View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9431_low_9 (Length: 321)
Name: NF9431_low_9
Description: NF9431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9431_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 306
Target Start/End: Original strand, 52086836 - 52087131
Alignment:
| Q |
11 |
tgttggagccatattcttaggctctagtgccaataatactgaaaatggcgacgcatctgttcaacataagagatgggtggatgatgcttttgctgcattg |
110 |
Q |
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| T |
52086836 |
tgttggagccatattcttaggctctagtgccaataatactggaaatggcgacgcatctgttcaacataagagatgggtggatgatgcttttgctgctttg |
52086935 |
T |
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| Q |
111 |
taaattagtgctgtatgattttagttgattatccgtttatttgtatttatcaaagtaaccttttcttaataatattgttatgtttgggcatagtgtatat |
210 |
Q |
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| T |
52086936 |
taaattagtgctgtatgattttagttgattatccgtttatttgtatttatcaaagtaaccttttcttaataatattgttatgtttgggcatagtgtatat |
52087035 |
T |
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| Q |
211 |
atgtattttactgggaaattggaatagccggtgattttaaagaatttgttttggttgaagttttcttataaaaatgaaaaatggttacacacttat |
306 |
Q |
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| T |
52087036 |
atgtattttactgggaaattggaatagccggtgattttaaagaatttgttttggttgaagtttccttataaaaatgaaaaatggttacacacttat |
52087131 |
T |
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