View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9427_low_52 (Length: 238)

Name: NF9427_low_52
Description: NF9427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9427_low_52
NF9427_low_52
[»] chr4 (50 HSPs)
chr4 (20-215)||(30415862-30416057)
chr4 (97-223)||(6279918-6280044)
chr4 (99-223)||(39730292-39730416)
chr4 (99-223)||(55967999-55968123)
chr4 (97-212)||(23686750-23686865)
chr4 (100-223)||(34049597-34049720)
chr4 (100-223)||(48518891-48519014)
chr4 (99-209)||(45747795-45747905)
chr4 (99-208)||(27555377-27555486)
chr4 (94-223)||(27762893-27763022)
chr4 (99-223)||(936078-936202)
chr4 (99-198)||(9327244-9327344)
chr4 (99-198)||(9374003-9374103)
chr4 (99-223)||(43723216-43723340)
chr4 (96-223)||(40435852-40435979)
chr4 (97-223)||(48879277-48879403)
chr4 (100-209)||(32953489-32953598)
chr4 (99-223)||(25932393-25932517)
chr4 (99-223)||(39498777-39498901)
chr4 (99-223)||(39502116-39502240)
chr4 (100-223)||(13229989-13230112)
chr4 (99-222)||(18405233-18405356)
chr4 (96-223)||(35999638-35999765)
chr4 (102-223)||(18931705-18931826)
chr4 (105-213)||(10400810-10400918)
chr4 (99-223)||(41859046-41859170)
chr4 (112-223)||(8322197-8322308)
chr4 (95-209)||(50672903-50673014)
chr4 (97-223)||(39835304-39835430)
chr4 (99-209)||(42773914-42774024)
chr4 (101-223)||(47670314-47670436)
chr4 (97-209)||(25916032-25916142)
chr4 (115-198)||(9382297-9382381)
chr4 (101-195)||(7258943-7259036)
chr4 (104-223)||(27942689-27942814)
chr4 (101-209)||(38414173-38414278)
chr4 (96-223)||(41744216-41744344)
chr4 (99-223)||(45596220-45596344)
chr4 (90-223)||(36858368-36858499)
chr4 (101-187)||(36860106-36860191)
chr4 (99-196)||(26165343-26165440)
chr4 (142-196)||(12275953-12276007)
chr4 (106-196)||(44309739-44309829)
chr4 (118-195)||(47426258-47426336)
chr4 (100-209)||(18405719-18405828)
chr4 (139-223)||(22654516-22654600)
chr4 (104-160)||(34237424-34237480)
chr4 (120-195)||(52469678-52469753)
chr4 (157-223)||(34238011-34238077)
chr4 (103-208)||(24805088-24805193)
[»] chr2 (49 HSPs)
chr2 (91-223)||(27357954-27358086)
chr2 (104-223)||(14832758-14832877)
chr2 (91-223)||(45409198-45409330)
chr2 (97-223)||(6171739-6171865)
chr2 (96-209)||(6571649-6571762)
chr2 (99-223)||(34356699-34356823)
chr2 (99-209)||(17965945-17966055)
chr2 (93-209)||(37533914-37534030)
chr2 (104-223)||(28311701-28311820)
chr2 (104-223)||(37233377-37233496)
chr2 (97-223)||(346342-346468)
chr2 (97-223)||(2050814-2050940)
chr2 (97-223)||(2521623-2521749)
chr2 (97-223)||(11071553-11071679)
chr2 (99-209)||(21737399-21737509)
chr2 (103-216)||(18713660-18713773)
chr2 (99-223)||(4559507-4559631)
chr2 (96-223)||(14777494-14777621)
chr2 (96-223)||(25454972-25455099)
chr2 (97-196)||(39995128-39995227)
chr2 (98-223)||(5770108-5770233)
chr2 (90-223)||(20426473-20426606)
chr2 (102-214)||(24499399-24499509)
chr2 (94-223)||(42674655-42674784)
chr2 (100-222)||(9733846-9733968)
chr2 (101-223)||(41750477-41750599)
chr2 (102-223)||(37192470-37192591)
chr2 (99-222)||(40950858-40950981)
chr2 (115-209)||(14253484-14253578)
chr2 (104-209)||(638555-638660)
chr2 (106-223)||(3902404-3902521)
chr2 (99-223)||(41729129-41729253)
chr2 (100-223)||(1988259-1988382)
chr2 (102-212)||(11763374-11763483)
chr2 (99-208)||(45694151-45694260)
chr2 (98-209)||(14403231-14403342)
chr2 (96-210)||(39819657-39819771)
chr2 (96-223)||(40569968-40570095)
chr2 (99-209)||(5002836-5002945)
chr2 (105-223)||(26310215-26310335)
chr2 (98-218)||(1623336-1623455)
chr2 (102-197)||(1723230-1723325)
chr2 (99-193)||(7007551-7007645)
chr2 (137-223)||(25625334-25625420)
chr2 (139-195)||(4685155-4685211)
chr2 (169-223)||(23944111-23944165)
chr2 (90-195)||(4875751-4875856)
chr2 (160-209)||(13539630-13539679)
chr2 (97-177)||(13760939-13761019)
[»] chr1 (57 HSPs)
chr1 (95-223)||(5518499-5518627)
chr1 (97-198)||(29091640-29091741)
chr1 (99-223)||(52630722-52630846)
chr1 (100-223)||(1007696-1007819)
chr1 (97-223)||(48916019-48916145)
chr1 (99-223)||(2430445-2430569)
chr1 (95-223)||(3572560-3572688)
chr1 (99-223)||(39329557-39329681)
chr1 (103-209)||(36361745-36361851)
chr1 (97-223)||(46666657-46666783)
chr1 (97-223)||(47037406-47037532)
chr1 (103-196)||(52186049-52186142)
chr1 (97-223)||(2632801-2632927)
chr1 (97-223)||(9831867-9831993)
chr1 (99-223)||(1597341-1597465)
chr1 (99-223)||(9115786-9115910)
chr1 (100-223)||(14788672-14788795)
chr1 (100-223)||(20260086-20260209)
chr1 (100-223)||(39930406-39930529)
chr1 (101-223)||(25789712-25789834)
chr1 (96-209)||(6911456-6911569)
chr1 (99-196)||(6978746-6978843)
chr1 (98-223)||(12190175-12190300)
chr1 (106-223)||(13653800-13653917)
chr1 (98-223)||(35187405-35187530)
chr1 (97-209)||(4683371-4683483)
chr1 (99-223)||(8331963-8332087)
chr1 (100-222)||(17475321-17475443)
chr1 (101-222)||(20504990-20505111)
chr1 (99-192)||(49822916-49823009)
chr1 (94-223)||(5806285-5806410)
chr1 (106-196)||(30240985-30241075)
chr1 (109-223)||(37436630-37436744)
chr1 (102-195)||(32824899-32824992)
chr1 (98-223)||(38964677-38964802)
chr1 (101-209)||(13931885-13931993)
chr1 (103-223)||(51445083-51445202)
chr1 (144-223)||(13521270-13521349)
chr1 (106-208)||(9011167-9011268)
chr1 (99-209)||(19083104-19083214)
chr1 (99-209)||(19130992-19131102)
chr1 (96-162)||(32202327-32202393)
chr1 (99-208)||(52699465-52699574)
chr1 (101-208)||(24116338-24116443)
chr1 (103-198)||(31806759-31806852)
chr1 (97-209)||(50190762-50190874)
chr1 (107-209)||(11014448-11014550)
chr1 (99-209)||(47677606-47677715)
chr1 (101-223)||(37336453-37336567)
chr1 (139-223)||(13440344-13440428)
chr1 (97-209)||(38519059-38519171)
chr1 (100-215)||(16257008-16257123)
chr1 (100-209)||(1227879-1227987)
chr1 (158-223)||(46960576-46960641)
chr1 (101-196)||(37261823-37261918)
chr1 (139-212)||(3939500-3939573)
chr1 (98-127)||(19094158-19094187)
[»] chr8 (35 HSPs)
chr8 (95-196)||(7317348-7317449)
chr8 (99-223)||(1554353-1554477)
chr8 (100-223)||(18726619-18726742)
chr8 (99-214)||(35394347-35394462)
chr8 (101-223)||(33444627-33444747)
chr8 (104-212)||(29421493-29421601)
chr8 (99-223)||(35818423-35818547)
chr8 (99-223)||(38364029-38364153)
chr8 (102-209)||(21137134-21137241)
chr8 (97-223)||(26601935-26602060)
chr8 (97-223)||(32660930-32661056)
chr8 (106-223)||(3049957-3050074)
chr8 (99-223)||(12710593-12710717)
chr8 (99-223)||(16313506-16313630)
chr8 (99-223)||(25837859-25837983)
chr8 (99-223)||(37392545-37392669)
chr8 (99-223)||(38132736-38132860)
chr8 (104-223)||(7931187-7931306)
chr8 (100-223)||(10896217-10896340)
chr8 (100-197)||(40197076-40197173)
chr8 (99-209)||(41228713-41228823)
chr8 (96-209)||(26062106-26062219)
chr8 (100-223)||(18298060-18298183)
chr8 (98-209)||(34672296-34672407)
chr8 (101-196)||(42755842-42755937)
chr8 (106-223)||(15226912-15227029)
chr8 (106-223)||(38437402-38437519)
chr8 (102-209)||(5020492-5020602)
chr8 (139-223)||(14763970-14764054)
chr8 (107-196)||(41432715-41432804)
chr8 (101-196)||(39075568-39075663)
chr8 (97-136)||(8635669-8635708)
chr8 (167-222)||(19160808-19160863)
chr8 (102-133)||(31117546-31117577)
chr8 (101-195)||(25899608-25899702)
[»] scaffold0006 (3 HSPs)
scaffold0006 (91-223)||(201873-202005)
scaffold0006 (106-223)||(143561-143678)
scaffold0006 (139-196)||(119295-119352)
[»] chr3 (38 HSPs)
chr3 (96-223)||(8476304-8476431)
chr3 (95-209)||(6231496-6231610)
chr3 (91-209)||(24574537-24574655)
chr3 (97-223)||(26848970-26849096)
chr3 (99-223)||(31435922-31436046)
chr3 (99-223)||(40908213-40908337)
chr3 (99-222)||(43132156-43132279)
chr3 (100-209)||(28124436-28124545)
chr3 (100-223)||(9320448-9320571)
chr3 (99-209)||(18460901-18461013)
chr3 (108-209)||(53165733-53165834)
chr3 (99-223)||(11239119-11239243)
chr3 (96-216)||(20414461-20414581)
chr3 (99-209)||(44952270-44952380)
chr3 (99-223)||(20297741-20297865)
chr3 (100-209)||(47114857-47114966)
chr3 (102-223)||(1099146-1099267)
chr3 (119-223)||(31611004-31611108)
chr3 (103-223)||(48339760-48339880)
chr3 (104-223)||(33217917-33218036)
chr3 (100-209)||(12228256-12228365)
chr3 (106-185)||(26849164-26849240)
chr3 (97-209)||(27093977-27094090)
chr3 (99-223)||(6831956-6832078)
chr3 (99-163)||(43715307-43715371)
chr3 (139-223)||(46359900-46359984)
chr3 (103-195)||(32071420-32071508)
chr3 (97-191)||(2565457-2565551)
chr3 (139-196)||(27823249-27823306)
chr3 (99-196)||(33647702-33647799)
chr3 (110-209)||(1246912-1247011)
chr3 (97-196)||(28770207-28770306)
chr3 (115-188)||(10822733-10822806)
chr3 (139-196)||(39932562-39932621)
chr3 (102-211)||(40584560-40584669)
chr3 (115-196)||(44534194-44534275)
chr3 (99-223)||(28139719-28139843)
chr3 (102-196)||(28693428-28693522)
[»] chr5 (34 HSPs)
chr5 (97-223)||(12970527-12970653)
chr5 (96-223)||(4765556-4765683)
chr5 (96-223)||(18412157-18412284)
chr5 (96-223)||(29543011-29543138)
chr5 (97-209)||(555703-555815)
chr5 (99-223)||(19065504-19065628)
chr5 (100-207)||(43346895-43347002)
chr5 (103-223)||(11855658-11855778)
chr5 (99-223)||(22935911-22936035)
chr5 (98-222)||(27481306-27481430)
chr5 (99-223)||(28602504-28602627)
chr5 (86-209)||(42012164-42012288)
chr5 (101-223)||(6930588-6930714)
chr5 (97-209)||(14206818-14206930)
chr5 (104-223)||(6091663-6091782)
chr5 (100-223)||(36703822-36703945)
chr5 (102-195)||(32535913-32536006)
chr5 (101-209)||(15200547-15200655)
chr5 (102-196)||(26637045-26637139)
chr5 (111-196)||(27480984-27481069)
chr5 (124-223)||(8646415-8646514)
chr5 (106-223)||(8406842-8406959)
chr5 (139-223)||(17251760-17251844)
chr5 (98-212)||(16720211-16720324)
chr5 (102-208)||(20962553-20962659)
chr5 (99-223)||(40275753-40275878)
chr5 (113-196)||(28429676-28429759)
chr5 (101-196)||(36978172-36978267)
chr5 (167-209)||(41783687-41783729)
chr5 (139-196)||(31583102-31583158)
chr5 (101-209)||(3913201-3913308)
chr5 (139-195)||(830059-830115)
chr5 (101-197)||(19089718-19089814)
chr5 (139-195)||(35348566-35348621)
[»] chr7 (45 HSPs)
chr7 (95-223)||(39554131-39554259)
chr7 (99-209)||(27248255-27248365)
chr7 (99-223)||(11000650-11000775)
chr7 (99-196)||(48160590-48160687)
chr7 (99-195)||(41684021-41684117)
chr7 (104-223)||(38396370-38396489)
chr7 (97-223)||(8419586-8419712)
chr7 (99-209)||(28904185-28904295)
chr7 (99-209)||(33378804-33378914)
chr7 (99-209)||(48314084-48314194)
chr7 (98-223)||(27213853-27213978)
chr7 (100-209)||(44566007-44566116)
chr7 (99-223)||(9946989-9947113)
chr7 (99-223)||(11329941-11330065)
chr7 (99-223)||(35488188-35488312)
chr7 (99-223)||(9814217-9814337)
chr7 (100-223)||(40212837-40212960)
chr7 (97-223)||(27419221-27419347)
chr7 (101-223)||(45265049-45265171)
chr7 (100-209)||(38544156-38544265)
chr7 (99-223)||(16825353-16825477)
chr7 (99-223)||(45045574-45045698)
chr7 (103-223)||(48341311-48341430)
chr7 (93-223)||(18824093-18824224)
chr7 (97-196)||(25924634-25924733)
chr7 (101-196)||(43949220-43949315)
chr7 (104-223)||(45448890-45449009)
chr7 (101-215)||(41632365-41632479)
chr7 (100-215)||(47246064-47246181)
chr7 (98-223)||(25098017-25098142)
chr7 (101-162)||(45723216-45723277)
chr7 (99-223)||(25045617-25045740)
chr7 (102-212)||(6656226-6656335)
chr7 (102-209)||(44820216-44820323)
chr7 (139-195)||(10902689-10902745)
chr7 (101-223)||(34930466-34930590)
chr7 (95-162)||(31921743-31921809)
chr7 (107-222)||(43445890-43446005)
chr7 (101-223)||(30685993-30686115)
chr7 (139-223)||(5543170-5543254)
chr7 (103-191)||(6656476-6656563)
chr7 (153-223)||(45723097-45723167)
chr7 (106-208)||(31598640-31598742)
chr7 (103-151)||(19156637-19156685)
chr7 (103-151)||(20756036-20756084)
[»] chr6 (15 HSPs)
chr6 (99-223)||(6705764-6705888)
chr6 (97-223)||(2657648-2657774)
chr6 (107-209)||(16968887-16968989)
chr6 (97-209)||(7053567-7053679)
chr6 (100-223)||(1316966-1317089)
chr6 (89-223)||(7344072-7344206)
chr6 (99-196)||(14170988-14171085)
chr6 (97-188)||(8029316-8029407)
chr6 (103-208)||(345833-345939)
chr6 (103-209)||(18897883-18897989)
chr6 (106-223)||(9760376-9760493)
chr6 (111-196)||(21008035-21008120)
chr6 (94-195)||(3869481-3869582)
chr6 (100-135)||(10246222-10246257)
chr6 (167-209)||(14781687-14781729)
[»] scaffold0702 (1 HSPs)
scaffold0702 (99-223)||(3564-3688)
[»] scaffold0662 (1 HSPs)
scaffold0662 (99-223)||(4416-4540)
[»] scaffold0189 (1 HSPs)
scaffold0189 (105-223)||(28957-29075)
[»] scaffold0238 (1 HSPs)
scaffold0238 (101-222)||(23297-23418)


Alignment Details
Target: chr4 (Bit Score: 164; Significance: 9e-88; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 30416057 - 30415862
Alignment:
Q  20 gaatagtagttaatcctactattttattatattagtcctaattcatgtgacacaatgaaaattggtttttataaaactaagggtgtgtttgtttcaagtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30416057 gaatagtagttaatcctactattttattatattagtcctaattcatgtgacacaatgaaaattggttcttataaaactaagggtgtgtttgtttcaagtt 30415958  T
Q  120 atatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattctt 215  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||| |||||    
T  30415957 atatttgttgattcccgataataaaatgataggaatatatatgtctgtgtttgttacaagtttactaaattttattcccaaatataaaatgttctt 30415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6279918 - 6280044
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||  ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  6279918 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatgtttgttacaagtttactaaattttattc 6280017  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  6280018 ccgggtataaaatgttcctgggaatag 6280044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 39730292 - 39730416
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| || |||||||||   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  39730292 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattccc 39730391  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  39730392 gggtataaaatgttcctgggaatag 39730416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 55967999 - 55968123
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  55967999 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctctgtttgttacaagtttactaaattttattccc 55968098  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  55968099 gggtataaaatgttcctgggaatag 55968123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 23686865 - 23686750
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| |||||||||| || ||||||||| |||||||||||| |||||||    
T  23686865 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtttgttacaagtttactaaaatttattc 23686766  T
Q  197 tcaggtataaaatatt 212  Q
       |||||||||||||    
T  23686765 cttggtataaaatatt 23686750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 34049597 - 34049720
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||       
T  34049597 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattccag 34049696  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  34049697 ggtataaaatgttcctgggaatag 34049720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 48518891 - 48519014
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| || |||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| ||    
T  48518891 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccca 48518990  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  48518991 ggtataaaatgttcctgggaatag 48519014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 45747795 - 45747905
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  45747795 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 45747894  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  45747895 gggtataaaat 45747905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 27555486 - 27555377
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  27555486 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattcgc 27555387  T
Q  199 aggtataaaa 208  Q
     |||||||||    
T  27555386 gggtataaaa 27555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 27762893 - 27763022
Alignment:
Q  94 aactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta 193  Q
    ||||| ||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||    
T  27762893 aactatgggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaatttta 27762992  T
Q  194 ttctcaggtataaaatattcttgagaatag 223  Q
    ||| | |||||||||| ||| || ||||||    
T  27762993 ttcccgggtataaaatgttcctgggaatag 27763022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 936202 - 936078
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||| | |||||||||  || ||||||||| |||||||||||||||||||| |    
T  936202 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatgtttgttacaagtttactaaattttattccc 936103  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     || ||||||| ||| || ||||||    
T  936102 gggcataaaatgttcctgggaatag 936078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 9327244 - 9327344
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttg-ttataagtttactaaattttattct 197  Q
    ||||||| ||| |||||||||||||||||||||||| || ||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  9327244 agggtgtttttatttcaagttatatttgttgattcctaaaaataaaatgttagaaatatatatgtctatgtttgtttataagtttactaaattttattct 9327343  T
Q  198 c 198  Q
    |    
T  9327344 c 9327344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 9374003 - 9374103
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttg-ttataagtttactaaattttattct 197  Q
    ||||||| ||| |||||||||||||||||||||||| || ||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  9374003 agggtgtttttatttcaagttatatttgttgattcctaaaaataaaatgttagaaatatatatgtctatgtttgtttataagtttactaaattttattct 9374102  T
Q  198 c 198  Q
    |    
T  9374103 c 9374103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 43723340 - 43723216
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  43723340 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 43723241  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  43723240 tggtataaaatgttcctgggaatag 43723216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 40435979 - 40435852
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| ||||||    
T  40435979 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttatt 40435880  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    |   |||||||||| ||| || ||||||    
T  40435879 ccttggtataaaatgttcctgggaatag 40435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 48879403 - 48879277
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  48879403 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 48879304  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  48879303 cttggtataaaatgttcctgggaatag 48879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 32953598 - 32953489
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||| |||||||||| |||||||||||||  || |||||||||| ||| |||||| || | ||||||| ||||||||||||||||||||||     
T  32953598 gggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctatctttgttacaagtttactaaattttattctcg 32953499  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  32953498 ggtataaaat 32953489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 25932517 - 25932393
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  25932517 agggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 25932418  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  25932417 tggtataaaatgttcctgggaatag 25932393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 39498901 - 39498777
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||| | ||||||||| |||||||||||| |||||||      
T  39498901 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttgttacaagtttactaaaatttattcct 39498802  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  39498801 tggtataaaatgttcatgggaatag 39498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 39502240 - 39502116
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||| | ||||||||| |||||||||||| |||||||      
T  39502240 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttgttacaagtttactaaaatttattcct 39502141  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  39502140 tggtataaaatgttcatgggaatag 39502116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 13229989 - 13230112
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| || || ||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |     
T  13229989 gggtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaattttattcccg 13230088  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  13230089 ggtataaaatgttcctgggaatag 13230112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 18405233 - 18405356
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| |||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  18405233 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 18405332  T
Q  199 aggtataaaatattcttgagaata 222  Q
     |||||||||| ||| || |||||    
T  18405333 tggtataaaatgttcctgggaata 18405356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 35999765 - 35999638
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| ||||||    
T  35999765 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttatt 35999666  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    |   |||||||||| ||| || ||||||    
T  35999665 ccttggtataaaatgttcctgggaatag 35999638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 18931826 - 18931705
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||||||||||||| ||||||||| |    ||||||||||||| ||| ||||||||| |||||| ||||||||||||||||||||||| |  |    
T  18931826 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatgtttggtataagtttactaaattttattcccgtg 18931727  T
Q  202 tataaaatattcttgagaatag 223  Q
    |||||||| ||| || ||||||    
T  18931726 tataaaatgttcctgggaatag 18931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 10400810 - 10400918
Alignment:
Q  105 tgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtat 204  Q
    ||||||||||||||||||||||||||||      ||||||||||||| ||| ||||||||| ||||| ||| |||||||||||||||||||||  |||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatgtttattacaagtttactaaattttattcttgggtat 10400909  T
Q  205 aaaatattc 213  Q
    |||||||||    
T  10400910 aaaatattc 10400918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 41859046 - 41859170
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||||||| | ||| |||||| || ||||||||| |||||||||  ||||||||| |    
T  41859046 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactttattttattccc 41859145  T
Q  199 aggtataaaatattcttgagaatag 223  Q
    ||||||||||| ||| || ||||||    
T  41859146 aggtataaaatgttcctgggaatag 41859170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 8322308 - 8322197
Alignment:
Q  112 ttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatat 211  Q
    ||||||||||| |||||||||||    ||||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||   ||||||||||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatgtttgttacaagtttactaaaatttattccttggtataaaatat 8322209  T
Q  212 tcttgagaatag 223  Q
    ||||| ||||||    
T  8322208 tcttgggaatag 8322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 50672903 - 50673014
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    ||||||||||||||||||| ||||||   |||||||||||    ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||    
T  50672903 actaagggtgtgtttgttttaagttaa--ttgttgattccggg-aataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttat 50672999  T
Q  195 tctcaggtataaaat 209  Q
    |||| ||||||||||    
T  50673000 tctcgggtataaaat 50673014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 39835304 - 39835430
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||  ||| ||||||  | ||||||||| |||||||||||| |||||||    
T  39835304 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatgtttgttacaagtttactaaaatttattc 39835403  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  39835404 cttggtataaaatgttcctgggaatag 39835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 42774024 - 42773914
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| |    ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  42774024 agggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 42773925  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  42773924 gggtataaaat 42773914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 47670436 - 47670314
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| |||||||||||    ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||   |    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattccttg 47670337  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| ||| || ||||||    
T  47670336 gtataaaatgttcctgggaatag 47670314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 25916032 - 25916142
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| || |||||||||   ||||||||||||| |  || |||| || ||||||||| ||||||||||||||||||||    
T  25916032 taagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgatagga--atgtatgcctatgtttgttacaagtttactaaattttattc 25916129  T
Q  197 tcaggtataaaat 209  Q
     | ||||||||||    
T  25916130 ccgggtataaaat 25916142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 9382297 - 9382381
Alignment:
Q  115 aagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttg-ttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||| || ||||||||| ||| ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  9382297 aagttatatttgttgattcctaaaaataaaatgttagaaatatatatgtctatgtttgtttataaatttactaaattttattctc 9382381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 7259036 - 7258943
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||| ||||||||||||||||||| || ||||||  | ||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||    
T  7259036 ggtgcgtttgtttcaagttatattggtagattccttagaataaaatgatag-aatatacatgtctttgtttgttacaagtttactaaattttatt 7258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 27942814 - 27942689
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtc------tgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||      | ||||| ||||||||||||||||||||||||     
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgtttatgtttattataagtttactaaattttattcc 27942715  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    | |||||||||| ||| || ||||||    
T  27942714 cgggtataaaatgttcctgggaatag 27942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 38414278 - 38414173
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    ||||||||||| | |||||||||||||||||||   |  |||||||||||| |||||| |||||| ||||||| |||||||||||||||||||||| ||     
T  38414278 ggtgtgtttgtctaaagttatatttgttgattcggga--ataaaatgatagaaatatacatgtctatgtttgtaataagtttactaaattttattc-cat 38414182  T
Q  201 gtataaaat 209  Q
    |||||||||    
T  38414181 gtataaaat 38414173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 41744216 - 41744344
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta-t 194  Q
    ||||| |||||||| |||||||||||| ||||||||| ||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||| |    
T  41744216 ctaagagtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttatt 41744315  T
Q  195 tctcaggtataaaatattcttgagaatag 223  Q
    |||  |||||||||| ||| || ||||||    
T  41744316 tctttggtataaaatgttcctgggaatag 41744344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 45596344 - 45596220
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||| ||||||||||||||||| |||||||||  |   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  45596344 agggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 45596245  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  45596244 tggtataaaatgttcctgggaatag 45596220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 36858368 - 36858499
Alignment:
Q  90 ataaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaat 189  Q
    |||||| | ||||||||||||||||||||||||||  | ||||||||| ||||||| |||||  | ||  |||  | ||||||||| |||||||||||||    
T  36858368 ataaaatttagggtgtgtttgtttcaagttatattcttagattcccaagaataaaaagatag--aaatgcatgcttatgtttgttacaagtttactaaat 36858465  T
Q  190 tttattctcaggtataaaatattcttgagaatag 223  Q
    ||||| | | |||||||||| ||| |||||||||    
T  36858466 tttatgcccgggtataaaatgttcctgagaatag 36858499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 36860191 - 36860106
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaa 187  Q
    |||||||||||||||||||||||||||||||| |  | ||||||||||||  ||||||||||| | ||||||||| |||||||||||    
T  36860191 ggtgtgtttgtttcaagttatatttgttgatttctta-aataaaatgatataaatatatatgtttatgtttgttacaagtttactaa 36860106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 26165440 - 26165343
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||||||| ||||||||||| ||||||  | |||||||| |||  |||  | |||| | ||||||||| ||||||||||||||||||||    
T  26165440 agggtgtgtttgtttcatgttatatttgtagattcctgagaataaaatcataaaaatgcacatgtttatgtttgttacaagtttactaaattttattc 26165343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 12275953 - 12276007
Alignment:
Q  142 aaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  12275953 aaaatgatagaaatatatatgtttatgtttgttacaagtttactaaattttattc 12276007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 44309829 - 44309739
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||||||||| || |||| |  | ||||||| ||||| |||||  |||||| ||||||||| ||| ||||||||||||||||    
T  44309829 gtttgtttcaagttatattcgtagatttctgaaaataaaacgatagaaatatgcatgtctatgtttgttacaaggttactaaattttattc 44309739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 47426258 - 47426336
Alignment:
Q  118 ttatatttgttgattcccaataataaaatgatagcaatat-atatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||||||| | ||||||  | ||||||||||||  ||||| |||||||| ||||||||| |||||||||||||||||||    
T  47426258 ttatatttatcgattcctgagaataaaatgatatgaatattatatgtctatgtttgttacaagtttactaaattttatt 47426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 18405828 - 18405719
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||| ||||||||||    |||| || | ||||||| ||||  |||||| || ||| ||||||||| |||||||| ||||||||||   |    
T  18405828 gggtgtgtttgttttaagttatattcagagatttccgagaataaaacgatataaatatacatatctatgtttgttacaagtttacaaaattttatttcta 18405729  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  18405728 ggtataaaat 18405719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 22654516 - 22654600
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||| |||||| ||| || ||||| ||| ||||| ||||| |||||||||| |||| ||||| || ||| ||||||    
T  22654516 aataaaatgatagaaatatacatgcctatgtttattacaagttaactaatttttattctcgggtaaaaaatgttattgcgaatag 22654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 34237424 - 34237480
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatata 160  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtata 34237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 52469753 - 52469678
Alignment:
Q  120 atatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||| |||||  | ||||||||||||| | |  |||||||| ||||||||| ||||||| |||||||||||    
T  52469753 atatttgtttattcctcaaaataaaatgatagaattgcatatgtctatgtttgttacaagtttattaaattttatt 52469678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 34238011 - 34238077
Alignment:
Q  157 tatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    |||||| || ||||||||| |||||||||||| |||||||   |||||||||| |||||| ||||||    
T  34238011 tatatgcctatgtttgttacaagtttactaaaatttattccttggtataaaatgttcttgggaatag 34238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 24805088 - 24805193
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    ||||||||||||||||||| || || |||| |  | ||||||| || |  |||||| |||| | ||||||||| || |||||||||||||||| || ||     
T  24805088 tgtgtttgtttcaagttattttcgtagatttctgagaataaaacgaaaaaaatatacatgtttatgtttgttacaaatttactaaattttattttcggga 24805187  T
Q  203 ataaaa 208  Q
    ||||||    
T  24805188 ataaaa 24805193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 27357954 - 27358086
Alignment:
Q  91 taaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatt 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||  || ||||||||| ||||||||| ||||||||||||||    
T  27357954 taaaattaagggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatgtttgttacaagtttactaaatt 27358053  T
Q  191 ttattctcaggtataaaatattcttgagaatag 223  Q
    |||||| |||||||||||||||| || ||||||    
T  27358054 ttattcccaggtataaaatattcatgggaatag 27358086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 14832877 - 14832758
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||| ||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatgtttgttaaaagtttactaaattttattcccaggta 14832778  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| |||||| ||||||    
T  14832777 taaaatgttcttgggaatag 14832758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 45409330 - 45409198
Alignment:
Q  91 taaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatt 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||| || ||||| ||| ||||||||||||||    
T  45409330 taaaattaagggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatgttttttacaagtttactaaatt 45409231  T
Q  191 ttattctcaggtataaaatattcttgagaatag 223  Q
    |||||  | |||||||||||||| || ||||||    
T  45409230 ttattaccgggtataaaatattcatgggaatag 45409198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 6171865 - 6171739
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  6171865 taagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 6171766  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  6171765 ccgggtataaaatgttcctgggaatag 6171739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 6571762 - 6571649
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||||||||| ||||||| |||||||||||||||||| ||   ||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||    
T  6571762 ctaagggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatgtttgttacaagtttactaaattttatt 6571663  T
Q  196 ctcaggtataaaat 209  Q
    ||||||||||||||    
T  6571662 ctcaggtataaaat 6571649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 34356699 - 34356823
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| |||||| ||||||||||||||||||||||| |    
T  34356699 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttggtataagtttactaaattttattccc 34356798  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  34356799 gggtataaaatgttcctgggaatag 34356823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 17966055 - 17965945
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||| | ||| ||||||||| ||||||||| |||||||| ||||||||||| |    
T  17966055 agggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatgtttgttacaagtttaccaaattttattccc 17965956  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  17965955 gggtataaaat 17965945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 37534030 - 37533914
Alignment:
Q  93 aaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttt 192  Q
    |||||||||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  37534030 aaactaagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaatttt 37533931  T
Q  193 attctcaggtataaaat 209  Q
    ||||   ||||||||||    
T  37533930 attcctgggtataaaat 37533914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 28311701 - 28311820
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||| || ||||||||| ||||||||| |||||||||| | ||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatgtttgttacaagtttactgaattttattcccgggta 28311800  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| || ||||||    
T  28311801 taaaatgttcctgggaatag 28311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 37233496 - 37233377
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| || ||||||| || ||||||||| |||||||||||||||||||| | ||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatgtttgttacaagtttactaaattttattcccgggta 37233397  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| || ||||||    
T  37233396 taaaatgttcctgggaatag 37233377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 346342 - 346468
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| ||||||||||||    
T  346342 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttattc 346441  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  346442 ccgggtataaaatgttcctgggaatag 346468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 2050940 - 2050814
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| ||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| |||||  || ||||||||| ||||||||||||||||||||    
T  2050940 taagtgtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatgtttgttacaagtttactaaattttattc 2050841  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  2050840 ccgggtataaaatgttcctgggaatag 2050814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 2521749 - 2521623
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||||||||| | ||| |||||| || ||||||||| ||||||||||||||||||||    
T  2521749 taagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattc 2521650  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  2521649 ctgggtataaaatgttcctgggaatag 2521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 11071679 - 11071553
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  11071679 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 11071580  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  11071579 ccgggtataaaatgttcctgggaatag 11071553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 21737399 - 21737509
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||      
T  21737399 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattcct 21737498  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  21737499 gggtataaaat 21737509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 18713660 - 18713773
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||||||||||||||    |||||||||||||  |||||||||| || ||||||||| |||||||||||||||||||| | |||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatgtttgttacaagtttactaaattttattcccgggt 18713759  T
Q  203 ataaaatattcttg 216  Q
    ||||||| ||||||    
T  18713760 ataaaatgttcttg 18713773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 4559631 - 4559507
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| | ||| |||||| || ||||||||| |||||||||  ||||||||| |    
T  4559631 agggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatgtttgttacaagtttactttattttattccc 4559532  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  4559531 gggtataaaatgttcctgggaatag 4559507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 14777494 - 14777621
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||| ||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||    
T  14777494 ctaagggtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttatt 14777593  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    | | |||||||||| ||| || ||||||    
T  14777594 cccgggtataaaatgttcctgggaatag 14777621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 25455099 - 25454972
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||||||||||||||||||||||||||||||| ||||||  | |||||||| |||  |||| |||||||| ||||||||| ||||||||||||||| |||    
T  25455099 ctaagggtgtgtttgtttcaagttatatttgtagattcctgagaataaaatcataaaaatacatatgtctatgtttgttacaagtttactaaatttcatt 25455000  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    |||  ||||||||| ||| || ||||||    
T  25454999 ctcgagtataaaatgttcctgggaatag 25454972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 39995128 - 39995227
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  39995128 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 39995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 5770108 - 5770233
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||| |||||||||||||||||| |||||||||||    ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||     
T  5770108 aagggtatgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcc 5770207  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    | |||||||||| ||| || ||||||    
T  5770208 cgggtataaaatgttcctgggaatag 5770233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 20426473 - 20426606
Alignment:
Q  90 ataaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaat 189  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||    
T  20426473 ataaaacatagggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatgtttgttacaagtttactaaat 20426572  T
Q  190 tttattctcaggtataaaatattcttgagaatag 223  Q
    ||||| | | | |||||||| ||| || ||||||    
T  20426573 tttatccccggatataaaatgttcctgggaatag 20426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 24499509 - 24499399
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||   ||    
T  24499509 gtgtgtttgtttcaagttatatttgttgattcatagaaataaaatgatagaaatatata--tctatgtttgttataagtttactaaattttattccatgg 24499412  T
Q  202 tataaaatattct 214  Q
    |||||||| ||||    
T  24499411 tataaaatgttct 24499399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 42674655 - 42674784
Alignment:
Q  94 aactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta 193  Q
    |||| |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||    
T  42674655 aacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaatttta 42674754  T
Q  194 ttctcaggtataaaatattcttgagaatag 223  Q
    ||| | || ||||||| ||| || ||||||    
T  42674755 ttcccgggcataaaatgttcctgggaatag 42674784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 9733846 - 9733968
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||       
T  9733846 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcctt 9733945  T
Q  200 ggtataaaatattcttgagaata 222  Q
    |||||||||| ||| || |||||    
T  9733946 ggtataaaatgttcctgggaata 9733968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 41750599 - 41750477
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| ||||||||||| |  ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||   |    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattccttg 41750500  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| ||| || ||||||    
T  41750499 gtataaaatgttcctgggaatag 41750477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 37192591 - 37192470
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| ||||||| |||| |||||||   ||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttgttacaagtttattaaaatttattccttgg 37192492  T
Q  202 tataaaatattcttgagaatag 223  Q
    |||||||| ||| || ||||||    
T  37192491 tataaaatgttcctgggaatag 37192470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 40950858 - 40950981
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||||||||||  | ||||||||| |||||||||||| |||||||      
T  40950858 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatgtttgttacaagtttactaaaatttattcct 40950957  T
Q  199 aggtataaaatattcttgagaata 222  Q
     |||||||||| ||| || |||||    
T  40950958 tggtataaaatgttcctgggaata 40950981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 14253578 - 14253484
Alignment:
Q  115 aagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaat 209  Q
    ||||||||||||||||||| |   ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |  |||||||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatgtttgttacaagtttactaaattttattcccgagtataaaat 14253484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 638660 - 638555
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| ||||||||| ||||||||| | |||||||||||||||||  | ||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtttgttacaggtttactaaattttatttccgggta 638561  T
Q  204 taaaat 209  Q
    ||||||    
T  638560 taaaat 638555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 3902521 - 3902404
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    |||||||||||||||||||||||  ||||  | ||||||||||||| ||||||||    | ||||||||| |||||||||||||||||||||||||| ||    
T  3902521 gtttgtttcaagttatatttgttctttcctgagaataaaatgatagaaatatatagacatatgtttgttacaagtttactaaattttattctcaggttta 3902422  T
Q  206 aaatattcttgagaatag 223  Q
    |||| ||| || ||||||    
T  3902421 aaatgttcctgggaatag 3902404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 41729129 - 41729253
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| || || ||||||   ||||||||||||| |||  ||||| || ||||||||| |||||||||||||||||||  |    
T  41729129 agggtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatgtttgttacaagtttactaaattttattgcc 41729228  T
Q  199 aggtataaaatattcttgagaatag 223  Q
    || |||||||| ||| || ||||||    
T  41729229 agatataaaatgttcctgggaatag 41729253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 1988382 - 1988259
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||| |||||||||||||||||| |    ||||||||||||| |||||| ||| || ||||||||| ||||||| |||||||||||  |     
T  1988382 gggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatgtttgttacaagtttattaaattttatttccg 1988283  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    | |||||||| |||||| ||||||    
T  1988282 gatataaaatgttcttgggaatag 1988259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 11763374 - 11763483
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    |||||||| ||||||||||||||||||| ||  |   ||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |     
T  11763374 gtgtgttt-tttcaagttatatttgttgtttttcgggaatgaaatgataggaatatatatgtctatgtttgttataaatttactaaattttattctcgga 11763472  T
Q  202 tataaaatatt 212  Q
     ||||||||||    
T  11763473 cataaaatatt 11763483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 45694260 - 45694151
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||| ||||||||||||||||||| || |||| |    ||||||||||||| |||| | |||||| ||||||||| |||||||||||||||||||| |    
T  45694260 agggtgcgtttgtttcaagttatattcgtagatttctgggaataaaatgataggaatacacatgtctatgtttgttacaagtttactaaattttattccc 45694161  T
Q  199 aggtataaaa 208  Q
     |||||||||    
T  45694160 gggtataaaa 45694151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 14403231 - 14403342
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||||||||||||| ||||| ||||||||||||||    ||||||||||||  |||||| ||| ||   ||| ||| ||||||| |||||||||||||    
T  14403231 aagggtgtgtttgtttgaagttgtatttgttgattcctggaaataaaatgataaaaatatacatgcctacatttattacaagtttaataaattttattct 14403330  T
Q  198 caggtataaaat 209  Q
    ||||||||||||    
T  14403331 caggtataaaat 14403342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 39819771 - 39819657
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||| |||||||||||||||||||||||| ||||||  | |||||||| ||   |||| ||||| || ||||||||| ||||||||||||||| |||    
T  39819771 ctaagggcgtgtttgtttcaagttatatttgtagattcctgaaaataaaatcatgaaaatacatatgcctatgtttgttacaagtttactaaatttcatt 39819672  T
Q  196 ctcaggtataaaata 210  Q
    | | |||||| ||||    
T  39819671 cccgggtatataata 39819657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 40570095 - 40569968
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| |||| ||||||    |||||||| |||  || ||| ||| || ||||||||| ||||||  |||||||||||    
T  40570095 ctaagggtgtgtttgtttcaagttataattgtagattcctgggaataaaatcataaaaacatacatgcctatgtttgttacaagtttgttaaattttatt 40569996  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    | | |||||||||| ||| || ||||||    
T  40569995 cccgggtataaaatgttcctgggaatag 40569968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 5002836 - 5002945
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||| |||||||||||||||||||||| |||| | || ||||||||||||| | |||| |||  | | ||||||| |||||| ||||||||||||| |    
T  5002836 agggtgcgtttgtttcaagttatatttgtagatttctaagaataaaatgatagaagtatacatgcatatatttgttacaagtttgctaaattttattc-c 5002934  T
Q  199 aggtataaaat 209  Q
    | |||||||||    
T  5002935 aagtataaaat 5002945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 26310335 - 26310215
Alignment:
Q  105 tgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtc--tgtgtttgttataagtttactaaattttattctcaggt 202  Q
    ||||||||| |||||||| ||||||||||||   ||||||||||||| ||| ||||||||  | ||||||||| ||||||| |||| |||||||   |||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatatgtttgttagaagtttattaaaatttattccttggt 26310236  T
Q  203 ataaaatattcttgagaatag 223  Q
    ||||||| ||| || ||||||    
T  26310235 ataaaatgttcctgggaatag 26310215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 1623455 - 1623336
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||| ||||||||| || ||||||||||||||||| || | |||||| |||| ||||||||||||| || ||||||  |||||| ||||||| ||||     
T  1623455 aagggtatgtttgttttaaattatatttgttgattcctaagagtaaaataatagaaatatatatgtctatg-ttgttacgagtttattaaatttgattcc 1623357  T
Q  198 caggtataaaatattcttgag 218  Q
    | | |||||||| ||| ||||    
T  1623356 cggttataaaatgttcctgag 1623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 1723230 - 1723325
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||||||||||||||||| |||||  ||| |||  ||||||||||| | |||||| || ||  ||||||||| ||||||| |||||||||||||    
T  1723230 gtgtgtttgtttcaagttatgtttgtatatttccatgaataaaatgatggaaatatacatttcaatgtttgttacaagtttattaaattttattct 1723325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 7007645 - 7007551
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta 193  Q
    ||||||||||| |||||||||||||||||||||||      |||||||||| | ||||||| ||||  |||||  || |||||||||||||||||    
T  7007645 agggtgtgtttatttcaagttatatttgttgattcttggggataaaatgatggaaatatatttgtcaatgtttcatacaagtttactaaatttta 7007551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 25625420 - 25625334
Alignment:
Q  137 ataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||||| |||||  ||||||  |||||||  || ||||||| |||||||||| ||||||||||| ||| || ||||||    
T  25625420 ataataaaatgatagaaatatgaatgtctaggtttgttgcaaatttactagattttattctgaggtataaaatgttcatgggaatag 25625334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 4685211 - 4685155
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||| |||||| |||| | |||||||||||| |||| |||||||||||    
T  4685211 aataaaatgatagaaatatacatgtttatgtttgttataaatttattaaattttatt 4685155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 23944165 - 23944111
Alignment:
Q  169 tttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||| |||||||||||||||||||||| | |||||||| ||| || ||||||    
T  23944165 tttgttacaagtttactaaattttattctcggatataaaatgttcctgggaatag 23944111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 4875856 - 4875751
Alignment:
Q  90 ataaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaat 189  Q
    |||||||  |||||| |||||||| ||||||||||||| | ||      ||||||||||||| |||| || ||| | ||||||||| |||||| ||||||    
T  4875856 ataaaacatagggtgcgtttgttttaagttatatttgtagctttttggaaataaaatgatagaaataaatttgtttatgtttgttacaagtttgctaaat 4875757  T
Q  190 tttatt 195  Q
    ||||||    
T  4875756 tttatt 4875751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 13539679 - 13539630
Alignment:
Q  160 atgtctgtgtttgttataagtttactaaattttattctcaggtataaaat 209  Q
    |||||| ||||||||| || |||| |||||||||||| ||||||||||||    
T  13539679 atgtctatgtttgttacaaatttattaaattttattcgcaggtataaaat 13539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 13761019 - 13760939
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttata 177  Q
    ||||| |||||||||||||||||||| || ||||||  |   ||||||||||||| ||||||| |  || |||||||||||    
T  13761019 taaggatgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaatatatgtacctatgtttgttata 13760939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 5518499 - 5518627
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||    
T  5518499 actaagggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatgtttgttacaagtttactaaattttat 5518598  T
Q  195 tctcaggtataaaatattcttgagaatag 223  Q
    || | |||||||||| ||| || ||||||    
T  5518599 tcccgggtataaaatgttcctgggaatag 5518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 29091741 - 29091640
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||    
T  29091741 taagggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgataaaaatatatatgtctatgtttgttacaagtttactaaattttattc 29091642  T
Q  197 tc 198  Q
    ||    
T  29091641 tc 29091640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 52630846 - 52630722
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||||    ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  52630846 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattctc 52630747  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  52630746 gggtataaaatgttcctgggaatag 52630722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 1007819 - 1007696
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||  |||||||| |||||||||||||||||||| |     
T  1007819 gggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgatatgaatatatatgtctaggtttgttacaagtttactaaattttattcccg 1007720  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    | |||||||| ||| || ||||||    
T  1007719 gatataaaatgttcctgggaatag 1007696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 48916019 - 48916145
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||| ||||||||||||||||||||||||  | ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||     
T  48916019 taagggtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaattttattt 48916118  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
    || |||||||||| ||| || ||||||    
T  48916119 tcgggtataaaatgttcatgggaatag 48916145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 2430569 - 2430445
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  2430569 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 2430470  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  2430469 gggtataaaatgttcctgggaatag 2430445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 3572560 - 3572688
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    |||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| ||||||||||    
T  3572560 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttat 3572659  T
Q  195 tctcaggtataaaatattcttgagaatag 223  Q
    || | |||||||||| ||| || ||||||    
T  3572660 tcccgggtataaaatgttcctgggaatag 3572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 39329681 - 39329557
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  39329681 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtttgttacaagtttactaaattttattccc 39329582  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  39329581 gggtataaaatgttcctgggaatag 39329557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 36361851 - 36361745
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcccaggt 36361752  T
Q  203 ataaaat 209  Q
    |||||||    
T  36361751 ataaaat 36361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 46666783 - 46666657
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| ||||||||||||||||||||    
T  46666783 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattc 46666684  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  46666683 ccgggtataaaatgttcctgggaatag 46666657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 47037532 - 47037406
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| |||||||||| || ||||||||| |||||||||||| |||||||    
T  47037532 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtttgttacaagtttactaaaatttattc 47037433  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  47037432 cttggtataaaatgttcctgggaatag 47037406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 52186049 - 52186142
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||    
T  52186049 tgtgtttgtttcaagttatatttgttgatttcttataataaaatgatagaaatatatatgtctatatttgttacaagtttactaaattttattc 52186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 2632927 - 2632801
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   |||||||| |||| ||| |||||| || ||||||||| ||||||| ||||||||||||    
T  2632927 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatgtttgttacaagtttattaaattttattc 2632828  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  2632827 ccgggtataaaatgttcctgggaatag 2632801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 9831867 - 9831993
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  9831867 taagtgtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 9831966  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  9831967 cttggtataaaatgttcctgggaatag 9831993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 1597341 - 1597465
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  1597341 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 1597440  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     | |||||||| ||| || ||||||    
T  1597441 ggatataaaatgttcctgggaatag 1597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 9115910 - 9115786
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  9115910 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 9115811  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  9115810 tggtataaaatgttcctgggaatag 9115786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 14788795 - 14788672
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| || |||||||||   |||||||| |||| ||| ||||||||| ||||||||| |||||||||||||| ||||| |     
T  14788795 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatgtttgttacaagtttactaaattatattcccg 14788696  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  14788695 ggtataaaatgttcctgggaatag 14788672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 20260086 - 20260209
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||||    ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |     
T  20260086 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattcccg 20260185  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  20260186 ggtataaaatgttcctgggaatag 20260209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 39930529 - 39930406
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||       
T  39930529 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcctt 39930430  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  39930429 ggtataaaatgttcctgggaatag 39930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 25789834 - 25789712
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||   |    
T  25789834 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattccttg 25789735  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| ||| || ||||||    
T  25789734 gtataaaatgttcctgggaatag 25789712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 6911569 - 6911456
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| |||||||||| |   ||||||||||||  ||| |||||| || ||||||||| |||||||||||||||||||    
T  6911569 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatgtttgttacaagtttactaaattttatt 6911470  T
Q  196 ctcaggtataaaat 209  Q
    |   ||||||||||    
T  6911469 cctgggtataaaat 6911456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 6978843 - 6978746
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  6978843 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 6978746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 12190175 - 12190300
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||||||||| |||||||||  |   ||||||||||||| ||| || ||| || ||||||||| ||||||||||||||||||||     
T  12190175 aagggtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatgtttgttacaagtttactaaattttattcc 12190274  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    | |||||||||| ||| || ||||||    
T  12190275 cgggtataaaatgttcctgggaatag 12190300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 13653917 - 13653800
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||| |||||||||||||  | ||||||||||||| ||||||||||| |  |||||||| |||||||||||||||||||| | | ||||    
T  13653917 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatgtatacgtttgttacaagtttactaaattttattcccggatata 13653818  T
Q  206 aaatattcttgagaatag 223  Q
    |||| ||| || ||||||    
T  13653817 aaatgttcctgggaatag 13653800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 35187530 - 35187405
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||||||||| |||||||||||| ||||||||||||   ||||||||||||| ||| ||||||| | ||||||||| |||||||||||| |||||||     
T  35187530 aagggtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtttatgtttgttacaagtttactaaaatttattcc 35187431  T
Q  198 caggtataaaatattcttgagaatag 223  Q
      |||||||||| ||| || ||||||    
T  35187430 ttggtataaaatgttcgtgggaatag 35187405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 4683371 - 4683483
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||| |||||||||| ||||| |||||||||||||  ||||||||||||| ||| |||||| || ||||||||| || |||||||||||||||||    
T  4683371 taagggtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatgtttgttacaaatttactaaattttattc 4683470  T
Q  197 tcaggtataaaat 209  Q
     | | ||||||||    
T  4683471 ccggatataaaat 4683483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 8332087 - 8331963
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||||||| | ||| |||||| || ||||||||  |||||||||||||||||||| |    
T  8332087 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttgttgcaagtttactaaattttattccc 8331988  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  8331987 gggtataaaatgttcctgggaatag 8331963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 17475321 - 17475443
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||| |||||||| |||||||||||  | | ||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||| |     
T  17475321 gggtatgtttgttacaagttatattcataggttcccgaaaataaaacgatagaaatatatatgtttatgtttgttataagtttactaaattttattcccg 17475420  T
Q  200 ggtataaaatattcttgagaata 222  Q
    |||||||||| ||| || |||||    
T  17475421 ggtataaaatgttcctgggaata 17475443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 20504990 - 20505111
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||| |||||||| || |||||||||| |||| |  | ||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||| |      
T  20504990 ggtgcgtttgttttaaattatatttgtagatttctgagaataaaatgatagaaatatacatgtctatgtttgttacaagtttactaaattttattcacga 20505089  T
Q  201 gtataaaatattcttgagaata 222  Q
    ||||||||||||| || |||||    
T  20505090 gtataaaatattcctgggaata 20505111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 49822916 - 49823009
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttt 192  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||    
T  49822916 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaatttt 49823009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 5806285 - 5806410
Alignment:
Q  94 aactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta 193  Q
    ||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| |    ||||||| |||||||||||| ||||    
T  5806285 aactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcc----tttgttacaagtttactaaaattta 5806380  T
Q  194 ttctcaggtataaaatattcttgagaatag 223  Q
    |||   |||||||||| ||| || ||||||    
T  5806381 ttccttggtataaaatgttcctgggaatag 5806410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 30241075 - 30240985
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||||     |||||||||||||| |||||||||| || ||||||||| ||||||| ||||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatgtttgttacaagtttattaaattttattc 30240985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 37436630 - 37436744
Alignment:
Q  109 tgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaa 208  Q
    ||||||| ||||||||||||||||| | | ||||||||||||| ||| ||||||  | ||||||||| ||||||||||||||||||| || | |||||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatgtttgttacaagtttactaaattttattttcggatataaaa 37436729  T
Q  209 tattcttgagaatag 223  Q
    | ||  |||||||||    
T  37436730 tgttactgagaatag 37436744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 32824992 - 32824899
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||| ||||||||| ||   |||||||| |||| ||| |||||| || ||||||||| |||||||||||||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatgtttgttacaagtttactaaattttatt 32824899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 38964677 - 38964802
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||| ||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||  | ||||||||| |||||||| ||| |||||||     
T  38964677 aagggggtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatgtttgttacaagtttacaaaaatttattcc 38964776  T
Q  198 caggtataaaatattcttgagaatag 223  Q
      |||||||||| ||| || ||||||    
T  38964777 ttggtataaaatgttcctgggaatag 38964802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 13931885 - 13931993
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    ||||||||||||| ||||||||||||| |||||| |  |||||||| |||  |||| ||||| || ||||||||| |||||||||||||||||||  | |    
T  13931885 ggtgtgtttgtttgaagttatatttgtagattcctaggaataaaatcataaaaatacatatgcctatgtttgttacaagtttactaaattttatttccgg 13931984  T
Q  201 gtataaaat 209  Q
    |||||||||    
T  13931985 gtataaaat 13931993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 51445083 - 51445202
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||  ||| |||||  || ||||||||| |||||||||||| |||||||| | ||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatgtttgttacaagtttactaaaatttattctta-gt 51445181  T
Q  203 ataaaatattcttgagaatag 223  Q
    ||||||| ||| || ||||||    
T  51445182 ataaaatgttcctgggaatag 51445202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 13521349 - 13521270
Alignment:
Q  144 aatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||||| |  ||||||||| |||||| ||||||    
T  13521349 aatgatagaaatatacatgtctgtgtttgttacaagtttactaaattttattcacgagtataaaatgttcttgggaatag 13521270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 9011167 - 9011268
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||||||| || |||||   | ||||||||||||| |||||| |||||| ||||| ||| ||||||||||||||||||| || ||||||    
T  9011167 gtttgtttcaagttatattcgtagattcttgaaaataaaatgataggaatatacatgtctatgtttattacaagtttactaaattttattttc-ggtata 9011265  T
Q  206 aaa 208  Q
    |||    
T  9011266 aaa 9011268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 19083104 - 19083214
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||| ||||||| || ||||      |||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||| |    
T  19083104 agggtgtgtttgtttcaaattatattcgtagatttttgggaatacaatgatagaaatatacatgtctatgtttgttataagtttactaaattttattcac 19083203  T
Q  199 aggtataaaat 209  Q
      |||||||||    
T  19083204 gagtataaaat 19083214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 19130992 - 19131102
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||| ||||||| || ||||      |||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||| |    
T  19130992 agggtgtgtttgtttcaaattatattcgtagatttttgggaatacaatgatagaaatatacatgtctatgtttgttataagtttactaaattttattcac 19131091  T
Q  199 aggtataaaat 209  Q
      |||||||||    
T  19131092 gagtataaaat 19131102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 32202327 - 32202393
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatg 162  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| ||||||    
T  32202327 ctaagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatg 32202393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 52699465 - 52699574
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||| ||||||||||||||||||| || ||||||    ||||||||||||| |||| | ||| || ||||||||| ||||||||| |||||||||| |    
T  52699465 agggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatgataggaatacacatgcctatgtttgttacaagtttactgaattttattccc 52699564  T
Q  199 aggtataaaa 208  Q
     |||||||||    
T  52699565 gggtataaaa 52699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 24116338 - 24116443
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    ||||||||||||||| ||||||||||| ||||||  | ||||||| |||||  | |||||||| | ||||||| | |||||||||||||||||||| | |    
T  24116338 ggtgtgtttgtttcaggttatatttgtagattcctgagaataaaacgatag--aaatatatgtttatgtttgtcacaagtttactaaattttattcccgg 24116435  T
Q  201 gtataaaa 208  Q
    ||||||||    
T  24116436 gtataaaa 24116443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 31806759 - 31806852
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||| ||||||  | ||||||||||||| |||||| |||  | |||||||  || ||||||||||||||||||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatgatagaaatatacatgcttatgtttgt--tacgtttactaaattttattctc 31806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 50190762 - 50190874
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| |||||||||||||||| |||| ||||| ||| ||   ||||||||| ||| ||| |||||| ||  |||||||| ||||||||||||||||||||    
T  50190762 taagagtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgcctacgtttgttacaagtttactaaattttattc 50190861  T
Q  197 tcaggtataaaat 209  Q
     | ||||||||||    
T  50190862 ccgggtataaaat 50190874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 11014448 - 11014550
Alignment:
Q  107 tttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataa 206  Q
    ||||||||||||||||| ||| ||||||    ||||||||||||| |||||| |||||| ||||||||| ||||||| |||||| ||||| | | |||||    
T  11014448 tttgtttcaagttatatatgtagattcctgggaataaaatgatagaaatatacatgtctatgtttgttacaagtttaataaattatattcacggatataa 11014547  T
Q  207 aat 209  Q
    |||    
T  11014548 aat 11014550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 47677715 - 47677606
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||  ||||||||||| ||||||    |||||||| |||  |||| |||||| |||||||||||||| ||||||||||||||||  |    
T  47677715 agggtgtgtttgtttcccgttatatttgtggattccggg-aataaaatcataaaaatacatatgtttgtgtttgttataaatttactaaattttatttcc 47677617  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  47677616 gggtataaaat 47677606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 37336453 - 37336567
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||| |||||||||||||||||||||| |||||   ||||||||||||||  |||||| |         |||||| ||||||||||||||||||||||||    
T  37336453 ggtgagtttgtttcaagttatatttgtagattcatgataataaaatgatataaatatacac--------ttgttacaagtttactaaattttattctcag 37336544  T
Q  201 gtataaaatattcttgagaatag 223  Q
     ||||||||||| ||| ||||||    
T  37336545 atataaaatattattgggaatag 37336567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 13440428 - 13440344
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    |||| |||||||| |||||| ||| || ||||||||| || ||||||||||||||||| |  ||||||||| ||| |||||||||    
T  13440428 aatacaatgatagaaatataaatgactatgtttgttagaattttactaaattttattcacgagtataaaatgttcctgagaatag 13440344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 38519059 - 38519171
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| |||||||||||||||||||||||||| ||||      ||||||   |||| |||| | |||  | ||||||||| ||||||||||||||||||||    
T  38519059 taagagtgtgtttgtttcaagttatatttgtagatttttggaaataaatcaatagaaatacagatgcttatgtttgttacaagtttactaaattttattc 38519158  T
Q  197 tcaggtataaaat 209  Q
     ||||||||||||    
T  38519159 ccaggtataaaat 38519171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 16257008 - 16257123
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||| |||||||||||||  ||| |    |||||||| |||  |||||| || ||  ||||| ||| ||||||| ||||||||||||| |    
T  16257008 gggtgtgtttgtttgaagttatatttgtatatttcttggaataaaatcataaaaatatacatttcaatgttttttacaagtttattaaattttattctta 16257107  T
Q  200 ggtataaaatattctt 215  Q
    ||||||||| ||||||    
T  16257108 ggtataaaagattctt 16257123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 1227879 - 1227987
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||| ||| |||||||||| || |||||   | |||||||| |||  |||| ||||| || || |||||| ||||||| ||||||||||| |||    
T  1227879 gggtgtgttttttt-aagttatattcgtagattcttgaaaataaaatcataaaaatacatatgcctatgcttgttacaagtttattaaattttattttca 1227977  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  1227978 ggtataaaat 1227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 46960641 - 46960576
Alignment:
Q  158 atatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||| || ||||||||| |||||||||||||||||||| | |||||||||| ||| || ||||||    
T  46960641 atatgcctatgtttgttacaagtttactaaattttattcccgggtataaaatgttcctgggaatag 46960576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 37261918 - 37261823
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| ||||||||||| |||||||  | ||||||  | |||||||| |||| |||||| |||  | ||||||||| ||||||| ||||||||||||    
T  37261918 ggtgcgtttgtttcaaattatattcatagattcctgagaataaaattatagaaatatacatgcatatgtttgttacaagtttattaaattttattc 37261823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 3939573 - 3939500
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatatt 212  Q
    |||| |||||||| |||||| |||  | ||||||||| |||||| |||||||||||||  |||||| |||||||    
T  3939573 aatagaatgatagaaatatacatgcttatgtttgttacaagtttgctaaattttattcctaggtatgaaatatt 3939500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 127
Target Start/End: Complemental strand, 19094187 - 19094158
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgt 127  Q
    ||||||||||||||||||||||||||||||    
T  19094187 aagggtgtgtttgtttcaagttatatttgt 19094158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 7317449 - 7317348
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||    
T  7317449 actaagggtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatgtttgttacaagtttactaaattttat 7317350  T
Q  195 tc 196  Q
    ||    
T  7317349 tc 7317348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 1554353 - 1554477
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  1554353 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattccc 1554452  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  1554453 gggtataaaatgttcctgggaatag 1554477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 18726619 - 18726742
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| ||    
T  18726619 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccca 18726718  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  18726719 ggtataaaatgttcctgggaatag 18726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 35394462 - 35394347
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||| ||||||||||||||||||||| ||||||| | | |||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||| |    
T  35394462 agggtttgtttgtttcaagttatatttattgattcacgagaataaaatgaaagaaatatatatgtctatgtttgttacaagtttactaaattttattccc 35394363  T
Q  199 aggtataaaatattct 214  Q
     |||||||||| ||||    
T  35394362 gggtataaaatgttct 35394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 33444627 - 33444747
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||  ||||||||||||| ||||||||| ||| |||||||||||||||| | |    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgataaaaatatatatgtctatgtttgttacaag-ttactaaattttattc-ccg 33444724  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| |||||| ||||||    
T  33444725 gtataaaatgttcttgggaatag 33444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 29421493 - 29421601
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||| ||||||||||||||||   | ||||||||||||| ||||||||||| | ||||||||| ||||||| |||||||||||||| ||||    
T  29421493 gtgtttgtttcaaattatatttgttgattcatgagaataaaatgatagaaatatatatgtttatgtttgttacaagtttattaaattttattctcgggta 29421592  T
Q  204 taaaatatt 212  Q
    |||||||||    
T  29421593 taaaatatt 29421601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 35818423 - 35818547
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  35818423 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 35818522  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  35818523 gggtataaaatgttcctgggaatag 35818547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 38364153 - 38364029
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  38364153 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 38364054  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  38364053 gggtataaaatgttcctgggaatag 38364029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 21137134 - 21137241
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    |||||||||||| ||||||||||||||||||||  | |||||||| |||| |||||||||| || ||||||||| |||||||||||||||||||| | ||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatgtttgttacaagtttactaaattttattcccggg 21137233  T
Q  202 tataaaat 209  Q
    ||||||||    
T  21137234 tataaaat 21137241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 26601935 - 26602060
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||| |||||||||||||| ||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  26601935 taaggatgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 26602034  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| |||||| ||||||    
T  26602035 -ctggtataaaatgttcttgggaatag 26602060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 32660930 - 32661056
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| |||||||||||    ||||||||||||| ||| |||||| || ||||||||| ||||||| ||||||||||||    
T  32660930 taagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttattc 32661029  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  32661030 ccgggtataaaatgttcctgggaatag 32661056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 3050074 - 3049957
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| | ||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcccgggtata 3049975  T
Q  206 aaatattcttgagaatag 223  Q
    |||| ||| || ||||||    
T  3049974 aaatgttcctgggaatag 3049957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 12710717 - 12710593
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  12710717 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 12710618  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  12710617 tggtataaaatgttcctgggaatag 12710593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 16313506 - 16313630
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| |||||  || ||||||||| |||||||||||||||||||| |    
T  16313506 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatgtttgttacaagtttactaaattttattccc 16313605  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  16313606 gggtataaaatgttcctgggaatag 16313630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 25837983 - 25837859
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| || ||| || ||||||||| |||||||| ||||||||||| |    
T  25837983 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatgtttgttacaagtttacaaaattttattccc 25837884  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  25837883 gggtataaaatgttcctgggaatag 25837859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 37392545 - 37392669
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||| |||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| |||||||||||| |    
T  37392545 agggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttattccc 37392644  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  37392645 gggtataaaatgttcctgggaatag 37392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 38132736 - 38132860
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||      
T  38132736 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatgtttgttacaagtttactaaaatttattcct 38132835  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  38132836 tggtataaaatgttcctgggaatag 38132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 7931306 - 7931187
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||| |||||||||||    ||||||||||||| ||| ||||||| | |||||||||||||||||||||| |||||||   ||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtatatgtttgttataagtttactaaaatttattccttggta 7931207  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| |||||||||    
T  7931206 taaaatgttcctgagaatag 7931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 10896217 - 10896340
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||| |||||| || ||||||||| || ||||||||| |||||||       
T  10896217 gggtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtttgttacaaatttactaaaatttattcctt 10896316  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  10896317 ggtataaaatgttcctgggaatag 10896340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 40197076 - 40197173
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||| |||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||| | |||||||||||||||||||||| ||||||||    
T  40197076 gggtatgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttgttataagtttactaaaatttattct 40197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 41228713 - 41228823
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||| ||||||   ||||||||| ||| ||| |||||| ||  |||||||| |||||||||||||||||||| |    
T  41228713 agggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgcctacgtttgttacaagtttactaaattttattccc 41228812  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  41228813 gggtataaaat 41228823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 26062219 - 26062106
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| |||||  || ||||||||| |||||||||||| ||||||    
T  26062219 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatgtttgttacaagtttactaaaatttatt 26062120  T
Q  196 ctcaggtataaaat 209  Q
    |   ||||||||||    
T  26062119 ccttggtataaaat 26062106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 18298183 - 18298060
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||| |||||||||||||||||| || ||||||| |   ||||||||||||| ||| |||||  || ||||||||| |||||||||||||||||||| |     
T  18298183 gggtttgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatgtttgttacaagtttactaaattttattcccg 18298084  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  18298083 ggtataaaatgttcctgggaatag 18298060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 34672407 - 34672296
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||||||||||||| ||||| ||||||||||||||  | ||||||||||||  ||||||||||  |   ||| ||| ||||||| |||||||||||||    
T  34672407 aagggtgtgtttgtttgaagttgtatttgttgattcctgaaaataaaatgataaaaatatatatgcttacatttattacaagtttaataaattttattct 34672308  T
Q  198 caggtataaaat 209  Q
    ||| ||||||||    
T  34672307 cagatataaaat 34672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 42755937 - 42755842
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||| |||||||||||    ||||||||||||| ||| |||||| || |||| |||| |||||||||||| |||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgttagttacaagtttactaaaatttattc 42755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 15227029 - 15226912
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||||||| || ||||||    |||||||| |||  |||| |||||| | ||||||||| |||||||||||||||||||  | ||||||    
T  15227029 gtttgtttcaagttatattcgtagattcctctgaataaaatcatataaatacatatgtttatgtttgttacaagtttactaaattttatttccgggtata 15226930  T
Q  206 aaatattcttgagaatag 223  Q
    |||||||| || ||||||    
T  15226929 aaatattcctgcgaatag 15226912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 38437519 - 38437402
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    |||||||| |||||||||||||  |||||  | ||||||| ||||| |||| |||| ||| ||||||||| |||||||| |||||||||| || ||||||    
T  38437519 gtttgttttaagttatatttgtatattcctgaaaataaaacgataggaatacatatatctatgtttgttacaagtttacaaaattttattttcgggtata 38437420  T
Q  206 aaatattcttgagaatag 223  Q
    |||  ||| |||||||||    
T  38437419 aaacgttcctgagaatag 38437402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 5020492 - 5020602
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgat---agcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||||||||||     |||||||||||   || ||||||||||  | ||||| ||| |||||||||||| |||| ||||    
T  5020492 gtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgataggaggaatatatatgcatatgtttcttacaagtttactaaagtttactctc 5020591  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  5020592 gggtataaaat 5020602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 14763970 - 14764054
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||| |||||| |||  | ||||||||  |||||||||||||||||||| | |||||||||| ||| |||||||||    
T  14763970 aataaaatgatagaaatatacatgcatatgtttgtttcaagtttactaaattttattcacgggtataaaatgttcatgagaatag 14764054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 41432804 - 41432715
Alignment:
Q  107 tttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||| |||||||||| || ||||||    ||||||||||||| |||| | |||| | ||||||||| ||||||||||||||||||||    
T  41432804 tttgttttaagttatattcgtggattcctgggaataaaatgataggaatacacatgtttatgtttgttacaagtttactaaattttattc 41432715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 39075663 - 39075568
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| |||||||||| ||||| ||||| ||||   |||||||||||||||| |||||  ||  || |||||||||||| |||| ||||||||||||    
T  39075663 ggtgcgtttgtttcatgttatttttgtagatttttaataataaaatgatagaaatatgcatccctatgtttgttataattttattaaattttattc 39075568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 8635708 - 8635669
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattccca 136  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  8635708 taagagtgtgtttgtttcaagttataattgttgattccca 8635669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 19160808 - 19160863
Alignment:
Q  167 tgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaata 222  Q
    ||||||||| ||||||||||||||| |||| |  |||||||||||||||| |||||    
T  19160808 tgtttgttacaagtttactaaatttcattcccgtgtataaaatattcttgggaata 19160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 133
Target Start/End: Original strand, 31117546 - 31117577
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattc 133  Q
    ||||||||||||||||||||||||||||||||    
T  31117546 gtgtgtttgtttcaagttatatttgttgattc 31117577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 25899702 - 25899608
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||||||||||||||| |||||||||| ||||||    |||||||| |||  |||  || ||||| ||||||||  ||||||| |||||||||||    
T  25899702 ggtgtgtttgtttcaaattatatttgtagattcctgggaataaaatcataaaaatgcatgtgtctatgtttgttgcaagtttattaaattttatt 25899608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 202005 - 201873
Alignment:
Q  91 taaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatt 190  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||    
T  202005 taaaacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaatt 201906  T
Q  191 ttattctcaggtataaaatattcttgagaatag 223  Q
    |||||  | |||||||||||||| || ||||||    
T  201905 ttatttccgggtataaaatattcctgggaatag 201873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 143678 - 143561
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||| |||||||||||||  | ||||||||||||| ||||||||||| |  |||||||| |||||||||||||||||||| | | ||||    
T  143678 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatgtatacgtttgttacaagtttactaaattttattcccggatata 143579  T
Q  206 aaatattcttgagaatag 223  Q
    |||| ||| || ||||||    
T  143578 aaatgttcctgggaatag 143561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 119352 - 119295
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| |||||||| |||||| |||||| ||||||||| ||||||||||||||||||||    
T  119352 aatacaatgatagaaatatacatgtctatgtttgttacaagtttactaaattttattc 119295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 8476304 - 8476431
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| |||||||||||| |||||||||||||||||||    
T  8476304 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctgtgtttgttacaagtttactaaattttatt 8476403  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    | | |||||||||| ||| || ||||||    
T  8476404 cccgggtataaaatgttcctgggaatag 8476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 6231496 - 6231610
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    |||| ||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||    
T  6231496 actaggggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttat 6231595  T
Q  195 tctcaggtataaaat 209  Q
    || | ||||||||||    
T  6231596 tcccgggtataaaat 6231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 24574655 - 24574537
Alignment:
Q  91 taaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatt 190  Q
    |||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||    
T  24574655 taaaactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaatt 24574556  T
Q  191 ttattctcaggtataaaat 209  Q
    ||||||   ||||||||||    
T  24574555 ttattcctgggtataaaat 24574537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 26849096 - 26848970
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  26849096 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 26848997  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  26848996 ccgggtataaaatgttcctgggaatag 26848970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 31435922 - 31436046
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||      
T  31435922 agggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaattttattcct 31436021  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| ||| |||||    
T  31436022 gggtataaaatgttcctgaaaatag 31436046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 40908337 - 40908213
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  40908337 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 40908238  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  40908237 gggtataaaatgttcctgggaatag 40908213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 43132156 - 43132279
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||||||||||||| | | |||||||| |||| |||||||||| || ||||||||| ||||||| ||||||||||| ||    
T  43132156 agggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatgtttgttacaagtttattaaattttattttc 43132255  T
Q  199 aggtataaaatattcttgagaata 222  Q
    | ||||||||| | | ||||||||    
T  43132256 atgtataaaatgtacctgagaata 43132279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 28124436 - 28124545
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||| |     
T  28124436 gggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatgtttgttataagtttactaaattttattcccg 28124535  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  28124536 ggtataaaat 28124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 9320448 - 9320571
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||   | ||||||||| |||||||||||||||||||| |     
T  9320448 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacttatgtttgttacaagtttactaaattttattcccg 9320547  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||||||| || ||||||    
T  9320548 ggtataaaatattcctgggaatag 9320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 18461013 - 18460901
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatat--gtctgtgtttgttataagtttactaaattttattc 196  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||| |||| |||||||||  |||| ||||||||| ||||||||||||||||||||    
T  18461013 agggcgtgtttgtttcaagttatatttgttgtttcctaataatgaaataatagaaatatatatatgtctatgtttgttacaagtttactaaattttattc 18460914  T
Q  197 tcaggtataaaat 209  Q
    |  ||||||||||    
T  18460913 tttggtataaaat 18460901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 53165733 - 53165834
Alignment:
Q  108 ttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaa 207  Q
    |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||||| | | ||||||    
T  53165733 ttgtttcaagttatatttgttgattcccataaataaaatgataggaatatatatgcttatgtttgttacaagtttactaaattttattcccggatataaa 53165832  T
Q  208 at 209  Q
    ||    
T  53165833 at 53165834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 11239119 - 11239243
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  11239119 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 11239218  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  11239219 tggtataaaatgttcctgggaatag 11239243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 20414461 - 20414581
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| ||||||||| |    ||||||||||| | ||| |||||| || |||||||||||| ||||||||||||||||    
T  20414461 ctaagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtttgttataaatttactaaattttatt 20414560  T
Q  196 ctcaggtataaaatattcttg 216  Q
    | | |||||||||| ||||||    
T  20414561 cccgggtataaaatgttcttg 20414581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 44952380 - 44952270
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  44952380 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 44952281  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  44952280 tggtataaaat 44952270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 20297865 - 20297741
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| |||| |||||||      
T  20297865 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatgtttgttacaagtttattaaaatttattcct 20297766  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  20297765 tggtataaaatgttcctgggaatag 20297741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 47114857 - 47114966
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||||    ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |     
T  47114857 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattcccg 47114956  T
Q  200 ggtataaaat 209  Q
     |||||||||    
T  47114957 agtataaaat 47114966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 1099267 - 1099146
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    |||||||||||| |||||||| ||||||||||||   ||||||||||||| ||| |||||  || ||||||||| |||||||||||| |||||||   ||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatgtttgttacaagtttactaaaatttattccttgg 1099168  T
Q  202 tataaaatattcttgagaatag 223  Q
    |||||||| ||| || ||||||    
T  1099167 tataaaatgttcctgggaatag 1099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 31611004 - 31611108
Alignment:
Q  119 tatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgag 218  Q
    |||| ||||||||||||   ||||||||||| | ||| ||||||||| ||||||||| |||||||||||||||||||| | |||||||||| ||| || |    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtttgttacaagtttactaaattttattcccgggtataaaatgttcctggg 31611103  T
Q  219 aatag 223  Q
    |||||    
T  31611104 aatag 31611108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 48339760 - 48339880
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| ||||||||| ||   ||||||||||||  ||| |||||| || ||||||||| |||||||||||| |||||||   |||    
T  48339760 tgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatgtttgttacaagtttactaaaatttattccttggt 48339859  T
Q  203 ataaaatattcttgagaatag 223  Q
    ||||||| ||| || ||||||    
T  48339860 ataaaatgttcatgggaatag 48339880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 33217917 - 33218036
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| |||||| || ||||||||| || |||| |||||||||||| |  |||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttgttacaaatttattaaattttattcccgagta 33218016  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| || ||||||    
T  33218017 taaaatgttcctgggaatag 33218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 12228256 - 12228365
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||| ||  |||| ||||| |||||    ||||||||||||| |||||||||| || ||||| ||| ||||||||||||||||||||||     
T  12228256 gggtgtgtttgttttaaaatatagttgttaattcctgcgaataaaatgatagaaatatatatgcctatgtttattacaagtttactaaattttattctcg 12228355  T
Q  200 ggtataaaat 209  Q
    |||| |||||    
T  12228356 ggtacaaaat 12228365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 26849164 - 26849240
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttact 185  Q
    |||||||||||||||||||||   ||| || ||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  26849164 gtttgtttcaagttatatttg---attaccgataataaaatgatagaaatatatatgtctatgtttgttacaagtttact 26849240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 27094090 - 27093977
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattccca-ataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||| ||||||| ||||||||| ||| | |||||  | || |||||||| | |||||||||| || |||||||||||||||||||| || |||||    
T  27094090 taagggtgtatttgttttaagttatatgtgtaggttcccggaaaaaaaaatgattgaaatatatatgcctatgtttgttataagtttactatatcttatt 27093991  T
Q  196 ctcaggtataaaat 209  Q
    ||| ||||||||||    
T  27093990 ctcgggtataaaat 27093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 6831956 - 6832078
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||| |||||||||| ||||||    |||||||| | |  || | | |||||| ||||||||| |||||||||||||||||||| |    
T  6831956 agggtgtgtttgtttcaacttatatttgtagattcctggaaataaaatcacaaaaa-acacatgtctatgtttgttacaagtttactaaattttattc-c 6832053  T
Q  199 aggtataaaatattcttgagaatag 223  Q
    ||||||||||||||| || ||||||    
T  6832054 aggtataaaatattcctgggaatag 6832078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 43715307 - 43715371
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgt 163  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||| |||||||    
T  43715307 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgt 43715371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 46359984 - 46359900
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||| ||| |||||  || ||||||||| |||||||||||||||||||| | |||||||||| |||||| ||||||    
T  46359984 aataaaatgataggaatgtatatacctatgtttgttacaagtttactaaattttattcccgggtataaaatgttcttgtgaatag 46359900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 32071508 - 32071420
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||| ||||||||||| |||||| | || ||||||||||||| ||||||||    | ||||||||| |||||||||||||||||||    
T  32071508 tgtgtttgtttgaagttatatttattgatttctaaaaataaaatgatagaaatatata----tatgtttgttacaagtttactaaattttatt 32071420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 2565457 - 2565551
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattt 191  Q
    |||||||||||| |||| |||||||||||||||||||  |  |||||||| |||| |||||||||  |||||||||||| ||||||  |||||||    
T  2565457 taagggtgtgttcgttttaagttatatttgttgattcttaggaataaaataatagaaatatatatacctgtgtttgttacaagtttgttaaattt 2565551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 27823306 - 27823249
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  27823306 aataaaatgatagaaatataaatgtctatgtttgctataagtttactaaattttattc 27823249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 33647702 - 33647799
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||| ||||| || ||||| |   ||||||| | ||| |||||| || ||| ||||||||| ||||||||||||||||||||    
T  33647702 agggtgtgtttgtttcaagtaatattcgtagattctcgggaataaaacgttagaaatatacatctctatgtttgttacaagtttactaaattttattc 33647799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 1246912 - 1247011
Alignment:
Q  110 gtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaat 209  Q
    |||| ||| ||||||||||||||| |   ||||||||||||| |||| |||||  | ||||||||| |||||||||||||||||||| || | |||||||    
T  1246912 gtttgaagctatatttgttgattctcgggaataaaatgatagaaatacatatgcttatgtttgttacaagtttactaaattttattcccaagaataaaat 1247011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 28770207 - 28770306
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||| |||||||||||||| || ||||||    ||||||| ||||| |||||  |||||| |||||| || ||||||||||||||| ||||    
T  28770207 taagggtgtgtttctttcaagttatattcgtagattcctgggaataaaaagatagaaatatgcatgtctatgtttggtacaagtttactaaatttgattc 28770306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 10822733 - 10822806
Alignment:
Q  115 aagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaa 188  Q
    |||||||||||||||||| ||   ||||||||||||| | | ||||||||| ||||||||| ||||||||||||    
T  10822733 aagttatatttgttgatttccgggaataaaatgatagaagtgtatatgtctatgtttgttacaagtttactaaa 10822806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 39932562 - 39932621
Alignment:
Q  139 aataaaatgatagcaat--atatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||| |||  |||||||| | ||||||||||||||||||||||||||||||    
T  39932562 aataaaatgatagaaatgtatatatgtttatgtttgttataagtttactaaattttattc 39932621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 40584669 - 40584560
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    |||| ||||||| ||||||||||||| ||||||  | |||||||| |||  |||  |||||||| |||||  || ||||||| ||||||||||| || |     
T  40584669 gtgtatttgttttaagttatatttgtagattcctgagaataaaatcataaaaatgcatatgtctatgttttctacaagtttattaaattttattttcgga 40584570  T
Q  202 tataaaatat 211  Q
    ||||||||||    
T  40584569 tataaaatat 40584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 44534275 - 44534194
Alignment:
Q  115 aagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||  |||| ||  ||||||||||||| |||||| || ||  |||||| |||||||||| ||||||||||||    
T  44534275 aagttatatttgtatattctcaggaataaaatgatagaaatatacatttcaatgtttgctataagtttattaaattttattc 44534194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 28139719 - 28139843
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||| ||||||||||||||||||| ||  ||||  |  ||||||| ||||| |||||| |||  | ||||||||| ||| ||| ||||||||||| ||    
T  28139719 agggtgcgtttgtttcaagttatattcgtatattcttaggaataaaaagatagaaatatacatgcttatgtttgttacaagattagtaaattttattttc 28139818  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     | |||||||  |||||| ||||||    
T  28139819 ggatataaaacgttcttgggaatag 28139843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 28693428 - 28693522
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||  | ||||||| | |||||||  |||  ||||| ||||  | ||||||||||||||  | ||||||||||||    
T  28693428 gtgtgtttgtttcaagttatattcatagattcccgagaataaaaaaataaaaatatgtatgcttatgtttgttataagtcaattaaattttattc 28693522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 12970527 - 12970653
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  12970527 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 12970626  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  12970627 ccgggtataaaatgttcctgggaatag 12970653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 4765556 - 4765683
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| |||||||||||    
T  4765556 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttatt 4765655  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    | | |||||||||| ||| || ||||||    
T  4765656 cccgggtataaaatgttcctgggaatag 4765683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 18412284 - 18412157
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| || ||||||||    ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||    
T  18412284 ctaagggtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttatt 18412185  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    ||| |||||||||| ||| || ||||||    
T  18412184 ctcgggtataaaatgttcctgggaatag 18412157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 29543011 - 29543138
Alignment:
Q  96 ctaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||| |||||||||||    ||||||||||| | ||| ||||||||| ||||||||| |||||||||||||||||||    
T  29543011 ctaagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatgtttgttacaagtttactaaattttatt 29543110  T
Q  196 ctcaggtataaaatattcttgagaatag 223  Q
    | | |||||||||| ||| || ||||||    
T  29543111 cccgggtataaaatgttcctgggaatag 29543138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 555703 - 555815
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||    
T  555703 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttgttacaagtttactaaaatttattc 555802  T
Q  197 tcaggtataaaat 209  Q
       ||||||||||    
T  555803 cttggtataaaat 555815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 19065504 - 19065628
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||  |    
T  19065504 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttatttcc 19065603  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  19065604 gggtataaaatgttcctgggaatag 19065628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 43346895 - 43347002
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    |||||||||||||||||||||||||||| ||||||  | |||||||| |||  |||| |||||| ||||||||||| |||||||||||||||||||| ||    
T  43346895 gggtgtgtttgtttcaagttatatttgtagattcctgaaaataaaatcataaaaatacatatgtatgtgtttgttacaagtttactaaattttattccca 43346994  T
Q  200 ggtataaa 207  Q
    ||||||||    
T  43346995 ggtataaa 43347002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 11855658 - 11855778
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| |||||||||||  | ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| | | |    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcccggat 11855757  T
Q  203 ataaaatattcttgagaatag 223  Q
    ||||||| ||| || ||||||    
T  11855758 ataaaatgttcctgggaatag 11855778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 22935911 - 22936035
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||  ||||||||| |    
T  22935911 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactttattttattccc 22936010  T
Q  199 aggtataaaatattcttgagaatag 223  Q
    ||||||||||| ||| || ||||||    
T  22936011 aggtataaaatgttcctgggaatag 22936035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 27481430 - 27481306
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||||||||| || ||||||      ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||     
T  27481430 aagggtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcc 27481331  T
Q  198 caggtataaaatattcttgagaata 222  Q
    | |||||||||||||| ||||||||    
T  27481330 cgggtataaaatattcctgagaata 27481306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 28602627 - 28602504
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  28602627 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattc-c 28602529  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||  |||||||||    
T  28602528 cggtataaaatgtttctgagaatag 28602504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 42012164 - 42012288
Alignment:
Q  86 ttttataaa-actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttac 184  Q
    ||||||||| ||| ||||||||||||||| ||| ||||||||||||||| |   ||||||||||||| |||| |||||||| ||||||||| || |||||    
T  42012164 ttttataaatacttagggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatagaaatacatatgtctatgtttgttacaaatttac 42012263  T
Q  185 taaattttattctcaggtataaaat 209  Q
    ||||||||||||||  |||||||||    
T  42012264 taaattttattctcgagtataaaat 42012288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 6930714 - 6930588
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagca----atatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||| ||||||||||||||||||||||||  | ||||||||||||| |    |||||||||| | ||||||||| |||||||||||||||||||     
T  6930714 ggtgtgtttatttcaagttatatttgttgattcctgagaataaaatgatagaaatatatatatatgtttatgtttgttacaagtttactaaattttattt 6930615  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
    || | ||||||||||| ||| ||||||    
T  6930614 tcggatataaaatattattgggaatag 6930588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 14206818 - 14206930
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  14206818 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 14206917  T
Q  197 tcaggtataaaat 209  Q
       ||||||||||    
T  14206918 cttggtataaaat 14206930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 6091782 - 6091663
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||  ||| |||||| || ||||||||| |||||||||||| |||||||   ||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatgtttgttacaagtttactaaaatttattccttggta 6091683  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| |||||| ||||||    
T  6091682 taaaatgttcttgggaatag 6091663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 36703945 - 36703822
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||  |   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||       
T  36703945 gggtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatgtttgttacaagtttactaaaatttattcctt 36703846  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  36703845 ggtataaaatgttcctgggaatag 36703822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 32536006 - 32535913
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    |||||||||||| |||||||| |||||||||||||  ||||||||||||| ||| ||||||| | ||||||||| |||||||||||| ||||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtatatgtttatgtttgttacaagtttactaaaatttatt 32535913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 15200547 - 15200655
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||| |||||||||||||||||||| | ||||    | ||||||||||||  ||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  15200547 ggtgcgtttgtttcaagttatatttatagatttttgaaaataaaatgatataaatatatatgtctatgtttgttataaatttattaaattttattctcag 15200646  T
Q  201 gtataaaat 209  Q
    | |||||||    
T  15200647 gcataaaat 15200655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 26637045 - 26637139
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||||||||      ||||||||||||| | ||||||||||| | ||||||| ||||||||||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgatagaattatatatgtctatatttgttacaagtttactaaattttattc 26637139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 27481069 - 27480984
Alignment:
Q  111 tttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||||||||||||||||||    | ||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||    
T  27481069 tttcaagttatatttgttgatttttgagaataaaatgataggaatatgtatgtctatgtttgttacaagtttactaaattttattc 27480984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 8646415 - 8646514
Alignment:
Q  124 ttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| | | |||||||| ||| || ||||||    
T  8646415 ttgttgattcccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattcccggttataaaatgttcctgggaatag 8646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 8406959 - 8406842
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    ||||||||||||||||| |||||||||  | | ||||||||||||| ||| || ||| || | ||||||| |||||| ||||||||||||| | ||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctatatttgttacaagtttgctaaattttattcccgggtata 8406860  T
Q  206 aaatattcttgagaatag 223  Q
    |||| ||| || ||||||    
T  8406859 aaatgttcctgggaatag 8406842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 17251844 - 17251760
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||||||||| |||||| |||| | |||||||||||| |||||||||||||||||||  ||||||||| ||| ||| |||||    
T  17251844 aataaaatgatagaaatatacatgtttatgtttgttataattttactaaattttattctcgagtataaaatgttcatgataatag 17251760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 16720211 - 16720324
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||||||||||||||||| |||||||| || |||||| |  |||||| |||||| |||||| ||   | ||||||||  ||||||||||||||||||| |    
T  16720211 aagggtgtgtttgtttcatgttatattcgtagattcctatgaataaa-tgatagaaatatacatacatatgtttgttgcaagtttactaaattttattat 16720309  T
Q  198 caggtataaaatatt 212  Q
    | |||||||||||||    
T  16720310 cgggtataaaatatt 16720324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 20962659 - 20962553
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||||||||||||||| || |||||     ||||||||||||| |||| |  || || ||||||||| |||||||||||||||||||||| |     
T  20962659 gtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgataggaatacacgtgcctatgtttgttacaagtttactaaattttattctcgga 20962560  T
Q  202 tataaaa 208  Q
    |||||||    
T  20962559 tataaaa 20962553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 40275753 - 40275878
Alignment:
Q  99 agggtgtgtttgttt-caagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||| ||| |||||||||||||| ||||      |||||||| |||  |||| |||||||| ||||||||| |||||| |||||||||||||     
T  40275753 agggtgtgttttttttcaagttatatttgtagatttttgggaataaaattataaaaatacatatgtctatgtttgttacaagtttgctaaattttattcc 40275852  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    ||| ||| |||||||| || ||||||    
T  40275853 cagatatgaaatattcctgggaatag 40275878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 28429759 - 28429676
Alignment:
Q  113 tcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||| || |||||  |  ||||||||||||| |||||| ||| || | ||||||| ||||||||||||||||||||    
T  28429759 tcaagttatattcgtagattcttagaaataaaatgatagaaatatacatgcctatatttgttacaagtttactaaattttattc 28429676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 36978172 - 36978267
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||| ||| ||| ||  ||| |  | ||||||||||||| ||||||||||||| ||||||||| ||  |||| |||||||||||    
T  36978172 ggtgtgtttgtttcaaattacattcgtatatttctgaaaataaaatgatagaaatatatatgtctatgtttgttacaaacttacaaaattttattc 36978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 41783687 - 41783729
Alignment:
Q  167 tgtttgttataagtttactaaattttattctcaggtataaaat 209  Q
    |||||||||||||||||||||||||||||||| | ||||||||    
T  41783687 tgtttgttataagtttactaaattttattctcggatataaaat 41783729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 31583102 - 31583158
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||| ||||| ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  31583102 aataaaacgatagaaatatat-tgtctatgtttgttacaagtttactaaattttattc 31583158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 3913201 - 3913308
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||| |||| |||||||||||||| || |||||     ||||||| ||||| |||||| |||| | ||||| ||| || ||||||||||||||||| |||    
T  3913201 ggtgcgtttatttcaagttatattcgtagattcttgggaataaaacgatagaaatatacatgtgtatgtttattacaaatttactaaattttattc-cag 3913299  T
Q  201 gtataaaat 209  Q
    |||||||||    
T  3913300 gtataaaat 3913308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 830059 - 830115
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||| |||| |||||||||||  | ||||||||| ||||||| |||||||||||    
T  830059 aataaaaagatatcaatatatatgaatatgtttgttacaagtttattaaattttatt 830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 19089718 - 19089814
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    |||| |||||||| |||||||||| ||  |||||    |||||||  |||| |||||  |||| | ||||||||||||||||| |||||||||||||    
T  19089718 ggtgcgtttgttttaagttatattcgtaaattcctgggaataaaaaaatagaaatatgcatgtttatgtttgttataagtttattaaattttattct 19089814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 35348566 - 35348621
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||| ||||| |||||| |||||| ||||||||| |||||||||||||| ||||    
T  35348566 aataaaaagatag-aatatacatgtctatgtttgttacaagtttactaaattgtatt 35348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 39554259 - 39554131
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttat 194  Q
    |||||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||    
T  39554259 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttat 39554160  T
Q  195 tctcaggtataaaatattcttgagaatag 223  Q
    ||   |||||||||| ||| |||||||||    
T  39554159 tccttggtataaaatgttcctgagaatag 39554131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 27248365 - 27248255
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  27248365 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 27248266  T
Q  199 aggtataaaat 209  Q
    |||||||||||    
T  27248265 aggtataaaat 27248255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 11000775 - 11000650
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatat-gtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||||||||| ||||||||||    ||||||||||||  ||||||||| | || ||||||||| ||||||||||||||||||||     
T  11000775 agggtgtgtttgtttcaagttatatatgttgattcctggaaataaaatgatataaatatatatagcctatgtttgttacaagtttactaaattttattcc 11000676  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    | ||||||||||||||||| ||||||    
T  11000675 cgggtataaaatattcttgggaatag 11000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 48160590 - 48160687
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  48160590 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttgttacaagtttactaaattttattc 48160687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 41684021 - 41684117
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| ||||||| ||||||||||| | ||||||||| |||||||||||||||||||    
T  41684021 agggtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatagaaatatatatgtttatgtttgttacaagtttactaaattttatt 41684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 38396370 - 38396489
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||| ||||||||| ||||||||||||   ||||||||||||| ||| ||||||||| |||||| ||||||||||||||||||||||| | ||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttggtataagtttactaaattttattcccgggta 38396469  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| || ||||||    
T  38396470 taaaatgttcctgggaatag 38396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 8419586 - 8419712
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||  |||||||||    
T  8419586 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactttattttattc 8419685  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     |||||||||||| ||| || ||||||    
T  8419686 ccaggtataaaatgttcctgggaatag 8419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 28904185 - 28904295
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||| |||||||| |||||||||||| | ||||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||      
T  28904185 agggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatgtttgttacaagtttactaaaatttattcct 28904284  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  28904285 tggtataaaat 28904295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 33378914 - 33378804
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||      
T  33378914 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcct 33378815  T
Q  199 aggtataaaat 209  Q
     ||||||||||    
T  33378814 gggtataaaat 33378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 48314194 - 48314084
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  48314194 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttagaagtttactaaattttattccc 48314095  T
Q  199 aggtataaaat 209  Q
     | ||||||||    
T  48314094 ggatataaaat 48314084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 27213853 - 27213978
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||     
T  27213853 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcc 27213952  T
Q  198 caggtataaaatattcttgagaatag 223  Q
      |||||||||| ||| || ||||||    
T  27213953 ttggtataaaatgttcctgggaatag 27213978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 44566116 - 44566007
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||| ||   ||||||||||||| ||| ||||||||| ||||||||| ||||||| |||||||||||| |     
T  44566116 gggtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtttgttacaagtttattaaattttattcccg 44566017  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  44566016 ggtataaaat 44566007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 9946989 - 9947113
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||| |||||||| || |||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  9946989 agggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 9947088  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  9947089 gggtataaaatgttcctgggaatag 9947113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 11330065 - 11329941
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  11330065 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 11329966  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  11329965 tggtataaaatgttcctgggaatag 11329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 35488188 - 35488312
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||||||| | ||| |||||| || ||||||||| |||||||||||||||||||| |    
T  35488188 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactaaattttattccc 35488287  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  35488288 gggtataaaatgttcctgggaatag 35488312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 9814217 - 9814337
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||    ||||||||||| |||||||||||||||||||| |    
T  9814217 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtata----tgtgtttgttacaagtttactaaattttattccc 9814312  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  9814313 gggtataaaatgttcctgggaatag 9814337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 40212960 - 40212837
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| |||||||||| |   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||       
T  40212960 gggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattccgg 40212861  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  40212860 ggtataaaatgttcctgggaatag 40212837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 27419221 - 27419347
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||| ||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  27419221 taagggtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 27419320  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
       |||||||||| ||| || ||||||    
T  27419321 cttggtataaaatgttcctgggaatag 27419347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 45265049 - 45265171
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| |||||||||| |   ||||||||||| | ||| |||||| || |||||||||||||||||||||||||||||  | |    
T  45265049 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatgtttgttataagtttactaaattttatttccgg 45265148  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| ||| || ||||||    
T  45265149 gtataaaatgttcctgggaatag 45265171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 38544265 - 38544156
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||| ||| | |||||||||||||||||| |     
T  38544265 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatgtttattacaggtttactaaattttattcccg 38544166  T
Q  200 ggtataaaat 209  Q
    ||||||||||    
T  38544165 ggtataaaat 38544156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 16825353 - 16825477
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||| ||||| ||||| |  ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||      
T  16825353 agggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattcct 16825452  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  16825453 tggtataaaatgttcctgggaatag 16825477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 45045698 - 45045574
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||| |||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| |||||||||||  |    
T  45045698 agggtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttatttcc 45045599  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  45045598 gggtataaaatgttcctgggaatag 45045574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 48341430 - 48341311
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||| |||||||||||| | |||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttattaaattttattc-ccggt 48341332  T
Q  203 ataaaatattcttgagaatag 223  Q
    ||||||| ||| || ||||||    
T  48341331 ataaaatgttcctgggaatag 48341311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 18824224 - 18824093
Alignment:
Q  93 aaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaa-tatatatgtctgtgtttgttataagtttactaaattt 191  Q
    ||||||||||||||||||||||||||| ||||||||||||      ||||||||||||| || |||||||| || ||||||||| ||||| |||||||||    
T  18824224 aaactaagggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatagaaaatatatatgcctatgtttgttacaagttcactaaattt 18824125  T
Q  192 tattctcaggtataaaatattcttgagaatag 223  Q
    ||||| | |||||||||| || ||| ||||||    
T  18824124 tattcccgggtataaaatgtttttgggaatag 18824093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 25924634 - 25924733
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    ||||||| |||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  25924634 taagggtatgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 25924733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 43949315 - 43949220
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| |||||||||||| |||||||    
T  43949315 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaaatttattc 43949220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 45449009 - 45448890
Alignment:
Q  104 gtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggta 203  Q
    ||||||||||||||||||| || ||||||| |   ||||||||||||| ||| || |||||| ||||||||| |||||||||||||||||||| | ||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtagatgtctatgtttgttacaagtttactaaattttattcccgggta 45448910  T
Q  204 taaaatattcttgagaatag 223  Q
    |||||| ||| || ||||||    
T  45448909 taaaatgttcctgggaatag 45448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 41632365 - 41632479
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| |||||||||||  | ||||||||||||| ||| |||||| || ||||| ||| |||||||||||| |||||||   |    
T  41632365 ggtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatgtttattacaagtttactaaaatttattccttg 41632464  T
Q  201 gtataaaatattctt 215  Q
    ||||||||| |||||    
T  41632465 gtataaaatgttctt 41632479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 47246064 - 47246181
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgata--gcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||| ||||||||||| |||||||||| |||||  |  ||||||||||||  | ||||||||| ||| ||||||||| ||||||||| |||||||||||    
T  47246064 gggtgcgtttgtttcaaattatatttgtagattcttagaaataaaatgatatagaaatatatatttctatgtttgttacaagtttactgaattttattct 47246163  T
Q  198 caggtataaaatattctt 215  Q
    |||||||||||| |||||    
T  47246164 caggtataaaatgttctt 47246181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 25098142 - 25098017
Alignment:
Q  98 aagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattct 197  Q
    ||||||||||||||||||||||||| || ||||||  |   ||||||||||||| ||| |||||| |  ||||||||| |||||||||||||||||||      
T  25098142 aagggtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcccatgtttgttacaagtttactaaattttatttc 25098043  T
Q  198 caggtataaaatattcttgagaatag 223  Q
    | |||||||||| ||| || ||||||    
T  25098042 cgggtataaaatgttcctgggaatag 25098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 45723277 - 45723216
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatg 162  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  45723277 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatg 45723216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 25045617 - 25045740
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||||||||||||||     | ||||| ||||| ||||||||||  | ||||||||| |||||||||||||||||||| |    
T  25045617 agggtgtgtttgtttcaagttatatttgttgattctgggga-taaaaagataggaatatatatgcatatgtttgttacaagtttactaaattttattccc 25045715  T
Q  199 aggtataaaatattcttgagaatag 223  Q
      ||||||||| ||| || ||||||    
T  25045716 gagtataaaatgttcctgggaatag 25045740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 6656226 - 6656335
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    |||||||||||||||||||||||||||||||      ||||||||||||  |||||||||  || |||||||||||||||||||||| |||||| ||  |    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatgtttgttataagtttactaaa-tttattttcgag 6656324  T
Q  202 tataaaatatt 212  Q
    |||||||||||    
T  6656325 tataaaatatt 6656335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 44820323 - 44820216
Alignment:
Q  102 gtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||||||||||||| |||||||||  ||  ||||||||||||| ||| ||| ||| ||||||||||| | ||||| |||| |||||||   ||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgtatttgtatgtgtttgttacatgtttattaaaatttattccttgg 44820224  T
Q  202 tataaaat 209  Q
    ||||||||    
T  44820223 tataaaat 44820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 10902689 - 10902745
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttatt 195  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||    
T  10902689 aataaaatgatagaaatatacatgtctatgtttgttacaagtttactaaattttatt 10902745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 34930466 - 34930590
Alignment:
Q  101 ggtgtgtttgtttcaa-gttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgttt-gttataagtttactaaattttattctc 198  Q
    |||||||||||||||| |||||| |||||||||||    ||||||||||||| ||| |||||| || ||||| |||| |||||||||||| |||||||      
T  34930466 ggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgttttgttacaagtttactaaaatttattcct 34930565  T
Q  199 aggtataaaatattcttgagaatag 223  Q
     |||||||||| ||| || ||||||    
T  34930566 tggtataaaatgttcctgggaatag 34930590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 31921743 - 31921809
Alignment:
Q  95 actaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatg 162  Q
    |||||||||||||||||||||||||||||||||| ||| |  | ||||||||||||| ||||||||||    
T  31921743 actaagggtgtgtttgtttcaagttatatttgttcatttcgga-aataaaatgatagaaatatatatg 31921809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 43445890 - 43446005
Alignment:
Q  107 tttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataa 206  Q
    ||||||||||||||||||| | |||||     |||||||| |||  ||| |||||| || | ||||||||||||||||||||||||||||||   |||||    
T  43445890 tttgtttcaagttatatttatagattcttgcgaataaaattataaaaatgtatatgcctatatttgttataagtttactaaattttattctcgaatataa 43445989  T
Q  207 aatattcttgagaata 222  Q
    ||| ||| ||||||||    
T  43445990 aatgttcatgagaata 43446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 30685993 - 30686115
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||||||||||||||||||||| |||| |||||     |||||||| |||  || ||| |||  | ||||||||| |||||||||||||||||||| | |    
T  30685993 ggtgtgtttgtttcaagttataattgtagattcgttggaataaaatcataaaaacatacatgcatatgtttgttacaagtttactaaattttattcccgg 30686092  T
Q  201 gtataaaatattcttgagaatag 223  Q
    ||||||||| ||| || ||||||    
T  30686093 gtataaaatgttcatgggaatag 30686115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 5543170 - 5543254
Alignment:
Q  139 aataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    ||||||| ||||  |||||| |||| | ||||||||| ||||||||||||||||||||||  ||||||||  |||||| ||||||    
T  5543170 aataaaacgatataaatatacatgtttatgtttgttacaagtttactaaattttattctctcgtataaaactttcttgggaatag 5543254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 6656476 - 6656563
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattt 191  Q
    ||||||||||||||||||||||||||||||      ||| ||||||||  |||||||||| || ||||||||| |||||||||||||||    
T  6656476 tgtgtttgtttcaagttatatttgttgatttttggaaat-aaatgatatgaatatatatgcctatgtttgttacaagtttactaaattt 6656563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 45723167 - 45723097
Alignment:
Q  153 aatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataaaatattcttgagaatag 223  Q
    |||||||||| || ||||||| | |||||||||||||||||||| |  ||||||||| |||||| ||||||    
T  45723167 aatatatatgcctatgtttgtcacaagtttactaaattttattcccgagtataaaatgttcttgggaatag 45723097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 31598742 - 31598640
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtata 205  Q
    |||||||||||||||||||  | ||||||  | ||||||| ||||| |||| | |||  | | ||||||| |||||||||||||||||||   |||||||    
T  31598742 gtttgtttcaagttatattcatagattcctgaaaataaaacgatagaaatacaaatgcttatatttgttacaagtttactaaattttattacaaggtata 31598643  T
Q  206 aaa 208  Q
    |||    
T  31598642 aaa 31598640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 19156685 - 19156637
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatag 151  Q
    |||||||||||||||||||||||||  |||  ||| |||||||||||||    
T  19156685 tgtgtttgtttcaagttatatttgtatattttcaagaataaaatgatag 19156637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 20756084 - 20756036
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatag 151  Q
    |||||||||||||||||||||||||  |||  ||| |||||||||||||    
T  20756084 tgtgtttgtttcaagttatatttgtatattttcaagaataaaatgatag 20756036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 6705764 - 6705888
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    |||||||||||||||||||||||||||||||||||     ||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||      
T  6705764 agggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatgtttgttacaagtttactaaattttattcct 6705863  T
Q  199 aggtataaaatattcttgagaatag 223  Q
    ||||||||||| ||| || ||||||    
T  6705864 aggtataaaatgttcctgggaatag 6705888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 2657774 - 2657648
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||  || ||||||||| ||||||||||||||||||||    
T  2657774 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatgtttgttacaagtttactaaattttattc 2657675  T
Q  197 tcaggtataaaatattcttgagaatag 223  Q
     | |||||||||| ||| || ||||||    
T  2657674 ccgggtataaaatgttcctgggaatag 2657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 16968989 - 16968887
Alignment:
Q  107 tttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtataa 206  Q
    |||||||||||||||| |||||||||||  | ||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatgtttgttacaagtttactaaattttattctcgggtataa 16968890  T
Q  207 aat 209  Q
    |||    
T  16968889 aat 16968887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 7053567 - 7053679
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  7053567 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattc 7053666  T
Q  197 tcaggtataaaat 209  Q
       ||||||||||    
T  7053667 ctgggtataaaat 7053679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 1317089 - 1316966
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctca 199  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||| | ||| |||||| || ||||||||| |||||||||  ||||||||| ||    
T  1317089 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttgttacaagtttactttattttattccca 1316990  T
Q  200 ggtataaaatattcttgagaatag 223  Q
    |||||||||| ||| || ||||||    
T  1316989 ggtataaaatgttcctgggaatag 1316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 7344072 - 7344206
Alignment:
Q  89 tataaaactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaa 188  Q
    ||||| |||||||||||||| ||||||| ||||| ||||  ||| || | ||||||||||||| ||| |||||| || | ||||||| ||||||||||||    
T  7344072 tataacactaagggtgtgttcgtttcaaattataattgtaaatttccgagaataaaatgataggaatgtatatgcctatatttgttacaagtttactaaa 7344171  T
Q  189 ttttattctcaggtataaaatattcttgagaatag 223  Q
    |||||||| |||||||||||| ||| || ||||||    
T  7344172 ttttattcccaggtataaaatgttcctgggaatag 7344206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 14171085 - 14170988
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||||| || |||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||||||||||    
T  14171085 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatgtttgttacaagtttactaaattttattc 14170988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 8029407 - 8029316
Alignment:
Q  97 taagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaa 188  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| |||||| || ||||||||| ||||||||||||    
T  8029407 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttgttacaagtttactaaa 8029316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 345833 - 345939
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataa-taaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg 201  Q
    ||||||||||| |||||||||| || |||||| |  || ||||||||||| |||| | |||||| ||||||||| |||||||||||||||||||||| |     
T  345833 tgtgtttgttttaagttatattcgtagattcctaggaaataaaatgataggaatacacatgtctatgtttgttacaagtttactaaattttattctcgga 345932  T
Q  202 tataaaa 208  Q
    |||||||    
T  345933 tataaaa 345939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 18897989 - 18897883
Alignment:
Q  103 tgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggt 202  Q
    |||||||||||||||||||| ||||||||||||   |||||| |||||| ||| |||||| || ||||||||| ||||||| |||| |||||||   |||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatgtttgttacaagtttattaaaatttattccttggt 18897890  T
Q  203 ataaaat 209  Q
    |||||||    
T  18897889 ataaaat 18897883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 9760376 - 9760493
Alignment:
Q  106 gtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcagg-tat 204  Q
    |||||||||||||||| ||||| || ||   | ||||||||||| | | |||| ||| || | ||||||||||||||||||||||||||| ||||| |||    
T  9760376 gtttgtttcaagttatctttgtagactcttgagaataaaatgatcgaattatacatgcctatttttgttataagtttactaaattttatt-tcaggatat 9760474  T
Q  205 aaaatattcttgagaatag 223  Q
    ||||| ||| |||||||||    
T  9760475 aaaatgttcatgagaatag 9760493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 21008035 - 21008120
Alignment:
Q  111 tttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattc 196  Q
    |||||||||||||||||||||| |    ||||||||||||  |||||||||| || | ||||||| | ||||||||||||||||||    
T  21008035 tttcaagttatatttgttgatttctgggaataaaatgataaaaatatatatgcctctatttgttacaggtttactaaattttattc 21008120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 3869582 - 3869481
Alignment:
Q  94 aactaagggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaatttta 193  Q
    |||||||||||||||||||||||||||| ||||| |||| |    ||||||||||||| ||||| |||  ||  |||||||| | ||| | |||||||||    
T  3869582 aactaagggtgtgtttgtttcaagttatttttgtagatttctgggaataaaatgatagaaatatgtattactacgtttgttaaatgttcattaaatttta 3869483  T
Q  194 tt 195  Q
    ||    
T  3869482 tt 3869481  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 10246222 - 10246257
Alignment:
Q  100 gggtgtgtttgtttcaagttatatttgttgattccc 135  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10246222 gggtgtgtttgtttcaagttataattgttgattccc 10246257  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 14781687 - 14781729
Alignment:
Q  167 tgtttgttataagtttactaaattttattctcaggtataaaat 209  Q
    ||||||||| ||||||||||||||||||||  |||||||||||    
T  14781687 tgtttgttacaagtttactaaattttattcctaggtataaaat 14781729  T

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Target: scaffold0702 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 3564 - 3688
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||||||| |||| | |  |||||||| |||  |||||||||| || ||||||||| |||||||||||||||||||| |    
T  3564 agggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatgtttgttacaagtttactaaattttattccc 3663  T
Q  199 aggtataaaatattcttgagaatag 223  Q
      ||||||||| ||| || ||||||    
T  3664 gagtataaaatgttcctgggaatag 3688  T

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Target: scaffold0662 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 4540 - 4416
Alignment:
Q  99 agggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctc 198  Q
    ||||||||||||||||||||||||||||| |||| | |  |||||||| |||  |||||||||| || ||||||||| |||||||||||||||||||| |    
T  4540 agggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatgtttgttacaagtttactaaattttattccc 4441  T
Q  199 aggtataaaatattcttgagaatag 223  Q
      ||||||||| ||| || ||||||    
T  4440 gagtataaaatgttcctgggaatag 4416  T

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Target: scaffold0189 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 28957 - 29075
Alignment:
Q  105 tgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcaggtat 204  Q
    |||||||||||||||||| |||||||||  |   ||||||||||||| ||| |||||| || ||||||||| |||||||||||||||||||| | |||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatgtttgttacaagtttactaaattttattcccgggtat 29056  T
Q  205 aaaatattcttgagaatag 223  Q
    ||||| ||| || ||||||    
T  29057 aaaatgttcctgggaatag 29075  T

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Target: scaffold0238 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 23297 - 23418
Alignment:
Q  101 ggtgtgtttgtttcaagttatatttgttgattcccaataataaaatgatagcaatatatatgtctgtgtttgttataagtttactaaattttattctcag 200  Q
    |||| |||||||| || |||||||||| |||| |  | |||||||| |||| |||||| |||||| ||||||||| |||||||||||||||||||| |      
T  23297 ggtgcgtttgttttaaattatatttgtagatttctgagaataaaattatagaaatatacatgtctatgtttgttacaagtttactaaattttattcacga 23396  T
Q  201 gtataaaatattcttgagaata 222  Q
    ||||||||||||| || |||||    
T  23397 gtataaaatattcctgggaata 23418  T

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