View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9444_low_102 (Length: 251)
Name: NF9444_low_102
Description: NF9444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9444_low_102 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 34331415 - 34331627
Alignment:
| Q |
17 |
cagagagttacttaattgtgaagctcaatgccatgacttatgccatttagatagatcatagagccattttatttgcacaaacatatatgtaatgtagtat |
116 |
Q |
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| T |
34331415 |
cagagagttacttaattgtgaagctcaatgccatgacttatgccatttagatagatcatagagccattttatttgcacaaacatatatgtaatgtagtat |
34331514 |
T |
|
| Q |
117 |
tctatgttgatttatggggcagagattataagctcttctaatttttgacacctgttattgctattattactcaatgtcatatcatatgctattatattta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34331515 |
tctatgttgatttatggggcagagattataagctcttctaatttttgacacctgttattgctattattactcaatgtcatatcatatgctattatattta |
34331614 |
T |
|
| Q |
217 |
tacaagttatgca |
229 |
Q |
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||||||||||||| |
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| T |
34331615 |
tacaagttatgca |
34331627 |
T |
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