View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9441_low_9 (Length: 326)
Name: NF9441_low_9
Description: NF9441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9441_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 68 - 319
Target Start/End: Original strand, 25249416 - 25249667
Alignment:
| Q |
68 |
gataaatagcattgcgctttgtattttgacatacaataaatttcagcatacttataaaagggaaataatgtaacaaaacaacagagtttcattgtacgtc |
167 |
Q |
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| T |
25249416 |
gatacatagcattgccctttgtattttgacatacaataaatttcagcatacttataaaagggaaatgatgtaacaaaacaacagagtttcattgtatgtc |
25249515 |
T |
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| Q |
168 |
agtatcaaacttgtttacaccaataatgcataatgaacattgaaatcacaatttatctggtagataaaattagatttcattgaaagcctttgcttgcatc |
267 |
Q |
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| T |
25249516 |
agtatcaaacttgtttacaccaataatgcataatgaacattgaaatcacaatttatctggtagataaaattagatttcattgaaatcctttgcttgcatc |
25249615 |
T |
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| Q |
268 |
aattcacagatgactgcactaacccaaaattaccaatcctactcctatgctt |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25249616 |
aattcacagatgactgcactaacccaaaattaccaatcctactcctatgctt |
25249667 |
T |
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