View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9436_low_12 (Length: 249)
Name: NF9436_low_12
Description: NF9436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9436_low_12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 249
Target Start/End: Complemental strand, 37029222 - 37028980
Alignment:
| Q |
7 |
ttggtgttcatctgcagcaccaataaataacttttgctttcttaggatataatttaaagaatttatcgaaataaactaaaaataacttataaatatgtgc |
106 |
Q |
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| T |
37029222 |
ttggtgttcatctgcagcaccaataaataacttttgctttcttaggatataatttaaagaatttatcgaaataaactaaaaataacttataaatatgtgc |
37029123 |
T |
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| Q |
107 |
aaagacttcctgagttttctcaaacactctaaaagtggtttacgtccgttgataaactcaaaaataaaaagttcataaattaatacaatcacatcctttg |
206 |
Q |
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| T |
37029122 |
aaagactttctgagttttctcaaacactctaaaagtggtttacgtccgttgataaactcaaaaataaaaagttcataaattaatacaatcacatcctttg |
37029023 |
T |
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| Q |
207 |
ttaggcataggttctgtccattcctaatactgatagcacaaaa |
249 |
Q |
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| T |
37029022 |
ttaggcataggttctgtccattcctaatactgatagcacaaaa |
37028980 |
T |
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