View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9431_low_23 (Length: 201)
Name: NF9431_low_23
Description: NF9431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9431_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 10576124 - 10576295
Alignment:
| Q |
17 |
catttattcacaaggatagaaaaacattagcatctcctggtggccaatgaattgcatatgcaccattatagtgggacagaacatagactatttctcaaat |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10576124 |
catttattcacaaggatagaaaaacattagcatctcctggtggccaatgaattgcatatacaccattatagtgggacagaacatagactatttctcaaat |
10576223 |
T |
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| Q |
117 |
ttgactgcattgtcagctacgaacgtattcccttgcttcagttcaaagacttccacttctacagcctatgct |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10576224 |
ttgactgcattgtcagctacgaacgtattcccttgcttcagttcaaagacttccacttctacagcctctgct |
10576295 |
T |
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