View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9440_low_1 (Length: 213)
Name: NF9440_low_1
Description: NF9440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9440_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 39767839 - 39768051
Alignment:
| Q |
1 |
cttcatcgtgaaacagcacttcgtctccacttttcagtttaaaccttcaatgctctgatctggcaaattgttatccgcaactgtcaaataaaaatctaca |
100 |
Q |
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| T |
39767839 |
cttcatcgtgaaacagcacttcgtctccacttttcagtttaaaccttcaatgctctgatctggcaaattgttatccgcaactgtcaaataaaaatctaca |
39767938 |
T |
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| Q |
101 |
tatcgttgttagaagggtggtgccttttgagcccttgaatataattaattgatggtgtataatgtttatatgacgtgggtacacactacactaggataag |
200 |
Q |
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| T |
39767939 |
tatcgttgttagaagggtggtgccttttgagcccttgaatataattaattgatggtgtataatgtttatatgacgtgggtacacactacactaggataag |
39768038 |
T |
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| Q |
201 |
gtggcaaaattgt |
213 |
Q |
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||||||||||||| |
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| T |
39768039 |
gtggcaaaattgt |
39768051 |
T |
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