View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9430_low_7 (Length: 261)
Name: NF9430_low_7
Description: NF9430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9430_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 64 - 253
Target Start/End: Original strand, 10467431 - 10467613
Alignment:
| Q |
64 |
aatgaattgcctcccattcaatgaccgaccactccaaaataatgtttcctcttcattccccattactctattaacacatcctagcctgaataccaatttt |
163 |
Q |
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| T |
10467431 |
aatgaattgcctcccattcaatgactgaccactccaaaataatgtttcctc-------cccattactctattaacacatcctagcctgaataccaatttt |
10467523 |
T |
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| Q |
164 |
ggtttgttaattaaaatgcataaccatatgcttgattactttcagataatagtggtttatacaaaaacacacatcacaatttagtattat |
253 |
Q |
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| T |
10467524 |
ggtttgttaattaaaatgcataaccatatgcttgattactttcagataatagtggtttatacaaaaacacacatcacaatttagcattat |
10467613 |
T |
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