View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9431_low_5 (Length: 382)
Name: NF9431_low_5
Description: NF9431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9431_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 11 - 368
Target Start/End: Complemental strand, 46985893 - 46985536
Alignment:
| Q |
11 |
cacagaaagtaaactgaaagaccataggtatattagaataaagcagcaatagcaaacaacatcattattcgacctcatttgggaccacatgtaacggaaa |
110 |
Q |
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| T |
46985893 |
cacagaaagtaaactgaaagaccataggtatattagaataaagcagcaatagcaaacaacatcattattcgacctcatttgggaccacatgtaacggaaa |
46985794 |
T |
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| Q |
111 |
ataatgccaatttgagggcaggctgtatcaggcacagtatgctcattaacagagtgtatggaaaatgtagactccagaggttctgcactcatattctgat |
210 |
Q |
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| T |
46985793 |
ataatgccaatttgagggcaggctgtatcaggcacagtatgctcattaacagagtgtatggaaaatgtagactccagaggttctgcactcgtattctgat |
46985694 |
T |
|
| Q |
211 |
tctcaatctcatagtactcctcatcgtctgatgaatcttcagctgactttaattctttacgttctatcttcagatagttcattagattgttaactgccat |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46985693 |
tctcaatctcatagtactcctcatcgtctgatgaatcttcagctgactttaattctttacgttctatcttcagatagttcattagattgttaactgccat |
46985594 |
T |
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| Q |
311 |
atttccaagagactgcacctgagatactccattccctatgaaatgtacagcagaaact |
368 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46985593 |
atttccaagagactgcacctgagatactccattccctatgaaatgtacagcagaaact |
46985536 |
T |
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