View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9435_7 (Length: 367)
Name: NF9435_7
Description: NF9435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9435_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 11 - 367
Target Start/End: Complemental strand, 46985893 - 46985537
Alignment:
| Q |
11 |
cacagaaagtaaactgaaagaccataggtatattagaataaagcagcaatagcaaacaacatcattattcgacctcatttgggaccacatgtaacggaaa |
110 |
Q |
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| T |
46985893 |
cacagaaagtaaactgaaagaccataggtatattagaataaagcagcaatagcaaacaacatcattattcgacctcatttgggaccacatgtaacggaaa |
46985794 |
T |
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| Q |
111 |
ataatgccaatttgagggcaggctgtatcaggcacagtatgctcattaacagagtgtatggaaaatgtagactccagaggctctgcactcatattctgat |
210 |
Q |
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| T |
46985793 |
ataatgccaatttgagggcaggctgtatcaggcacagtatgctcattaacagagtgtatggaaaatgtagactccagaggttctgcactcgtattctgat |
46985694 |
T |
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| Q |
211 |
tctcaatctcatagtactcctcatcgtctgatgaatcttcagctgactttaattctttacgttctatcttcagatagttcattagattgttaactgccat |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46985693 |
tctcaatctcatagtactcctcatcgtctgatgaatcttcagctgactttaattctttacgttctatcttcagatagttcattagattgttaactgccat |
46985594 |
T |
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| Q |
311 |
atttccaagagactgcacctgagatactccattccctatgaaatgtacagcagaaac |
367 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46985593 |
atttccaagagactgcacctgagatactccattccctatgaaatgtacagcagaaac |
46985537 |
T |
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