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatgcaaaataat---aaaaaaaaaagtgttgttgttatagagttaccaaaaaatg 38008971  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008970 attgatacacatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 38008913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 114 - 415
Target Start/End: Original strand, 55998071 - 55998350
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||| ||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||                 ||||    
T  55998071 tctttgaaagaagagatattaaaacgaaggaacattgtgattcatcataaaatatgtatgagctgtttaagagagcata-----------------taat 55998153  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatta 313  Q
    |||||||||| | ||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55998154 cagtttatgatattaggaattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaatta 55998253  T
Q  314 tnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 413  Q
    |             |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55998254 t-----aaaaaagagtgttgttgttatagagttaccaaaaaatgtttgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 55998348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 196 - 415
Target Start/End: Original strand, 33502425 - 33502639
Alignment:
Q  196 attaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaattt 295  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33502425 attaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaaaaaccaatgatgtgtgaattt 33502524  T
Q  296 acatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaa 395  Q
    |||||||||||||||||||             |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  33502525 acatattatccaaaattat-----aaaaaagagtgttgttgttatagagttatcaaaaaatgattgatatccatatttacatcaaatgaaatcaagcaaa 33502619  T
Q  396 gaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||    
T  33502620 gaagtagcatcggtgagtga 33502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 22115354 - 22115689
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||        ||||  ||||||| | || |||||||||| | |||||||||||||    
T  22115354 actagttacaaacccgtgcttcccacggattcaataacgtattcgataaaaaaaattctctgaaagaagagatgttaaaacgacagaacattgtgattca 22115453  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  22115454 tcataaaatatgtatgtgctgat-----------------taagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaac 22115536  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             |||||| |||||||||||||| |||||| |    
T  22115537 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttggtgttatagagttactaaaaaatg 22115631  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||    
T  22115632 attgatacccatattcacatcaaatgaaatcaaacaaagaagtaacatcggagagtga 22115689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 35495024 - 35495239
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||| ||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  35495024 tgattaagagagcatataattagtttatgagattaggaattgacataatatt-aggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 35495122  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35495123 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagca 35495217  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  35495218 aagaagtagcatcggtgagtga 35495239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 114 - 415
Target Start/End: Complemental strand, 17700107 - 17699828
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||||||||||| | || |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||                 |||||    
T  17700107 tcttcgaaagaatagatgttaaaacgacggaacattatgattcatcataaaatatgtatgagctgattaagagagcat-----------------ataat 17700025  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatta 313  Q
     ||||||||||| ||  ||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  17700024 aagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccagtaaaggaaccaataatgtgtgaatttacatattatccaaaatta 17699925  T
Q  314 tnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 413  Q
    |             |||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17699924 t-----aaaaaagagtgacgttgttatagagttaccaaaaaatgattgatgcccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagt 17699830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 37700901 - 37701235
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| ||||||   |||| |||||||||| |||||||||        || |||||||||| | || ||||||||| || ||||||| |||||    
T  37700901 actagttacaaatccgtgcgaagcacgggttcaataacgtattcgataaaaaaaattattcgaaagaagagatgttaaaacgatggaacattgtaattca 37701000  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||| | ||   ||||||||||||| ||||||||||||    
T  37701001 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgaaattaggtattgacataatatataggatgaaaac 37701083  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||             |||||||||||||||||||||||||||| |    
T  37701084 aattgaaaccaataaagaa-ccaatgatgtgtgaatttatatattatccaaaattatagaaaata-----gtgttgttgttatagagttaccaaaaaatg 37701177  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37701178 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 37701235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 41983532 - 41983871
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||  |||||||| ||||    
T  41983532 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaat-ttctttgaaagaagagatgttaaaacgacgaaacattgtgcttca 41983630  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||| ||||                 ||||||||||||||| ||  |||||| ||||||||||||||| ||||    
T  41983631 tcataaaatatgtatgggctgattaagagagaatat-----------------aatcagtttatgagattatgaattgaaataatatttaggatggaaac 41983713  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| |||||||||||||||||||     ||||||||||||||||||||             |||||||||||||||||||||||||    
T  41983714 aattggaaccaataaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaaga-----gtgttgttgttatagagttaccaaa 41983808  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41983809 aaagaattgatatccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 41983871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 39742353 - 39742632
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||| ||||||||| || |||||||||| | ||||||||||||||||||||||||||||| ||||||                 ||||||| |||||||    
T  39742353 ttctttgaaagaaaagatgttaaaacgacagaacattgtgattcatcataaaatatgtatgggctgat-----------------taagagagcatataa 39742435  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| ||  ||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  39742436 tcagtttatgagattaggaattgacataatatttatgatgaaaacaattggaatcaataaatgaaccaatgatgtgtgaatttacatattatccaaaatt 39742535  T
Q  313 atnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 412  Q
    ||             |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  39742536 at-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacat-aaatgaaatcaagcaaagaagtagcatcagtgag 39742629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 36514762 - 36514978
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36514762 tgattaagagaacatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtctgaat 36514861  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||| ||||||||||||             ||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||| ||    
T  36514862 ttacatataatccaaaattat-----aaaaaagagtgttgttgttatagagttactaaaaaatgattgatactcatattcacatcaaatgaaatcaaaca 36514956  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    |||||||| |||||||||||||    
T  36514957 aagaagtaacatcggtgagtga 36514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 17740977 - 17740693
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |                 |||||| ||||| |||||||    
T  17740977 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggg-----------------ttgatttagagatcatataa 17740895  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||    
T  17740894 tcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 17740796  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17740795 aaattat-----aaaaaagagtgttgttgttgtagagttgccaaaaaagaattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatcg 17740701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 58 - 396
Target Start/End: Complemental strand, 21354005 - 21353690
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||           || ||||||| | || |||||||||||  |||||||||||||    
T  21354005 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaaaatt-gaaagaagagatgttaaaacgacgaaacattgtgattca 21353907  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  21353906 tcataaaatatgtatgtgctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaaac 21353824  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||| |||||| |    
T  21353823 aattggaaccaataaaagaaccaatgatgtgttaatttacatattatccaaaattat-----aaaaaaaagtgttgttgttatagagttactaaaaaatg 21353729  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaag 396  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  21353728 attgatacccatattcacatcaaatgaaatcaaacaaag 21353690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 133 - 407
Target Start/End: Original strand, 19109135 - 19109387
Alignment:
Q  133 taaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaa 232  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||                 ||||||| || ||||||| | ||  ||    
T  19109135 taaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagag-----------------catataaacaatttatgaaattaggaa 19109217  T
Q  233 ttgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgtt 332  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |             |||||    
T  19109218 ttgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattgt-----aaaaaagagtgtt 19109312  T
Q  333 gttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19109313 gttgttatagagttaacaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatcg 19109387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 13628922 - 13628707
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||| | |||||||||| ||||||||| ||  ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||    
T  13628922 tgattaagatagcatataatcaatttatgagattaggaattgacataatatttaggat-aaaacaattagaaccaataaaggaaccaatgatgtttgaat 13628824  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||              |||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  13628823 ttacatattatccaaaattataaaaaagat-----tgttgttgatatagagttaccaaaaaatgattgctacccatatttacgtcaaatgaaatcaagca 13628729  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  13628728 aagaagtagcatcggtgagtga 13628707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 411
Target Start/End: Original strand, 47556780 - 47557060
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| |||||                 ||    
T  47556780 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgaactgatttagagatcatat-----------------aa 47556862  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||||| ||  |||||| ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||     |||||||||||||    
T  47556863 tcagtttatgagattaggaattgagataatatttaggatgaaaacaattggaacaaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 47556961  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  47556962 aaattataaaaaaga-----gtgttgttgttgcagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcatcg 47557056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 23479865 - 23479626
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||            | ||||||| | || |||||||||||| |||||||||||||    
T  23479865 actagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaaaaaattgaaagaagagatgttaaaacgacggaacattgtgattca 23479766  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||| ||| ||  |||||||||||||||||||||||||||    
T  23479765 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttataagattaggaattgacataatatttaggatgaaaac 23479683  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23479682 tattggaaccaataaagaaatcaatgatgtgtgaatttacatattatccaaaattat 23479626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 58 - 426
Target Start/End: Complemental strand, 36858043 - 36857709
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||        ||||||||||||| | |  ||||||| |||| ||||||||||| |    
T  36858043 actagttacaaatccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagaaacgttaaaacaacggaacattgtgattta 36857945  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||  |||||||||||||||                |||||||||| ||||||||| ||  |||||||||||||||||||||||||||    
T  36857944 tcataaaatatgtataggctgattaagagagc----------------catataatcaatttatgagattaggaattgacataatatttaggatgaaaac 36857861  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||            ||||||||||||||||||||||||||||||||             |||||||||| || ||||| || ||||| |    
T  36857860 aattggaaccaat------------gatgtgtgaatttacatattatccaaaattataaaaaaga-----gtgttgttgtaattgagttgccgaaaaatg 36857778  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatctac 426  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| || ||||||    
T  36857777 attgatactcatatttacatcaaatgaaatcaagcaaagaagtagcattagtgagtgaggataatctac 36857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 5271602 - 5271840
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| ||||||  |||||    
T  5271602 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgaaattca 5271700  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||  |||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  5271701 tcataaaatatgtatggactgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 5271783  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  5271784 tattggaaccaataaatgaatcaatgatgtgtgaatttacatattatccaaaattat 5271840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 34055891 - 34056128
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||           || ||||||| | || |||||||||||| |||||||||||||    
T  34055891 actagttacaaacccgtg-ttcgcacgggttcaataacgtattcgataaaaaaaaaattt-gaaagaagagatgttaaaacgacggaacattgtgattca 34055988  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||                 ||||||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||    
T  34055989 tcataaaatatgtatgagctgat-----------------taagagaacatataatcagtttatgagattaggaattgatataatatttaggatgaaaac 34056071  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  34056072 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 34056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 116 - 415
Target Start/End: Original strand, 7643166 - 7643430
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    |||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||                  |||| ||||||||||    
T  7643166 ttcgaaagaagatatgttaaaacgacggaacattgtaattcatcataaaatatgtatgagcttatta------------------gagagcatataatca 7643247  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatn 315  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |||||||||            ||||||| ||||||||||||| |||||||| |     
T  7643248 gtttatgagattagaaattgacataatatttaggatgaaaacaatcggaaccaat------------gatgtgtaaatttacatattaaccaaaattgta 7643335  T
Q  316 nnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
                |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  7643336 aaaaaga-----gtgttgttgttatagagttaccaaaaaatgattgatacacatatttacataaaatgaaatcaagcaaaaaagtagcatcggtgagtga 7643430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 14828956 - 14829074
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  14828956 tgattaagagagcatataatcagtttatgagattatgaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 14829055  T
Q  294 ttacatattatccaaaatt 312  Q
    |||||||||||||||||||    
T  14829056 ttacatattatccaaaatt 14829074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 211 - 415
Target Start/End: Complemental strand, 40623003 - 40622803
Alignment:
Q  211 aatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatc 305  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||     |||||||||||    
T  40623003 aatcagtttatgagattaagaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaactaataatgtgtgaattatgattacatattatc 40622905  T
Q  306 caaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    |||||  |              ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  40622904 caaaaaaa--------aaaagagtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacattagatgaaatcaagcaaagaagtagcat 40622813  T
Q  406 cggtgagtga 415  Q
    ||||||||||    
T  40622812 cggtgagtga 40622803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 58 - 270
Target Start/End: Original strand, 54331070 - 54331264
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  54331070 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 54331168  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  54331169 tcataaaatatgtatgggctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 54331251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 8531554 - 8531470
Alignment:
Q  331 ttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  8531554 ttgttgttgtagagttatcaaaaaaggattgatacacatatttacatcagatgaaatcaagcaaaaaagtagcatcggtgagtga 8531470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 2116764 - 2116579
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 ||    
T  2116764 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aa 2116682  T
Q  213 tcagtttatgagaatacaaattgacat-aatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcc 306  Q
    ||||||||||||| ||  ||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||    
T  2116681 tcagtttatgagattatgaattgacataaatgtttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcc 2116583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 7847763 - 7847676
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||| |||||||||||||| ||||||||    
T  7847763 gtgttgttgttatagagttaccaagaaaggattgatacccatatttaaaacaattgaaatcaagtaaagaagtagcatcagtgagtga 7847676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 15642363 - 15642497
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||| ||||| |||||||| |||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| ||||| |||||||    
T  15642363 actagtcacaaatccgtgctttgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattatgattca 15642461  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||||||||||||| |||||||||||||||||||    
T  15642462 tcataaaatatgtatgggctgattaagagagcatat 15642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 39714899 - 39714979
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  39714899 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 39714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 52800932 - 52800852
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  52800932 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 52800852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 12682157 - 12682340
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || || |||| |||| |||||||||||||||||||||||||||||||                 |||||| ||||| ||| |||    
T  12682157 ttcttcgaaagaaaagatgtttaaacaacggaacattgtgattcatcataaaatatgtatgag-----------------ttgatttagagatcatttaa 12682239  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||| || |  | |||||||||||||||     ||||||||||||||    
T  12682240 tcagtttatgagattaggaattgacataatgtttaggatgaaaacaattggaaccaaaaagg--atcaatgatgtgtgaattatgattacatattatcca 12682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 46104837 - 46104653
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||| |||||||||||||| ||||||| |||||          |||       |||||    
T  46104837 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcattataaaatatgtatgggctgatttagaga----------taa-------tataa 46104755  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||| ||||||||||||| |||| ||| ||| |||| ||||||||||||||||||     ||||||||||||||    
T  46104754 tcagtttatgagattaggaattgacataatgtttaggatgaaaataatt-gaaacaaaaaaggaaccaatgatgtgtgaattatgattacatattatcca 46104656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 14828911 - 14828972
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14828911 ttaaaacgatggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatat 14828972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 35494909 - 35495040
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||         |  ||||||| |||||| |||||||||||| |||||||||||||    
T  35494909 actagttacaaacccgtgcttcacacggattcaataacgtattcgataaaaaaaaat--tcgaaagtaaatatgttaaaacgacggaacattgtgattca 35495006  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||| ||||||  |||| |||||||||||||||||||    
T  35495007 tcagaaaata--tatgggctgattaagagagcatat 35495040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 33502363 - 33502439
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||| | || |||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  33502363 tcgaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctaattaagagagcatat 33502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 28134708 - 28134830
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||  ||||||||||| |||||||||| |||||||||         ||   ||||||| | || |||||||||||| |||||||||||||    
T  28134708 actagttacaaacttgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatc---gaaagaagagatgttaaaacgacggaacattgtgattca 28134804  T
Q  158 tcataaaatatgtatgagctgattaa 183  Q
    |||||||||||||||| |||||||||    
T  28134805 tcataaaatatgtatgggctgattaa 28134830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 36514665 - 36514772
Alignment:
Q  80 gcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctga 179  Q
    |||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  36514665 gcacgggttcaataacgtattcgataaaaaaaattctttgaaagaagagatgttaaaacgacggaatattgtgattcatcataaaatatgtatgtgctga 36514764  T
Q  180 ttaagaga 187  Q
    ||||||||    
T  36514765 ttaagaga 36514772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 40623082 - 40623018
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagct 177  Q
    ||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||| |||    
T  40623082 ttcttcgaaagaaaagatgttaaaacgacagaacattgtgattcatcataaaatatgtatgggct 40623018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 5271860 - 5271913
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  5271860 atacccatatttacatcaaatgaaatcaaacaaagaagtagcattagtgagtga 5271913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 14829096 - 14829149
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  14829096 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcactgagtga 14829149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 23479605 - 23479552
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23479605 atactcatatttacatcaaatgaaatcaagcaaagacgtagcatcagtgagtga 23479552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 740365 - 740421
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  740365 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 740421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 15642493 - 15642549
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||    
T  15642493 catataatcagtttatgagattaggaattgacataatatttaagatgaaaacaattg 15642549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 39714975 - 39715031
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  39714975 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 39715031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 405
Target Start/End: Original strand, 34056148 - 34056191
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  34056148 atacccatatttacatcaaatgaaatcaagcaaataagtagcat 34056191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 14828803 - 14828849
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgat 104  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 14828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 15521050 - 15520989
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctg 178  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||||||||| |||| ||||    
T  15521050 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatatatgggctg 15520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 52800856 - 52800800
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| ||||| |||||||||||||    
T  52800856 catataatcagtttatgagattaggaattgacataatttttagaatgaaaacaattg 52800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 15521110 - 15521074
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15521110 actagttacaaacccgtgcttcgcacgggttcaataa 15521074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 12680629 - 12680672
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||    
T  12680629 cactagttacaaacccgtgcttcgcacgggttgaataacgtatt 12680672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 43014589 - 43014632
Alignment:
Q  56 acactagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||    
T  43014589 acactagttacaaacccgtgcttcgcacgggttgaataacgtat 43014632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 574177 - 574219
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 574219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 2118232 - 2118190
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  2118232 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 2118190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 3759321 - 3759279
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 3759279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 5759383 - 5759341
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  5759383 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 5759341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 35707658 - 35707700
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  35707658 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 35707700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 37352142 - 37352100
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||    
T  37352142 actagttacaaacccgtgctttgcacaggttgaataacgtatt 37352100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 37357041 - 37356999
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||    
T  37357041 actagttacaaacccgtgctttgcacaggttgaataacgtatt 37356999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 39713496 - 39713538
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 39713538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 51348108 - 51348066
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||| ||||||| |||| |||||||||||    
T  51348108 actagttacaaacccgtgtttcgcacgggttgaataatgtatt 51348066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 15650486 - 15650527
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  15650486 actagttacaaacccgtgcttcgcacgggttgaataacgtat 15650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 19591122 - 19591081
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  19591122 actagttacaaacccgtgcttcgcacgggtttaataacgtat 19591081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 14828872 - 14828904
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaa 226  Q
    ||||||||||| |||||||||||||||||||||    
T  14828872 tgattaagagagcatataatcagtttatgagaa 14828904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 39404592 - 39404628
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  39404592 actagttacaaacccgtgcttcgcacgggttgaataa 39404628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 3e-86; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 58 - 425
Target Start/End: Complemental strand, 16342619 - 16342277
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||         |||| ||||||| |   ||||||||||||| ||||| |||||||    
T  16342619 actagttacaaacccgtgtttcgcacgggttcaataacgtattcgataaaaaaaaatctttgaaagaagagtaattaaaacgacggaacattatgattca 16342520  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||||||||| |||                 |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16342519 tcataaaatatgtatgagctgattaagagatcat-----------------ataatcagtttatgagaataaaaattgacataatatttaggatgaaaac 16342437  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  16342436 aa---gaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaagg 16342345  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  16342344 attgatagccatatttacatcaaatgaaatcaagcaaagaagtaacatcggtgagtgaatataatcta 16342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 58 - 425
Target Start/End: Original strand, 18741517 - 18741861
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| | || |||||||| |||||||||| |||||||||        || || ||||||| | || |||||||||||| |||||||||||||    
T  18741517 actagttacaaatctgtacttcgcacgggttcaataacgtattcgataaaaaaatttttt-gaaagaagagatgttaaaacgacggaacattgtgattca 18741615  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||| ||| ||  |||||||||||||||||| ||||||||    
T  18741616 tcataaaatatgtatgggctgat-----------------taagagagcatataatcagtttataagattaggaattgacataatatttagaatgaaaac 18741698  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||             |||||||||||||||||||||||||||| |    
T  18741699 aattggaaccaataaaggaaccaatgatgtgtgaatttaaatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 18741793  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  18741794 attgatacccatatttacatcaaatgcaatcaagcaaagaagtagcatcggtgagtgaagattatcta 18741861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 51249269 - 51248935
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| |||||||  |||| |||||||||| |||||||||        ||||||||||||| | ||  |||||||| || |||||||||||||    
T  51249269 actagttacaaatccgtgctatgcacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagagatgctaaaacgatggaacattgtgattca 51249171  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||| ||                 ||||| ||||||||| ||  |||||||||||||||||||||||||||    
T  51249170 tcataaaatatgtatgggctgattaagagagcacat-----------------aatcaatttatgagattatgaattgacataatatttaggatgaaaac 51249088  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||             |||||||||||||||||||||||||||| |    
T  51249087 aattggaaccaataaaggaaccaatgatgtgtgaatttatatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 51248993  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  51248992 attgatacccatatttacctcaaatgaaatcaagcaaagaactagcatcggtgagtga 51248935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 193 - 411
Target Start/End: Original strand, 54648297 - 54648510
Alignment:
Q  193 ttgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa 292  Q
    |||||||||||| ||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  54648297 ttgattaagagagcatgtaatcagtttatgagattagtaattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaa 54648396  T
Q  293 tttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagc 392  Q
    ||||||||||||||||||||||             |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54648397 tttacatattatccaaaattat-----aaaaaagagtgttgttattatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagc 54648491  T
Q  393 aaagaagtagcatcggtga 411  Q
    |||||||||||||||||||    
T  54648492 aaagaagtagcatcggtga 54648510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 52852744 - 52853078
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||        ||||||||||||| |||| ||||||| | || | ||| |||||||    
T  52852744 actagttacaaactcgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagatatgttaaaacaatggaatattatgattca 52852842  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    | |||||||||||||||||||||                 ||||||| |||||||||||||||||| | ||  |||| ||||||||||||||||||||||    
T  52852843 ttataaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgaaattaggaattaacataatatttaggatgaaaac 52852925  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||             |||||||||||||| |||||| |||||| |    
T  52852926 aattagaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttataaagttactaaaaaatg 52853020  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52853021 attgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 52853078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 196 - 415
Target Start/End: Complemental strand, 50742218 - 50742004
Alignment:
Q  196 attaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaattt 295  Q
    ||||||||| ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  50742218 attaagagagcatataaacagtttatgagattaggaattgacataatatttaggatgaaaacaattggaacaaataaaggaaccaatgatgtgtgaattt 50742119  T
Q  296 acatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaa 395  Q
    ||||||||||||||||| |             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50742118 acatattatccaaaattgt-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaa 50742024  T
Q  396 gaagtagcatcggtgagtga 415  Q
    |||||||||||| |||||||    
T  50742023 gaagtagcatcgatgagtga 50742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 21698994 - 21699210
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  21698994 tgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaatttgaaccaataaaggaactaatgatgtgtgaat 21699093  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||              ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  21699094 ttacatattatccaaaattataaaaaagaa-----tgttgttgttataaagttacgaaaaaatgattgatacccatatttacatcaaatgaaatcgagca 21699188  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  21699189 aagaagtagcatcggtgagtga 21699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 114 - 415
Target Start/End: Complemental strand, 54513701 - 54513416
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||||||||||| | || |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||               | ||||||||    
T  54513701 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatat-tatgggctgattaagagag---------------agcatataat 54513618  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaa 308  Q
    || ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||     ||||||||||||||    
T  54513617 caatttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaaggaaccaatgatgcgtgaattatgattacatattatccaa 54513518  T
Q  309 aattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcgg 408  Q
    ||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54513517 aattataaaaaaga-----gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcgg 54513423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 8243473 - 8243122
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| |||||| |||| |||||||||||||||| |||        | ||||||||||| | || ||||||| |||| |||||||||||||    
T  8243473 actagttacaaaccagtgctttgcacgggttcaataatgtattggatataaaaaat-cttcgaaagaatagatgttaaaacaacggaacattgtgattca 8243375  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  8243374 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttaggatgaaaac 8243292  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat-------nnnnnnnnnnnnngtgttgttgttatagagt 345  Q
    ||||||||||||||||| || |||||||||||||||     |||||||||||||||||||||                    ||||||||||||||||||    
T  8243291 aattggaaccaataaaggaatcaatgatgtgtgaattatgattacatattatccaaaattataaaaaaaaaaaaaaaaaaaagtgttgttgttatagagt 8243192  T
Q  346 taccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  8243191 taccaaaaaaggattgatactcatatttacatcagatgaaatcaagcaaagaagtagcatcagtgagtga 8243122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 23195109 - 23194820
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || |||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||                 ||||    
T  23195109 ttcttcgaaagaagagattttaaaacgacagaacattgtgattcatcataaaatatgtatggactgattaagagagcat-----------------ataa 23195027  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||     ||||||||||||||    
T  23195026 tcagtttatgagattagaaattgacataatatttaggatgaaaacaattggagctaataaagaaatcaatgatgtgtgaattatgattacatattatcca 23194927  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    ||||||              ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  23194926 aaatta-caaataaaaaaaagtgtttttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaattaagcaaagaagtaacatcg 23194828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 52462215 - 52462554
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| ||||||||||||| |||||||||| ||||| |||        ||||| ||||||| | || |||||||||||  ||||| |||||||    
T  52462215 actagttacaaatccgtgcttcgcacgggttcaataacgtatttgataaaaaat-ttctttgaaagaagagatgttaaaacgacgaaacattatgattca 52462313  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 |||||||  ||||||||||||||||||| ||  |||||| ||||||||||||||| ||||    
T  52462314 tcataaaatatgtatgggctgat-----------------taagagagaatataatcagtttatgagattaagaattgaaataatatttaggatggaaac 52462396  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||             |||||| ||||||||||||||||||    
T  52462397 aattggaaccaataaaggaaccaatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagtgttgctgttatagagttaccaaa 52462491  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  52462492 aaaggattgatactcatatttacatcagatgaaatcaagcaaagaagtagcatcagtgagtga 52462554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 52842498 - 52842211
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||                 ||    
T  52842498 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat-----------------aa 52842416  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||     ||||||||||||||    
T  52842415 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgacgtgtgaattatgattacatattatcca 52842317  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||              |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||     
T  52842316 aaattataaaaaagagcgt--tgttgttgttgtagagttaccaaaaaaggattgatacccatatttacataagatgaaatcaaacaaagaagtagcatca 52842219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 48520379 - 48520663
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||| |||||                 ||    
T  48520379 ttcttcgaaagaaaagatgttaaaacgacagaacattgtgattgatcataaaatatgtatgggctgatttagagatcatat-----------------aa 48520461  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||     |||||||||||||    
T  48520462 tcagtttatgagattaggaattgacataatatttagaatgaaaacaattggaaccaa-aaagtaaccaatgatgtgtgaattatgattacatattatcca 48520560  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |    
T  48520561 aaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcattg 48520655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 50770559 - 50770797
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  50770559 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 50770657  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  50770658 tcataaaatatgtatgggctgat-----------------taagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaac 50770740  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50770741 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 50770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 6103433 - 6103671
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||        ||||| ||||||||| || |||||||||| | ||||| |||||||    
T  6103433 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaaaagatgttaaaacgacagaacattatgattca 6103531  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||||||| ||||||                 |||||||||||||||| ||  |||||||||||||||||||||||||||    
T  6103532 tcataaaatatgtatgagctgattaagatagcata-----------------taatcagtttatgagattaggaattgacataatatttaggatgaaaac 6103614  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6103615 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 6103671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 55294120 - 55294404
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||| ||||                 |||    
T  55294120 ttcttcgaaagaaaagattttaaaacgacggaatattgtgattcatcataaaatatgcatgggctgatttagagatcata-----------------taa 55294202  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||    
T  55294203 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 55294301  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||| |    
T  55294302 aaattat-----aaaaaagagtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacataagatgaaatcaaacaaagaagtaacattg 55294396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 54934775 - 54934437
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||         ||||  |||||| | || ||||||||| || |||||||||||||    
T  54934775 actagttacaaacccgtgcttcgcacgggttcaataatgtattcgataaaaaaa--tctttaaaagaagagatgttaaaacgaaggaacattgtgattca 54934678  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||  |||||||||| |||||||                  || ||||||||||| ||  ||||||||||||||||||||||||||     
T  54934677 tcataaaatatgtatggactgattaagaaagcatatc-----------------attagtttatgagattaagaattgacataatatttaggatgaaaat 54934595  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| || |||||||||||||||     ||| |||||||||||||||||             |||||||||||||||||||||||||    
T  54934594 aattggaaccaataaaggaaacaatgatgtgtgaatcatgattatatattatccaaaattataaaaaata-----gtgttgttgttatagagttaccaaa 54934500  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||| ||||||||| |||||||| | || |||||||||||||||||||||||||| ||||||||    
T  54934499 aaatgattgatactcatatttaaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 54934437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 411
Target Start/End: Complemental strand, 49114018 - 49113700
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||           | |||||||| | || |||||||||||  |||||||||||||    
T  49114018 actagttacaaactcgtgcttcgcacaggttcaataacgtattcgataaaaaaaaaaat-cgaaagaagagatgttaaaacgacgaaacattgtgattca 49113920  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||| ||||||||| ||  ||||||||||||||||||||| |||||    
T  49113919 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcaatttatgagattaggaattgacataatatttaggataaaaac 49113837  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||| ||||            ||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |    
T  49113836 aattggaatcaat------------gatgtgtgaatttacatattatccaaaattataaaaaaga-----gtgttgttgttatagagttaccaaaaaatg 49113754  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49113753 attgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 49113700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 415
Target Start/End: Complemental strand, 32756345 - 32756145
Alignment:
Q  215 agtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaa 309  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||     |||||||||||||||    
T  32756345 agtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaa 32756246  T
Q  310 attatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggt 409  Q
    |||||             |||||||||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||||||||||||| ||    
T  32756245 attataaaaaaga-----gtgttgttgttatagagttaccaaaaaaggattgatactcatatttaaaacagatgaaatcaagcaaagaagtagcatcagt 32756151  T
Q  410 gagtga 415  Q
    ||||||    
T  32756150 gagtga 32756145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 19406744 - 19406864
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19406744 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 19406843  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  19406844 ttacatattatccaaaattat 19406864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 40824009 - 40824293
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||           ||      ||||||    
T  40824009 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagaga-----------aa------atataa 40824091  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
     |||||||||||| ||  |||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||     |||||||||||||    
T  40824092 acagtttatgagattaggaattgacataatattt-ggatgaaaacaatttgaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 40824189  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaag-gattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 406  Q
    |||||||             ||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40824190 aaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaatgattgatacccatatttacatcagatgaaatcaagtaaagaagtagcatc 40824284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 113 - 401
Target Start/End: Complemental strand, 39093241 - 39092972
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||                 ||    
T  39093241 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat-----------------aa 39093159  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||    
T  39093158 tcagtttatgagattaggaattgacataatatttaggatgcaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatcca 39093060  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagta 401  Q
    |||||||             ||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  39093059 aaattat-----aaaaaagagtgttgttgttgtagagttacgaaaaaa-gattgatacccatatttacatcagatgaaatcaaacaaagaagta 39092972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 31368327 - 31368566
Alignment:
Q  58 actagttacaaacccgtgcttcgcacagg-ttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattc 156  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||        ||||| ||||||| | || |||||||||||| ||||||||||||    
T  31368327 actagttacaaacccgtgcttcgcacggggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattc 31368425  T
Q  157 atcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaa 256  Q
    |||||||||||||||||  |||||                 ||||||| |||||||||||||||||| | ||  |||||||||||||||||| |||||||    
T  31368426 atcataaaatatgtatggactgat-----------------taagagagcatataatcagtttatgaaattaggaattgacataatatttagaatgaaaa 31368508  T
Q  257 caattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    | |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  31368509 ctattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 31368566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 35087163 - 35087390
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||        |||||  |||||| | || |||||||||||| |||||||||||||    
T  35087163 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattctttaaaagaagagatgttaaaacgacggaacattgtgattca 35087262  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    || ||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  35087263 tcgtaaaatatgtatgggctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 35087345  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||            |||||||||||||||||||||||||||||||||||||||    
T  35087346 aattgg------------aaccaatgatgtgtgaatttacatattatccaaaattat 35087390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 2843461 - 2843546
Alignment:
Q  330 gttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2843461 gttgttgttagagagttaccaaaaaaggattgatacccatatttacctcagatgaaatcaagcaaagaagtagcatcggtgagtga 2843546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 4138190 - 4138310
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4138190 tgatttagagatcatataatcagtttatgagattagaaattgacataatgtttaggatgaaaacaattggaaccaa-aaagaaaccaatgatgtgtgaat 4138288  T
Q  294 -----ttacatattatccaaaa 310  Q
         |||||||||||||||||    
T  4138289 tatgattacatattatccaaaa 4138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 415
Target Start/End: Original strand, 11597496 - 11597583
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11597496 gtgttgttcttatagagttaccaaaaaaagattgatacccatatttacatcagatgaaatcaagcaaagaagtagcattggtgagtga 11597583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 2839632 - 2839733
Alignment:
Q  193 ttgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa 292  Q
    |||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||    
T  2839632 ttgattaagagaacatataatcagtttatgagattaagaattgacataatatttaggatgaaaacaattgaaaccaataaaggaatcaatgatgtgttaa 2839731  T
Q  293 tt 294  Q
    ||    
T  2839732 tt 2839733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 26777272 - 26777456
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||  |||| ||||                 |||    
T  26777272 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttcgagatcata-----------------taa 26777354  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  ||||| |||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||     ||||||||||||||    
T  26777355 tcagtttatgagattaggaattggcataatgtttaggatgaaaacaattggaaccaa-aaaggaactaatgatgtgtgaattatgattacatattatcca 26777453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 32756477 - 32756348
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||| ||  ||||||||||| ||||||||        |||||| |||||| | ||  ||||||||||| |||||||||||||    
T  32756477 actagttacaaacccgtgcttcacatgggttcaataatatattcgataaaaaaa-ttcttcaaaagaagagatggtaaaacgacggaacattgtgattca 32756379  T
Q  158 tcataaaatatgtatgagctgattaagagag 188  Q
    |||||||||||||||| ||||||||||||||    
T  32756378 tcataaaatatgtatgggctgattaagagag 32756348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 21698931 - 21699010
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||| ||||||| | || |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  21698931 tctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggactgattaagagagcatat 21699010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 415
Target Start/End: Complemental strand, 48977381 - 48977310
Alignment:
Q  344 gttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  48977381 gttaccaaaaaataatcgatacccatatttacatcaaatgaaatcaagcaaagaagtagaatcagtgagtga 48977310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 19353836 - 19353702
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||| | ||||||||||| |||||||||| |||||||||        ||||| ||||||| | || ||||||||| |  |||||||||||||    
T  19353836 actagttacaaatctgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgatgaaacattgtgattca 19353738  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||||   |||||||||||||||||    
T  19353737 tcataaaatatgtatggattgattaagagagcatat 19353702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 11597309 - 11597442
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||           |  ||||||||| ||||||||||||||  |||||||||||||    
T  11597309 actagttacaaacccgtgtttcgcacggattcaataatgtattcgataaaaaaaaaatt--gaaagaaaagatattaaaacgacgaaacattgtgattca 11597406  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||||||||||||  ||||||| ||||| |||||    
T  11597407 tcataaaatatgtataggctgatttagagatcatat 11597442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 39796413 - 39796474
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctg 178  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  39796413 tcgaaagaaaatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctg 39796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 19406626 - 19406760
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||   ||||||||||||| | |||||||||        |||||  ||| || | || ||||||||| |  |||||||||||||    
T  19406626 actagttacaaacccgtgcgaagcacaggttcaatgacgtattcgattaaaaaa-ttctttaaaaaaagagatgttaaaacgatgaaacattgtgattca 19406724  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||| |||| |||||||||||||||||||    
T  19406725 tcataaaatatatatgggctgattaagagagcatat 19406760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 6103700 - 6103749
Alignment:
Q  366 ccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  6103700 ccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 6103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 31368586 - 31368638
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  31368586 atacccatatt-acatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 31368638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 50770817 - 50770870
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  50770817 atacccatattgacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 50770870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 54648235 - 54648312
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcat 191  Q
    |||| ||||||| | || ||||||||| || ||||||||||||||||||||||||||||  | |||||||||||||||    
T  54648235 tctttgaaagaagagatgttaaaacgatggaacattgtgattcatcataaaatatgtataggttgattaagagagcat 54648312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 48989022 - 48988911
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatc 159  Q
    |||||||||||| ||| ||||||| |||||||||| ||||| |||        | |||||||||||   || |||||||||||| |||||||||||||||    
T  48989022 tagttacaaaccagtgtttcgcacgggttcaataacgtatttgataaaaaaaat-cttcgaaagaagtgatgttaaaacgacggaacattgtgattcatc 48988924  T
Q  160 ataaaatatgtat 172  Q
    |||||||||||||    
T  48988923 ataaaatatgtat 48988911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 48977754 - 48977676
Alignment:
Q  194 tgattaagagaccatataatcagttt--atgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 270  Q
    |||| |||||| ||||||||||||||  |||||| |   |||||||||||| |||||||||||||||||||||||||||    
T  48977754 tgatcaagagagcatataatcagtttttatgagattttgaattgacataatttttaggatgaaaacaattggaaccaat 48977676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 53801068 - 53800998
Alignment:
Q  244 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 310  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  53801068 tttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 53800998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 35087410 - 35087461
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  35087410 atacccatatttacatcaaatgaaa--aagcaaagaagtagcatcagtgagtga 35087461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 4138129 - 4138186
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||| |||| || ||||||| |||| |||||||||||||||||||||||||||||    
T  4138129 ttcgaaaaaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatg 4138186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 5252314 - 5252370
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||| ||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  5252314 tcgaaggaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 5252370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 50742337 - 50742224
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||         |||||  ||||||   ||  ||||| ||||| |||||||||||||    
T  50742337 actagttacaaacccgtgcttcgcacgggttcaataacgtatttga--aaaaaaattctttaaaagaagtgatgctaaaatgacggaacattgtgattca 50742240  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  50742239 tcataaaatatgtatg 50742224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 26100778 - 26100820
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  26100778 actagttacaaacccgtgcttcgcacgggttgaataatgtatt 26100820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 5252254 - 5252290
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5252254 actagttacaaacccgtgcttcgcacgggttcaataa 5252290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 188778 - 188736
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||    
T  188778 cactagttacaaacccgtgcttcgcacgggttgaataacgtat 188736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 4137400 - 4137442
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  4137400 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 4137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 8396807 - 8396765
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  8396807 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 8396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 18688715 - 18688673
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  18688715 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 18688673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 22477947 - 22477905
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  22477947 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 22477905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 35861043 - 35861001
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  35861043 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 35861001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 52843226 - 52843184
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaataatgtatt 52843184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 19406873 - 19406910
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatac 365  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  19406873 gtgttgttgtaatagagttaccaaaaaatgattgatac 19406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 26035814 - 26035855
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    ||||||||||||||||||| |||||| |||| ||||||||||    
T  26035814 actagttacaaacccgtgcgtcgcacgggttgaataatgtat 26035855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 39796354 - 39796391
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  39796354 cactagttacaaacccgtgcttcgcatgggttcaataa 39796391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5241029 - 5240993
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  5241029 actagttacaaacccgtgcttcgcacgggttgaataa 5240993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 21165931 - 21165967
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  21165931 actagttacaaacccgtgcttcgcacgggttgaataa 21165967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 22522312 - 22522276
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaataa 22522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 26776434 - 26776470
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  26776434 actagttacaaacccgtgcttcgcacgggttgaataa 26776470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 39576576 - 39576532
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtattc 101  Q
    |||||||||||||||||||||||||||  ||| ||||| ||||||    
T  39576576 cactagttacaaacccgtgcttcgcacgagttgaataacgtattc 39576532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 44186859 - 44186895
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||||||||  |||||||||    
T  44186859 actagttacaaacccgtgcttcgcacgagttcaataa 44186895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 9e-80; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 193 - 415
Target Start/End: Complemental strand, 17940353 - 17940136
Alignment:
Q  193 ttgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa 292  Q
    |||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17940353 ttgattaagagaacatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa 17940254  T
Q  293 tttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagc 392  Q
    |||||||||||||||||||| |             |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  17940253 tttacatattatccaaaattgt-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagc 17940159  T
Q  393 aaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||    
T  17940158 aaagaagtagcatcggtgagtga 17940136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 18312741 - 18312406
Alignment:
Q  58 actagttacaaacccgtgctt-cgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattc 156  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||        | ||| ||||||| | || || ||||||| | ||||||||||||    
T  18312741 actagttacaaacccgtgctttcgcacgggttcaataacgtatttgataaaaaaaat-ctttgaaagaagagatgttgaaacgacagaacattgtgattc 18312643  T
Q  157 atcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaa 256  Q
    ||||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || |||||||||||||||||||||||||||    
T  18312642 atcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaaa 18312560  T
Q  257 caattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaag 356  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||     
T  18312559 taattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaat 18312465  T
Q  357 gattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||| ||||||||||||||||| ||||||| || ||| |||||||||    
T  18312464 gattgatacccatattcacatcaaatgaaatcaaacaaagaactaacattggtgagtga 18312406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 35042038 - 35041704
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| ||||||| |||||||||| ||||| |||        ||||| ||||||| | || |||||||||||| | |||||||||||    
T  35042038 actagttacaaacccgtgtttcgcacgggttcaataacgtatttgataaaaaaaattctttgaaagaagagatgttaaaacgacggaagattgtgattca 35041939  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || |||||||||||||||||||||||||| |    
T  35041938 tcataaaatatgtatgtgctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaa-c 35041857  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             |||||||| |||||||||||| ||||||      
T  35041856 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttattatagagttactaaaaaata 35041762  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  35041761 attgatacccatattcacatcaaatgaaatcaaacaaagaagtaacattggtaagtga 35041704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 22373140 - 22373474
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||  ||||||||||| |||||||||| |||||||||        ||||| ||||||| |||| ||||||| |||| | |||||||||||    
T  22373140 actagttacaaacatgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagatatgttaaaactacggaatattgtgattca 22373238  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||                 ||||||| || ||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  22373239 tcataaaatatgtatgagctgat-----------------taagagagcacataatcagtttatgagattaggaattgacataatatttaagatgaaaac 22373321  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||             ||||| |||||||||||||||||||||| |    
T  22373322 aattagacccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttcttgttatagagttaccaaaaaatg 22373416  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  22373417 attgatacccatattgacatcaaatgaaatcaagcaaaaaagtagcatcagtgagtga 22373474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 194 - 413
Target Start/End: Complemental strand, 15276468 - 15276254
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| |   |||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  15276468 tgattaagagatcatataatcagtttatgagattgggaattaacataatatttatgataaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 15276369  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15276368 ttacatattatccaaaattat-----aaaaaagagtgatgttgttatagagttaccaaaaagggattgatacccatatttacatcaaatgaaatcaagca 15276274  T
Q  394 aagaagtagcatcggtgagt 413  Q
    ||||||||||||| ||||||    
T  15276273 aagaagtagcatcagtgagt 15276254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 231 - 415
Target Start/End: Complemental strand, 4425281 - 4425101
Alignment:
Q  231 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtg 330  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             |||    
T  4425281 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtg 4425187  T
Q  331 ttgttgttatagagttacc-aaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  4425186 ttgttgttatagagttaccaaaaaaatgattgatacccagatttgcatcaaatgaaatcaagcaaagaagtagcatcggtcagtga 4425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 33320864 - 33321084
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||    
T  33320864 tgatttagagatcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattagaaccaa-aaaggaaccaatgatgtgttaat 33320962  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     ||||| ||||||||||||||             ||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  33320963 tatgattacatgttatccaaaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttatatcagatgaaatc 33321057  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||    
T  33321058 aagcaaagaagtagcatcggtgagtga 33321084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 18598305 - 18598543
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||        || || ||||||| | || |||||||||||| |||||||||||||    
T  18598305 actagttccaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttatttgaaagaagagatgttaaaacgacggaacattgtgattca 18598403  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||| |||||||||||||                 |||||||||||||||| ||  |||||||||||||||||||||||||||    
T  18598404 tcataaaatatgtatgggctgcttaagagagcata-----------------taatcagtttatgagattaggaattgacataatatttaggatgaaaac 18598486  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18598487 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 18598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 21800468 - 21800230
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| ||||||||||||||||  |||||||||| |||||||||        ||||| ||||||| | || | |||||||||| |||||||||| ||    
T  21800468 actagttataaacccgtgcttcgcattggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgtaaaaacgacggaacattgtgatgca 21800370  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||| ||||||||||||||||                 ||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  21800369 tcataaaatatgtatgacctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttaggatgaaaac 21800287  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21800286 tattggaaccaataaagaaatcaatgatgtgtgaatttacatattatccaaaattat 21800230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 11932802 - 11933040
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||        | |||  |||||| |||  |||||||||||| |||||||||||||    
T  11932802 actagttacaaactcgtgcttcgcacgggttcaataatgtattcgataaaaaaaat-ctttaaaagaagataagttaaaacgacggaacattgtgattca 11932900  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||| |||||                 |||||||  |||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  11932901 tcataaaatatgtatgacctgat-----------------taagagagtatataatcagtttaagagattaggaattgacataatatttaggatgaaaac 11932983  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11932984 aattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 11933040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 33814918 - 33814680
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||| ||| ||||| |||        | ||| ||||||| | ||  ||||||||||  |||||||||||||    
T  33814918 actagttacaaacccgtgcttcgcacgggttcagtaacgtatttgataaaaaaaat-ctttgaaagaagagatgataaaacgacgaaacattgtgattca 33814820  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| | |||||||||||||                 ||||||||| ||||||||| ||  |||||||||||||||||||||||||||    
T  33814819 tcataaaatatgtatgggatgattaagagagc-----------------atataatcaatttatgagattaggaattgacataatatttaggatgaaaac 33814737  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33814736 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 33814680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 1072583 - 1072821
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||  |||| ||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| ||||||  |||||    
T  1072583 actagttacaaattcgtgtttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgaaattca 1072681  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||||||||                 |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  1072682 tcataaaatatgtatgggctgattaagagag-----------------catataatcagtttatgagattaggaattgacataatatttaggatgaaaac 1072764  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  1072765 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 1072821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 7223131 - 7222927
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||| |||            ||||||||||||| |||||    
T  7223131 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaagatgaaaacatttg------------aaaccaatgatgtatgaat 7223044  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  7223043 ttacatattatccaaaattataaaaaaga-----gtgttgttgtaatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagca 7222949  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||| ||||||||    
T  7222948 aagaagtagcatcagtgagtga 7222927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 34856761 - 34856641
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  34856761 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 34856662  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  34856661 ttacatattatccaaaattat 34856641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 14832383 - 14832099
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||                 ||    
T  14832383 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatatatgggctgatttagagatcatat-----------------aa 14832301  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||     ||||||||||||||    
T  14832300 tcagtttatgagattaggagttgacataatatttaggatgaaaacaattggaaccaa-aaacgaaccaatgatgtttgaattatgattacatattatcca 14832202  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||  ||||    
T  14832201 aaattat----aaaaaacgagtgttgttgttgtagagttaccaaaaaaggattgata-ccatatatacatcagatgaaatcaaacaaagaagtataatcg 14832107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 195 - 415
Target Start/End: Complemental strand, 34321919 - 34321711
Alignment:
Q  195 gattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt 294  Q
    |||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| | |  |  ||| |||       |    
T  34321919 gattaagagagcatataatcagtttatgagattagaaattggcataatatttaggatgaaaacaattggaaccaatgatgtgag-aattatga------t 34321827  T
Q  295 tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaa 394  Q
    |||| |||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  34321826 tacacattatccaaaattataaaaaaga-----gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaagaaa 34321732  T
Q  395 agaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||    
T  34321731 agaagtagcatcggtgagtga 34321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 14887376 - 14887496
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||    
T  14887376 tgattaagagagcatataatcagtttatgagattaagaattgacataatatttaggatgaaaactattgaaaccaataaaggaatcaatgatgtgtgaat 14887475  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||| ||||||||    
T  14887476 ttacatattatcaaaaattat 14887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 25540775 - 25540548
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  25540775 tgatttagagatcatataatcagtttatgagattaggaattgacataatgtttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaat 25540677  T
Q  294 -----ttacatattatccaaaattat--nnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaa 386  Q
         |||||||||||||||||||||                   ||||||| |||| ||||||||||| |||||||||||||||||| |||| ||||||    
T  25540676 tatgattacatattatccaaaattataaaaaaaaaaaaaaaaaagtgttgttgtagaattaccaaaaaatgattgatacccatatttaaatcagatgaaa 25540577  T
Q  387 tcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||| ||||||||    
T  25540576 tcaagcaaagaagtagcatcagtgagtga 25540548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 30044905 - 30044814
Alignment:
Q  334 ttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| ||| |||||    
T  30044905 ttgttatagagttaccaaaaaaggattgatactcatatttacatcaaaagaaatcaagcaaagaagtagcatcagtgagtgaatataatcta 30044814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 2522065 - 2521931
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        ||||| ||||||| | || |||||| ||||| |||||||||||||    
T  2522065 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaatgacggaacattgtgattca 2521967  T
Q  158 tcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||||||||||||||||| |||||||||||||||||    
T  2521966 tcataaaatatgtatgagttgattaagagagcatat 2521931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 4108625 - 4108441
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||| |||||||||||||| ||||||| ||||| |||||                 ||    
T  4108625 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcattataaaatatgtatgggctgatttagagatcatat-----------------aa 4108543  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||     ||||||||||||||    
T  4108542 tcagtttatgagattaagaattgacataatatttaggatgaaaacaataggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 4108444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 35158870 - 35158714
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||  |||||| ||||| |||||                 ||    
T  35158870 ttcttcgaaagaaaatatgttaaaacgacggaacattgtgattcatcataaaatctgtatggactgatttagagatcatat-----------------aa 35158788  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgt 287  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  35158787 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgt 35158714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 2521932 - 2521856
Alignment:
Q  238 ataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  2521932 ataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 2521856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 1220425 - 1220345
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  1220425 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 1220345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 9979441 - 9979521
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  9979441 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 9979521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 24445834 - 24445754
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24445834 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 24445754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 4425373 - 4425293
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||| | || |||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  4425373 ttcttcgaaagaagagatgttaaaacgacggaacattatgattcatcataaaatatgtatgggttgattaagagagcatat 4425293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 2521834 - 2521781
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2521834 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 2521781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 11933060 - 11933113
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11933060 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 11933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 14887516 - 14887569
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14887516 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 14887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 18598563 - 18598616
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18598563 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 18598616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 33814660 - 33814607
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33814660 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 33814607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14887313 - 14887392
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    |||| ||||||| | || |||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  14887313 tctttgaaagaagagatgttaaaacgacagaacattgtgattcatcataaaatatgtataggctgattaagagagcatat 14887392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 1072841 - 1072894
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  1072841 atacccatatttacatcaaatgaaatcaaacaaagaagtagcatcagtgagtga 1072894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 15276584 - 15276458
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaa-atatattaaaacgacgggacattgtgattc 156  Q
    ||||||||||||| |||||||||||| |||||||||| |||||| ||        ||    |||||||| | || |||||| ||||| | ||||||||||    
T  15276584 actagttacaaactcgtgcttcgcacgggttcaataacgtattcaataaaaaaaatt----gaaagaaagagatgttaaaatgacggaatattgtgattc 15276489  T
Q  157 atcataaaatatgtatgagctgattaagaga 187  Q
    |||||||||||||||||||||||||||||||    
T  15276488 atcataaaatatgtatgagctgattaagaga 15276458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 21800210 - 21800157
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  21800210 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 21800157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 34856621 - 34856568
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34856621 atactcatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 34856568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 1220349 - 1220293
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  1220349 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 1220293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 24445758 - 24445702
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  24445758 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 24445702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 28573340 - 28573418
Alignment:
Q  236 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 310  Q
    ||||||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  28573340 acataatgtttaggatgaaaacgattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 28573418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 33320801 - 33320860
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||| |||||||| || |||||||||| | |||||||||||||||||||||||||||||    
T  33320801 tcttcaaaagaaaagatgttaaaacgacagaacattgtgattcatcataaaatatgtatg 33320860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 25540890 - 25540779
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||            ||||||||||| |||||||||||||   | ||| |||||||    
T  25540890 actagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaa----tcgaaagaaaagatattaaaacgacaaaaaattatgattca 25540795  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  25540794 tcataaaatatgtatg 25540779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 9979517 - 9979573
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| ||||| |||||||||||||    
T  9979517 catataatcagtttatgagattaggaattgacataatttttagaatgaaaacaattg 9979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 17940415 - 17940356
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||||||||||| | ||  |||||||| || |||||||||||||||||||||||||||||    
T  17940415 tcttcgaaagaagagatgctaaaacgatggaacattgtgattcatcataaaatatgtatg 17940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 34321984 - 34321926
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgta 171  Q
    ||||||||||||| | || ||||||| |||| ||||||||||||||||| |||||||||    
T  34321984 ttcttcgaaagaagagatgttaaaacaacggaacattgtgattcatcatgaaatatgta 34321926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 11168956 - 11168916
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  11168956 tagttacaaacccgtgcttcgcacaggttaaattatgtatt 11168916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13456735 - 13456771
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13456735 actagttacaaacccgtgcttcgcacgggttcaataa 13456771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 13456793 - 13456849
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| ||||||||| || ||||| | |||||||||||||||||||||    
T  13456793 tcgaaagaagatatgttaaaacgatggaacattataattcatcataaaatatgtatg 13456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 34856825 - 34856765
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||| ||||||| | || ||||||| |||| ||||| |||||||||||||||||||||||    
T  34856825 ttctttgaaagaagagatgttaaaactacggaacattatgattcatcataaaatatgtatg 34856765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 4110102 - 4110060
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 4110060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 6966237 - 6966279
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  6966237 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 6966279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 7223249 - 7223136
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||| ||||||| |||||||| | ||||| |||        || || ||||||| | || |||||| || || |||||||||||||    
T  7223249 actagttacaaacctgtgtttcgcacgggttcaatgacgtatttgataaaaaaaattttt-gaaagaagagatgttaaaatgatggaacattgtgattca 7223151  T
Q  158 tcataaaatatgtat 172  Q
    |||||||||||||||    
T  7223150 tcataaaatatgtat 7223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 22323828 - 22323782
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgat 104  Q
    |||||||||||||||||||||||||| |||||| |||  ||||||||    
T  22323828 actagttacaaacccgtgcttcgcacgggttcagtaacatattcgat 22323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 24447836 - 24447794
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  24447836 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 24447794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 18389168 - 18389209
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  18389168 actagttacaaacccgtgcttcgcacgggttgaataacgtat 18389209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 30044960 - 30044919
Alignment:
Q  273 agaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||    
T  30044960 agaaaccaacgatatgtgagtttacatattatccaaaattat 30044919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 33319090 - 33319049
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  33319090 actagttacaaacccgtgcttcgcacgggttgaataacgtat 33319049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 9e-77; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 44407335 - 44407000
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||         |||||||||||| | || |||||||||||| |||||||||||||    
T  44407335 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatcttcgaaagaagagatgttaaaacgacggaacattgtgattca 44407236  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||| |||||||||                 ||||||||||| ||| || ||||||||||||||||||||||||||||    
T  44407235 tcataaaatatgtatgggctgattaaaagagcatat-----------------aatcagtttataagattagaaattgacataatatttaggatgaaaac 44407153  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |    
T  44407152 aattggaactaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatg 44407058  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| | |||| |||||||||| |||||||||| ||| |||||||||    
T  44407057 attgatacccatattcagatcagatgaaatcaaacaaagaagtaacattggtgagtga 44407000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 58 - 411
Target Start/End: Original strand, 38844474 - 38844814
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||| |||| || |||||||||| |||||||||        ||||||||||||| | || |||||| || || |||||||||||||    
T  38844474 actagttacaaacccgtgtttcgtacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagagatgttaaaatgatggaacattgtgattca 38844572  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  38844573 tcataaaatatgtatgggctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 38844655  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat----nnnnnnnnnnnnngtgttgttgttatagagttacc-aaa 352  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||                 |||||||||||||||||||||| |||    
T  38844656 aattggaaccaataaaggaaccaatgatctgtgaatttacgtattatccaaaattataaaaaaaaaaaaaaaaagtgttgttgttatagagttaccaaaa 38844755  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38844756 aaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagaatcggtga 38844814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 113 - 413
Target Start/End: Complemental strand, 52310758 - 52310476
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||                 ||    
T  52310758 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagatgatttagagatcatat-----------------aa 52310676  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||     ||||||||||| |    
T  52310675 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtatgaattatgattacatattatcta 52310577  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  52310576 aaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcatatgaaatcaaacaaagaagtagcatcg 52310482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 47 - 415
Target Start/End: Complemental strand, 45005758 - 45005410
Alignment:
Q  47 ttttattgcacactagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggac 146  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||        ||||| ||||||| | || ||||||||| ||  |    
T  45005758 ttttattgtaaactagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaa--ttctttgaaagaagagatgttaaaacgatggagc 45005661  T
Q  147 attgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatattt 246  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||                 ||| ||||||||||| ||  ||||||||||||||||    
T  45005660 attgtgattcatcataaaatatgtataggctgattaagaaagcatat-----------------aattagtttatgagattaggaattgacataatattt 45005578  T
Q  247 aggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttata 341  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||     |||||||||||||||||||||             ||||||||||||||    
T  45005577 aggatgaaaacaattggaaccaataaagaaa-taatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagtgttgttgttata 45005484  T
Q  342 gagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| |||||||| |||||||| | || |||||||||||||||||||||||||| ||||||||    
T  45005483 gagttaccaaaaaagaattgatactcatatttaaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 45005410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 34693060 - 34692828
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||       |||||||||| |||||||||        ||||| ||||||| | ||||||||||||||| |||||||||||||    
T  34693060 actagttacaaacccgtgct-------ggttcaataacgtattcgataaaaaaaattctttgaaagaatagatattaaaacgacggaacattgtgattca 34692968  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||||||||||||||||||||||||||||||||                 ||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  34692967 tcataaaatatgtatgagctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttaggatgaaaac 34692885  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34692884 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat 34692828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 31620640 - 31620402
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        | ||| ||||||| | || |||||||||| | |||||||||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaat-ctttgaaagaagagatgttaaaacgacagaacattgtgattca 31620542  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| ||  |||||||||||| ||||||||||||||    
T  31620541 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattatgaattgacataatttttaggatgaaaac 31620459  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  31620458 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 31620402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 48341176 - 48340955
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||| | ||| |||||||||| ||||| ||  |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  48341176 tgattaagaaagcatctaatcagtttttgagattaggaattgacataatatttagaatgaaaacaattggaactaataaaggaaccaatgatgtgtgaat 48341077  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     |||||||||||||||||||               |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48341076 tatgattacatattatccaaaattacaaaaaaaaa-----tgtttttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 48340982  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||| |||| ||||||||    
T  48340981 aagcaaagaagtaacatcagtgagtga 48340955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 34688532 - 34688300
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||       |||||||||| |||||||||        ||||| ||||||| | ||||||||||||||| |||||||||||||    
T  34688532 actagttacaaacccgtgct-------ggttcaataacgtattcgataaaaaaaattctttgaaagaatagatattaaaacgacggaacattgtgattca 34688440  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  34688439 tcataaaatatgtatgggctgattaagagagcat-----------------ataatcagtttatgagattaggaattgacataatatttaggatgaaaac 34688357  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  34688356 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 34688300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 58 - 412
Target Start/End: Complemental strand, 36683016 - 36682681
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||||        ||||| ||||||| | || ||||||||||||  ||||||||||||    
T  36683016 actagttataaacccatgcttcgcacgggttcaataatgtattcgataaaaaa--ttctttgaaagaagagatgttaaaacgacggagcattgtgattca 36682919  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||||| | |||||                 ||| ||||||||||| ||  |||||||||||||||||||||||||||    
T  36682918 tcataaaatatgtatgggctgattaagaaaacatat-----------------aattagtttatgagattaggaattgacataatatttaggatgaaaac 36682836  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||| ||||||||||||  || |||||||||||     |||||||||||||||||||||             |||||||||||||||||||||||||    
T  36682835 aattggatccaataaagaaa-taaggatgtgtgaattatgattacatattatccaaaattat----aaaaaaagagtgttgttgttatagagttaccaaa 36682741  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 412  Q
    |||| |||||||| |||||||| | || |||||||||||||||||||||||||| |||||    
T  36682740 aaagaattgatactcatatttaaaacagatgaaatcaagcaaagaagtagcatcagtgag 36682681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 41829350 - 41829588
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||| |||| |||||||||| ||||| |||        ||||| ||||||| |  | |||||||||||| ||||| |||||||    
T  41829350 actagttacaaacccgtgctttgcac-ggttcaataacgtatttgataaaaaaaattctttgaaagaatagttgttaaaacgacggaacattatgattca 41829448  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  41829449 tcataaaatatgtatgggctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 41829531  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  41829532 tattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 41829588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 50561907 - 50561689
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| ||||||||||||||||||   ||  |||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||    
T  50561907 tgatttagagatcatataatcagtttatgat--taggaattgacataatatttagaatgaaaacaattgaaaccaa-aaaggaaccaatgatgtgtgaat 50561811  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     ||||||||||||||||||||             ||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  50561810 tatgattacatattatccaaaattataaaaaaga-----gtgttgttgttttagagttatcaaaaaaggattgatactcatatttacatcagatgaaatc 50561716  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||    
T  50561715 aagcaaagaagtagcatcggtgagtga 50561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 114 - 314
Target Start/End: Original strand, 52520972 - 52521155
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||| ||||||| | || |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||                 ||||||||    
T  52520972 tctttgaaagaatagatgttaaaacgacggaacattgtgattcatcataaaatacgtatgagctgattaagagag-----------------catataat 52521054  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatta 313  Q
    |||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  52521055 cagtttatgagattatgaattgacataatatttaggatgaaaataattggaaccaataaaggaaccaatgatatgtgaatttacatattattcaaaatta 52521154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 17672428 - 17672090
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||         ||   ||||||| | || |||||||||||| |||||||||||||    
T  17672428 actagttacaaacccgtgcgaagcacgggttcaataatgtattcgataaaaaaaaatc---gaaagaagagatgttaaaacgacggaacattgtgattca 17672332  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 | ||| | ||||||||| ||  |||||||||||||||||||| ||||||    
T  17672331 tcataaaatatgtatgggctgattaagagagcat-----------------aaaattaatttatgagattaggaattgacataatatttaggacgaaaac 17672249  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttacc-aa 351  Q
     |||||||||||||||| || |||||||||||||||     |||||||||||||||||||||             | |||||||||||||||||||| ||    
T  17672248 cattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagcgttgttgttatagagttaccaaa 17672154  T
Q  352 aaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||| |||||||||||||||||| |  | |||||||||||||||||||||||||| ||||||||    
T  17672153 aaaaagattgatacccatatttaaaatagatgaaatcaagcaaagaagtagcatcagtgagtga 17672090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 215 - 415
Target Start/End: Original strand, 12245304 - 12245505
Alignment:
Q  215 agtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaa 309  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||     |||||||||| ||||    
T  12245304 agtttatgagattataatttgacataatatttatgatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattattcaaa 12245403  T
Q  310 attatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaa-aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcgg 408  Q
    |||||             |||||||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||||||| |||||||||| |    
T  12245404 attataaaaaaga-----gtgttgttgttatagagttaccaaaaaaaggattgatacccatatttaaaacagatgaaatcaagcaaataagtagcatcag 12245498  T
Q  409 tgagtga 415  Q
    |||||||    
T  12245499 tgagtga 12245505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 18815046 - 18814932
Alignment:
Q  200 agagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacat 299  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  18815046 agagatcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacat 18814947  T
Q  300 attatccaaaattat 314  Q
    |||||||||||||||    
T  18814946 attatccaaaattat 18814932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 211 - 314
Target Start/End: Original strand, 41962362 - 41962465
Alignment:
Q  211 aatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaa 310  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  41962362 aatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaa 41962461  T
Q  311 ttat 314  Q
    ||||    
T  41962462 ttat 41962465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 116 - 314
Target Start/End: Complemental strand, 47136195 - 47136010
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 |||||    
T  47136195 ttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aatca 47136113  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 310  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  47136112 gtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 47136014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 12245172 - 12245301
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||        ||||||||||||| | ||||||||||||||| |||||||||||||    
T  12245172 actagttacaaacccgtgctttgcacgggttcaataatatattcgataaaaaaa-ttcttcgaaagaagagatattaaaacgacggaacattgtgattca 12245270  T
Q  158 tcataaaatatgtatgagctgattaagagag 188  Q
    |||||||||||||||||||||||||||||||    
T  12245271 tcataaaatatgtatgagctgattaagagag 12245301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 404
Target Start/End: Original strand, 51965252 - 51965451
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||            |||||||||||    
T  51965252 tgatttagagatcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaat------------gatgtgtgaat 51965339  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     |||||||||||||||| |||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51965340 tatgattacatattatccaaaagtataaaaaaaga----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatc 51965435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 10694196 - 10694320
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  10694196 tgattaagagatcatataatcagtttatgagattaagaattgacataatatttaggatgaaaacaattggaaacaa-aaaggaaccaatgatgtgtgaat 10694294  T
Q  294 -----ttacatattatccaaaattat 314  Q
         |||||||||||||||||||||    
T  10694295 tatgattacatattatccaaaattat 10694320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 314
Target Start/End: Original strand, 16030959 - 16031128
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaa 231  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||                 |||||||  ||||||| ||||||||||| ||  |    
T  16030959 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgat-----------------taagagagaatataattagtttatgagattagga 16031041  T
Q  232 attgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat----ttacatattatccaaaattat 314  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |    |||||||||||||||||||||    
T  16031042 attgacataatatttaggatgaaaacaattggaactaataaaggaaacaatgatgtgtgattatgattacatattatccaaaattat 16031128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 116 - 310
Target Start/End: Complemental strand, 5426896 - 5426715
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    |||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 |||||    
T  5426896 ttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aatca 5426814  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 310  Q
    |||||||||| ||  |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  5426813 gtttatgagattatgaattgacataatgtttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 5426715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 24294911 - 24294791
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattc 156  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||        ||||||||||||| |||| |||||||||||| ||||||||||||    
T  24294911 cactagttacaaacccgtgcttcgcacgggttcaataacgtatttgataaaataa-ttcttcgaaagaagatatgttaaaacgacggaacattgtgattc 24294813  T
Q  157 atcataaaatatgtatgagctg 178  Q
    ||||||||||||||||| ||||    
T  24294812 atcataaaatatgtatgggctg 24294791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 10694347 - 10694430
Alignment:
Q  328 gtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  10694347 gtgttgttgttgtagagttaccaaaaaagaattgatacccatatttacatgagatgaaatcaagcaaagaagtagcaccggtga 10694430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 16300966 - 16300781
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| |                 |||||| ||||| |||||||    
T  16300966 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatggg-----------------ttgatttagagatcatataa 16300884  T
Q  213 tcagtttatgagaatacaaattgacataat-atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcc 306  Q
    ||||||||||||| ||  ||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||    
T  16300883 tcagtttatgagattaggaattgacataatgttttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcc 16300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 16031156 - 16031241
Alignment:
Q  330 gttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||| |||||| ||||||||    
T  16031156 gttgttgttatagagttaccaaaaaaagattgatacccatatttaaaacagatgaaatcaagcaaagaagcagcatcagtgagtga 16031241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 4892007 - 4891927
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  4892007 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 4891927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 29186480 - 29186560
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  29186480 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 29186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 33361610 - 33361530
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  33361610 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatttatgagctgatttagagatcatat 33361530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 18814912 - 18814859
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18814912 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 18814859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 34688280 - 34688227
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34688280 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 34688227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 41962310 - 41962362
Alignment:
Q  133 taaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaaga 185  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41962310 taaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaaga 41962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 10694135 - 10694206
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagaga 187  Q
    |||||||||||| || |||||||||||  ||||||||||||||||||||||| ||||| |||||||||||||    
T  10694135 ttcgaaagaaaagatgttaaaacgacgaaacattgtgattcatcataaaatacgtatgggctgattaagaga 10694206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 34692808 - 34692745
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  34692808 atactcatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtgaatataatcta 34692745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 50394967 - 50395082
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| || || |||           |||||||||| |||| |||||||||||| ||||| |||||||    
T  50394967 actagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaaaattcgaaagaagatatgttaaaacgacggaacattatgattca 50395066  T
Q  158 tcataaaatatgtatg 173  Q
    ||||||||||||||||    
T  50395067 tcataaaatatgtatg 50395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 31620382 - 31620329
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  31620382 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcactgagtga 31620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 39760073 - 39760138
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctg 178  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||||| ||||    
T  39760073 ttcttcgaaagaagatatgttaaaacgacggaatattgtgattcatcataaaatatgtatgggctg 39760138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 41829608 - 41829661
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  41829608 atacccatatttacatcaaatgaaatcaagcaaagaagtagcaccagtgagtga 41829661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 52521175 - 52521228
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  52521175 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 52521228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 18815115 - 18815056
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||| ||||||||| || |||||||||||| |||||||||||||||||||||||||||||    
T  18815115 tctttgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatg 18815056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 41962486 - 41962539
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  41962486 atacccatatttacatcaaatgaaatcaagtaaagaagtaacatcagtgagtga 41962539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 4891931 - 4891875
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  4891931 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 4891875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 17707301 - 17707377
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 270  Q
    ||||||||||  || ||||||| ||||||||| ||  |||||||||||||||||||||||||| |||| ||||||||    
T  17707301 tgattaagagtgcacataatcaatttatgagattatgaattgacataatatttaggatgaaaataatttgaaccaat 17707377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 29186556 - 29186612
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  29186556 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 29186612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 33361534 - 33361478
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  33361534 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 33361478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 43254612 - 43254668
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  43254612 tcgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 43254668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 50561971 - 50561911
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||||||||| |||| || ||||||||| || |||||||||||||||||||||||| ||||    
T  50561971 ttcttcgaaataaaagatgttaaaacgatggaacattgtgattcatcataaaatatatatg 50561911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 43254555 - 43254591
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43254555 actagttacaaacccgtgcttcgcacgggttcaataa 43254591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 4894009 - 4893967
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  4894009 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 4893967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 10763629 - 10763587
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  10763629 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 10763587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 29840690 - 29840732
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  29840690 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 29840732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 38896856 - 38896814
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  38896856 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 38896814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 42682633 - 42682591
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  42682633 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 42682591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 52037391 - 52037433
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||| |||||||    
T  52037391 actagttacaaacccgtgcttcgcacgggttgaattatgtatt 52037433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 3929748 - 3929789
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  3929748 actagttacaaacccgtgcttcgcacgggttgaataacgtat 3929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 28565430 - 28565471
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  28565430 actagttacaaacccgtgcttcgcacgggttgaataacgtat 28565471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 28631852 - 28631816
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  28631852 actagttacaaacccgtgcttcgcacgggttgaataa 28631816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47137900 - 47137864
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  47137900 actagttacaaacccgtgcttcgcacgggttgaataa 47137864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 58 - 425
Target Start/End: Original strand, 48526 - 48869
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||        || |||||||||| | ||||||||| |||   |||||||||||||    
T  48526 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttattcgaaagaagagatattaaaatgacataacattgtgattca 48624  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||                 ||||||| ||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  48625 tcataaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgagaatacaaactaacataatatttaggattaaaac 48707  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||             ||||| |||||||||||||||||||||| |    
T  48708 aattggaaccaataaagaaaccaatgatatgtgagtttacatattatccaaaattat-----aaaaaagagtgtt-ttgttatagagttaccaaaaaaag 48801  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtgagtattatcta 425  Q
    ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  48802 atttatactcatatttacatcaaaagaaatcaagcaaagaagtagcatcggtgagtgaatataatcta 48869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 440 - 656
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  440 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaat 539  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||  ||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  540 ttacatattatgtaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagca 634  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||| ||||||||    
T  635 aagaagtagcatctgtgagtga 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 330 - 456
Alignment:
Q  66 caaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaa 165  Q
    |||||||||||||| |||  |||||||||||||||||||        | ||||||||||| | || |||| |||| || | |||||||||||||||||||    
T  330 caaacccgtgcttcacacgagttcaataatgtattcgataaaaaaaat-cttcgaaagaagagatgttaacacgatggaatattgtgattcatcataaaa 428  T
Q  166 tatgtatgagctgattaagagagcatat 193  Q
    |||||||| |||||||||||||||||||    
T  429 tatgtatgggctgattaagagagcatat 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 11500711 - 11500495
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||| ||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  11500711 tgattaacagagcatataatcagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaaggaactaatgatgtgtgaat 11500612  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    |||||||||||||||||||||             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11500611 ttacatattatccaaaattat-----aaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagca 11500517  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||    
T  11500516 aagaagtagcatcggtgagtga 11500495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 33031773 - 33031494
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||| ||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||                 ||||    
T  33031773 ttctttgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctgattaagagagcat-----------------ataa 33031691  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| |   |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33031690 tcagtttatgagattcagaattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaatt 33031591  T
Q  313 atnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 412  Q
    ||             ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  33031590 at------aaaaaaagtgttattgttatagagttaccaaaaaatgattgatacccatattgacatcaaatgaaatcaagcaaataagtagcatcggtgag 33031497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 42688470 - 42688190
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || |||||||||||| ||||||||||||||| ||||||||||||| ||                 || |||||||| |||||||    
T  42688470 ttcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcgtaaaatatgtatgggc-----------------tgtttaagagaacatataa 42688388  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaatt 312  Q
    ||||||||||||| ||  ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  42688387 tcagtttatgagattaggaattgacataatatttatgatgaaaacaatttgaaccaataaaggaaccaatgatgtgtgaatttacatattattcaaaatt 42688288  T
Q  313 atnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 412  Q
    ||             |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42688287 at-----aaaaaagggtgttgttgttatagagttaccaaaaaatgattgatacacatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgag 42688193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 17470702 - 17470367
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||| |||||||||||||||||||  |||||||||| |||||||||         | || ||||||| | || ||||||||| |  |||||||||||||    
T  17470702 actagctacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaaatatttgaaagaagagatgttaaaacgatgaaacattgtgattca 17470603  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||||                 ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  17470602 tcataaaatatgtatgtgctgattaagagagcat-----------------ataatcagtttatgagattagaaattgacataatatttaggatgaaaac 17470520  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             ||||||||||||| ||||||  |||||| |    
T  17470519 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttattgagttattaaaaaatg 17470425  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| |||| |||||||||||| |||||||||| ||| |||||||||    
T  17470424 attgatacccatattcacataaaatgaaatcaaacaaagaagtaacattggtgagtga 17470367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 17582512 - 17582847
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||| |||||||||||||||||||  |||||||||| |||||||||         | || ||||||| | || ||||||||| |  |||||||||||||    
T  17582512 actagctacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaaatatttgaaagaagagatgttaaaacgatgaaacattgtgattca 17582611  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||||||||||                 |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  17582612 tcataaaatatgtatgtgctgattaagagag-----------------catataatcagtttatgagattagaaattgacataatatttaggatgaaaac 17582694  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||             ||||||||||||| ||||||  |||||| |    
T  17582695 aattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttgttgttattgagttattaaaaaatg 17582789  T
Q  358 attgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||| |||| |||||||||||| |||||||||| ||| |||||||||    
T  17582790 attgatacccatattcacataaaatgaaatcaaacaaagaagtaacattggtgagtga 17582847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 415
Target Start/End: Complemental strand, 17478753 - 17478549
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 305  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17478753 catataatcagtttattagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17478654  T
Q  306 caaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    ||||||| |              ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  17478653 caaaattgtaaaaaagaa-----tgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcat 17478559  T
Q  406 cggtgagtga 415  Q
    || |||||||    
T  17478558 cgatgagtga 17478549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 415
Target Start/End: Complemental strand, 17483188 - 17482984
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 305  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17483188 catataatcagtttattagattaggaattgacataatatttaggataaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17483089  T
Q  306 caaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    |||||||||              ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  17483088 caaaattataaaaaagaa-----tgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcat 17482994  T
Q  406 cggtgagtga 415  Q
    || |||||||    
T  17482993 cgatgagtga 17482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 415
Target Start/End: Original strand, 17570026 - 17570230
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 305  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17570026 catataatcagtttattagattaggaattgacataatatttaggataaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17570125  T
Q  306 caaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    |||||||||              ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  17570126 caaaattataaaaaagaa-----tgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcat 17570220  T
Q  406 cggtgagtga 415  Q
    || |||||||    
T  17570221 cgatgagtga 17570230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 415
Target Start/End: Original strand, 17574461 - 17574665
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 305  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17574461 catataatcagtttattagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17574560  T
Q  306 caaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 405  Q
    ||||||| |              ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  17574561 caaaattgtaaaaaagaa-----tgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcat 17574655  T
Q  406 cggtgagtga 415  Q
    || |||||||    
T  17574656 cgatgagtga 17574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 27734456 - 27734676
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  27734456 tgatttagagatcatataatcagtttatgagattaggaattgacataataattaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaat 27734554  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     ||||||||||||||||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27734555 tatgattacatattatccaaaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatc 27734649  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    || ||||||||||||||||||||||||    
T  27734650 aaacaaagaagtagcatcggtgagtga 27734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 47175435 - 47175098
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| |||| |||||||||||| |||||||||| |||||||||        ||||||||||||| | || |||||| || || |||||||||||||    
T  47175435 actagttataaactcgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaagagatgttaaaatgatggaacattgtgattca 47175337  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| | ||||||||||||||                 |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  47175336 tcataaaatatgtatgggttgattaagagagca-----------------tataatcagtttatgagattatgaattgacataatatttaggatgaaaac 47175254  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||             || |||||||  | |||||||||||    
T  47175253 aattggaaccaataaagaaaccaatgatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagttttgttgt--tggagttaccaaa 47175161  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  47175160 aaaggatagatactcgtatttacatcagatgaaatcaagcaaagaagtagcatcgatgagtga 47175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 116 - 415
Target Start/End: Original strand, 23299069 - 23299350
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatca 215  Q
    |||||||||||| || |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||                 |||||||    
T  23299069 ttcgaaagaaaagatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctgattaagagatcat-----------------ataatca 23299151  T
Q  216 gtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaa 310  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||     ||||||||||||||||    
T  23299152 gtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaatcaatgatatgtgaattatgattacatattatccaaaa 23299250  T
Q  311 ttatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtg 410  Q
    ||||             ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  23299251 ttataaaaaaga-----gtgttcttgttgtagagttaccaaaaaaggattgatacccatatttacatcacatgaaatcaagtaaagaagtagcatcggtg 23299345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 194 - 415
Target Start/End: Complemental strand, 9150181 - 9149960
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaatt-ggaaccaataaagaaaccaatgatgtgtgaa 292  Q
    ||||| ||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||   |||||||| |||| |||||||||||||||||    
T  9150181 tgatttagagatcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaaaaaggaaccaa-aaaggaaccaatgatgtgtgaa 9150083  T
Q  293 tt-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaat 387  Q
    ||     ||||||||||||||||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9150082 ttatgattacatattatccaaaattataaaaaaga-----gtgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaat 9149988  T
Q  388 caagcaaagaagtagcatcggtgagtga 415  Q
    ||| ||||||||||||||||||||||||    
T  9149987 caaacaaagaagtagcatcggtgagtga 9149960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 113 - 415
Target Start/End: Complemental strand, 42918784 - 42918499
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||| | || |||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||                 ||||    
T  42918784 ttcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtaccggctgattaagagagcat-----------------ataa 42918702  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatcca 307  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||     |||| ||||||||    
T  42918701 tcagtttatgagattaggaattgacataatatttaggatgaaaacaattgaaaccaa-aaaggaaccaatgatgtgagaattatgattacacattatcca 42918603  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||| |||||||||||    
T  42918602 aaattataaaaaaaga----gtgttgttgttatagagttaccaaaaaaagattgatactcatatttacatcagatgaaatcaagaaaaaaagtagcatcg 42918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 58 - 314
Target Start/End: Original strand, 8925226 - 8925464
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||||||    
T  8925226 actagttacaaacccgtgctccgcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtgattca 8925324  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||| |||||||||||                 |||||||||||||| | ||  |||||||||||||||||||||||||||    
T  8925325 tcataaaatatgtatgggctgatcaagagagcata-----------------taatcagtttatgatattaggaattgacataatatttaggatgaaaac 8925407  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
     |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  8925408 tattggaaccaataaaggaatcaatgatgtatgaatttacatattatccaaaattat 8925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 113 - 415
Target Start/End: Original strand, 33638017 - 33638301
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| | |||                 ||    
T  33638017 ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcttat-----------------aa 33638099  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||    
T  33638100 tcagtttattagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatcca 33638198  T
Q  308 aaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcg 407  Q
    |||||||             |||| |||||| |||||||| |||||||||||||||| || ||||||||||| ||||||| ||||||||||||| |||||    
T  33638199 aaattat-----aaaaaagagtgtcgttgttgtagagttagcaaaaaaggattgatatccgtatttacatcagatgaaattaagcaaagaagtaacatcg 33638293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 133 - 371
Target Start/End: Complemental strand, 5963581 - 5963364
Alignment:
Q  133 taaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaa 232  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||                 ||||||| ||||||||| ||  ||    
T  5963581 taaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcat-----------------ataatcaatttatgagattaggaa 5963499  T
Q  233 ttgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgtt 332  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||             |||||    
T  5963498 ttgacataatatttaggatgaaaacaattagaaccaataaaggaaccaatgaagtgtgaatttacatattatccaaaattat-----aaaaaagagtgtt 5963404  T
Q  333 gttgttatagagttacc-aaaaaaggattgatacccatat 371  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  5963403 gttgttatagagttaccaaaaaaatgattgatacccatat 5963364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 42826647 - 42826984
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||            ||||||||| | || |||||||||||| |||||||||||||    
T  42826647 actagttacaaacccgtgcttcgcaagggttcaataatgtattcgataaaaaaaaaa--tcgaaagaagagatgttaaaacgacggaacattgtgattca 42826744  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||  |||||||||                 |||| | | |||  | ||||||||| || |||||||||||||||||||||| ||||     
T  42826745 tcataaaatatgtataggctgattaa-----------------gagagcgtgtaa--aatttatgagattagaaattgacataatatttaggataaaaat 42826825  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    ||||||||||||||||| || ||||||||||||||||     |||| ||||| |||||||||             |||||||||||||||||||||||||    
T  42826826 aattggaaccaataaaggaaacaatgatgtgtgaattatgattacacattattcaaaattataaaaaaaga----gtgttgttgttatagagttaccaaa 42826921  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||| |||||||||||||||||| |  | |||||||||||||||||||||||||| ||||||||    
T  42826922 aaaagattgatacccatatttaaaatagatgaaatcaagcaaagaagtagcatcagtgagtga 42826984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 415
Target Start/End: Complemental strand, 19522106 - 19521785
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||| || ||| ||||| |||| |||||||||| |||||||||        || |||||||||| | || |||||||||||| |||||||||||||    
T  19522106 actagttataagcccatgctttgcacgggttcaataacgtattcgataaaaaaa-ttattcgaaagaagagatgttaaaacgacggaacattgtgattca 19522008  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| |||||||||||||||                 |||||| |||||||||||| ||  ||||||||||||||||||| |||||||    
T  19522007 tcataaaatatgtatgggctgattaagagagc-----------------atataaccagtttatgagattatgaattgacataatatttaggttgaaaac 19521925  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttacc-aaaaaag 356  Q
    ||||||            |||||||||||||||||||||||||||||||||||||||             ||||| |||||||||||||||| ||||||     
T  19521924 aattgg------------aaccaatgatgtgtgaatttacatattatccaaaattat-----aaaaaagagtgttattgttatagagttaccaaaaaaat 19521842  T
Q  357 gattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||| |  || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19521841 gattgaaa--cacatttacatcaaatgaaatcaagcaaagaagtagcatctgtgagtga 19521785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 23765885 - 23765993
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 305  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||||||||||||||||    
T  23765885 catataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaatgaatcaatgatgtgtgaatttacatattatc 23765984  T
Q  306 caaaattat 314  Q
     ||||||||    
T  23765985 gaaaattat 23765993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 14309815 - 14309563
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||| || ||||||||||||| |||||||| | |||||||||        |  || ||||||| | || |||||||||||| |||| ||||||||    
T  14309815 actagttacgaatccgtgcttcgcacgggttcaatgacgtattcgataaaaaaaatattt-gaaagaagagatgttaaaacgacggaacatcgtgattca 14309717  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    ||||| ||||||||||||||||||||||||||                 ||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  14309716 tcatagaatatgtatgagctgattaagagagc-----------------atataatcagtttatgagattaggaattgacataatatttaggatgaaaac 14309634  T
Q  258 --------------aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat 314  Q
                  ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  14309633 tattggaaccaataaattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattat 14309563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 310
Target Start/End: Complemental strand, 4849017 - 4848834
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||                 |||    
T  4849017 tcttcgaaagaaaagatcttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatat-----------------aat 4848935  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaa 308  Q
    |||||||||||| ||  |||||||||||| |||| | ||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||    
T  4848934 cagtttatgagattaggaattgacataatgtttaagttgaaaacaattggaaccaaaaaag-aaccaatgatgtgtgaattatgattacatattatccaa 4848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 49145635 - 49145819
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||  |||||| ||||| ||||                 |||    
T  49145635 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatggactgatttagagatcata-----------------taa 49145717  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcca 307  Q
    |||||||||  || ||  ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||     ||||||||||||||    
T  49145718 tcagtttatttgattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatatgtgaattatgattacatattatcca 49145816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 48528137 - 48528273
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||                 ||||| ||||| |||||||    
T  48528137 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagc-----------------tgatttagagatcatataa 48528219  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaac 266  Q
    ||||||||||||| ||  |||||||||||| |||||||||||||||||||||||    
T  48528220 tcagtttatgagattaggaattgacataatttttaggatgaaaacaattggaac 48528273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 17170933 - 17170853
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17170933 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 17170853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 270
Target Start/End: Original strand, 39649328 - 39649467
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataat 213  Q
    |||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||                 ||||| ||||| ||||||||    
T  39649328 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagc-----------------tgatttagagatcatataat 39649410  T
Q  214 cagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 270  Q
    |||||||||||| ||  |||||||||||||||||||||||||| ||||| |||||||    
T  39649411 cagtttatgagattaggaattgacataatatttaggatgaaaataattgaaaccaat 39649467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 31898168 - 31898304
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataa 212  Q
    ||||||||||||||  || ||||||| |||| ||||||||||||||||||||||||||||||||                 ||||| ||||| |||||||    
T  31898168 ttcttcgaaagaaaggatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagc-----------------tgatttagagatcatataa 31898250  T
Q  213 tcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaac 266  Q
    ||||||||||||| ||  |||||||||||| |||||||||||||||||||||||    
T  31898251 tcagtttatgagattaggaattgacataatttttaggatgaaaacaattggaac 31898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 8925484 - 8925537
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8925484 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 8925537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 23766013 - 23766066
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23766013 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 23766066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 14309543 - 14309490
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  14309543 atacccatatttacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 14309490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 17170857 - 17170801
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  17170857 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 17170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 6911419 - 6911475
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||    
T  6911419 tcgaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 6911475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 9150245 - 9150185
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||||||||| || |  |||||| || |||||||||||||||||||||||||||||    
T  9150245 ttcttcgaaagaaaagatgtataaacgaaggaacattgtgattcatcataaaatatgtatg 9150185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 47573397 - 47573453
Alignment:
Q  117 tcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||    
T  47573397 tcgaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 47573453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 6911358 - 6911395
Alignment:
Q  57 cactagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  6911358 cactagttacaaacccgtgcttcgcacgggttcaataa 6911395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 11500767 - 11500718
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataa 163  Q
    |||||||||||| | || |||||||||||| |||||||||||||||||||    
T  11500767 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataa 11500718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 27734394 - 27734452
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||||||||| || |||||||||||| ||||||  |||||| ||||||||||||||    
T  27734394 ttcttcgaaagaaaagatgttaaaacgacggaacattg--attcattataaaatatgtatg 27734452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 42996982 - 42996946
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    ||||||||||||||||||||||||||||||| |||||    
T  42996982 actagttacaaacccgtgcttcgcacaggttgaataa 42996946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 47573333 - 47573369
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  47573333 actagttacaaacccgtgcttcgcacgggttcaataa 47573369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 691330 - 691288
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  691330 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 691288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 15595466 - 15595424
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| |||||| ||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaataatatatt 15595424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 21669232 - 21669274
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  21669232 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 21669274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 27732953 - 27732995
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  27732953 actagttacaaacccgtgcttcgcactggttgaataacgtatt 27732995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 31896814 - 31896856
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  31896814 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 31896856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 39278279 - 39278237
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  39278279 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 39278237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 39647982 - 39648024
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  39647982 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 39648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 12960648 - 12960607
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  12960648 actagttacaaacccgtgcttcgcacgggttgaataacgtat 12960607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 9151458 - 9151418
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaataacgtatt 9151418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 9226021 - 9226057
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  9226021 actagttacaaacccgtgcttcgcacgggttgaataa 9226057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 17817760 - 17817724
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  17817760 actagttacaaacccgtgcttcgcacgggttgaataa 17817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 23762345 - 23762393
Alignment:
Q  56 acactagttacaaacccgtgcttcgcacaggttcaataatgtattcgat 104  Q
    |||||||||||||||  |||||||||||  ||||||||| |||||||||    
T  23762345 acactagttacaaacttgtgcttcgcacgagttcaataacgtattcgat 23762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 38434278 - 38434314
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  38434278 actagttacaaacccgtgcttcgcacgggttgaataa 38434314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 58 - 411
Target Start/End: Original strand, 14619 - 14957
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||        |||||  |||||| | || |||||| || || |||||||||||||    
T  14619 actagttacaaacccgtgcttcgtacgggttcaataacgtattcgataaaaaaa-ttctttaaaagaagagatgttaaaatgatggaacattgtgattca 14717  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||||||||||                 ||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  14718 tcataaaatatgtatgagctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaac 14800  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat---nnnnnnnnnnnnngtgttgttgttatagagttaccaaaaa 354  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||                |||||||||||||||||||||||||||    
T  14801 aattggaaccaataaaggaaccaatgatctgtgaatttacgtattatccaaaattataaaaaaaaaaaaaagagtgttgttgttatagagttaccaaaaa 14900  T
Q  355 aggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtga 411  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  14901 atgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagaattggtga 14957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 60 - 415
Target Start/End: Complemental strand, 101680 - 101342
Alignment:
Q  60 tagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatc 159  Q
    |||||||||||||||||||||||| ||||||||||||||||||||         |||||||||||| | || |||||||||| | |||||||||||||||    
T  101680 tagttacaaacccgtgcttcgcacgggttcaataatgtattcgataaaaaaaaatcttcgaaagaagagatgttaaaacgacagaacattgtgattcatc 101581  T
Q  160 ataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaa 259  Q
    ||||||||||||||||||||||||||||||||                 ||||| ||||||||||| ||  ||||||||||||||||| |||||||||||    
T  101580 ataaaatatgtatgagctgattaagagagcat-----------------ataattagtttatgagattaggaattgacataatatttatgatgaaaacaa 101498  T
Q  260 ttggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaa 354  Q
    ||||||||||||||| || |||| ||||||||||     |||||||||||||||||||||             | ||| |||||||||||||||||||||    
T  101497 ttggaaccaataaaggaaacaataatgtgtgaattatgattacatattatccaaaattat-----aaaaaagagcgtttttgttatagagttaccaaaaa 101403  T
Q  355 aggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||| | ||||||||    
T  101402 aggattgatacccatatttaaaacagatgaaatcaagcaaagaagtagcaccagtgagtga 101342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 126; Significance: 8e-65; HSPs: 4)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 25767 - 25983
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  25767 tgattaagagagcatataatcagtttatgagattatgaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 25866  T
Q  294 ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 393  Q
    ||||||||||||||||||| |             || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25867 ttacatattatccaaaattct-----aaaaaagagttttgttgtaatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagca 25961  T
Q  394 aagaagtagcatcggtgagtga 415  Q
    |||||||| ||||  |||||||    
T  25962 aagaagtaacatcactgagtga 25983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 25722 - 25783
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25722 ttaaaacgatggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatat 25783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 25614 - 25660
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgat 104  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  25614 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 25660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 25683 - 25715
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaa 226  Q
    ||||||||||| |||||||||||||||||||||    
T  25683 tgattaagagagcatataatcagtttatgagaa 25715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 58 - 415
Target Start/End: Original strand, 12214 - 12552
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||        ||||||||||||||| || |||||||||||| |||||||||||||    
T  12214 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaa-ttcttcgaaagaaaagatgttaaaacgacggaacattgtgattca 12312  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||||| ||||||| ||||| |||||                 ||||||||||||||| ||  ||||||||||||||||||||| |||||    
T  12313 tcataaaatatgtatgggctgatttagagatcatat-----------------aatcagtttatgagattatgaattgacataatatttaggataaaaac 12395  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaa 352  Q
    |||| ||||||| || | |||||||||||||||||||     ||||||||||||||||||||             ||||||||||| |||||||| ||||    
T  12396 aattagaaccaa-aagggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaaga-----gtgttgttgttgtagagttagcaaa 12489  T
Q  353 aaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  12490 aaaggattgatacccatatttacatcagatgaaaccaagcaaagaagtagcatcggtgagtga 12552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 4371 - 4588
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  4371 tgatttagagatcatataatcagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaat 4469  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     ||||||||||||||||||||             ||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4470 tatgattacatattatccaaaattataaaaaaga-----gtgttgttgt---agagttaccaaaaaaggattgatacccatatttacatcagatgaaatc 4561  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||    
T  4562 aagcaaagaagtagcatcggtgagtga 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 194 - 415
Target Start/End: Original strand, 10820 - 11037
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  10820 tgatttagagatcatataatcagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaat 10918  T
Q  294 t-----tacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatc 388  Q
    |     ||||||||||||||||||||             ||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10919 tatgattacatattatccaaaattataaaaaaga-----gtgttgttgt---agagttaccaaaaaaggattgatacccatatttacatcagatgaaatc 11010  T
Q  389 aagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||    
T  11011 aagcaaagaagtagcatcggtgagtga 11037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 4308 - 4367
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||||||   || |||||||||||| ||||||||||||||||||| || ||||||    
T  4308 tcttcgaaagaaccgatgttaaaacgacggaacattgtgattcatcataacatttgtatg 4367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 10757 - 10816
Alignment:
Q  114 tcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||||||   || |||||||||||| ||||||||||||||||||| || ||||||    
T  10757 tcttcgaaagaaccgatgttaaaacgacggaacattgtgattcatcataacatttgtatg 10816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 177237 - 177091
Alignment:
Q  264 aaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgat 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||    
T  177237 aaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaaga-----gtgttgttgttatagagttaccaaaaaaggattgat 177143  T
Q  364 acccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  177142 acccatatttacattaaatgaaatcaagcaaagaagtagcatcggtgagtga 177091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 196 - 415
Target Start/End: Complemental strand, 120755 - 120537
Alignment:
Q  196 attaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-- 293  Q
    ||||||||| |||||||||||||||||||| ||  |||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||      
T  120755 attaagagagcatataatcagtttatgagattatgaattgatataatatttaagatg-aaacaattggaaccaataaaggaaccaatgatgtgagaatta 120657  T
Q  294 ---ttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaa 390  Q
       |||||||||||||||||||||             || ||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  120656 tgattacatattatccaaaattat-----aaaaaagagttttgttgttagagagttaccaaaaaaggattgatacttatatttacatcagatgaaatcaa 120562  T
Q  391 gcaaagaagtagcatcggtgagtga 415  Q
    |||||| |||||||||| |||||||    
T  120561 gcaaaggagtagcatcgatgagtga 120537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 120802 - 120761
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  120802 ttaaaacgatggaacattgtgattcatcataaaatatgtatg 120761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 58 - 385
Target Start/End: Original strand, 29639 - 29939
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtgattca 157  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||        | ||||||||||| | || |||||||||||| ||||||||||||     
T  29639 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaat-cttcgaaagaagagatgttaaaacgacggaacattgtgattcc 29737  T
Q  158 tcataaaatatgtatgagctgattaagagagcatattgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaac 257  Q
    |||||||||||||| | ||||||                 ||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||     
T  29738 tcataaaatatgtacgggctgat-----------------taagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaat 29820  T
Q  258 aattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaagg 357  Q
    |||||||||||| |||| || ||||||||| |||||||||| |||||||||||||||                 ||||||||||||||||||||||||||    
T  29821 aattggaaccaa-aaaggaaacaatgatgtatgaatttacacattatccaaaattataaaagaaag--------tgttgttatagagttaccaaaaaagg 29911  T
Q  358 attgatacccatatttacatcaaatgaa 385  Q
    |||||||||||||||||||||| |||||    
T  29912 attgatacccatatttacatcagatgaa 29939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1891 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 253 - 133
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  253 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 154  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  153 ttacatattatccaaaattat 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1891; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 317 - 237
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||| ||||||| | || |||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  317 ttctttgaaagaagagatgttaaaatgacggaactttgtgattcatcataaaatatatatgagctgattaagagagcatat 237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 5323 - 5203
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  5323 tgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 5224  T
Q  294 ttacatattatccaaaattat 314  Q
    |||||||||||||||||||||    
T  5223 ttacatattatccaaaattat 5203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 5183 - 5130
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5183 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 5387 - 5307
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||| ||||||| | || ||||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  5387 ttctttgaaagaagagatgttaaaacaacggaacattgtaattcattataaaatatgtatgagctgattaagagagcatat 5307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 206 - 415
Target Start/End: Original strand, 10151 - 10358
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacata 300  Q
    |||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||    
T  10151 catataatcattttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacata 10249  T
Q  301 ttatccaaaattatnnnnnnnnnnnnngtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagt 400  Q
    ||||||||||||||             ||||||||||| ||||||||||||||||||||||||| |||||||||||| | |||||||||| |||||||||    
T  10250 ttatccaaaattat-----aaaaaagagtgttgttgttgtagagttaccaaaaaaggattgata-ccatatttacataagatgaaatcaaacaaagaagt 10343  T
Q  401 agcatcggtgagtga 415  Q
    | |||| ||||||||    
T  10344 atcatcagtgagtga 10358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 10078 - 10135
Alignment:
Q  116 ttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    |||||||||||  || |||||||||||| |||||||||||||||||||||||||||||    
T  10078 ttcgaaagaaaggatgttaaaacgacggaacattgtgattcatcataaaatatgtatg 10135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 6e-44; HSPs: 5)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 10753 - 10635
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 293  Q
    ||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  10753 tgattaagagagcatataatcagtttatgagattatgaattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaat 10654  T
Q  294 ttacatattatccaaaatt 312  Q
    |||||||||||||||||||    
T  10653 ttacatattatccaaaatt 10635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 10613 - 10560
Alignment:
Q  362 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  10613 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcactgagtga 10560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 10906 - 10860
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtattcgat 104  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  10906 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 10798 - 10757
Alignment:
Q  132 ttaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  10798 ttaaaacgatggaacattgtgattcatcataaaatatgtatg 10757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 10837 - 10805
Alignment:
Q  194 tgattaagagaccatataatcagtttatgagaa 226  Q
    ||||||||||| |||||||||||||||||||||    
T  10837 tgattaagagagcatataatcagtttatgagaa 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 17124 - 16986
Alignment:
Q  58 actagttacaaacccgtgcttcgca----caggttcaataatgtattcgatnnnnnnnnttcttcgaaagaaaatatattaaaacgacgggacattgtga 153  Q
    |||||||||||||||||||||||||    | |||||||||| |||||||||        ||||| ||||||| | || |||||||||||| |||||||||    
T  17124 actagttacaaacccgtgcttcgcaagcacgggttcaataacgtattcgataaaaaaa-ttctttgaaagaagagatgttaaaacgacggaacattgtga 17026  T
Q  154 ttcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17025 ttcatcataaaatatgtatgagctgattaagagagcatat 16986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 656 - 579
Alignment:
Q  340 tagagttaccaaaaaaggattgata--cccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 415  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  656 tagagttacgaaaaaaggattgatatacccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 3259 - 3142
Alignment:
Q  200 agagaccatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----t 294  Q
    ||||| |||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||     |    
T  3259 agagatcatataatcagtttatga-attaggaattgacataatatttaggatgaaaacaattggaaccaa-aaaggaacgaatgttgtgtgaattatgat 3162  T
Q  295 tacatattatccaaaattat 314  Q
    ||||||||||||||||||||    
T  3161 tacatattatccaaaattat 3142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 3329 - 3269
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatg 173  Q
    ||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||    
T  3329 ttcttcgaaagaaaggatgttaaaacgacggaacattgtgattcatcataaaatatgtatg 3269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 18760 - 18840
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  18760 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 18840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 18836 - 18892
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  18836 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 18892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 17401 - 17443
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  17401 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 17443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 13640 - 13560
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaagagagcatat 193  Q
    ||||||||| ||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  13640 ttcttcgaaggaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatat 13560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 13564 - 13508
Alignment:
Q  206 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 262  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  13564 catataatcagtttatgagattaggaattgacataatttttaggatgaaaacaattg 13508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 14689 - 14647
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtatt 100  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  14689 actagttacaaacccgtgcttcgcacgggttgaataacgtatt 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 231880 - 231809
Alignment:
Q  113 ttcttcgaaagaaaatatattaaaacgacgggacattgtgattcatcataaaatatgtatgagctgattaag 184  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  231880 ttcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgactaag 231809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 143214 - 143255
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  143214 actagttacaaacccgtgcttcgcacaggttgaataacgtat 143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 24919 - 24960
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  24919 actagttacaaacccgtgcttcgcacgggttgaataacgtat 24960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 13064 - 13023
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataatgtat 99  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  13064 actagttacaaacccgtgcttcgcacgggttgaataacgtat 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 8176 - 8212
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  8176 actagttacaaacccgtgcttcgcacgggttgaataa 8212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 10835 - 10799
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| | ||||||||    
T  10835 actagttacaaacccgtgcttcgcacggattcaataa 10799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 52693 - 52729
Alignment:
Q  58 actagttacaaacccgtgcttcgcacaggttcaataa 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  52693 actagttacaaacccgtgcttcgcacgggttgaataa 52729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University