View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9428_low_33 (Length: 234)

Name: NF9428_low_33
Description: NF9428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9428_low_33
NF9428_low_33
[»] chr3 (48 HSPs)
chr3 (27-198)||(24842398-24842569)
chr3 (28-202)||(54356269-54356444)
chr3 (32-195)||(11633068-11633230)
chr3 (28-187)||(8708018-8708179)
chr3 (28-187)||(9059905-9060066)
chr3 (28-187)||(10332612-10332771)
chr3 (28-202)||(54981887-54982061)
chr3 (27-202)||(47567548-47567725)
chr3 (28-187)||(10297135-10297295)
chr3 (28-187)||(21388347-21388507)
chr3 (38-193)||(10297423-10297578)
chr3 (27-193)||(45586099-45586266)
chr3 (74-195)||(23027509-23027630)
chr3 (36-187)||(46515033-46515186)
chr3 (27-202)||(7433513-7433688)
chr3 (32-115)||(26167886-26167973)
chr3 (27-123)||(24485585-24485682)
chr3 (28-123)||(10333101-10333197)
chr3 (29-123)||(42583594-42583690)
chr3 (32-193)||(54585755-54585917)
chr3 (28-187)||(10316973-10317131)
chr3 (32-121)||(40285036-40285126)
chr3 (51-187)||(34794397-34794536)
chr3 (32-167)||(12101065-12101201)
chr3 (28-186)||(3942503-3942665)
chr3 (32-202)||(30498351-30498521)
chr3 (28-186)||(54142993-54143152)
chr3 (28-121)||(53877641-53877735)
chr3 (28-121)||(54981599-54981693)
chr3 (28-116)||(21459614-21459703)
chr3 (27-123)||(44077791-44077890)
chr3 (28-123)||(26760565-26760661)
chr3 (82-194)||(7335646-7335757)
chr3 (133-202)||(10334292-10334361)
chr3 (43-193)||(10317246-10317396)
chr3 (39-102)||(33832809-33832873)
chr3 (32-123)||(13207887-13207980)
chr3 (41-118)||(3781404-3781485)
chr3 (41-118)||(3821408-3821489)
chr3 (32-88)||(3789734-3789791)
chr3 (27-98)||(47567774-47567846)
chr3 (132-186)||(10334483-10334537)
chr3 (40-115)||(55158089-55158165)
chr3 (34-123)||(1476732-1476822)
chr3 (43-123)||(2788442-2788523)
chr3 (71-119)||(3827285-3827333)
chr3 (32-85)||(17666119-17666174)
chr3 (32-64)||(43185313-43185345)
[»] chr8 (45 HSPs)
chr8 (28-202)||(35308054-35308231)
chr8 (28-194)||(6007671-6007837)
chr8 (29-180)||(40737426-40737578)
chr8 (27-187)||(1030379-1030542)
chr8 (71-194)||(1153622-1153744)
chr8 (28-123)||(5424770-5424867)
chr8 (28-181)||(15199729-15199882)
chr8 (28-123)||(27963954-27964050)
chr8 (28-194)||(27881312-27881479)
chr8 (28-194)||(28021493-28021660)
chr8 (28-117)||(13916532-13916622)
chr8 (28-181)||(28827969-28828125)
chr8 (28-202)||(17072895-17073073)
chr8 (28-119)||(27917535-27917627)
chr8 (28-202)||(17575197-17575376)
chr8 (27-112)||(28022358-28022444)
chr8 (32-202)||(28022547-28022719)
chr8 (28-123)||(5424485-5424580)
chr8 (27-112)||(27964813-27964899)
chr8 (32-100)||(342700-342769)
chr8 (32-112)||(27882183-27882264)
chr8 (32-202)||(27882367-27882539)
chr8 (27-123)||(40796176-40796275)
chr8 (28-178)||(17073286-17073437)
chr8 (28-178)||(17574833-17574984)
chr8 (33-193)||(27965012-27965175)
chr8 (28-123)||(5765365-5765464)
chr8 (28-123)||(5764880-5764976)
chr8 (28-123)||(32693545-32693641)
chr8 (32-187)||(32795386-32795542)
chr8 (39-100)||(32855139-32855202)
chr8 (32-118)||(45182959-45183043)
chr8 (28-96)||(6008028-6008097)
chr8 (33-119)||(35102881-35102961)
chr8 (27-100)||(28152464-28152538)
chr8 (32-99)||(24981511-24981579)
chr8 (46-123)||(339872-339952)
chr8 (71-116)||(8377048-8377093)
chr8 (37-86)||(13638079-13638128)
chr8 (37-86)||(13738492-13738541)
chr8 (28-68)||(4443963-4444003)
chr8 (29-67)||(8376194-8376232)
chr8 (71-100)||(1580322-1580351)
chr8 (32-89)||(11850533-11850590)
chr8 (39-91)||(29475215-29475268)
[»] chr2 (37 HSPs)
chr2 (28-195)||(3256102-3256272)
chr2 (28-202)||(42676465-42676641)
chr2 (40-193)||(30668856-30669010)
chr2 (28-202)||(21479406-21479580)
chr2 (32-194)||(40662677-40662839)
chr2 (28-181)||(14787201-14787355)
chr2 (28-187)||(43968494-43968652)
chr2 (40-202)||(30666273-30666436)
chr2 (40-202)||(30620565-30620727)
chr2 (40-202)||(30623186-30623348)
chr2 (28-195)||(15458946-15459114)
chr2 (28-193)||(7074819-7074984)
chr2 (40-116)||(30632215-30632292)
chr2 (30-123)||(43004896-43004994)
chr2 (31-202)||(39844128-39844302)
chr2 (32-118)||(43968210-43968297)
chr2 (28-123)||(7495584-7495679)
chr2 (28-202)||(42679340-42679512)
chr2 (34-123)||(1826762-1826852)
chr2 (34-181)||(20612700-20612847)
chr2 (32-119)||(9420261-9420350)
chr2 (32-100)||(3196995-3197064)
chr2 (27-181)||(18296828-18296981)
chr2 (40-202)||(34454177-34454340)
chr2 (52-123)||(45654955-45655027)
chr2 (32-94)||(38722851-38722914)
chr2 (28-93)||(21479209-21479275)
chr2 (28-112)||(36950336-36950421)
chr2 (145-202)||(41148992-41149049)
chr2 (33-100)||(932624-932692)
chr2 (134-182)||(30632304-30632352)
chr2 (134-193)||(34453815-34453874)
chr2 (71-181)||(41347253-41347363)
chr2 (32-88)||(12619104-12619161)
chr2 (71-115)||(31667564-31667608)
chr2 (135-187)||(38722943-38722995)
chr2 (35-110)||(45655127-45655202)
[»] chr5 (37 HSPs)
chr5 (27-195)||(1349654-1349826)
chr5 (32-193)||(19134763-19134925)
chr5 (28-123)||(35040403-35040500)
chr5 (43-187)||(19135030-19135177)
chr5 (28-181)||(28794001-28794155)
chr5 (28-192)||(5246513-5246677)
chr5 (39-187)||(25458459-25458608)
chr5 (28-194)||(4727783-4727950)
chr5 (28-123)||(5249349-5249445)
chr5 (28-120)||(2211246-2211339)
chr5 (32-153)||(6429456-6429579)
chr5 (27-117)||(35040983-35041074)
chr5 (28-117)||(35781368-35781458)
chr5 (27-101)||(38184290-38184364)
chr5 (27-101)||(38213993-38214067)
chr5 (28-177)||(40591314-40591461)
chr5 (40-181)||(35039670-35039813)
chr5 (38-115)||(43582984-43583060)
chr5 (32-123)||(12545884-12545977)
chr5 (32-202)||(20515209-20515379)
chr5 (32-123)||(34383382-34383474)
chr5 (27-104)||(35040153-35040231)
chr5 (27-113)||(1349239-1349326)
chr5 (28-86)||(35781642-35781701)
chr5 (32-100)||(38494500-38494570)
chr5 (132-182)||(25413554-25413604)
chr5 (93-193)||(17367498-17367599)
chr5 (32-100)||(19950742-19950811)
chr5 (132-193)||(35039443-35039504)
chr5 (37-181)||(18585688-18585826)
chr5 (134-187)||(6537984-6538037)
chr5 (33-100)||(19170284-19170348)
chr5 (27-68)||(35781907-35781948)
chr5 (132-187)||(1349962-1350017)
chr5 (62-122)||(7293427-7293488)
chr5 (90-123)||(35781213-35781246)
chr5 (32-68)||(9127252-9127288)
[»] chr4 (51 HSPs)
chr4 (28-202)||(44886171-44886347)
chr4 (27-202)||(54175833-54176009)
chr4 (28-202)||(19298433-19298611)
chr4 (28-187)||(41692433-41692593)
chr4 (28-202)||(7238810-7238984)
chr4 (29-181)||(2494017-2494170)
chr4 (28-200)||(50715675-50715847)
chr4 (37-202)||(5028893-5029059)
chr4 (28-157)||(9519024-9519148)
chr4 (32-181)||(11125965-11126115)
chr4 (28-157)||(39136020-39136150)
chr4 (27-186)||(49897287-49897448)
chr4 (32-120)||(53130855-53130944)
chr4 (28-123)||(41103999-41104094)
chr4 (40-173)||(4780602-4780735)
chr4 (27-123)||(29100821-29100921)
chr4 (28-202)||(43495825-43496007)
chr4 (28-187)||(660168-660326)
chr4 (32-118)||(13222184-13222272)
chr4 (71-187)||(24738973-24739089)
chr4 (92-202)||(27814400-27814510)
chr4 (32-202)||(12928554-12928725)
chr4 (28-97)||(27838986-27839057)
chr4 (32-123)||(29618243-29618335)
chr4 (71-123)||(33802970-33803022)
chr4 (32-123)||(36889670-36889762)
chr4 (32-123)||(42314420-42314512)
chr4 (71-189)||(42815901-42816018)
chr4 (32-120)||(19299936-19300025)
chr4 (36-123)||(7070475-7070563)
chr4 (28-68)||(24739120-24739160)
chr4 (43-117)||(11125267-11125342)
chr4 (52-189)||(29993344-29993478)
chr4 (79-190)||(49867154-49867265)
chr4 (27-97)||(54806864-54806935)
chr4 (148-202)||(45031070-45031124)
chr4 (32-95)||(2494586-2494656)
chr4 (52-187)||(6046349-6046487)
chr4 (32-116)||(7770231-7770317)
chr4 (32-100)||(42882045-42882114)
chr4 (32-99)||(28451662-28451729)
chr4 (151-202)||(45132973-45133024)
chr4 (132-175)||(53140256-53140299)
chr4 (32-123)||(18415473-18415566)
chr4 (34-122)||(46255234-46255326)
chr4 (32-100)||(17554802-17554871)
chr4 (36-88)||(32640758-32640811)
chr4 (48-80)||(6046696-6046728)
chr4 (28-60)||(16436053-16436085)
chr4 (32-76)||(19300399-19300443)
chr4 (132-187)||(36638538-36638591)
[»] scaffold0016 (2 HSPs)
scaffold0016 (28-195)||(205245-205412)
scaffold0016 (28-195)||(105998-106165)
[»] chr1 (48 HSPs)
chr1 (29-195)||(43325882-43326049)
chr1 (28-202)||(17054225-17054400)
chr1 (28-202)||(47794977-47795150)
chr1 (28-202)||(6844461-6844636)
chr1 (28-202)||(11981711-11981884)
chr1 (28-202)||(24686191-24686365)
chr1 (28-182)||(49243777-49243932)
chr1 (28-202)||(47795354-47795527)
chr1 (29-202)||(47795935-47796109)
chr1 (71-202)||(39842807-39842939)
chr1 (29-193)||(48738494-48738658)
chr1 (71-195)||(24705406-24705530)
chr1 (28-194)||(26271931-26272098)
chr1 (28-155)||(33674978-33675106)
chr1 (71-195)||(47793050-47793174)
chr1 (27-193)||(12016839-12017008)
chr1 (28-202)||(49480159-49480334)
chr1 (32-202)||(42429596-42429769)
chr1 (28-202)||(33241077-33241252)
chr1 (28-187)||(52404104-52404268)
chr1 (28-202)||(45807979-45808157)
chr1 (27-123)||(42834906-42835001)
chr1 (27-193)||(47796285-47796454)
chr1 (97-202)||(10338205-10338311)
chr1 (32-168)||(43114911-43115048)
chr1 (28-202)||(6941353-6941531)
chr1 (32-193)||(8795303-8795467)
chr1 (27-202)||(42834526-42834704)
chr1 (32-116)||(43114747-43114833)
chr1 (28-123)||(45296767-45296864)
chr1 (38-117)||(6318917-6318997)
chr1 (32-183)||(45378339-45378493)
chr1 (48-119)||(40793031-40793103)
chr1 (59-114)||(47794817-47794873)
chr1 (40-180)||(11981121-11981265)
chr1 (27-115)||(11981413-11981505)
chr1 (28-92)||(6614289-6614355)
chr1 (132-187)||(47882428-47882483)
chr1 (32-88)||(46675732-46675789)
chr1 (71-123)||(10066476-10066528)
chr1 (32-100)||(26182804-26182871)
chr1 (28-84)||(6941636-6941694)
chr1 (136-187)||(46675667-46675718)
chr1 (31-88)||(9626180-9626238)
chr1 (71-116)||(10105986-10106031)
chr1 (37-77)||(20725834-20725874)
chr1 (35-86)||(21072631-21072683)
chr1 (29-57)||(47794658-47794686)
[»] chr7 (60 HSPs)
chr7 (28-192)||(35526476-35526644)
chr7 (28-195)||(26246552-26246721)
chr7 (27-193)||(38319942-38320108)
chr7 (28-202)||(10283217-10283394)
chr7 (27-167)||(30121871-30122012)
chr7 (28-202)||(26970721-26970895)
chr7 (28-200)||(5800963-5801138)
chr7 (27-187)||(44434615-44434777)
chr7 (28-202)||(24162088-24162268)
chr7 (28-123)||(40261908-40262004)
chr7 (32-119)||(21696475-21696562)
chr7 (27-194)||(47222475-47222634)
chr7 (27-192)||(14312389-14312554)
chr7 (28-115)||(24689338-24689428)
chr7 (28-123)||(26970413-26970509)
chr7 (28-193)||(24688716-24688881)
chr7 (40-195)||(30121282-30121439)
chr7 (39-187)||(24689060-24689207)
chr7 (32-202)||(4399662-4399835)
chr7 (28-178)||(45447518-45447673)
chr7 (27-123)||(23640754-23640851)
chr7 (28-123)||(33857994-33858090)
chr7 (47-193)||(26151097-26151243)
chr7 (28-195)||(21696720-21696885)
chr7 (52-202)||(29854700-29854851)
chr7 (28-193)||(35525904-35526073)
chr7 (28-103)||(46897939-46898015)
chr7 (71-194)||(31278229-31278351)
chr7 (28-123)||(23808931-23809027)
chr7 (27-102)||(30122176-30122252)
chr7 (32-100)||(35527464-35527532)
chr7 (71-123)||(4594469-4594521)
chr7 (71-169)||(11486414-11486512)
chr7 (132-193)||(1644309-1644370)
chr7 (28-100)||(10282501-10282574)
chr7 (32-100)||(10282700-10282769)
chr7 (32-100)||(11750043-11750112)
chr7 (136-193)||(23808853-23808910)
chr7 (28-68)||(11485955-11485995)
chr7 (28-123)||(35223785-35223880)
chr7 (32-100)||(35526221-35526289)
chr7 (72-175)||(15639992-15640094)
chr7 (27-94)||(15641014-15641083)
chr7 (35-100)||(26175462-26175528)
chr7 (28-100)||(1644532-1644605)
chr7 (83-181)||(10281999-10282096)
chr7 (141-181)||(15639873-15639913)
chr7 (32-99)||(37986005-37986073)
chr7 (72-123)||(15640619-15640670)
chr7 (132-187)||(23895675-23895730)
chr7 (36-85)||(18984714-18984764)
chr7 (36-85)||(18989529-18989579)
chr7 (36-85)||(18999343-18999393)
chr7 (32-91)||(45883292-45883353)
chr7 (144-193)||(5372983-5373032)
chr7 (33-70)||(7630117-7630154)
chr7 (132-181)||(26175378-26175427)
chr7 (138-187)||(32988690-32988739)
chr7 (39-100)||(45689543-45689604)
chr7 (33-100)||(581197-581265)
[»] chr6 (22 HSPs)
chr6 (28-123)||(2258698-2258794)
chr6 (28-119)||(33438664-33438755)
chr6 (28-123)||(21980907-21981003)
chr6 (47-157)||(7204761-7204872)
chr6 (28-177)||(26209120-26209272)
chr6 (72-180)||(3306916-3307024)
chr6 (28-123)||(26001246-26001342)
chr6 (27-112)||(10780177-10780263)
chr6 (27-123)||(5679063-5679162)
chr6 (32-114)||(14094064-14094147)
chr6 (39-123)||(7858461-7858551)
chr6 (27-68)||(3307396-3307437)
chr6 (28-68)||(20469376-20469416)
chr6 (134-187)||(24006775-24006828)
chr6 (35-100)||(24006857-24006924)
chr6 (29-67)||(3307116-3307154)
chr6 (133-187)||(4826136-4826190)
chr6 (59-95)||(9740606-9740643)
chr6 (32-64)||(3307070-3307102)
chr6 (32-88)||(8116238-8116294)
chr6 (32-68)||(22533500-22533536)
chr6 (32-68)||(32952451-32952487)
[»] scaffold0024 (1 HSPs)
scaffold0024 (32-202)||(150110-150280)
[»] scaffold0224 (2 HSPs)
scaffold0224 (27-123)||(21987-22082)
scaffold0224 (27-202)||(21607-21785)
[»] scaffold0376 (1 HSPs)
scaffold0376 (29-153)||(1905-2029)
[»] scaffold0267 (1 HSPs)
scaffold0267 (41-193)||(3243-3399)
[»] scaffold0625 (1 HSPs)
scaffold0625 (36-85)||(7182-7232)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-100)||(29103-29171)


Alignment Details
Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 24842569 - 24842398
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||       
T  24842569 aaaacaaataatttagtttgtttggatacaactatataaaagagttttttgttacaaaattagttcaatattttaaatcatattttctccctcctctaaa 24842470  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggtt 198  Q
         |||||||||| ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  24842469 aaaaatctattttttgagaagatgctcttaacaacttctcatttgaagctgtttttaaattatttttaggtt 24842398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 54356269 - 54356444
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  54356269 aaacaaataatttagtttgtttggatataactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaaa 54356368  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         |||||||||| |||||| |||||||| ||| ||||||||| | ||||||| ||||| ||||||| ||||||    
T  54356369 aaaaatctattttttgagaagccgctcttaacaacctctcatttggatctgtttttagattttttttagattctga 54356444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 11633068 - 11633230
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||||||||||           
T  11633068 aaataatctagtttgtttggatacaactatataaaagagattttttattacaaaattagttcaatcttttaaatcatattt--tctctcctctaaaaaaa 11633165  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
     |||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  11633166 atctattttttgagaagctgctcttaacaacttttcatttgaagctgtttttagattttttttag 11633230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 8708018 - 8708179
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nn 125  Q
    ||||||||||| | |||||||| ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  8708018 aaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaaa 8708117  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
          |||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||    
T  8708118 aaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagatt 8708179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 9059905 - 9060066
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nn 125  Q
    ||||||||||| | |||||||| ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  9059905 aaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaaa 9060004  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
          |||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||    
T  9060005 aaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagatt 9060066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 10332771 - 10332612
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||| |||| ||||||||||||||||||        
T  10332771 aaacaaataattcagtttgtttggatacaactatataaaagggatttttgttacaaaattagttcaatgtttaaaataatattttctctctcctctaaaa 10332672  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
        |||| |||||   ||| ||||||||| | ||||||||||||||||||||| |||||    
T  10332671 aaaatctactttttgtaaagttgctcttaacaccttctcatttgaagctgtttttagatt 10332612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 54981887 - 54982061
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||| ||||||| |||||||||  | |||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  54981887 aaacaaataatctagtttgttttgatacaactatataaaacggattttttgttacaaaattagttcaatcttttaaaatatattttctctctcctctaaa 54981986  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         | |||||||| ||||||||||||||| | ||||||||||||||  ||||| ||||| ||||||| ||||||    
T  54981987 aaaaatttattttttgagaagctgctcttaacagcttctcatttgaagtcgtttttagatt-tttttagattctga 54982061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 47567725 - 47567548
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||| || ||||||||||||| | |||||||||| | |||||||||||||| |||||||||||||||||   ||||||||||||||||||      
T  47567725 aaaacaaataatataatttgtttggatactactatataaaagggattttttgttacaaagttagttcaatcttttaagcaatattttctctctcctctaa 47567626  T
Q  126 nnnnnntcta-ttttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |||| |||||| ||||||||||||||| ||||| ||||||||||||||||| ||| | ||||||| ||||||    
T  47567625 aaaaaatctattttttttagaagctgctcttaacaacttttcatttgaagctgtttttagaatttttttagattctga 47567548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 10297295 - 10297135
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatata--aaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||||||||||||||||||||| ||||||  |||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||      
T  10297295 aaacaaataatttagtttgtttggatacaactatatataaaagggatttctgttacaaaattagttcaatcttttaaataatattttctctctcctct-a 10297197  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
          ||||||||||  |||| ||||||||| | |||||||||| | |||||||| |||||    
T  10297196 aaaaaatctattttttgtgaagttgctcttaacaccttctcatttaatgctgtttttagatt 10297135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 21388507 - 21388347
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||||||||||  ||||||||||||||||||       
T  21388507 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttataaaattagttcaatcttttaaacaatattttctctctcctctaaa 21388408  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
         ||| |||||| ||||| ||||||||| | |||||||||| ||| | |||| |||||    
T  21388407 aaaaatcttttttttgagaagttgctcttaacagcttctcatttaaagatatttttagatt 21388347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 10297423 - 10297578
Alignment:
Q  38 tttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctat 136  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||        |||||    
T  10297423 tttagtttgttttgatacaaatatataaaagagattttttgttacaaaattagttcaatttttaaaaccatattttctctcacctct-aaataaatctat 10297521  T
Q  137 tttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    ||||| |||| |||| ||||| | ||||||||||||| ||||||| |||||||||||    
T  10297522 tttttgagaaactgcacttaacagcttctcatttgaaactgtttttagattattttt 10297578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 45586099 - 45586266
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||||||||||||||| ||||||  ||||||||||  |||||||||||||||||||||||||||||| || ||||||||| |||||||||      
T  45586099 aaaacaaataatttagtttgtttgaatacaacaatataaaagatattttttgttacaaaattagttcaatcttttgaaccatattttcactctcctctaa 45586198  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
          |||||||||| ||||| || |||||| |  | | |||||||||||||||| ||||| |||||    
T  45586199 aaaaaatctattttttgagaagttgttcttaacagttccccatttgaagctgtttttagatttttttt 45586266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 23027630 - 23027509
Alignment:
Q  74 tttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||| |  ||||||||| ||    
T  23027630 tttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaaagaaaatctattttttgagaagctgctcttaacagtttctcatttaaa 23027531  T
Q  174 gctgttttaagattatttttag 195  Q
    | |||||| ||||| |||||||    
T  23027530 gttgtttttagattttttttag 23027509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 46515033 - 46515186
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnnnnntc 133  Q
    |||||||||||||  |||||||  ||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||         ||    
T  46515033 aatttagtttgttcagatacaacaatataaaagagattttttgatacaaaattagttcaatattttaaaccatattttctctctcctctaaaaaaatatc 46515132  T
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||||| |||||||| |||||| ||||||||||||||||| ||||| |||||    
T  46515133 tattttttgagaagctgttcttaacaacttctcatttgaagcggtttttagatt 46515186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 7433688 - 7433513
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||| ||| |||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| | ||||      
T  7433688 aaaacaaataatctagcttgtttggatacaactatataaaatgaattttttgttacaaaattagtttaatcttttaaatcatattttctcttttctctaa 7433589  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          | ||||||||  |||||| ||||||| | |||||||||||||| |||||| | ||  ||||||| ||||||    
T  7433588 gaaaaat-tattttttgcgaagcttctcttaacagcttctcatttgaagttgtttttaaatattttttagattctga 7433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 26167973 - 26167886
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    |||||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||    
T  26167973 aaataatttagtttgtttggatacaactatataaaagagatttttttttgttacaaaattagttcaatcttttaaatcatattctctc 26167886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 24485682 - 24485585
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaaga-gttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||||||||| |||| ||||| || ||||||    
T  24485682 aaaacaaataatttagtttgtttggatacaactatataaaataggttttttgttacaaaactagttcaatcttttaattcatgttttccctttcctct 24485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 10333101 - 10333197
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||| |||| |||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10333101 aaacaagtaatctagtttgtttagatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctct 10333197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 42583594 - 42583690
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagag-ttttttgtta-caaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||||    
T  42583594 aacaaataatttagtttgtttgaatacaactatataaaagagattttttgttataaaaattagttcaatcttttaaatcatgttttttctctcctct 42583690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 54585917 - 54585755
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    |||||||||||||||||||||||||  |||||||||  || |||||||||||||||||||||||||| ||  |  ||||||||||||||| |||          
T  54585917 aaataatttagtttgtttggatacagctatataaaagcgatttttttgttacaaaattagttcaatccttatatccatattttctctctcatct-aaaaa 54585819  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
      |||||||||| |||||||||||| || | ||||||||| ||||||||||| ||||| |||||    
T  54585818 aatctattttttgagaagctgctctcaacagcttctcattcgaagctgtttttagatttttttt 54585755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 10317131 - 10316973
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||||| | ||||||||||||    |||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||||        
T  10317131 aaacaaataattcaatttgtttggataactatatataaaagggatttttgttacaaaattagtttaatcttttaaataatattttctctctcctct-gaa 10317033  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
        |||| |||||  |||| ||||||||| | |||||||||| |||||||||| |||||    
T  10317032 aaaatctactttttgtgaagttgctcttaacaccttctcatttaaagctgtttttagatt 10316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 40285126 - 40285036
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 121  Q
    ||||||| |||||| ||||||||||| |||||||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  40285126 aaataatctagtttatttggatacaactatataaaaggaattttttgttacaaaattaattcaatattttaaatcatattttctctctcct 40285036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 34794536 - 34794397
Alignment:
Q  51 gatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaag 147  Q
    ||||||| |||| |||||||   |||||| |||||| || ||||||||||||||||  ||||||||||||||||||        |||||||||| |||||    
T  34794536 gatacaactatacaaaagagatttttttttttacaagatgagttcaatcttttaaaaaatattttctctctcctctaaaaaaaatctattttttgagaag 34794437  T
Q  148 ctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||||||||  |||||||||||||||||||| |||||    
T  34794436 ctgctcttaatattttctcatttgaagctgtttttagatt 34794397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 12101065 - 12101201
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagtt-ttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    ||||||| || |||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||| ||||           
T  12101065 aaataatctaatttgtttggatataactatataaaagagatgttttgttacaaaattagttcaatcttttaaacaatattttctctcttctctaaaaaaa 12101164  T
Q  131 ntctattttttaagaagctgctcttaataacttctca 167  Q
     |||||||||| ||||| ||||||||| | |||||||    
T  12101165 atctatttttttagaagttgctcttaagagcttctca 12101201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 3942665 - 3942503
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaat-cttttaaatcatattttctctctcctct-- 123  Q
    ||||||||||| ||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||| |||| |||  ||||||||||||| || |      
T  3942665 aaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttacaaaattagttcaatcctttaaaaaaatattttctctctactataa 3942566  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagat 186  Q
            |||||||||| ||||||||||||||| | ||| ||||||||||||||||| ||||    
T  3942565 aaaaaaaatctattttttgagaagctgctcttaacagcttttcatttgaagctgtttttagat 3942503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 30498521 - 30498351
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    |||| ||||||||||||| ||||||| |||||||||||| |||| ||||| |||||||||||||| |||| |   ||||||||||||||||||           
T  30498521 aaatgatttagtttgttttgatacaactatataaaagagattttctgttataaaattagttcaatattttgatctatattttctctctcctctaaaataa 30498422  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
     | |||||||| ||||||| ||||||| |||||||||||||||| |  ||| ||||| ||||||| ||||||    
T  30498421 tt-tattttttgagaagctactcttaacaacttctcatttgaagttacttttagattttttttagattctga 30498351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 54142993 - 54143152
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||| ||| ||||| |||||||||| | |||||||||  | ||||||||||||||||||||||||| |||||||  ||||||||||||||||||       
T  54142993 aaacaaaaaatctagttagtttggatacgactatataaaatggattttttgttacaaaattagttcaattttttaaacaatattttctctctcctctaaa 54143092  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagat 186  Q
         | |||||||| ||| ||||| ||||| | |||||||||||||| |||||| ||||    
T  54143093 caaaatatattttttgagaggctgcgcttaacagcttctcatttgaagttgtttttagat 54143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 53877641 - 53877735
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttt-tttgttacaaaattagttcaatcttttaaatcatattttctctctcct 121  Q
    |||||||||||||||||| ||| |||| || |||||||||| | || |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  53877641 aaacaaataatttagtttatttagatataactatataaaagggattatttgttgcaaaatcagttcaatcttttaaatcatattttctctctcct 53877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 54981693 - 54981599
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 121  Q
    |||||||||||||||||||||| |||||||||||||||||  | |||||  || |||||||||||||||||||||||| ||||||||||| ||||    
T  54981693 aaacaaataatttagtttgttttgatacaattatataaaaatgatttttcattgcaaaattagttcaatcttttaaattatattttctctgtcct 54981599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 21459614 - 21459703
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctct 116  Q
    |||||||||||||||||||| | | ||||| |||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  21459614 aaacaaataatttagtttgtgtaggtacaactatataaaaggaattttttgttacaaaattagtttaatcttttaaaacatattttctct 21459703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 44077890 - 44077791
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa---gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||| ||||||| |||||||||||||||||| |||||||||      |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  44077890 aaaataaataatctagtttgtttggatacaactatataaaatgtattttttttgttacaaaattagttcaatcttttaaattatattttctctcttctct 44077791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 26760565 - 26760661
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||| |||||| |||||||||| | | |||||||| ||||||| |||| ||||||||| |||||||| ||||||||||    
T  26760565 aaacaaataatttagtttgtttgaatacaactatataaaagaaatattttgttaaaaaattaattcattcttttaaaccatattttttctctcctct 26760661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 7335646 - 7335757
Alignment:
Q  82 aaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||| |   ||| || |||||||| |||||||||||||||||||||    
T  7335646 aaaattagttcaatcttttaaatcatattttctctctcctct-gaaaaaatctattttattttaagttgatcttaatagcttctcatttgaagctgtttt 7335744  T
Q  182 aagattattttta 194  Q
     ||||||||||||    
T  7335745 tagattattttta 7335757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 10334292 - 10334361
Alignment:
Q  133 ctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||    
T  10334292 ctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagattatttttagattctga 10334361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 10317246 - 10317396
Alignment:
Q  43 tttgtttggatacaattatataaaagagtttttt-gttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctatttttt 141  Q
    ||||||| ||||||| |||| ||||||| ||||| ||||||||||||||||||| ||| ||| ||||||||||||| |||||        |||||||||     
T  10317246 tttgttttgatacaaatataaaaaagagatttttcgttacaaaattagttcaatttttaaaaccatattttctctcacctct-aaataaatctatttttc 10317344  T
Q  142 aagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
     ||||||||| ||||| | ||||||||||||| || |||| ||||| |||||    
T  10317345 tagaagctgcacttaacagcttctcatttgaaactatttttagatttttttt 10317396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 33832809 - 33832873
Alignment:
Q  39 ttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaa 102  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||    
T  33832809 ttagtttgtttggatacaactatataaaagagattttttgtcacaaaattaattcaatcttttaa 33832873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 13207887 - 13207980
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaa-agagttt-tttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||| || |||||||| ||| ||  |||||||||||||||||||| |||||| || ||||| || ||||||||||    
T  13207887 aaataatttagtttgtttggataaaactatataaatagatttggtttgttacaaaattagttcattcttttgaaccatatattttctctcctct 13207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 3781485 - 3781404
Alignment:
Q  41 agtttgtttggatacaattatataaaagag-ttttttgttacaaaat---tagttcaatcttttaaatcatattttctctct 118  Q
    |||||||||||| |||| |||||||||| | ||||||||||||||||   |||||||||||||| | |||||||||||||||    
T  3781485 agtttgtttggaaacaactatataaaagtgattttttgttacaaaataattagttcaatcttttgactcatattttctctct 3781404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 3821489 - 3821408
Alignment:
Q  41 agtttgtttggatacaattatataaaagagt-tttttgttacaaaat---tagttcaatcttttaaatcatattttctctct 118  Q
    ||||||||||||||||| |||||||||| |  |||||||||||||||   |||||||||||||| | |||||||||||||||    
T  3821489 agtttgtttggatacaactatataaaagtgaatttttgttacaaaataattagttcaatcttttgactcatattttctctct 3821408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 3789734 - 3789791
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaatta 88  Q
    |||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  3789734 aaattatttagtttgtttggatacaattatataaaagttattttttgttacaaaatta 3789791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 47567846 - 47567774
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctt 98  Q
    |||||||||||| || ||||||||||||| | |||||||||| | |||||||||||||| |||||| ||||||    
T  47567846 aaaacaaataatctaatttgtttggatactactatataaaagggattttttgttacaaagttagtttaatctt 47567774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 10334483 - 10334537
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagat 186  Q
    |||||||||| ||||| ||||||||| |||||||||||||||| |||||| ||||    
T  10334483 tctattttttgagaagttgctcttaacaacttctcatttgaagttgtttttagat 10334537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 55158165 - 55158089
Alignment:
Q  40 tagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    |||||| |||||||||||  |||||||| || || ||||||| ||||||||||||||||||| | || |||||||||    
T  55158165 tagtttatttggatacaacaatataaaatgaattatttgttataaaattagttcaatcttttgattcttattttctc 55158089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 1476822 - 1476732
Alignment:
Q  34 ataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||| ||||||||||| | | ||| |||||||| ||||||||||||||||||  | |||||||| |    |||||||||||||||||    
T  1476822 ataatttaatttgtttggatgctaatatgtaaaagagattttttgttacaaaattatctaaatcttttgacatttattttctctctcctct 1476732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 2788523 - 2788442
Alignment:
Q  43 tttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||| ||| |||||| | ||||||||| ||||||||  || |||||||||  | ||||||||||| |||||    
T  2788523 tttgtttggatacaactatgtaaaagtgattttttgtttcaaaattatctccatcttttaatacttattttctctcccctct 2788442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 3827333 - 3827285
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||||||||||||||||  |||||||||| || | |||||||||||||    
T  3827333 ttttttgttacaaaattacctcaatcttttgaaacttattttctctctc 3827285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 17666119 - 17666174
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaa 85  Q
    |||||||||| ||||||||||||||| ||||||||| ||  ||||| |||||||||    
T  17666119 aaataatttaatttgtttggatacaactatataaaaaaggatttttggttacaaaa 17666174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 43185313 - 43185345
Alignment:
Q  32 aaataatttagtttgtttggatacaattatata 64  Q
    ||||||||||||||||||||||| |||||||||    
T  43185313 aaataatttagtttgtttggatataattatata 43185345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 35308231 - 35308054
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    |||||||||||||||||||||||||||||| |||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35308231 aaacaaataatttagtttgtttggatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctcta 35308132  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
           |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  35308131 aaaaaaatctattttttgagaagctgctcttaacaacttctcatttgaagctgtttttagattttttttagattctga 35308054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 6007671 - 6007837
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| ||||||||||| |||||| |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||       
T  6007671 aaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttgcaaaattagttcaatcttttaaatcatattttctctctcctctaaa 6007770  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
          ||||||||| |||||||||| ||||  |||||||||||||||||||||| ||||||||||||    
T  6007771 aaaaaactattttttgagaagctgcttttaa-cacttctcatttgaagctgtttttagattattttta 6007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 40737426 - 40737578
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||  |||||||||||||| |||        
T  40737426 aacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaatctcttaaaaaatattttctctctcttctaaca 40737525  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttt 180  Q
        |||||||||| ||||| || |||||||| ||||||||||||||||||||    
T  40737526 aaaatctattttttgagaagatgatcttaatagcttctcatttgaagctgttt 40737578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 1030379 - 1030542
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-- 123  Q
    |||| |||| |||| |||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| || |||||||||||||||||      
T  1030379 aaaaaaaattatttggtttgtttggatacaactatataaaagtgattttttgttacaaaattagttcaatcttttaactcttattttctctctcctctaa 1030478  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
            |||||||||| ||||||||||||||| | ||||||||||||| ||||||| |||||    
T  1030479 aaaaaaaatctattttttgagaagctgctcttaacagcttctcatttgaaactgtttttagatt 1030542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 1153744 - 1153622
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| || |||||||||||| | ||||||||||    
T  1153744 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-aaaaaaatctattttttgagtagctgctcttaacagcttctcattt 1153646  T
Q  171 gaagctgttttaagattattttta 194  Q
     |||||||||| ||||||||||||    
T  1153645 taagctgtttttagattattttta 1153622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 5424770 - 5424867
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  5424770 aaacaaataatttagtttgtttggatacaactatataaaagggatttttttgttacaaaattagttcaatcttttaaagcatattttcactctcctct 5424867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 15199729 - 15199882
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||       
T  15199729 aaacaaataatttagtttgtttgaatacaactatataaaaggagttttttattacaaaattagttcaatcttttaaataatattttctctctcgtctaaa 15199828  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
         |||||||| | |||| ||||||||||   |||||||||||||| ||||||    
T  15199829 aaaaatctattttgtgagaaactgctcttaa-cgcttctcatttgaagttgtttt 15199882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 27963954 - 27964050
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  27963954 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaaccttttaaattatattttctctctcctct 27964050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 27881312 - 27881479
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||||| |||       
T  27881312 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaaccttttaaattatattttctctctcttctaaa 27881411  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
         |||||||| |   ||| ||||| ||| | |||||||||||||| |||||| | ||||||||||    
T  27881412 aaaaatctattttattttaagatgctcctaacagcttctcatttgaagttgttttcaaattattttta 27881479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 28021493 - 28021660
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||||| |||       
T  28021493 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaaccttttaaattatattttctctctcttctaaa 28021592  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
         |||||||| |   ||| ||||| ||| | |||||||||||||| |||||| | ||||||||||    
T  28021593 aaaaatctattttattttaagatgctcctaacagcttctcatttgaagttgttttcaaattattttta 28021660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 13916532 - 13916622
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctc 117  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  13916532 aaacaaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaaacatattttttctc 13916622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 28828125 - 28827969
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagtttttt---gttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    |||||||||||||| ||||||||||||||| |||||||||| | |||||   |||||||| |||||||||||||||||||||||||||| ||||||| |     
T  28828125 aaacaaataatttaatttgtttggatacaactatataaaagggatttttttcgttacaaagttagttcaatcttttaaatcatattttcactctcctata 28828026  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
           |||||||||| ||||||||||| ||| | ||| ||| |||||||||||||    
T  28828025 aaaaaaatctattttttgagaagctgctcataacagcttttcaattgaagctgtttt 28827969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 17073073 - 17072895
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-- 123  Q
    ||||| ||||| || ||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||      
T  17073073 aaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattttctctgtcctctgc 17072974  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
            | ||| |||| ||||  |||||| || ||||| ||||||||||||||||| ||||| ||||||| ||||||    
T  17072973 aaaaataatatatgttttgagaaaatgctctcaacaacttttcatttgaagctgtttttagattttttttagattctga 17072895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 27917535 - 27917627
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27917535 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaaccttttaaattatattttctctctc 27917627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 17575197 - 17575376
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||| ||||| || ||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||      
T  17575197 aaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattttctctgtcctctgc 17575296  T
Q  126 nnnnnntc---tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |    ||| |||| ||||  |||||| || ||||| ||||||||||||||||| ||||| ||||||| ||||||    
T  17575297 aaaaaataatatatgttttgagaaaatgctctcaacaacttttcatttgaagctgtttttagattttttttagattctga 17575376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 28022358 - 28022444
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatatttt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||||| |||||||||    
T  28022358 aaaacaaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaattcaatcttttaattcatatttt 28022444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 28022719 - 28022547
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttt--tgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    ||||||||||||||||||||| |||  |||||||||| | ||||  ||||||||||||||||||||||||  |  || ||||||||||||||||          
T  28022719 aaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacattttctctctcctctaaaaaa 28022620  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
      |||||||||| ||||||| |||| || | ||||||||||||||||||||| ||||| || |||| ||||||    
T  28022619 aatctattttttgagaagctactctcaacagcttctcatttgaagctgtttttagatttttgttagattctga 28022547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 5424580 - 5424485
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagt-tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  5424580 aaacaaataatt-agtttgtttggatacaactatataaaagagactttttgttacaaaatttgttcaatcttttaaaccatattttctctatcctct 5424485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 27964813 - 27964899
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatatttt 112  Q
    ||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  27964813 aaaacaaataattgagtttgtttggatacaactatataaaagggattttttgttacaaaactagttcaatcttttaattcatatttt 27964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 342769 - 342700
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  342769 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatctttt 342700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 27882183 - 27882264
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatatttt 112  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||||| |||||||||    
T  27882183 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaattcaatcttttaattcatatttt 27882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 27882539 - 27882367
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttt--tgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    ||||||||||||||||||||| |||  |||||||||| | ||||  ||||||||||||||||||||||||  |  || ||||||||||||||||          
T  27882539 aaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacattttctctctcctctaaaaaa 27882440  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
      |||||||||| ||||||| |||| || | ||||||||||||||||||||| | ||| || |||| ||||||    
T  27882439 aatctattttttgagaagctactctcaacagcttctcatttgaagctgtttttacatttttgttagattctga 27882367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 40796275 - 40796176
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa---gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||| |||||||||||||||||  |||||||||    | |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  40796275 aaaacaaataatctagtttgtttggatacagctatataaaaatgaattttttttttacaaaattagttcaatcttttaaaccatattttctctctcctct 40796176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 17073286 - 17073437
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||| ||| ||||||||||||||| ||   | ||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  17073286 aaacaaacaatctagtttgtttggatataaccgtgtaaaatgaattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctaaa 17073385  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgt 178  Q
         | |||||||| |||  |||||||||| | ||||||||||||||||||    
T  17073386 caaaatttattttttgagatactgctcttaacagcttctcatttgaagctgt 17073437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 17574984 - 17574833
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||| ||| ||||||||||||||| ||   | ||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  17574984 aaacaaacaatctagtttgtttggatataaccgtgtaaaatgaattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctaaa 17574885  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgt 178  Q
         | |||||||| |||  |||||||||| | ||||||||||||||||||    
T  17574884 caaaatttattttttgagatactgctcttaacagcttctcatttgaagctgt 17574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 27965175 - 27965012
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnnn 129  Q
    |||||||||||||||||||| |||  |||||||||  || ||| |||||||||||||||||||||| ||  |  |||||||||| ||||||||           
T  27965175 aataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatcgttagatccatattttctatctcctctaaaaaaa 27965076  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
      |||||||||| ||||||| |||| || | ||||||||||||||||||||| ||||| |||||    
T  27965075 aatctattttttgagaagctactctcaacagcttctcatttgaagctgtttttagatttttttt 27965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 5765464 - 5765365
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||| |||| || |||||||||  |    ||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  5765464 aaacaaataatctagtttgtttagataaaactatataaaatggatttttttttgttgcaaaattagttcaatcttttaaaaaatattttctctctcctct 5765365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 5764880 - 5764976
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |  ||||||||||||||| |||||||||| | |||||||||||||| ||| |||||| ||||||   ||||||||||||||||||    
T  5764880 aaacaaataatctgatttgtttggatacaactatataaaagggattttttgttacaaagttacttcaatattttaagcaatattttctctctcctct 5764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 32693641 - 32693545
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||| |||| || |||||||| | | |||||||| | ||||||||||||||| |||  | |||||||||||||||||||    
T  32693641 aaacaaataatttagtttgttttgatataactatataaacggaattttttgtaagaaaattagttcaatcatttgtaccatattttctctctcctct 32693545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 32795386 - 32795542
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgtta-caaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    ||||||||||||||||||| |||||| |||||||||  | ||||| | | |||||||| |||||| |||| ||||||||||||||||||||             
T  32795386 aaataatttagtttgtttgaatacaactatataaaatggatttttctcaacaaaattatttcaatattttgaatcatattttctctctcctaaaaaaaaa 32795485  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
     |||||||||| | |||||  | |||| | ||||||||||||||||||||| |||||    
T  32795486 atctattttttgataagctatttttaacagcttctcatttgaagctgtttttagatt 32795542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 32855139 - 32855202
Alignment:
Q  39 ttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatctttt 100  Q
    |||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32855139 ttagattgtttggttacaattatataaaagagatttttttgttacaaaattagttcaatctttt 32855202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 45182959 - 45183043
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctct 118  Q
    ||||||||||||||||||||||||||  ||| |||| | |||||| ||||||||||||||||||||||| |  ||||||||||||||    
T  45182959 aaataatttagtttgtttggatacaac-ata-aaaacaattttttattacaaaattagttcaatcttttgatccatattttctctct 45183043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 6008028 - 6008097
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatc 96  Q
    |||||||| || ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||    
T  6008028 aaacaaattatctagtttgtttgcatacaattatataaaagggattttttgttacaaaattatttcaatc 6008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 35102881 - 35102961
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||||||||||||||||||||||| |||||||||      || |||||||||||||||||| ||||| || | |||||||||||||    
T  35102881 aataatttagtttgtttggatacaactatataaaa------ttggttacaaaattagttcaaccttttgaaacctattttctctctc 35102961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 28152464 - 28152538
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttt-tttgttacaaaattagttcaatctttt 100  Q
    |||| ||||||| |||| | ||||||||||| ||||||||| || || |||||||||||||||||||||||||||    
T  28152464 aaaataaataatctagtgtatttggatacaactatataaaatagattatttgttacaaaattagttcaatctttt 28152538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 24981511 - 24981579
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttt 99  Q
    ||||||||||||||||||| |||| | ||| |||||| | |||||||||||||||||| ||||||||||    
T  24981511 aaataatttagtttgtttgaatacgactatgtaaaagggattttttgttacaaaattaattcaatcttt 24981579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 339872 - 339952
Alignment:
Q  46 gtttggatacaattatataaaag---agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||| ||||||||||     ||||||||| |||||| ||||||||||||| |  |||||||||||||||||||    
T  339872 gtttggatacaactatataaaaggaattttttttgtttcaaaatcagttcaatcttttgacccatattttctctctcctct 339952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 8377048 - 8377093
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctct 116  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||    
T  8377048 ttttttgttataaaattagttcaatcttttgaaccatattttctct 8377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 13638079 - 13638128
Alignment:
Q  37 atttagtttgtttggatacaattatataaaagagttttttgttacaaaat 86  Q
    ||||||||||||| ||||||| ||||||||| | ||||||||||||||||    
T  13638079 atttagtttgtttagatacaactatataaaataattttttgttacaaaat 13638128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 13738492 - 13738541
Alignment:
Q  37 atttagtttgtttggatacaattatataaaagagttttttgttacaaaat 86  Q
    ||||||||||||| ||||||| ||||||||| | ||||||||||||||||    
T  13738492 atttagtttgtttagatacaactatataaaataattttttgttacaaaat 13738541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 4443963 - 4444003
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  4443963 aaacaaataatttagtttgtttggatacaacaatataaaag 4444003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 8376194 - 8376232
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaa 67  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  8376194 aacaaataatttagtttgtttggatacacctatataaaa 8376232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 1580322 - 1580351
Alignment:
Q  71 ttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||||||||||||||||||||    
T  1580322 ttttttgttacaaaattagttcaatctttt 1580351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 11850590 - 11850533
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattag 89  Q
    |||| |||||||||||||  |||||||||||||||| |  ||||| ||||||||||||    
T  11850590 aaattatttagtttgtttatatacaattatataaaataaatttttattacaaaattag 11850533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 29475215 - 29475268
Alignment:
Q  39 ttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagtt 91  Q
    ||||||||||||||||||| ||||||||| || | |||| ||||||||||||||    
T  29475215 ttagtttgtttggatacaactatataaaatgaatatttttttacaaaattagtt 29475268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 3256102 - 3256272
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    ||||||||||||||||||||||| |||||| ||||||||||||   |||||||||| |||||| ||||||||||||||||||||||||||||||||| |     
T  3256102 aaacaaataatttagtttgtttgtatacaactatataaaagagattttttttgttaaaaaattggttcaatcttttaaatcatattttctctctcctata 3256201  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
           |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  3256202 aaaaaaatctattttttaagaagctgctcttaacagcttctcatttgaagctgtttttagattatttttag 3256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 42676465 - 42676641
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nn 125  Q
    ||||||| ||| ||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||       
T  42676465 aaacaaaaaatctagtttgtttgcatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttctctatcctctaaa 42676564  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |||||||||| ||||||||||||| | | ||||||||||||||||||||| ||||||||||||| ||||||    
T  42676565 aaaaaatctattttttgagaagctgctcttgacagcttctcatttgaagctgtttttagattatttttagattctga 42676641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 30668856 - 30669010
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    |||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||        | |||||    
T  30668856 tagtttgtttggatacaattatataaacatgattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaaaaaaaatatattt 30668955  T
Q  139 tttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    ||| ||||| ||||||||||| |||||||||||||||| |||| ||||| |||||    
T  30668956 tttgagaagttgctcttaatagcttctcatttgaagctttttttagatttttttt 30669010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 21479406 - 21479580
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||||||||| |||||||||||||||||| |||||||||  || ||||| ||||||||||||||||||| |||||||  |||| |||||||||||||      
T  21479406 aaacaaataatctagtttgtttggatacaactatataaaagggattttttcgttacaaaattagttcaattttttaaa--atatattctctctcctctaa 21479503  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |||||||||| |||||||| |||||| | ||||||||||||||||||||| ||||| ||||||| ||||||    
T  21479504 aaaaaatctattttttgagaagctggtcttaacagcttctcatttgaagctgtttttagattttttttagattctga 21479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 40662839 - 40662677
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||           
T  40662839 aaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaattttttaaatcatattttctctctcctctaaaaaaa 40662740  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
     | |||||||| ||||| ||||  ||| | |||||||||||| | |||||| ||||||||||||    
T  40662739 tt-tattttttgagaagttgctaataacagcttctcatttgatgatgtttttagattattttta 40662677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 14787201 - 14787355
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| || ||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||       
T  14787201 aaacaaataatctaatttgtttggatacaactatctaaaagagattttttgttacaaaattaattcaatcttttaaacaatattttctctctcctctaaa 14787300  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
         |||||||||| ||||| ||||||||| | |||||||||| ||||||||||    
T  14787301 aaaaatctattttttgagaagttgctcttaacagcttctcatttaaagctgtttt 14787355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 43968652 - 43968494
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||| || |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||  ||||||||       
T  43968652 aaacaaataatctagtgtgcttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttc--tctcctctaaa 43968555  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
         |||||||||| | ||| ||||||||| ||||| ||||||||||||||||| |||||    
T  43968554 aaaaatctattttttgataaggtgctcttaacaacttttcatttgaagctgtttttagatt 43968494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 30666273 - 30666436
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    ||||||||||| |||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||        | |||||    
T  30666273 tagtttgtttgaatacaaatatataaaagggattttttgttacaaaatttgttcaatcttttaaatcatattttctctctcatctaaaaaaaatatattt 30666372  T
Q  139 tttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||| |||||||||| |||| | ||||||||||||||| ||||| ||||  ||||||| ||||||    
T  30666373 tttgagaagctgcttttaacagcttctcatttgaagcagtttttagatattttttagattctga 30666436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 30620565 - 30620727
Alignment:
Q  40 tagtttgtttggatacaattatataaaagagttttttg-ttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    |||||||||| ||||||| |||||||||  | |||||| |||||||||||||||||||||||| |||||||||||||||||||||        | |||||    
T  30620565 tagtttgtttcgatacaactatataaaaatgatttttggttacaaaattagttcaatcttttatatcatattttctctctcctct-aaaaaaatatattt 30620663  T
Q  139 tttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||| ||||| ||||||||| |||||||||||||||||||| || | ||| ||||||| ||||||    
T  30620664 tttgagaagttgctcttaacaacttctcatttgaagctgtgtttatattttttttagattctga 30620727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 30623186 - 30623348
Alignment:
Q  40 tagtttgtttggatacaattatataaaagagttttttg-ttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    |||||||||| ||||||| |||||||||  | |||||| |||||||||||||||||||||||| |||||||||||||||||||||        | |||||    
T  30623186 tagtttgtttcgatacaactatataaaaatgatttttggttacaaaattagttcaatcttttatatcatattttctctctcctct-aaaaaaatatattt 30623284  T
Q  139 tttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||| ||||| ||||||||| |||||||||||||||||||| || | ||| ||||||| ||||||    
T  30623285 tttgagaagttgctcttaacaacttctcatttgaagctgtgtttatattttttttagattctga 30623348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 15458946 - 15459114
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||||||||  || ||| |||||||||||| ||||||       
T  15458946 aaacaaataatttggtttgtttggatacaactatataaaagtgattttttgttacaaaattagttcaatacttaaaaccatattttctctttcctctaaa 15459045  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
         | |||||||| ||||| ||||||||| | ||||||||| ||||| | ||| ||||| |||||||    
T  15459046 aaaaatgtattttttgagaagttgctcttaacagcttctcattcgaagcggattttagattttttttag 15459114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 7074984 - 7074819
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||| |||||||||||||| |||||||| |||||||||  | ||||||| ||||||||||||| ||| |||||||||||||||||| ||| ||||       
T  7074984 aaacaattaatttagtttgttaggatacaactatataaaaatgattttttgatacaaaattagttaaattttttaaatcatattttctgtcttctct-aa 7074886  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
         ||||||| || |||||||||||| || | ||||||||||||||||||||| ||||| |||||    
T  7074885 gaaaatctatttattgagaagctgctctcaagagcttctcatttgaagctgtttttagatttttttt 7074819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 30632215 - 30632292
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctct 116  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  30632215 tagtttgtttggatacaactatataaaagagattttttgttacaaaattaattcaatcttttaaatcatattttctct 30632292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 43004896 - 43004994
Alignment:
Q  30 acaaataatttagtttgtttggatacaattata--taaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||| ||||  || |||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43004896 acaaataatttagtttgtttggatacaactataactataagaggcattttttgttacaaaattagttcaatcttttaaatcatattttctctttcctct 43004994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 39844302 - 39844128
Alignment:
Q  31 caaataatttagtttgtttggatacaattatataaaagagttttt-tgttacaaaattagttcaatcttttaaatcatattttctctctcctct--nnnn 127  Q
    |||||||| |||||||||||||||||| |||||||||| | |||| |||||||||||||||||||||| |||||  ||||||||||||||||||          
T  39844302 caaataatctagtttgtttggatacaactatataaaagggattttctgttacaaaattagttcaatctattaaacaatattttctctctcctctaaaaaa 39844203  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         ||||||||| ||||||||||||||  | |||| ||||||||| |||||| ||||| ||| ||| ||||||    
T  39844202 aaaaactattttttgagaagctgctcttaccagcttcacatttgaagttgtttttagattttttctagattctga 39844128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 43968297 - 43968210
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctct 118  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||    
T  43968297 aaataatttagtttgtttggatacaacgatataaaagagattttttgttacaaaattagttcaatcttttaacccttattttctctct 43968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 7495584 - 7495679
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  7495584 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatttgttcaatcttttaaacaata-tttctctctcctct 7495679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 42679512 - 42679340
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctc-tnnn 126  Q
    ||||||||||| |||||||||||||||||| ||||||||| |     ||||||||||||||||||||| || | ||  ||||||||||||||||| |       
T  42679512 aaacaaataatctagtttgtttggatacaactatataaaaaa---aattgttacaaaattagttcaatattgtgaacaatattttctctctcctcttaaa 42679416  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         |||||||||| ||||| ||||||||| | ||| |||||||||| |||||| ||||| ||||||| ||||||    
T  42679415 aaaaatctattttttgagaagatgctcttaacagcttttcatttgaagttgtttttagattttttttagattctga 42679340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 1826762 - 1826852
Alignment:
Q  34 ataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||| ||||||||||| ||  |||||||||| | |||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  1826762 ataatttaatttgtttggatccagctatataaaagcgattttttattacaaaattagttcaatctttaaattcatattttctctctcctct 1826852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 20612700 - 20612847
Alignment:
Q  34 ataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnnt 132  Q
    ||||| |||||| ||| ||||||| |||||||||| | ||||||||| ||||||||||| ||||||||||| |||||||| |||||||| |        |    
T  20612700 ataatctagtttatttagatacaactatataaaagggattttttgtttcaaaattagtttaatcttttaaaccatattttttctctcct-ttaaaaaaat 20612798  T
Q  133 ctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    ||||||||| ||||||||||||||| |  ||||||||| ||| ||||||    
T  20612799 ctattttttgagaagctgctcttaacagattctcatttaaagttgtttt 20612847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 9420261 - 9420350
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||| |||| ||||||||||||||| |||||||||  || ||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  9420261 aaatattttaatttgtttggatacaactatataaaatggatttttttgttacaaaattagtttaatattttaaaccatatttcctctctc 9420350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 3196995 - 3197064
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||| ||||||  |||||||||| | ||||||||||||||||||||||||||||||    
T  3196995 aaataatttagtttgttttgatacagctatataaaagtgattttttgttacaaaattagttcaatctttt 3197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 18296981 - 18296828
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||| ||| ||| |||||||||||||||||  |||||||  || |||||||||||||||| |||||||||||||   ||||||||| || |||||||       
T  18296981 aaaaaaaacaatctagtttgtttggatacagctatataagcgatttttttgttacaaaatcagttcaatcttttggttcatattttttcgctcctct-aa 18296883  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
         |||||||||||| |||||| |||||  | |||||||||||||| ||||||    
T  18296882 aaaaatctattttttaaaaagctgttcttagcagcttctcatttgaagttgtttt 18296828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 34454177 - 34454340
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    |||||||||||||||||  |||||||||| | |||||| ||||||||||| || ||| |||| | |||||||||||||||| |||        |||||||    
T  34454177 tagtttgtttggatacatctatataaaagcgattttttcttacaaaattaatttaatattttgattcatattttctctctcatctaaaaaaaatctattt 34454276  T
Q  139 tttaagaagctgctcttaataacttctca-tttgaagctgttttaagattatttttaggttctga 202  Q
    ||| | ||||| ||||||  | ||||||| |||||||||||||| ||||| ||||||| ||||||    
T  34454277 tttgataagcttctcttatcagcttctcattttgaagctgtttttagatt-tttttagattctga 34454340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 45654955 - 45655027
Alignment:
Q  52 atacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||| |||| |||  |||||||||||||||||    
T  45654955 atacaactatataaatgagattttttgttacaaaattagttcaattttttgaattgtattttctctctcctct 45655027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 38722851 - 38722914
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaa 94  Q
    ||||||||||||||||||| |||||| ||||||||| || |||||| |||||||||||||||||    
T  38722851 aaataatttagtttgtttgaatacaactatataaaatagattttttattacaaaattagttcaa 38722914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 21479209 - 21479275
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttca 93  Q
    ||||||||||| |||||||||||||||||| || |||||| |  |||||||||||||||||||||||    
T  21479209 aaacaaataatctagtttgtttggatacaactacataaaaggcattttttgttacaaaattagttca 21479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 36950421 - 36950336
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatatttt 112  Q
    ||||||| ||| |||||||||||||| ||| |||||||||  | ||||||||||||||||||||| ||| |||||||  |||||||    
T  36950421 aaacaaacaatctagtttgtttggattcaactatataaaatggattttttgttacaaaattagtttaattttttaaacaatatttt 36950336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 41148992 - 41149049
Alignment:
Q  145 aagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||| || ||||||    
T  41148992 aagctgctcataacaacttctcatttgaagctgtttttagattattttcagattctga 41149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 932692 - 932624
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||  |||||| ||||||||| | |||||||||||||||| ||||||||| ||||    
T  932692 aataatttagtttgttttaatacaactatataaaaagtgttttttgttacaaaactagttcaatttttt 932624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 30632304 - 30632352
Alignment:
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgtttta 182  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  30632304 tattttttgagaagttgctcttaacaacttctcatttgaagctgtttta 30632352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 34453874 - 34453815
Alignment:
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    |||||||| ||||||||||||||| |||||||||||| || ||||||| ||||| |||||    
T  34453874 tattttttgagaagctgctcttaacaacttctcatttaaaactgtttttagatttttttt 34453815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 41347363 - 41347253
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnnnnntctattttttaagaagctgctcttaataacttctcatt 169  Q
    |||||| ||||||||||| |||||||||||||| | ||||||||||| |||||         |||||||||| ||||||||||||||| | ||| |||||    
T  41347363 tttttttttacaaaattacttcaatcttttaaaccctattttctctcacctctaaaaaaaaatctattttttgagaagctgctcttaacagctt-tcatt 41347265  T
Q  170 tgaagctgtttt 181  Q
    ||||| ||||||    
T  41347264 tgaagttgtttt 41347253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 12619104 - 12619161
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaatta 88  Q
    |||||||||| ||| |||| |||||||||||||||| || ||||||||||||||||||    
T  12619104 aaataatttaatttttttgaatacaattatataaaatgaattttttgttacaaaatta 12619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 31667564 - 31667608
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||    
T  31667564 tttttttttacagaattagttcaatcttttaaaccatattttctc 31667608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 38722943 - 38722995
Alignment:
Q  135 attttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||| |||||| |||||||| | ||||||||||||| ||||||| |||||    
T  38722943 attttttgagaagcagctcttaacagcttctcatttgaaactgtttttagatt 38722995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 45655202 - 45655127
Alignment:
Q  35 taatttagtttgtttggatacaattatataaa-agagttttttgttacaaaattagttcaatcttttaaatcatatt 110  Q
    |||||||||||||||| |||||| ||||||||   | |||||||||| |||||||||||| | ||||||| ||||||    
T  45655202 taatttagtttgtttgcatacaactatataaatttaattttttgttataaaattagttcagt-ttttaaaccatatt 45655127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 195
Target Start/End: Original strand, 1349654 - 1349826
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-- 123  Q
    |||||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  1349654 aaaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctaa 1349753  T
Q  124 -nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
             |||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  1349754 aaaaaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagattatttttag 1349826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 19134763 - 19134925
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||||           
T  19134763 aaataatctagtttgtttggatacaattatataaaagggattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctacaaaaa 19134862  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
     |||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  19134863 atctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagatttttttt 19134925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 35040500 - 35040403
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35040500 aaacaaataatttagtttgtttggatacaactatataaaagggaattttttgttacaaaattagttcaatcttttaaatcatattttctccctcctct 35040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 19135030 - 19135177
Alignment:
Q  43 tttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctatttt 139  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||    
T  19135030 tttgtttggatacaactatataaaagagattttttttgttacaaaattagttcaatcttttaaaccatattttctctctcctctataaaaaatctatttt 19135129  T
Q  140 ttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    || |||||||| |||||| | |||||||||| ||||| |||| |||||    
T  19135130 ttgagaagctgttcttaacagcttctcatttaaagctatttttagatt 19135177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 28794001 - 28794155
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||||||||||||||||||| |||||||| | | ||||| |||||||||||| |||||||||||||| | |||||| |||||||| |       
T  28794001 aaacaaataatttagtttgtttggatacaactatataaacgggatttttcgttacaaaattatttcaatcttttaaaccgtattttttctctcctttaaa 28794100  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
         |||||||||| |||||||| || ||||| |||||||||||||||||||||    
T  28794101 aaaaatctattttttgagaagctggtcataatagcttctcatttgaagctgtttt 28794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 5246513 - 5246677
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||| |||       
T  5246513 aaacaaataatttagtttgtttggatacaactatataaaagagatttttttttacaaaattagttcaatcttttaaaccttattttctctctcatctaaa 5246612  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttt 192  Q
         | | |||||| ||||||| || |||| ||||| |||| |||||||||||| ||||| ||||    
T  5246613 aatttt-ttttttttgagaagctccttttaacaacttttcatatgaagctgtttttagattttttt 5246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 25458608 - 25458459
Alignment:
Q  39 ttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctatt 137  Q
    |||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||| |  |||||||||||||||||||        ||||||    
T  25458608 ttagtttgattgaatacaattatataaaagcgattttttgttacaaaattagttcaatcttttgatccatattttctctctcctctaaaaaatatctatt 25458509  T
Q  138 ttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||| ||||||| |  |||| |||||||||||||||| | |||| |||||    
T  25458508 tttttagaagctaccattaacaacttctcatttgaagttatttttagatt 25458459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 4727950 - 4727783
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagtttt--ttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||||||||| ||||||||||| |||||| |||||||||| | |||  ||||||||||||||||||| |||||||||| ||||||||||||||||||      
T  4727950 aaacaaataatctagtttgtttgaatacaactatataaaagggatttgtttgttacaaaattagttcattcttttaaattatattttctctctcctct-a 4727852  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
          |||||||| |   ||| || || ||| ||||||||||||||| ||||||| ||||||||||||    
T  4727851 aaaagatctattttattttaagttgttcataacaacttctcatttgaaactgtttttagattattttta 4727783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 5249349 - 5249445
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||| ||||| |||||| |||||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  5249349 aaacaaataatttagttagtttgaatacaactatataaaagggattttttgttgcaaaattagttcaatcttttaaatcatattttttctctactct 5249445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 2211339 - 2211246
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcc 120  Q
    ||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||| || ||| ||||||| ||||||||||||||||    
T  2211339 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttaatattttaaaccatattttctctctcc 2211246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 6429579 - 6429456
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    ||||||||||||||||| |||||||| |||||||||  ||  ||||||||||||||||||||||||||||| |  |||||||||||||||||||          
T  6429579 aaataatttagtttgttaggatacaactatataaaaacgatatttttgttacaaaattagttcaatcttttgatccatattttctctctcctctaaaaaa 6429480  T
Q  130 nntctattttttaagaagctgctc 153  Q
      |||||||||| |||||||||||    
T  6429479 aatctattttttgagaagctgctc 6429456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 35040983 - 35041074
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttttt-tgttacaaaattagttcaatcttttaaatcatattttctctc 117  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||||||    
T  35040983 aaaacaaataatctagtttgttaggatacaactatataaatgagattttatgttacaaaattagttcaatcttttaaaaaatattttctctc 35041074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 35781368 - 35781458
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctc 117  Q
    ||||||| ||| ||||| |||||||||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  35781368 aaacaaaaaatctagttcgtttggatacaactatataaaatatattttttgttacaaaattagtttaatcttttaaatcatattttctctc 35781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 38184290 - 38184364
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttta 101  Q
    ||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  38184290 aaaacaaataatttagtttgtttgggtacaactatataaaaggattttttgttacaaaattacttcaatctttta 38184364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 38214067 - 38213993
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttta 101  Q
    ||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  38214067 aaaacaaataatttagtttgtttgggtacaactatataaaaggattttttgttacaaaattacttcaatctttta 38213993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 40591314 - 40591461
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||| ||||||||||||||||||||| ||| |||||| |  |||||||||||||||||||| |||| ||||||| ||||||||||||   ||||      
T  40591314 aaacaaatcatttagtttgtttggatacaactat-taaaagggatttttttgttacaaaattagtacaattttttaaaccatattttctct---ctctaa 40591409  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctg 177  Q
          || ||||||| ||||||||||||||| | |||||||||||||||||    
T  40591410 aaaaaatcaattttttgagaagctgctcttaacagcttctcatttgaagctg 40591461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 35039813 - 35039670
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt---aaatcatattttctctctcctctnnnnnnnntcta 135  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||   |||  |||||||| |||||  ||        ||||    
T  35039813 tagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaaaaaaaatattttcgctctc--ctaaaaaaaatcta 35039716  T
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||    
T  35039715 ttttttgagaagctgctcttaggagcttctcatttgaagctgtttt 35039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 43582984 - 43583060
Alignment:
Q  38 tttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  43582984 tttagtttgtttggatacaa--atataaaagggattttttgttacaaaattagttcaatcttttgaatcatattttctc 43583060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 12545977 - 12545884
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||| |||  ||||||||| |  |||||| ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  12545977 aaataatttagtttgtttggattcaaccatataaaagcgatttttttattacaaatttagttcaatattttaaattatattttctctctcctct 12545884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 20515379 - 20515209
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttt--tgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    ||||||||||||||||||||| |||  |||||||||| | ||||  ||||||||||||||||||||||||  |  |||||||||| ||||||||          
T  20515379 aaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccatattttctttctcctct-aaaaa 20515281  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
      |||| ||||| ||||||||||||||| | ||||||||||| | ||||||| | ||| ||||||| ||||||    
T  20515280 aatcta-tttttgagaagctgctcttaacagcttctcatttgtaactgtttttaaattttttttagattctga 20515209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 34383382 - 34383474
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagtt-ttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||| |||||||||| | | |||||||||||||| | |||||||||||||  | |||||||||||||||||    
T  34383382 aaataatttagattgtttggatacaactatataaaagggatattttgttacaaaatcaattcaatcttttaagccttattttctctctcctct 34383474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 35040153 - 35040231
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaat 104  Q
    ||||||||||||||||||||||||||| |||  |||||||| || |||||||||||||| |||||||||| ||||||||    
T  35040153 aaaacaaataatttagtttgtttggattcaaccatataaaaggaattttttgttacaaatttagttcaatattttaaat 35040231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 1349239 - 1349326
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttc 113  Q
    |||| |||||||||||||||||| |||| || |||||||||| | | ||||| ||||||||||||| |||||||| || |||||||||    
T  1349239 aaaataaataatttagtttgtttagatataactatataaaagaaatgttttgatacaaaattagtttaatcttttgaaccatattttc 1349326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 35781701 - 35781642
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaat 86  Q
    |||||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||    
T  35781701 aaacaaataatttagtttgttttgatacaactatataaaagggattttttgttacaaaat 35781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 38494500 - 38494570
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||||||||||  |||||||||  || ||||||||||||||| ||||| ||||||||    
T  38494500 aaataatttagtttgtttggatacatctatataaaagggatttttttgttacaaaactagtttaatctttt 38494570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 25413604 - 25413554
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgtttta 182  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  25413604 tctattttttgagaagctgctcttaacaacttctcatttgaagttgtttta 25413554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 17367599 - 17367498
Alignment:
Q  93 aatcttttaaatcatattttctctctcctctnnnnnnnn-tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattt 191  Q
    ||||||||||||||||||||||||||| |||         |||||||||| ||||||| ||||||| | |||||||||||||||| |||| ||||| |||    
T  17367599 aatcttttaaatcatattttctctctcttctaaaaaaaaatctattttttgagaagctactcttaacagcttctcatttgaagctatttttagatttttt 17367500  T
Q  192 tt 193  Q
    ||    
T  17367499 tt 17367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 19950742 - 19950811
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||| ||||||||||||||||| |  |||||| ||||| ||||| |||||||||||    
T  19950742 aaataatttagtttgtttagatacaattatataaaaggtattttttattacataattatttcaatctttt 19950811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 35039504 - 35039443
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    |||||||||| ||||||||||||||| |||||||| ||||||| |||||| ||||| |||||    
T  35039504 tctattttttgagaagctgctcttaacaacttctcgtttgaagttgtttttagatttttttt 35039443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 18585688 - 18585826
Alignment:
Q  37 atttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntcta 135  Q
    ||||||||||||||||||||| |||||||||  | ||||||||||||||||||       |||||||| ||||||||  ||||||| |          |     
T  18585688 atttagtttgtttggatacaactatataaaaacgattttttgttacaaaatta-------cttttaaaccatattttacctctcctttaattttttattt 18585780  T
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||    
T  18585781 tttttttagaagctgctcttaacagcttctcatttgaagctgtttt 18585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 6538037 - 6537984
Alignment:
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||||| |||||||| |||||| | ||||||||||||||||||||| |||||    
T  6538037 tattttttgagaagctggtcttaacagcttctcatttgaagctgtttttagatt 6537984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 19170348 - 19170284
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||| ||||||  |||||| ||   ||||||||| |||||||||||||||||||    
T  19170348 aataatttagtttgtttgaatacaacgatataagag---tttttgttataaaattagttcaatctttt 19170284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 35781907 - 35781948
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  35781907 aaaacaaataatctagtttgtttggatacaactatataaaag 35781948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 1349962 - 1350017
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||| || ||||||||||||||| |||||||||||| ||| |||||| |||||    
T  1349962 tctatttgttgagaagctgctcttaacaacttctcatttaaagttgtttttagatt 1350017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 7293488 - 7293427
Alignment:
Q  62 ataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctc 122  Q
    ||||||||| |||||| ||| |||||||||| |||||||| | || ||||||||||||||||    
T  7293488 ataaaagagattttttattataaaattagtttaatcttttgactcttattttctctctcctc 7293427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 35781246 - 35781213
Alignment:
Q  90 ttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||| ||||||||||||||||||    
T  35781246 ttcaatcttttaaattatattttctctctcctct 35781213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 9127288 - 9127252
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag 68  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  9127288 aaataatttagtttgtttgaatacaactatataaaag 9127252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 44886171 - 44886347
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||||||||| ||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  44886171 aaacaaataatttagtttttttggatacaactatataaaagggatttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctac 44886270  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |||||||||| |||||||||| |||| | |||||||||||||| |||||| ||||| ||||||| ||||||    
T  44886271 aaaaattctattttttgagaagctgcttttaacagcttctcatttgaagttgtttttagattttttttagattctga 44886347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 54175833 - 54176009
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||| ||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||      
T  54175833 aaaataaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaaccatattttctctctcctctaa 54175932  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          |||||||||| |||||||||||||||   ||||||||||||||||||||| ||||| ||| ||| ||||||    
T  54175933 aaaaaatctattttttgagaagctgctcttaaccgcttctcatttgaagctgtttttagattttttgtagattctga 54176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 19298611 - 19298433
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct- 123  Q
    ||||||||||||||||||||||| |||||| |||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19298611 aaacaaataatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctcta 19298512  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
            |||||||||| ||||||||||||||| | |||||||||||||| |||||| | | | ||||||| ||||||    
T  19298511 aaaaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagttgtttttaaaatttttttagattctga 19298433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 41692433 - 41692593
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||       
T  41692433 aaactaataatttagtttgtttggatacaattatataaaaaggattttttgttacaaaattaattcaatcttttaaatcatattttctctctcctctaaa 41692532  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
         | |||||||| ||||| ||||||||| | |||||||||| ||||| |||| |||||    
T  41692533 aaaaatatattttttgagaagatgctcttaacagcttctcatttaaagctttttttagatt 41692593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 7238984 - 7238810
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagt-tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  7238984 aaacaaataatctagtttgtttggatacaactatataaaagggaatttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctaaa 7238885  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         | |||||||| ||||||||||||||  |  |||||||||||||||||||| ||||| ||||||| ||||||    
T  7238884 aaaatt-tattttttgagaagctgctcttagcagtttctcatttgaagctgtttttagattttttttagattctga 7238810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 2494170 - 2494017
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |        
T  2494170 aacaaataacctagtttgtttggatacaactatataaaagagattttttgttacaaaattaattcaatattttaaatcatattttctctctcctttaaca 2494071  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
        |||||||||| ||||| ||||||||| | ||| |||||||||||| ||||    
T  2494070 aaaatctattttttgagaagttgctcttaacagcttttcatttgaagctatttt 2494017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 200
Target Start/End: Original strand, 50715675 - 50715847
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||||| ||||||||||||||  |||||||||| |  |||||||||||||||||||||||||||||| ||  ||||||||||||||||||      
T  50715675 aaacaaataatttaatttgtttggatacacctatataaaagggatttttttgttacaaaattagttcaatctttttaaatatattttctctctcctct-- 50715772  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttct 200  Q
          |||||||||| ||||| ||| ||||| |||||||||||||| | |||||| ||||| ||||||| ||||    
T  50715773 aaaaaatctattttttgagaagatgcccttaacaacttctcatttgatgttgtttttagattttttttagattct 50715847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 5029059 - 5028893
Alignment:
Q  37 atttagtttgtttggatacaattatataaaagagttttt---tgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntc 133  Q
    ||||| ||||||||||||||| |||||| ||| | ||||   |||| ||||||||||||||||||  |||||||||||||||||||||||              
T  5029059 atttaatttgtttggatacaactatatacaagggattttatttgttccaaaattagttcaatctt--aaatcatattttctctctcctctaaaaaaaaat 5028962  T
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||| ||||| ||||||| ||||||    
T  5028961 tattttttaagaagctgctcttgaaagcttctcatttgaagctgtttttagattttttttagattctga 5028893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 9519024 - 9519148
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||||||||||||||||||||||| ||   || ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||        
T  9519024 aaacaaataatttagtttgtttggatacaacta---aagaga-ttttttgttacaaaattagttcaatcttttaaatcatattttccctctcctct-aaa 9519118  T
Q  128 nnnntctattttttaagaagctgctcttaa 157  Q
        |||||||||| |||||||||||||||    
T  9519119 aatatctattttttgagaagctgctcttaa 9519148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 11125965 - 11126115
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagt-tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||| ||||||||||||||||||||||||||  ||||| ||||||||||||           
T  11125965 aaataatttagtttgtttgaatacaactacataaaagagtattttttttacaaaattagttcaatcttttaaaaaatattatctctctcctct-aaaaaa 11126063  T
Q  131 ntcta-ttttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
     |||| |||||| ||||| ||||||||| | |||||||||||||||||||||    
T  11126064 atctatttttttgagaagatgctcttaacagcttctcatttgaagctgtttt 11126115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 39136150 - 39136020
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||| |||| ||||||||||| |||||||||  | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||       
T  39136150 aaacaaataattttgtttttttggatacaactatataaaaataattttttgttacaatattagttcaatcgtttaaatcatattttctctctcctctaaa 39136051  T
Q  127 nnnnntctattttttaagaagctgctcttaa 157  Q
         |||||||||| |||||||||| ||||    
T  39136050 aaaaatctattttttgagaagctgctattaa 39136020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 49897448 - 49897287
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagagttt-tttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||| ||||||| |||||||||||||||||| |||||||||| | || ||||||||||||||||||||||||||||||  |||||||||| |||||||      
T  49897448 aaaataaataatctagtttgtttggatacaactatataaaagggattatttgttacaaaattagttcaatcttttaaacaatattttctccctcctctaa 49897349  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctca-tttgaagctgttttaagat 186  Q
          | |||||||| ||||| ||||||||| ||||||| | ||||||| |||||| ||||    
T  49897348 aaaaaatttattttttgagaagttgctcttaacaacttcttattttgaagttgtttttagat 49897287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 53130944 - 53130855
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcc 120  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |  |||| |||||||||||    
T  53130944 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttgacccataatttctctctcc 53130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 41103999 - 41104094
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||  ||||| ||| ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41103999 aaacaaataatccagtttatttcgatacaactatataaaaggactttttgttacaaaattagttcaatcttttaaatcatattttctctttcctct 41104094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 4780735 - 4780602
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||  ||||| | ||||||||||        |||| ||    
T  4780735 tagtttgtttggatacaactatataaaagagattttttattacaaaattagttcaatcttttaaacaatattatgtctctcctctaaaaaaaatctaatt 4780636  T
Q  139 tttaagaagctgctcttaataacttctcatttgaa 173  Q
    ||||| ||||||||||||| | |||||||||||||    
T  4780635 tttaa-aagctgctcttaacagcttctcatttgaa 4780602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 29100821 - 29100921
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgtt-acaaaattagttcaatcttttaaatcatattttctctctcctc 122  Q
    ||||||||||||||||||||||||||||||| |||||||||      ||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  29100821 aaaacaaataatttagtttgtttggatacaactatataaaaataattttttttgtttacaaaattagttcaatcttttaaattatattttctctctcctc 29100920  T
Q  123 t 123  Q
    |    
T  29100921 t 29100921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 43495825 - 43496007
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--------ttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    |||||||||||||| |||||||| |||||| |||||||||| |        |||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  43495825 aaacaaataatttaatttgtttgtatacaactatataaaagggatgagattttttttattacaaaattagtttaatcttttaaaacatattttctctctc 43495924  T
Q  120 ctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||||        |||| ||||| ||||||||||||||| | ||||| ||||||| || |||| ||||| || |||| ||||||    
T  43495925 ctctaaaaaagatctaatttttgagaagctgctcttaacagcttcttatttgaatctatttttagatttttgttagattctga 43496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 660168 - 660326
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    ||||||||||| ||||||||||| |||||| || ||||||| | ||||  |||||||||||||| |||||||||||  ||||||||||||||||||        
T  660168 aaacaaataatctagtttgtttgaatacaactacataaaagggattttatttacaaaattagtttaatcttttaaaaaatattttctctctcctct-aac 660266  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
        |||||||||| ||||| || | |||| | |||||||||||||| |||||| |||||    
T  660267 aaaatctattttttgagaagttgttgttaacagcttctcatttgaagatgtttttagatt 660326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 13222184 - 13222272
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctct 118  Q
    |||||||||||||||||| |||||| ||||||||||| |  |||||||||||||||||||||||||||||| |  ||||||||||||||    
T  13222184 aaataatttagtttgtttagatacagttatataaaagtgatttttttgttacaaaattagttcaatcttttgatccatattttctctct 13222272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 24739089 - 24738973
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    |||||| |||||||||||||||||| ||||||| |||||| ||||||||||||        | || ||||| ||||| | ||||||| |||||||| |||    
T  24739089 ttttttattacaaaattagttcaattttttaaaccatattatctctctcctctaagaaatatttagtttttgagaagttactcttaaaaacttctctttt 24738990  T
Q  171 gaagctgttttaagatt 187  Q
    |||||||||||||||||    
T  24738989 gaagctgttttaagatt 24738973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 27814510 - 27814400
Alignment:
Q  92 caatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattt 191  Q
    ||||||| ||||  ||||||||||||||||||        ||||||||||  |||||||||||||| | ||||||||||||||||||||  |||||||||    
T  27814510 caatcttgtaaacaatattttctctctcctctaaaaaaaatctatttttttcgaagctgctcttaacagcttctcatttgaagctgtttatagattattt 27814411  T
Q  192 ttaggttctga 202  Q
    |||| ||||||    
T  27814410 ttagattctga 27814400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 12928554 - 12928725
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaa-atcatattttctctctcctctnnnnnn 129  Q
    |||||||||||||||||||||||||  |||| ||||  | |||||||||||||||||||||||||||||||| ||   ||||||||| ||||||          
T  12928554 aaataatttagtttgtttggatacatctataaaaaaatgattttttgttacaaaattagttcaatcttttaacatttgattttctctgtcctctaaaaaa 12928653  T
Q  130 nntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
      |||||||||| ||||  || ||||||  |||||| |||||||| |||||| | ||| ||||||| ||||||    
T  12928654 aatctattttttgagaaattgttcttaa-cacttcttatttgaagttgtttttaaattttttttagattctga 12928725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 27839057 - 27838986
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatct 97  Q
    ||||||||||| |||||||||||||||||| |||| ||||  || |||||||||||||||||||||||||||    
T  27839057 aaacaaataatctagtttgtttggatacaactatacaaaagggatttttttgttacaaaattagttcaatct 27838986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 29618243 - 29618335
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||| ||||||| ||||||||| || ||| || |||||||||||||| |||||||| || | |||||||||| ||||||    
T  29618243 aaataatttagtttgtttagatacaactatataaaaaagatttgttattacaaaattagtttaatcttttgaaacctattttctctttcctct 29618335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 33803022 - 33802970
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  33803022 ttttttgttacaaaattagttcaatcttttaatacatattttctctctcctct 33802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 36889762 - 36889670
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||   |||||||  | ||||||||||||||||||||||||||||||||    | |||||||||||||||    
T  36889762 aaataatttagtttgtttggatacaacggtataaaaatgattttttgttacaaaattagttcaatcttttaacctttgttttctctctcctct 36889670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 42314512 - 42314420
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttc-aatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||| |||||||||| |  |||| || |||||||||||| |||||||| |  | |||||||||||||||||    
T  42314512 aaataatttagtttgtttggatacaactatataaaaggggatttttttgcaaaattagttcaaatcttttgacccttattttctctctcctct 42314420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 42816018 - 42815901
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    |||||| ||||||||||||||| |||||||| |||||||||||||||||||||        | | ||||||| |||| ||||||||| | ||||||||||    
T  42816018 tttttttttacaaaattagttcgatcttttagatcatattttctctctcctctaaaattttt-ttttttttaggaagttgctcttaacagcttctcattt 42815920  T
Q  171 gaagctgttttaagattat 189  Q
    |||| | |||| |||||||    
T  42815919 gaagttttttttagattat 42815901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 19299936 - 19300025
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcc 120  Q
    ||||||||||||||| ||||||| |  ||||||||| || ||||||| ||||||||||||||||| |||| |  ||||||||||||||||    
T  19299936 aaataatttagtttgcttggatatagctatataaaatgatttttttgctacaaaattagttcaattttttgacccatattttctctctcc 19300025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 7070563 - 7070475
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||  |||||| |||| |||||||||| || ||| |||||||||||| |  |||||||| ||||||||||    
T  7070563 aatttagtttgtttggatacaacaatataagagagattttttgttataagatttgttcaatcttttgacccatattttatctctcctct 7070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 24739160 - 24739120
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24739160 aaacaaataatttagtttgtttggatacaattatataaaag 24739120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 11125267 - 11125342
Alignment:
Q  43 tttgtttggatacaattatataaaagagtttttt-gttacaaaattagttcaatcttttaaatcatattttctctc 117  Q
    ||||||||||||||| |||||||||| | ||||| || |||||||||||||||||||||||  | |||||||||||    
T  11125267 tttgtttggatacaactatataaaagggatttttagtaacaaaattagttcaatcttttaacccttattttctctc 11125342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 29993478 - 29993344
Alignment:
Q  52 atacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgc 151  Q
    ||||||| ||||||||   |||||||||||||||||||||||||||||| || | |||||||   || ||||        |||||||||| |||| || |    
T  29993478 atacaatcatataaaatgattttttgttacaaaattagttcaatcttttgaaacttattttc---cttctctaaaaaaaatctattttttgagaacctac 29993382  T
Q  152 tcttaataacttctcatttgaagctgttttaagattat 189  Q
    |||||| ||||||| |||||||| |||||| |||||||    
T  29993381 tcttaacaacttctaatttgaagttgtttttagattat 29993344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 49867154 - 49867265
Alignment:
Q  79 tacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgt 178  Q
    |||||||||||||||||||||  |  ||||||||||| |||||||        |||||||||| |||||||||||| || | |||||||||||||||| |    
T  49867154 tacaaaattagttcaatctttagatccatattttctcactcctctaaaaacaatctattttttgagaagctgctctcaacagcttctcatttgaagctat 49867253  T
Q  179 tttaagattatt 190  Q
    ||| | ||||||    
T  49867254 ttttacattatt 49867265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 54806935 - 54806864
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatct 97  Q
    |||||||||||| ||||||||||||||| || ||||||||| |  |||||||||| ||||||||||||||||    
T  54806935 aaaacaaataatctagtttgtttggatataactatataaaatggattttttgttataaaattagttcaatct 54806864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 45031124 - 45031070
Alignment:
Q  148 ctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  45031124 ctgctcataacagcttctcatttgaagctgttttaagattatttttagattctga 45031070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 2494656 - 2494586
Alignment:
Q  32 aaataatttagtttgtttggatacaat-----tatataaaagag--ttttttgttacaaaattagttcaat 95  Q
    |||||||||||||||||||||||||||     ||||||||||||  |||||||||||||||||| ||||||    
T  2494656 aaataatttagtttgtttggatacaatacaactatataaaagagatttttttgttacaaaattaattcaat 2494586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 6046487 - 6046349
Alignment:
Q  52 atacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctct--ctcctctnnnnnnnntctattttttaagaagc 148  Q
    |||||| |||||| ||||| |||||||||| |||||||||||||||||| |||   ||||||||||  ||| | |        |||||||||| ||||||    
T  6046487 atacaactatatagaagagattttttgttataaaattagttcaatctttcaaacattattttctctttctcttttaaaaaaaatctattttttgagaagc 6046388  T
Q  149 tgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||||| | |||||||||||||| | |||| |||||    
T  6046387 tgctcttaacagcttctcatttgaagttatttttagatt 6046349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 7770317 - 7770231
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaa-tcttttaaatcatattttctct 116  Q
    |||||||||||||||||| |||||   | |||||||| | |||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  7770317 aaataatttagtttgttttgatactgctgtataaaagcaattttttgttataaaattagttcaattcttttaatccatattttctct 7770231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 42882045 - 42882114
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt 100  Q
    ||||| ||||||||||||  || ||  |||||||||| | ||||||||||||||||||||||||||||||    
T  42882045 aaatagtttagtttgtttacattcagctatataaaagcgattttttgttacaaaattagttcaatctttt 42882114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 28451662 - 28451729
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttt 99  Q
    |||||||||||||||||||||||||| |||  ||| |  ||||| |||||||||||| | ||||||||    
T  28451662 aaataatttagtttgtttggatacaagtattgaaatggatttttggttacaaaattactacaatcttt 28451729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 45132973 - 45133024
Alignment:
Q  151 ctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||||||| ||||||| |||| |||||||||| ||||||||||||| ||||||    
T  45132973 ctcttaacaacttcttatttaaagctgtttttagattatttttagattctga 45133024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 53140256 - 53140299
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagc 175  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||    
T  53140256 tctattttttaagaagttgctcttaacaacttctaatttgaagc 53140299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 18415566 - 18415473
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||| ||| |||||| |||| |||| |   |||||| |||| ||||||||||| |||||| || ||  |||||||||||||||    
T  18415566 aaataatttagtttgcttgcatacaactataaaaaataaatttttttattaccaaattagttcattcttttgaaccaagttttctctctcctct 18415473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 46255234 - 46255326
Alignment:
Q  34 ataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaa--ttagttcaatcttttaaatcatattttctctctcctc 122  Q
    ||||||||||||||||| |||||| |||||||||  ||  ||||||||||||||  |||||| |||||||  |  |||| |||||||||||||    
T  46255234 ataatttagtttgtttgaatacaactatataaaagtgatctttttgttacaaaattttagtttaatctttagatccataatttctctctcctc 46255326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 17554871 - 17554802
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaa-agagttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||| ||||||| |||||||| |   ||||||| ||||||||||||| ||| ||||    
T  17554871 aaataatttagtttgtttagatacaactatataaatatgattttttgctacaaaattagttaaatatttt 17554802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 32640811 - 32640758
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaatta 88  Q
    |||||||||||||||||||||| |||||||||  | |||||| |||||||||||    
T  32640811 aatttagtttgtttggatacaaatatataaaataatttttttattacaaaatta 32640758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 6046728 - 6046696
Alignment:
Q  48 ttggatacaattatataaaagagttttttgtta 80  Q
    |||||||||| ||||||||||||||||||||||    
T  6046728 ttggatacaactatataaaagagttttttgtta 6046696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 16436053 - 16436085
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaatta 60  Q
    ||||||||||||||||||||||||||| |||||    
T  16436053 aaacaaataatttagtttgtttggatataatta 16436085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 19300399 - 19300443
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagtttttt 76  Q
    |||||||||||||||||| ||||||| |||||||||  |||||||    
T  19300399 aaataatttagtttgtttagatacaactatataaaatggtttttt 19300443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 36638591 - 36638538
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||||||| ||||||||||  ||| ||||| ||||||||||||||||| |||||    
T  36638591 tctatttttttagaagctgct--taacaacttatcatttgaagctgtttttagatt 36638538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 205245 - 205412
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||        
T  205245 aaacaaataatctagtttgtttagatacaactatataaaagaattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctaaaa 205344  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
        |||||||||| |||||||||||||||   |||||||||||||| |||||| |||||||||||||    
T  205345 aaaatctattttttgagaagctgctcttaacggcttctcatttgaagttgtttttagattatttttag 205412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 106165 - 105998
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| | |||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  106165 aaacaaataatcttgtttgtttggatacaactatataaaaaggattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-ac 106067  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
         |||||||||| ||||| || |||||| | |||||||||||||| |||||| |||||||||||||    
T  106066 aaaaatctattttttgagaaggtgttcttaacagcttctcatttgaagttgtttttagattatttttag 105998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 43326049 - 43325882
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||        
T  43326049 aacaaataatttaatttgtttggatacaattatataaaagggattttttgttacaaaattagtttaatcttttaaaacatattttctctctcctctaaaa 43325950  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
        |||||||||||||||||||||||||| |  ||||||||||||| ||| || |||||||||||||    
T  43325949 aaaatctattttttaagaagctgctcttaacagtttctcatttgaagttgtctttagattatttttag 43325882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 17054225 - 17054400
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||| ||||||| ||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  17054225 aaacaaataatctagtttgtttcgatacaactatataaaatgaattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctctaaa 17054324  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         | |||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||||| ||||||    
T  17054325 aaaaatatattttttgagaagctgctcttaacagcttctcattttaagctgtttttagattatttttagattctga 17054400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 47795150 - 47794977
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||| ||| ||||||||||| |||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||||       
T  47795150 aaacaaataatttattttttttggatacaaatatataaaatggattttttgttacaaaattagttcaaacttttaaatcatattttctctctcctctaaa 47795051  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
          ||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||    
T  47795050 aaaa--ctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagattatttttagattctga 47794977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 6844461 - 6844636
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||       
T  6844461 aaacaaataatctagtttgtttggatgcaactatataaaagagattttttgttacaaaattagtttaatcttttaaataatattttctctctcctctaaa 6844560  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         | |||||||| |||||||  |||||| | |||||||||||||| |||||| ||||||||||||| ||||||    
T  6844561 aaaaatatattttttgagaagcttatcttaacagcttctcatttgaaggtgtttttagattatttttagattctga 6844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 11981711 - 11981884
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    ||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||  ||||||| | ||| ||||        
T  11981711 aaacaaataatctagtttgtttggatacaactatataaaagggatttttgttacaaaattagttcaatcttttaaacaatatttt-tttctactctaaaa 11981809  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
        |||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||| ||||||| ||||||    
T  11981810 aaaatctatttttttagaagctgctcttaacagcttctcatttgaagctgtttttagattttttttagattctga 11981884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 24686191 - 24686365
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||  |||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||||||||||       
T  24686191 aaacaaataatctagtttgtttggatacagctatataaaagcgattttttgttacaaaattagttcaatcttttaatccatattttctctctcctct-ta 24686289  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         |||||||||| ||||| ||||||||| | |||||||||||||| |||||| ||||||||||||| ||||||    
T  24686290 aaaaatctattttttgagaagttgctcttaacagcttctcatttgaagttgtttttagattatttttagattctga 24686365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 49243777 - 49243932
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||  |||||||||||||| |||       
T  49243777 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaaagatattttctctctcatctaaa 49243876  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttta 182  Q
         |||||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  49243877 aaaaatctattttttgagaagctgctcctaacagcttctcatttgaagctgtttta 49243932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 47795527 - 47795354
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||| ||||| | |||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||       
T  47795527 aaacaaataatctagtttgttttgatacgactatataaaagggattttttgttacaaaattagctcaatcttttaaattatattttctctctcctct-aa 47795429  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         |||||||||| || | |||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  47795428 aaaaatctattttttgag-acctgctcttaacaacttctcatttgaagctgtttttagattttttttagattctga 47795354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 47795935 - 47796109
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    |||||||||| |||||||||| ||||| | |||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||        
T  47795935 aacaaataatctagtttgttttgatacgactatataaaaggaattttttgttacaaaattagctcaatcttttaaattatattttctctctcctctaaaa 47796034  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
        |||||||| |   ||||||||  ||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  47796035 aaaatctattttattttaagctgcttctaacaacttctcatttaaagctgtttttagattatttttagattctga 47796109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 39842807 - 39842939
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnnnnntctattttttaagaagctgctcttaataacttctcatt 169  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||||||||| |||||||||||| |||| |||||||||    
T  39842807 ttttttgttagaaaattagttcaatcttttaaatcatattttctctctcctctaaaaaaaaatctattttttgagaagctgctctcaatagcttctcatt 39842906  T
Q  170 tgaagctgttttaagattatttttaggttctga 202  Q
    ||||| |||||| ||||||||||||| ||||||    
T  39842907 tgaagttgtttttagattatttttagattctga 39842939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 193
Target Start/End: Original strand, 48738494 - 48738658
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnn 127  Q
    ||||||||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||||        
T  48738494 aacaaataatttagtttgtttagatacaactgtataaaagtgattttttgttacaaaattagttcaatcttttaaacaatattttctctctcctct-aaa 48738592  T
Q  128 nnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
        |||||||||| | || ||| |||||| | |||||||||| |||||||||| |||||||||||    
T  48738593 aaaatctatttttttaaaaactgatcttaacatcttctcatttaaagctgtttttagattattttt 48738658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 24705406 - 24705530
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||        | |||||||| |||| |||||||||| | ||||||||||    
T  24705406 ttttttgttacaaaattagttcaatcttttaaaatatattttctctctcctctaaaaaatatttattttttgagaaactgctcttaacagcttctcattt 24705505  T
Q  171 gaagctgttttaagattatttttag 195  Q
    ||||||||||| |||||||||||||    
T  24705506 gaagctgtttttagattatttttag 24705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 26271931 - 26272098
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||||||||||||||||||||  |||||| ||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||  |||||||||      
T  26271931 aaacaaataatttagtttgtttcaatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaaccatatttttcctctcctct-a 26272029  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
          |||||||||| |||||||| || ||||| ||||||| |||||| |||||| ||||| ||||||    
T  26272030 aaaaaatctattttttgagaagctggtcctaatagcttctcaattgaagttgtttttagatttttttta 26272098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 33674978 - 33675106
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||       
T  33674978 aaacaaataatttaatttgattggatacaactatataaaagagattttttgttacaaaattaattcaatcttttaaacaatattttctctctcctctgaa 33675077  T
Q  127 nnnnntctattttttaagaagctgctctt 155  Q
         |||||||||||||||||| |||||    
T  33675078 caaaatctattttttaagaagctactctt 33675106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 47793174 - 47793050
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    ||||| ||||||||||||||| ||| ||| |||||||||||||||||||||||        |||||||||| ||||||||||||||| ||||||||||||    
T  47793174 tttttcgttacaaaattagtttaatttttaaaatcatattttctctctcctctaaaaaaaatctattttttgagaagctgctcttaacaacttctcattt 47793075  T
Q  171 gaagctgttttaagattatttttag 195  Q
    ||||||||||| ||||| |||||||    
T  47793074 gaagctgtttttagattttttttag 47793050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 12016839 - 12017008
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||||||  |||||| || ||   |||||||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  12016839 aaaacaaataatttagtttgtttggatacagctatatataaaaggaattttttgttataaaattagttcaatcttttaatccatattttttctctcctct 12016938  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
            |||||||||| | ||||| ||||||| | |||||||||||||| |||||| ||||| |||||    
T  12016939 aaaaaaaatctatttttttataagcttctcttaacagcttctcatttgaagttgtttttagatttttttt 12017008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 49480334 - 49480159
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||||| ||||||| ||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||| |||||||||       
T  49480334 aaacaaataatctagtttgttttgatacaactatgtaaaaggaattttttgttacaaaattagttcaatctttaaaatgatattttcgctctcctctaaa 49480235  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
           |||||||| |||||||||||| || | |||||| |||||||||||||| | ||| ||||||| ||||||    
T  49480234 aaaaaaatattttttgagaagctgctctcaacagcttctcgtttgaagctgtttttatattttttttagattctga 49480159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 42429596 - 42429769
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaa-atcatattttctctctcctctnnnnn 128  Q
    |||||||||||||||||||||||||  |||||||||| |  |||||||||||||||  | ||||||||||| | ||   ||||||||||||||||         
T  42429596 aaataatttagtttgtttggatacatctatataaaagggatttttttgttacaaaacaaattcaatcttttgatatttgattttctctctcctctaaaaa 42429695  T
Q  129 nnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
       |||||||||| ||||||||||||||| | ||||||||||||| ||||||| ||||||||||||| ||||||    
T  42429696 taatctattttttgagaagctgctcttaacagcttctcatttgaaactgtttttagattatttttagattctga 42429769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 33241077 - 33241252
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttt-tttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||||||||||| ||| |||  ||||||||| | || ||||||||||| |||||||||| |||||||| |||||||||| |||||||       
T  33241077 aaacaaataatttagtttgtttagattcaaccatataaaagggattctttgttacaaatttagttcaatattttaaattatattttctccctcctctaaa 33241176  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         |||| ||||| ||||||||||||||| | ||||| |||||||| ||||||  |||| ||||||| ||||||    
T  33241177 aaaaatctagtttttgagaagctgctcttaacagcttctaatttgaagttgttttttgattttttttagattctga 33241252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 52404268 - 52404104
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag------ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 121  Q
    ||||||||||| ||||||||| |||||||| |||||||||| |      |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  52404268 aaacaaataatctagtttgttgggatacaactatataaaagggatttttttttttgttataaaattagttcaaacttttaaatcatattttctctctcct 52404169  T
Q  122 ctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||        | |||||||| |||||||||||| || | |||||||||||||| |||||| |||||    
T  52404168 ctaaaaaaaat-tattttttgagaagctgctctcaagagcttctcatttgaagttgtttttagatt 52404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 45807979 - 45808157
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattt--tctctctcctct 123  Q
    ||||||||||| |||||||||||||||||  ||||||||||||  |||||| ||||||||||||||||| ||||||||  ||||||  ||||||||||||    
T  45807979 aaacaaataatctagtttgtttggatacacctatataaaagagatttttttattacaaaattagttcaaccttttaaacaatattttctctctctcctct 45808078  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
            | |||||||| ||||| |||||| || ||||| |||||||||| |||||| ||| | ||||||| ||||||    
T  45808079 aaaaaaaatatattttttgagaagttgctctaaacaacttatcatttgaagttgtttttagaatttttttagattctga 45808157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 42834906 - 42835001
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||||  | |||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  42834906 aaaacaaataatttagtttgtttggata--actatataaaagggattttttgttacaaaattagttcaatcttttaatctatattttctctctcctct 42835001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 47796285 - 47796454
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-- 123  Q
    |||||||||||| | |||||||| ||||||| |||||||||||  |||||| ||||||||||||||| ||||||||||  |||||||||||||| |||      
T  47796285 aaaacaaataatctcgtttgtttagatacaactatataaaagaaattttttattacaaaattagttctatcttttaaagaatattttctctctcgtctaa 47796384  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
            | |||||||| ||||||||||||||| | ||||||||||||| ||||||| ||||| |||||    
T  47796385 aaaatatatatattttttgagaagctgctcttaacagcttctcatttgaaactgtttttagatttttttt 47796454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 10338311 - 10338205
Alignment:
Q  97 ttttaaatcatattttctctctcctctnnnnnnnn-tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
    |||||||||||||||||||||||||||         |||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  10338311 ttttaaatcatattttctctctcctctaaaaaaaagtctattttttgagaagctgctcttaacagcttctcatttgaagctgtttttagattatttttag 10338212  T
Q  196 gttctga 202  Q
     ||||||    
T  10338211 attctga 10338205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 43115048 - 43114911
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatc-atattttctctctcctctnnnnnn 129  Q
    |||||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||          
T  43115048 aaataatttagtttgtttggatacagctatataaaatcgattttttgttacaaaattagtttaatcttt-aaatctatattttctctctcctctaaaaaa 43114950  T
Q  130 nntctattttttaagaagctgctcttaataacttctcat 168  Q
      |||||||||| |||||||||||| || | ||||||||    
T  43114949 aatctattttttgagaagctgctctcaacagcttctcat 43114911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 6941353 - 6941531
Alignment:
Q  28 aaacaaataatttagtttgtttggata----caattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| ||||||||||| |||    ||| ||||| |||  | ||||||||||||||| | ||||||||||||||  ||||||| ||||||||||    
T  6941353 aaacaaataatctagtttgtttgcatatatacaactatatcaaatggatttttgttacaaaataacttcaatcttttaaaaaatattttttctctcctct 6941452  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
            | |||||||| |||||||||| |||| | ||||||||||||||||||||| ||||| ||||| | ||||||    
T  6941453 aaaaaaaatatattttttgagaagctgcttttaacagcttctcatttgaagctgtttttagattttttttggattctga 6941531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 8795467 - 8795303
Alignment:
Q  32 aaataatttagtttgtttggatacaattata-taaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnn 129  Q
    ||||||||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||||||| ||||||    || ||||||||||||||          
T  8795467 aaataatttagtttgtttggataaatctataattaaagagattttttgttacaaaattagttcaatattttaacatttaatttctctctcctctaaaaaa 8795368  T
Q  130 nn-tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
       |||||||||| ||||| ||||||||| | ||||||||||||||||||||| |||| ||||||    
T  8795367 aaatctatttttttagaagttgctcttaacagcttctcatttgaagctgtttttagatgattttt 8795303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 42834704 - 42834526
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    |||||||||||| |||||||||| ||||||  |||||||||  || |||||||| ||||||||||||||||||||||||  ||||||||| |||||| |     
T  42834704 aaaacaaataatctagtttgtttagatacagctatataaaatggatttttttgtgacaaaattagttcaatcttttaaacaatattttctatctcctata 42834605  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctg-ttttaagattatttttaggttctga 202  Q
           |||||||||  ||||| || |||||| | ||||||||||||||  | ||||  |||||||||||| ||||||    
T  42834604 aaaaaaatctatttttcgagaagttgttcttaacatcttctcatttgaagaagtttttttgattatttttagattctga 42834526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 43114747 - 43114833
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctct 116  Q
    ||||||||||||||||||||||| || ||||||||||||  ||||||||| |||||||||||||||||||| |  ||||||||||||    
T  43114747 aaataatttagtttgtttggatataactatataaaagagatttttttgttgcaaaattagttcaatcttttgacccatattttctct 43114833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 45296864 - 45296767
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||| ||||||||||||| |||||| | || |||| ||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  45296864 aaacaaatagtttagtttgtttgaatacaactttacaaaaagagattttttattacaaaattagttcaatcttttaaactatattttctctctcctct 45296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 6318917 - 6318997
Alignment:
Q  38 tttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctc 117  Q
    |||| ||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||||    
T  6318917 tttaatttgtttggatgcaactatataaaagggattttttgttacaaaattagttcaatcttttaatccatattttctctc 6318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 45378339 - 45378493
Alignment:
Q  32 aaataatttagtttgtttggatacaatt-atataaaagag-ttttttgttacaaaattagttcaatctttt-aaatcatattttctctctcctctnnnnn 128  Q
    ||||||||||||||||||||||||  || ||||||||| | ||||||||||||||| |||||||||||||| | ||   |||||||||  ||| |         
T  45378339 aaataatttagtttgtttggatactttttatataaaagggattttttgttacaaaactagttcaatcttttgacatttaattttctcttccctttaaaaa 45378438  T
Q  129 nnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaa 183  Q
       |||||||||| |||||||||||| || | |||||||||||||||| ||||||    
T  45378439 aaatctattttttgagaagctgctctgaacagcttctcatttgaagctcttttaa 45378493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 40793031 - 40793103
Alignment:
Q  48 ttggatacaattatataaaagagtttttt-gttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    |||||||||| || |||| |||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  40793031 ttggatacaactacataagagagatttttcgttacaaaattagttcaatcttttaaaacatattttctatctc 40793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 47794873 - 47794817
Alignment:
Q  59 tatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttct 114  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  47794873 tatataaaagggattttttgttacaaaattagttcaatcttttaaaccatattttct 47794817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 11981121 - 11981265
Alignment:
Q  40 tagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntcta 135  Q
    |||||||||||||||||  ||||||||||||    |||| | |||||||| ||||||||||||||||    |||||||||||||||||        || |    
T  11981121 tagtttgtttggatacatctatataaaagagatttttttattttacaaaactagttcaatcttttaacatttattttctctctcctctaaaaaaaatcca 11981220  T
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgttt 180  Q
    |||||| ||||| | ||||||| | |||||||||||||| |||||    
T  11981221 ttttttgagaagttactcttaacagcttctcatttgaagttgttt 11981265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 11981505 - 11981413
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    |||||||||||| ||||||||||| |||||| |||||||||| |    |||||||||| ||||||||||||||  ||||||  ||||||||||    
T  11981505 aaaacaaataatctagtttgtttgtatacaactatataaaagggatttttttttgttaaaaaattagttcaattatttaaacaatattttctc 11981413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 6614355 - 6614289
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttc 92  Q
    |||||||||||||||||| |||  |||||| |||||||||  || ||||||||||||||||||||||    
T  6614355 aaacaaataatttagtttatttaaatacaactatataaaagggatttttttgttacaaaattagttc 6614289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 47882428 - 47882483
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||||    
T  47882428 tctattttttgagaagttactcttaacaacttctcatttgaagttgttttaagatt 47882483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 46675789 - 46675732
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaatta 88  Q
    ||||||||||||||||| |||||||  ||| |||||||| ||||||||||||||||||    
T  46675789 aaataatttagtttgttaggatacacctatgtaaaagagattttttgttacaaaatta 46675732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 10066476 - 10066528
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||| |||||||||||| ||||| |||||  ||||||||||||||||||    
T  10066476 ttttttgtcacaaaattagtttaatctattaaaatatattttctctctcctct 10066528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 26182804 - 26182871
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||||||||| ||| | ||||||||||||  ||||||| | |||| ||||||||||||||    
T  26182804 aaataatttagtttgtttgaatatatttatataaaagaaatttttgtca-aaaagtagttcaatctttt 26182871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 6941694 - 6941636
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaa--agagttttttgttacaaa 84  Q
    ||||||||||| |||||||||||||||||| |||| |||  |||| |||||||||||||    
T  6941694 aaacaaataatctagtttgtttggatacaactatacaaaagagagctttttgttacaaa 6941636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 46675718 - 46675667
Alignment:
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||| ||||| ||||||||| | ||||||||||||||||||||| |||||    
T  46675718 ttttttgagaagttgctcttaacatcttctcatttgaagctgtttttagatt 46675667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 9626180 - 9626238
Alignment:
Q  31 caaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaatta 88  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||| |||||| ||||||    
T  9626180 caaataatttcgtttgtttggaaacaactatataaaagagattttatgttacgaaatta 9626238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10106031 - 10105986
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctct 116  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||    
T  10106031 ttttttgttacaaaattagttcaatcatttaatccgtattttctct 10105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20725874 - 20725834
Alignment:
Q  37 atttagtttgtttggatacaattatataaaagagttttttg 77  Q
    |||||||||| |||||||||||| |||||||||| ||||||    
T  20725874 atttagtttggttggatacaattgtataaaagagatttttg 20725834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 21072631 - 21072683
Alignment:
Q  35 taatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaat 86  Q
    |||||| |||||||| ||||||||||||||||| || | ||||||||||||||    
T  21072631 taattttgtttgtttagatacaattatataaaatgaatattttgttacaaaat 21072683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 47794686 - 47794658
Alignment:
Q  29 aacaaataatttagtttgtttggatacaa 57  Q
    |||||||||||||||||||||||||||||    
T  47794686 aacaaataatttagtttgtttggatacaa 47794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 35526476 - 35526644
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||||| |||||||||| |    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  35526476 aaacaaataatttagtttgtttggatacaactatataaaagggatttttttttgttacaaaattagtttaatcttttaaattatattttctcgctcctct 35526575  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttt 192  Q
            |||||||||| |||||||||| |||| | ||||||||||||||||||||| ||||| ||||    
T  35526576 aaaaaaaatctattttttgagaagctgcttttaacagcttctcatttgaagctgtttttagattctttt 35526644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 26246721 - 26246552
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| || ||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||       
T  26246721 aaacaaataatctaatttgtttggatacaactttataaaagagattttttgttacaaaattagtttaatcttttaaaccctattttctctctcctctaaa 26246622  T
Q  127 nnnnntctattttttaagaagctgctcttaata-acttctcatttgaagctgttttaagattatttttag 195  Q
         |||||||||| ||||||| ||||||| |  ||||||||||||||||||||| |||||||||||||    
T  26246621 aaaaatctattttttgagaagcttctcttaacaggcttctcatttgaagctgtttttagattatttttag 26246552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 38319942 - 38320108
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||      
T  38319942 aaaacaaataatctagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaaccatattttctatctcctctaa 38320041  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
          | |||| ||| |||||||||| |||| | |||||||||||||| |||||| ||||| |||||    
T  38320042 aataatt-tattgttttagaagctgctattaacagcttctcatttgaagttgtttttagatttttttt 38320108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 10283394 - 10283217
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct--n 124  Q
    |||||||||||||||||||||| ||||||  |||||||||| | |||||||||||||||||||||||||| |||||| ||||||| |||||||||||       
T  10283394 aaacaaataatttagtttgtttcgatacagctatataaaagggattttttgttacaaaattagttcaatcgtttaaaccatatttcctctctcctctaaa 10283295  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
           |||||||| |   ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10283294 aaaaaaatctattttattttaagctgcttctaataacttctcatttgaagctgttttaagattatttttagattctga 10283217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 30122012 - 30121871
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||| |||||||      
T  30122012 aaaacaaataatttagtttgtttggatacaactatataaaaagaattttttgttacaaaattagttcaatcttttaatccatattttctccctcctctaa 30121913  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctca 167  Q
          |||||||||| ||||||||||||||| | |||||||    
T  30121912 aaaaaatctattttttgagaagctgctcttaacagcttctca 30121871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 26970721 - 26970895
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagt-tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||| |||||||  |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||  ||||||||||||||||||       
T  26970721 aaacaaataatctagtttgcatggatacaattatataaaagggactttttgttacaaaattagttcaatcttttaaacaatattttctctctcctct-aa 26970819  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
         | |||||||| |||| |||||| ||| | ||||||||||||||||||||| |||| |||||||| ||||||    
T  26970820 aaaaatatattttttgagaatctgctcctaacagcttctcatttgaagctgtttttagataatttttagattctga 26970895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 5801138 - 5800963
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-n 124  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||  ||||||  |||||||||      
T  5801138 aaacaaataatttagtttgtttggatacaactatataaaagagatttttttgttacaaaattagttcaatattttaaattgtatttttcctctcctctaa 5801039  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttct 200  Q
           | |||||||| ||||||| ||||||| | ||||||||||||||||||||| |||||  |||||| ||||    
T  5801038 aaaaaaatatattttttgagaagctactcttaacagcttctcatttgaagctgtttttagatttattttagattct 5800963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 187
Target Start/End: Complemental strand, 44434777 - 44434615
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag--ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    ||||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||| || ||||||||||||| ||||| ||||||||||||||     
T  44434777 aaaacaaataatttagtttgtttggatacaactatataaaagagatatttttgatacaaaactatttcaatcttttaattcataatttctctctcctcta 44434678  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
           |||||||||| | || || ||||||| | ||||||||||||||||||||| |||||    
T  44434677 aaaaaaatctattttttgacaatctcctcttaacagcttctcatttgaagctgtttttagatt 44434615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 24162268 - 24162088
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct--- 123  Q
    ||||||||||| |||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||||  ||  |||||||||||| |       
T  24162268 aaacaaataatctagtttgtttggatgcatctatataaaagagattttttgttacaaaattagttcaatcttttaaacaattgtttctctctcctttaaa 24162169  T
Q  124 --nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
              |||||||||| ||||||||||||||| | |||||||||||||| |||||| ||||||||||||| ||||||    
T  24162168 aaaaaaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagttgtttttagattatttttagattctga 24162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 40261908 - 40262004
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  40261908 aaacaaataatttagtttgtttggatacaactatataaaaagggttttttgttacaaaattagttcaatattttaaaacatattttccctctcctct 40262004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 21696475 - 21696562
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21696475 aaatagtttagtttgtttggatacaactatataaaaggattttttgttacaaaattagttcaatcttttgaatcatattttctctctc 21696562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 47222634 - 47222475
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||        
T  47222634 aaaacaaataatttaatttgtttggatataactatataaaaagagattttttgttacaaaattagttcaatcttttaaaccatattttctctctcc---- 47222539  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttta 194  Q
           |  ||||||| ||||| ||||||||| | |||||||||||||| |||||| ||||||||||||    
T  47222538 ------cttaattttttgagaagatgctcttaacagcttctcatttgaagttgtttttagattattttta 47222475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 14312554 - 14312389
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnn 125  Q
    ||||||||||||||| ||||||| ||||||| |||||||||  | ||||||||||||| || ||||||||||||||||   |||||||||||||||||      
T  14312554 aaaacaaataatttaatttgtttagatacaactatataaaaaggattttttgttacaatataagttcaatcttttaaactctattttctctctcctct-a 14312456  T
Q  126 nnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttt 192  Q
          |||||||||||||||| || |||||| |  |||||||||||||||||||| ||||||||||    
T  14312455 aaaaaatctattttttaagaagatgttcttaacagattctcatttgaagctgtttttagattatttt 14312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 24689338 - 24689428
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctc 115  Q
    ||||||||||| |||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||    
T  24689338 aaacaaataatctagtttgtttggatacaactatataaaagagattttttttgttacaaaattagttcaatcttttaaataatattttctc 24689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 26970509 - 26970413
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||||||||||||||| ||||| |||  | ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  26970509 aaacaaataatttagtttgtttggatacaactatatgaaaatgattttttgttacaaaattagttcaatgttttaaatcatattttatctctcctct 26970413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 24688881 - 24688716
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    ||||||||||||||||||||| | |||||| |||||||||  | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||       
T  24688881 aaacaaataatttagtttgttcgaatacaactatataaaaatgattttttgttaccaaattagttcaatcttttaaaccatattttctctctcctctaaa 24688782  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
         | |||||||| |||| ||| | || | | ||||||||||||||||||||| ||||| |||||    
T  24688781 aaaaat-tattttttgagaaactgtttttcacagcttctcatttgaagctgtttttagatttttttt 24688716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 30121282 - 30121439
Alignment:
Q  40 tagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnnnnntctatt 137  Q
    ||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||    
T  30121282 tagtttgtttgaatacaactatataaaaggaattttttgttacaaaattagttcaatcttttaaattatattttctctctcctctaaaaaaaaatctatt 30121381  T
Q  138 ttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
    || |   ||| ||||| ||| ||||| ||||||||||||||||| | |||||||||||    
T  30121382 ttattttaagttgctcctaacaacttttcatttgaagctgtttttaaattatttttag 30121439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 24689207 - 24689060
Alignment:
Q  39 ttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattt 138  Q
    ||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||||| || |||||||| | |||||| |        |||||||    
T  24689207 ttagtttgttttgatacaactatacaaaagagatttttgttacaaaattagttcaatcttttcaaccatattttatttctcct-tttaaaaaatctattt 24689109  T
Q  139 tttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
     || ||||||||||||||| | ||||||||||||| ||||||| |||||    
T  24689108 cttgagaagctgctcttaacagcttctcatttgaaactgtttttagatt 24689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 4399662 - 4399835
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag--agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct-nnnnn 128  Q
    |||||||||||||||||||||||||| ||||||||||  | |||||| |||||||||||||||||||||| ||  |||||||||||| || |||          
T  4399662 aaataatttagtttgtttggatacaactatataaaagcaattttttttttacaaaattagttcaatctttaaatccatattttctctatcatctaaaaaa 4399761  T
Q  129 nnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
        ||||||||| |||||||||||| || | ||||||||||||| ||||||| | ||| ||||||| ||||||    
T  4399762 aaaactattttttgagaagctgctctcaacagcttctcatttgaatctgtttttatattttttttagattctga 4399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 45447673 - 45447518
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||||||| || |||||||||    |||||| |||||||||||||||||| ||| ||| |||||||||||  ||||||    
T  45447673 aaacaaataatatagtttgtttggatacaactaaataaaagagattttttttttttacaaaattagttcaatttttaaaaccatattttctccttcctct 45447574  T
Q  124 -nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgt 178  Q
             | |||||||||||||| ||||||||||| ||||||||||||||||||    
T  45447573 aaaaaaatatttattttttaagaagttgctcttaatagcttctcatttgaagctgt 45447518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 23640851 - 23640754
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||| |||| |||||||||| | |||||||||| |||||| |||||||||||||||||||||||||   ||||||||||||||||||    
T  23640851 aaaacaaataatttaatttggttggatacaactctataaaagagatttttttttacaaaattagttcaatcttttaatctatattttctctctcctct 23640754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 33858090 - 33857994
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| |||||||||| |||||||||| |||||||| ||||||||||| ||||| ||||    
T  33858090 aaacaaataattttgtttatttggatacaactatataaaagagattttttgttaaaaaattagtttaatcttttgaatcatattttatctctgctct 33857994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 26151243 - 26151097
Alignment:
Q  47 tttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaaga 145  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||||||||||||| | || ||||||||||||||| |        |||||||||| |||    
T  26151243 tttggatacatctatataaaagagattttttgttactaaattagttcaatcttttgactcgtattttctctctcctataaaaaaaatctatttttt-aga 26151145  T
Q  146 agctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    ||||||| |||||||||| ||||||||| || |||| ||||| |||||    
T  26151144 agctgctattaataacttttcatttgaaactctttttagatttttttt 26151097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 21696885 - 21696720
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnn 126  Q
    |||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||| || |||||        
T  21696885 aaacaaataatttactttgtttg-atacaactatataaaagagattttttgttacaaaattagaacaatcttttaaaccatattttccctttcctcaaaa 21696787  T
Q  127 nnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttag 195  Q
         | | |||||| ||||||||||||||||| ||| ||||||||| ||||||| | ||| |||||||    
T  21696786 aaatatat-ttttttgagaagctgctcttaatagcttttcatttgaa-ctgtttttaaattttttttag 21696720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 202
Target Start/End: Original strand, 29854700 - 29854851
Alignment:
Q  52 atacaattatataaaagagtttttt-gttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctg 150  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||| |||| || |||||||||||||||||||        | |||||||| | ||||||    
T  29854700 atacaactatataaaagagatttttcgttacaaaattagttcaatattttgaaccatattttctctctcctctaaaaaatatatattttttgaaaagctg 29854799  T
Q  151 ctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
    ||||||||| ||| | |||| ||| |||||| | ||| ||||||| ||||||    
T  29854800 ctcttaatagcttattatttaaagttgtttttatattttttttagattctga 29854851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 35525904 - 35526073
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttt---tttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||||||| |||| |||| || |||   ||||||||||||||||||||||||||||||   ||||||||| ||  |||    
T  35525904 aaacaaataatctagtttgtttggatacaactatacaaaatgaatttgtttttgttacaaaattagttcaatcttttaaacactattttctcccttttct 35526003  T
Q  124 nnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
            ||| |||||| | ||||||||| ||| |||||||| |||||||||||||| ||||| |||||    
T  35526004 acaaaaaatcttttttttgataagctgctcgtaacaacttctcgtttgaagctgtttttagatttttttt 35526073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 46897939 - 46898015
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaa 103  Q
    ||||||||||| ||||||||||||||| || || ||||||| | |||||||||||||||||||||||||||||||||    
T  46897939 aaacaaataatctagtttgtttggatataactagataaaagggattttttgttacaaaattagttcaatcttttaaa 46898015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 31278229 - 31278351
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcattt 170  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||        ||||||| || |||||||||||| |  | ||||||||||    
T  31278229 ttttttgatacaaaattagttaaattttttaaatcatattttctctcttctct-aagaaaatctatttattgagaagctgctctcaccagcttctcattt 31278327  T
Q  171 gaagctgttttaagattattttta 194  Q
    ||||||||||| ||||| ||||||    
T  31278328 gaagctgtttttagatttttttta 31278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 23809027 - 23808931
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||  |||||||||| |||||||||| | ||||| |||||||||||| ||  || ||||||| |||||||||||| ||||||    
T  23809027 aaacaaataatttagtttagttggatacaactatataaaagggatttttcgttacaaaattaattagattttttaaaccatattttctctttcctct 23808931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 30122176 - 30122252
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaa 102  Q
    ||||||||||||||||||||||||||| | | ||||||||| || |||||||||||||| || ||||||||||||||    
T  30122176 aaaacaaataatttagtttgtttggattctactatataaaaggaattttttgttacaaagttggttcaatcttttaa 30122252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 35527464 - 35527532
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||||| |||||||||  |||||||||| | |||||||||||||||||||||||| ||||    
T  35527464 aaataatttagtttgcttggatacagctatataaaagcgatttttgttacaaaattagttcaatatttt 35527532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 4594521 - 4594469
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  4594521 ttttttgttactaaattagttcaatcttttaaaccatattttctttctcctct 4594469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 11486414 - 11486512
Alignment:
Q  71 ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatt 169  Q
    |||||| |||||||||||||||||| ||||||||  |||||||||||||||||        |||||||||| ||||||| ||| ||| | |||||||||    
T  11486414 tttttttttacaaaattagttcaattttttaaatggtattttctctctcctctaaaaaaaatctatttttttagaagctactcataacagcttctcatt 11486512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 1644370 - 1644309
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    |||||||||| ||||| ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  1644370 tctattttttgagaagatgctcttaacagcttctcatttgaagctgtttttagatttttttt 1644309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 10282574 - 10282501
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||| |||||||||||||||| | ||||||||| |  |||||||| |||||||||||||||| ||||    
T  10282574 aaacaaataatctagtttgtttggatactactatataaaaggtattttttgtaacaaaattagttcaatatttt 10282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 10282769 - 10282700
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt 100  Q
    |||||||||||||||||||||||||  ||  |||||||| || |||||||||||| ||||||||||||||    
T  10282769 aaataatttagtttgtttggatacatctacgtaaaagagattgtttgttacaaaactagttcaatctttt 10282700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 11750043 - 11750112
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||| |||||| ||||||||||| ||||||||| || |||||| ||||||||||| |||||||||||    
T  11750043 aaataatctagtttatttggatacaactatataaaatgatttttttattacaaaattacttcaatctttt 11750112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 23808910 - 23808853
Alignment:
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    |||||| ||||| || |||||| ||||||||||||||||||||||| |||||||||||    
T  23808910 ttttttgagaagttgatcttaacaacttctcatttgaagctgtttttagattattttt 23808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 11485955 - 11485995
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  11485955 aaacaaataatttagtttgtttggatacaactatataaaag 11485995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 35223785 - 35223880
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| | ||||||||||||| || ||||||||| |  |||||||| || ||||||||||||| |||| ||  ||||||||||||||||||    
T  35223785 aaacaaataatattgtttgtttggatataactatataaaatggattttttgtcaccaaattagttcaat-ttttgaactatattttctctctcctct 35223880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 35526289 - 35526221
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttt 100  Q
    ||||| ||||||||||||||||| |  | |||||||||| |||||||||||||||||||| ||| ||||    
T  35526289 aaatattttagtttgtttggatatacctgtataaaagagatttttgttacaaaattagtttaatatttt 35526221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 15639992 - 15640094
Alignment:
Q  72 tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttg 171  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||||||||        |||||||||| ||||| ||||||||  | |||||||||||    
T  15639992 tttttgttataaaattagttcaatttttttatccatattttctctctcctct-aaaaaattctattttttgagaagatgctcttatcagcttctcatttg 15640090  T
Q  172 aagc 175  Q
    ||||    
T  15640091 aagc 15640094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 15641083 - 15641014
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaa 94  Q
    |||| ||||||||||||||||||||| |||  |||||||||  || |||||| |||||||||||||||||    
T  15641083 aaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttttttttacaaaattagttcaa 15641014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 26175528 - 26175462
Alignment:
Q  35 taatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    |||||| ||||||||||||  || ||||||||| || ||||||||||||||||||||| ||||||||    
T  26175528 taatttggtttgtttggatgtaactatataaaatgaattttttgttacaaaattagttaaatctttt 26175462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 1644532 - 1644605
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||| ||||||||||  |||||| |||||||  | | ||||||||||||||||||||||||| ||||    
T  1644532 aaacaaataatctagtttgttttaatacaactatataattgggattttttgttacaaaattagttcaatatttt 1644605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 10282096 - 10281999
Alignment:
Q  83 aaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    ||||||||||||| ||||||| |||||||| |||| |||||        |||||||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  10282096 aaattagttcaatattttaaaacatattttttctcccctcttcaaaaa-tctattttttgagaagctactcttaacagcttctcatttgaagttgtttt 10281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 15639913 - 15639873
Alignment:
Q  141 taagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  15639913 taagaagctactcttaacaacttctcatttgaagctgtttt 15639873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 37986073 - 37986005
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttt 99  Q
    ||||||||||| ||||| |||||||| |||||||||| | ||||||| || ||| ||||||||||||||    
T  37986073 aaataatttagcttgttcggatacaactatataaaagggattttttgataaaaatttagttcaatcttt 37986005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 15640670 - 15640619
Alignment:
Q  72 tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||||||||    
T  15640670 tttttgttataaaattagttcaatttttttatccatattttctctctcctct 15640619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 23895730 - 23895675
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||||||||||||||  |||||| | |||||||||||||| |||||| |||||    
T  23895730 tctattttttaagaagctattcttaacagcttctcatttgaagttgtttttagatt 23895675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 18984764 - 18984714
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaaga-gttttttgttacaaaa 85  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  18984764 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18984714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 18989579 - 18989529
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaaga-gttttttgttacaaaa 85  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  18989579 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 18999393 - 18999343
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaaga-gttttttgttacaaaa 85  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  18999393 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 45883292 - 45883353
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagt--tttttgttacaaaattagtt 91  Q
    |||||||| ||||| ||||||||||| ||||||||||| |  |||||||||||||| |||||    
T  45883292 aaataattcagtttatttggatacaactatataaaagatttatttttgttacaaaactagtt 45883353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 5373032 - 5372983
Alignment:
Q  144 gaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    |||||||||||||| | |||||| ||||||||| |||| |||||||||||    
T  5373032 gaagctgctcttaacagcttctcgtttgaagctatttttagattattttt 5372983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 7630117 - 7630154
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaagag 70  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  7630117 aataattttgtttgtttggatacaactatataaaagag 7630154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 26175427 - 26175378
Alignment:
Q  132 tctattttttaagaagctgctcttaataacttctcatttgaagctgtttt 181  Q
    |||||||||| |||||||||||||||   |||||||||||||||| ||||    
T  26175427 tctattttttgagaagctgctcttaactgcttctcatttgaagctatttt 26175378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 32988690 - 32988739
Alignment:
Q  138 ttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||||||||  |||||||| |||||||||||||| |||||| |||||    
T  32988690 ttttaagaagctattcttaatagcttctcatttgaagttgtttttagatt 32988739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 45689604 - 45689543
Alignment:
Q  39 ttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||| ||||| |||||||||| |  |||| | |||||| ||||||||||||||    
T  45689604 ttagtttgtttgggtacaactatataaaagtgaattttataacaaaactagttcaatctttt 45689543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 581197 - 581265
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||||||| || |||| ||||||||| || | |||||||||||||| |  ||||||||||    
T  581197 aataatttagtttgtttagaaacaactatataaaaggaatattttgttacaaaataatctcaatctttt 581265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 2258794 - 2258698
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2258794 aaacaaataatctagtttgttttgatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 2258698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 33438664 - 33438755
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctc 119  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  33438664 aaacaaataatttagtttgtttgaatacaactatataaaagagatttttgttaaaaaattagttcaatcttttaaaccatattttctctctc 33438755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 21980907 - 21981003
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag-agttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  21980907 aaacaaataatgtagtttgtttggatacaactatataaaaggaattttttgttacaaaattagttcaatcttttaaaaaatattttctctctcctct 21981003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 7204872 - 7204761
Alignment:
Q  47 tttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaaga 145  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||| |||    
T  7204872 tttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaatcatattttttctctcctctaaaaaaaatctattttttgaga 7204773  T
Q  146 agctgctcttaa 157  Q
    ||||||||||||    
T  7204772 agctgctcttaa 7204761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 26209120 - 26209272
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag---ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    |||||||||||||| ||||||| ||||||| |||||| |  ||   ||||||||||||||||||||| ||| ||||||||  |||||||||||||||||     
T  26209120 aaacaaataatttaatttgtttagatacaactatatatataagggattttttgttacaaaattagtttaatattttaaattctattttctctctcctcta 26209219  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctg 177  Q
           |||||||||| ||||||||||||||| | |||||||||||||||||    
T  26209220 aaaaaaatctattttttgagaagctgctcttaacagcttctcatttgaagctg 26209272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 3307024 - 3306916
Alignment:
Q  72 tttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnnntctattttttaagaagctgctcttaataacttctcatttg 171  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||| |||        |||||||||| ||||||||||||||| | |||||||||||    
T  3307024 ttttttttacaaaactagttcaatcttttaattcatattttctctctcttctaaacaaaatctattttttgagaagctgctcttaacagcttctcatttg 3306925  T
Q  172 aagctgttt 180  Q
    ||| |||||    
T  3306924 aagttgttt 3306916  T

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Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 26001342 - 26001246
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||| ||| |||| ||| ||||||| ||||| ||||    
T  26001342 aaacaaataatttagtttatttggatacaactatataaaagagattttttgttaaaaaattagtttaatattttgaattatattttgtctctactct 26001246  T

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Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 10780263 - 10780177
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatatttt 112  Q
    |||| ||||||||||||||||||| |||||| ||||||||| || |||||||||| |||| ||||||||||||||||| ||||||||    
T  10780263 aaaataaataatttagtttgtttgtatacaactatataaaatagattttttgttagaaaactagttcaatcttttaaaccatatttt 10780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 5679162 - 5679063
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag----ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctc 122  Q
    ||||||||||||||||||||||| || | || || |||||||||    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||    
T  5679162 aaaacaaataatttagtttgttt-gacataactacataaaagagatttttttttgttataaaattagttcaatcttttaaaccattttttctctatcctc 5679064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 14094147 - 14094064
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttct 114  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||| || ||| |||| |  ||||||||||    
T  14094147 aaataatttagtttgtttggatacaactatataaaagcgattttttgttataaaattaatttaattttttgatccatattttct 14094064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 7858461 - 7858551
Alignment:
Q  39 ttagtttgtttggatacaat-----tatataaaagagttttttgt-tacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||     ||||||||| | |||||| | ||||||||||||| ||||||||||| |||||||||||| ||||||    
T  7858461 ttagtttgtttggatacaatacaactatataaaataattttttttctacaaaattagtttaatcttttaaaacatattttctctttcctct 7858551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 3307437 - 3307396
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  3307437 aaaacaaataatttagtttgtttggatacaactatataaaag 3307396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 20469416 - 20469376
Alignment:
Q  28 aaacaaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  20469416 aaacaaataatttagtttgtttggatacaactatataaaag 20469376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 24006828 - 24006775
Alignment:
Q  134 tattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    |||||| ||||||||| ||||||| |||||||||||||||| | ||||||||||    
T  24006828 tattttctaagaagctactcttaacaacttctcatttgaagttattttaagatt 24006775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 24006924 - 24006857
Alignment:
Q  35 taatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatctttt 100  Q
    ||||||||||||||| |||||| |||| |||||  || ||| ||||||||||||||||||||| ||||    
T  24006924 taatttagtttgtttcgatacatttatgtaaaacggattttgttgttacaaaattagttcaatttttt 24006857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 3307116 - 3307154
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaa 67  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  3307116 aacaaataatttaatttgtttggatacaactatataaaa 3307154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 4826190 - 4826136
Alignment:
Q  133 ctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagatt 187  Q
    ||||||||| |||||||||| |||| | ||||||||||||| ||||||| |||||    
T  4826190 ctattttttgagaagctgctgttaacatcttctcatttgaaactgtttttagatt 4826136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 9740643 - 9740606
Alignment:
Q  59 tatataaaagag-ttttttgttacaaaattagttcaat 95  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9740643 tatataaaagagattttttgttacaaaattagttcaat 9740606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 3307102 - 3307070
Alignment:
Q  32 aaataatttagtttgtttggatacaattatata 64  Q
    |||||||||||||||||||||||||| ||||||    
T  3307102 aaataatttagtttgtttggatacaactatata 3307070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 8116294 - 8116238
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaatta 88  Q
    |||||||||| | ||||||||||||| | ||||||| || ||||||||| |||||||    
T  8116294 aaataatttaatgtgtttggatacaactgtataaaatagatttttgttataaaatta 8116238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 22533536 - 22533500
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  22533536 aaataatttagtttgtttcgatacaactatataaaag 22533500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 32952451 - 32952487
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaag 68  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  32952451 aaataatttaatttgtttggatacaactatataaaag 32952487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 150280 - 150110
Alignment:
Q  32 aaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnnnn 130  Q
    |||||||||  ||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||           
T  150280 aaataatttgatttgtttggatgcaattatataaaagggattttttataacaaaattagttcaatcttttaaaccatattttctctctcctctaaaaaaa 150181  T
Q  131 ntctattttttaagaagctgctcttaataacttctcatttgaagctgttttaagattatttttaggttctga 202  Q
       || ||||| ||||| | ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  150180 aaata-tttttgagaagatactcttaatagcttctcatttgaagctgtttttagattatttttagattctga 150110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 21987 - 22082
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaagag-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 123  Q
    ||||||||||||||||||||||||||||  | |||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  21987 aaaacaaataatttagtttgtttggata--actatataaaagggattttttgttacaaaattagttcaatcttttaatctatattttctctctcctct 22082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 21785 - 21607
Alignment:
Q  27 aaaacaaataatttagtttgtttggatacaattatataaaa--gagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctn 124  Q
    |||||||||||| |||||||||| ||||||  |||||||||  || |||||||| ||||||||||||||||||||||||  ||||||||| |||||| |     
T  21785 aaaacaaataatctagtttgtttagatacagctatataaaatggatttttttgtgacaaaattagttcaatcttttaaacaatattttctatctcctata 21686  T
Q  125 nnnnnnntctattttttaagaagctgctcttaataacttctcatttgaagctg-ttttaagattatttttaggttctga 202  Q
           |||||||||  ||||| || |||||| | ||||||||||||||  | ||||  |||||||||||| ||||||    
T  21685 aaaaaaatctatttttcgagaagttgttcttaacatcttctcatttgaagaagtttttttgattatttttagattctga 21607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 2029 - 1905
Alignment:
Q  29 aacaaataatttagtttgtttggatacaattatataaaagagttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctctnnnnn 128  Q
    |||||||||| |||||||||| || |||| |||||||| |  ||||||||||||||||||||| ||||||||||||| || ||||||||||||||         
T  2029 aacaaataatctagtttgttttgagacaactatataaagggattttttgttacaaaattagtttaatcttttaaatcgtaatttctctctcctctaaaac 1930  T
Q  129 nnntctattttttaagaagctgctc 153  Q
       |||||||||| |||||||||||    
T  1929 taatctattttttgagaagctgctc 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 3243 - 3399
Alignment:
Q  41 agtttgtttggatacaattatataaaagag-ttttttgttacaaaatt----agttcaatcttttaaatcatattttctctctcctctnnnnnnnntcta 135  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||    ||||||||||||| | ||||||||||||||| ||||        ||||    
T  3243 agtttgtttggatacaactatataaaagtgattttttgttacaaaattaattagttcaatcttttgactcatattttctctcttctct-aaaaaaatcta 3341  T
Q  136 ttttttaagaagctgctcttaataacttctcatttgaagctgttttaagattattttt 193  Q
    ||| || ||||| | ||||||| ||||||||||| |||| |||||| ||||| |||||    
T  3342 tttgtttagaagttactcttaacaacttctcattcgaagttgtttttagatttttttt 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 7182 - 7232
Alignment:
Q  36 aatttagtttgtttggatacaattatataaaaga-gttttttgttacaaaa 85  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  7182 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 29171 - 29103
Alignment:
Q  33 aataatttagtttgtttggatacaattatataaaa-gagttttttgttacaaaattagttcaatctttt 100  Q
    ||||| ||||||||||| ||||||| ||||||||| || | |||||||||||||| |  ||||||||||    
T  29171 aataaattagtttgtttagatacaactatataaaaggaatattttgttacaaaataatctcaatctttt 29103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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