View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9428_low_30 (Length: 250)
Name: NF9428_low_30
Description: NF9428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9428_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 31173302 - 31173428
Alignment:
| Q |
124 |
caagataaacttcaatacaaattagaaaacaaggaaatgagataattaaattaaaaagatgatcaatagtgtttgaaa---------gaaaaagttatga |
214 |
Q |
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| T |
31173302 |
caagataaacttcaattcaaattagaaaacaacgaaatgagataattaaattaaaaagatgatcaataatgtttgaaagcttaatttgaaaaagttatga |
31173401 |
T |
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| Q |
215 |
atgaatgattccatgtcaaagaattat |
241 |
Q |
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| T |
31173402 |
atgaatgattccatgtcaaagaattat |
31173428 |
T |
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