View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9427_low_8 (Length: 502)
Name: NF9427_low_8
Description: NF9427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9427_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 477; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 1 - 485
Target Start/End: Complemental strand, 43451685 - 43451201
Alignment:
| Q |
1 |
tctggcgagtgataggacaagttatgttctctctattaaaccattcctcaatagctttacgttcatatgtctgaccagtctcaagagtcactggatcatc |
100 |
Q |
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| T |
43451685 |
tctggcgagtgataggacaagttatgttctctctattaaaccattcctcaatagctttacgttcatatgtctgaccagtctcaagagtcactggatcatc |
43451586 |
T |
|
| Q |
101 |
aaatatgttactggttattggacagacgaagtctttaggaggtgtttgtttcccacttccatgtggcggcgtgttttcatagtctgccattggataatct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43451585 |
aaatatgttactggttattggacagacgaagtctttaggaggtgtttgtttcccacttccatgtggcggcgtgttttcatagtctgccattggataatct |
43451486 |
T |
|
| Q |
201 |
ggggagctaggagcaggaagaatccaagttaaagaaaatgtatcagacaacaaaatattgaagaatggttttttaatatacgtaccccctggattctttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43451485 |
ggggagctaggagcaggaagaatccaagttaaagaaaatgcatcagacaacaaaatattgaagaatggttttttaatatacgtaccccctggattctttg |
43451386 |
T |
|
| Q |
301 |
aagatggtttgaatttgttccttgttttggctttggctttgtcgaggctccaacaatgctacatttttgtctttttcctacaggacatattcatcactta |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43451385 |
aagatggtttgaatttgttccttgttttggctttggctttgtcgaggctccaacaatgctacatttttgtctttttcctacaggacatattcatcactta |
43451286 |
T |
|
| Q |
401 |
gcactaaaaaactaaaacagcaagcatagaaaattcagtcctcatcggttttcccgtttcttagtggcatcaattacctcatttt |
485 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
43451285 |
gcactaaaaaactaaaacagcaagcatagaaaattcagtcctcattggttttcccgtttcttagtggcatcaattacctcatttt |
43451201 |
T |
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