View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9432_low_9 (Length: 302)
Name: NF9432_low_9
Description: NF9432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9432_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 42062045 - 42062318
Alignment:
| Q |
18 |
aaagcaataatgcgaattttggtcgaccaaaaaatatataatatttaaatggcaaacaaagacaagaactttgtacatatatgatgatatttgtattatg |
117 |
Q |
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| T |
42062045 |
aaagcaataatgcgaattttggtcgaccaaaaaatatataatatttaaatggcaaacaaagacaagaactttgtacatatatgatgatatttgtattatg |
42062144 |
T |
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| Q |
118 |
tgcccccttcaaaacagaatttccaattaagtcaataattatatgataaagaaatgagaacaccttgtaccaaata--atatatatattgagatcaccat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
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| T |
42062145 |
tgcccccttcaaaacagaatttccaattaagtcaataattatatgataaagaaatgagaacaccttgtaccaaataatatatatatattgagaacaccat |
42062244 |
T |
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| Q |
216 |
gccaaacagaaatttggaagagtgctattataaatgattaccatctcactgcattttatccttgaacattagta |
289 |
Q |
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| T |
42062245 |
gccaaacagaaatttggaagagtgctattataaatgattaccatctcactgcattttatctttgaacattagta |
42062318 |
T |
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