View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9439_low_22 (Length: 286)
Name: NF9439_low_22
Description: NF9439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9439_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 276
Target Start/End: Original strand, 32267379 - 32267637
Alignment:
| Q |
18 |
aattacaattgcaatcgtatcgaccctgtttgatagtattttcttgcaatatcaaggtttgcaagataaccgcaacaattgcaattgcaatataggttga |
117 |
Q |
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| T |
32267379 |
aattacaattgcaatcgtatcgaccctgtttgatagtattttcttgcaatatcaaggtttgcaagataaccgcaacaattgcaattgcaatataggttga |
32267478 |
T |
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| Q |
118 |
atcaactgcatttgactacaatcttaaataatgtgaccatgacaatcaattaaatttacaacgttttttcatcaactatttttgcaggttattaataatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32267479 |
atcaactgcatttgactacaatcttaaataatgtgaccatgacaatcaattaaatttacaacgttttttcatcaactatttttgcaggttattaataatg |
32267578 |
T |
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| Q |
218 |
aagtatacagccagatggttctatatgtggtggtgatgaccggcatatgcatacctttg |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32267579 |
aagtatacagccagatggttctatatgtggtggtgatgaccgggatatgcatacctttg |
32267637 |
T |
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