View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9444_low_9 (Length: 597)

Name: NF9444_low_9
Description: NF9444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9444_low_9
NF9444_low_9
[»] chr2 (46 HSPs)
chr2 (31-497)||(42447092-42447553)
chr2 (494-564)||(17434728-17434797)
chr2 (521-585)||(7737162-7737226)
chr2 (522-585)||(2818764-2818827)
chr2 (527-585)||(10552984-10553042)
chr2 (521-585)||(16705830-16705894)
chr2 (522-585)||(9933580-9933642)
chr2 (522-585)||(27920670-27920733)
chr2 (529-585)||(1923990-1924046)
chr2 (522-578)||(42713794-42713850)
chr2 (522-585)||(24101842-24101905)
chr2 (522-585)||(43476044-43476107)
chr2 (522-585)||(45408723-45408786)
chr2 (494-532)||(9281427-9281465)
chr2 (522-564)||(40362580-40362622)
chr2 (526-574)||(9850779-9850827)
chr2 (542-585)||(2818676-2818719)
chr2 (494-537)||(3116929-3116972)
chr2 (522-585)||(3116974-3117037)
chr2 (522-585)||(6605833-6605895)
chr2 (494-537)||(12850617-12850660)
chr2 (494-537)||(22269775-22269818)
chr2 (494-537)||(24101907-24101950)
chr2 (494-537)||(34490509-34490552)
chr2 (494-537)||(45408678-45408721)
chr2 (522-585)||(29229371-29229436)
chr2 (522-585)||(29342671-29342736)
chr2 (494-532)||(34455938-34455976)
chr2 (522-583)||(9281359-9281420)
chr2 (524-585)||(34490556-34490617)
chr2 (542-585)||(3116886-3116929)
chr2 (522-585)||(12850552-12850615)
chr2 (542-585)||(16705743-16705786)
chr2 (494-537)||(16705786-16705829)
chr2 (542-585)||(34490466-34490509)
chr2 (538-585)||(43858548-43858595)
chr2 (503-537)||(1924055-1924089)
chr2 (494-532)||(6605788-6605826)
chr2 (503-537)||(23835939-23835973)
chr2 (500-537)||(27920631-27920668)
chr2 (537-581)||(17500020-17500064)
chr2 (494-537)||(20892937-20892981)
chr2 (542-578)||(20893003-20893039)
chr2 (542-582)||(23835889-23835929)
chr2 (542-582)||(24101950-24101990)
chr2 (496-532)||(43476001-43476037)
[»] scaffold0006 (1 HSPs)
scaffold0006 (494-585)||(72298-72389)
[»] chr7 (47 HSPs)
chr7 (494-585)||(35665643-35665734)
chr7 (522-585)||(20184248-20184311)
chr7 (522-585)||(24836118-24836181)
chr7 (522-585)||(30259076-30259139)
chr7 (522-583)||(12142291-12142352)
chr7 (522-590)||(30594791-30594859)
chr7 (522-585)||(3953052-3953115)
chr7 (522-585)||(31231624-31231687)
chr7 (522-585)||(34052377-34052440)
chr7 (529-585)||(35339288-35339344)
chr7 (522-585)||(45997518-45997581)
chr7 (494-532)||(37093821-37093859)
chr7 (522-568)||(40358213-40358259)
chr7 (522-567)||(31521553-31521598)
chr7 (522-582)||(10936483-10936543)
chr7 (522-585)||(9285724-9285787)
chr7 (522-585)||(9289791-9289854)
chr7 (494-537)||(25742506-25742549)
chr7 (494-537)||(30259141-30259184)
chr7 (494-537)||(30594746-30594789)
chr7 (494-537)||(35339353-35339396)
chr7 (494-537)||(38883274-38883317)
chr7 (494-532)||(24836073-24836111)
chr7 (494-532)||(34052332-34052370)
chr7 (529-585)||(29277942-29277998)
chr7 (494-537)||(3953117-3953160)
chr7 (542-585)||(10936588-10936631)
chr7 (542-585)||(20184357-20184400)
chr7 (498-537)||(24123830-24123869)
chr7 (542-585)||(31231734-31231777)
chr7 (522-565)||(37093866-37093909)
chr7 (542-585)||(38528530-38528573)
chr7 (522-585)||(39143722-39143785)
chr7 (494-537)||(45997583-45997626)
chr7 (494-532)||(9285794-9285832)
chr7 (494-532)||(9289861-9289899)
chr7 (494-532)||(10936550-10936588)
chr7 (543-585)||(33721837-33721879)
chr7 (503-537)||(39617916-39617950)
chr7 (494-528)||(48103421-48103455)
chr7 (539-581)||(48103480-48103522)
chr7 (503-532)||(20184318-20184347)
chr7 (541-586)||(22723235-22723280)
chr7 (529-562)||(39617874-39617907)
chr7 (494-537)||(12142245-12142289)
chr7 (542-582)||(39617960-39618000)
chr7 (500-532)||(40358174-40358206)
[»] chr8 (34 HSPs)
chr8 (522-585)||(15882299-15882362)
chr8 (522-585)||(17426638-17426701)
chr8 (522-585)||(24741833-24741896)
chr8 (522-585)||(40891111-40891174)
chr8 (494-543)||(4035794-4035843)
chr8 (522-583)||(23940816-23940877)
chr8 (526-582)||(14834685-14834741)
chr8 (523-582)||(4261989-4262048)
chr8 (522-585)||(38520116-38520179)
chr8 (522-585)||(38629572-38629635)
chr8 (529-582)||(35467275-35467328)
chr8 (526-585)||(37114340-37114399)
chr8 (494-532)||(38520071-38520109)
chr8 (496-537)||(8210378-8210419)
chr8 (536-585)||(24211288-24211337)
chr8 (541-585)||(8210333-8210377)
chr8 (522-585)||(29780969-29781032)
chr8 (494-537)||(29781034-29781077)
chr8 (511-553)||(8920150-8920192)
chr8 (494-532)||(40891066-40891104)
chr8 (494-537)||(4262051-4262094)
chr8 (522-585)||(12234565-12234628)
chr8 (497-532)||(17426708-17426743)
chr8 (542-585)||(17426748-17426791)
chr8 (494-537)||(37114291-37114334)
chr8 (522-564)||(11828627-11828669)
chr8 (494-532)||(38629527-38629565)
chr8 (500-537)||(33100720-33100757)
chr8 (503-532)||(38405201-38405230)
chr8 (522-582)||(8210421-8210481)
chr8 (493-537)||(24211353-24211397)
chr8 (518-582)||(33940702-33940766)
chr8 (526-582)||(38405241-38405297)
chr8 (542-582)||(38629487-38629527)
[»] chr4 (53 HSPs)
chr4 (522-585)||(24915804-24915867)
chr4 (522-585)||(24969551-24969614)
chr4 (524-585)||(32318730-32318791)
chr4 (522-585)||(1299010-1299073)
chr4 (518-585)||(43486210-43486277)
chr4 (522-585)||(13204475-13204538)
chr4 (522-585)||(21048715-21048778)
chr4 (522-585)||(23928578-23928640)
chr4 (522-585)||(42274502-42274565)
chr4 (529-583)||(2272471-2272525)
chr4 (522-585)||(530679-530742)
chr4 (494-537)||(18417710-18417753)
chr4 (522-585)||(18417755-18417818)
chr4 (494-532)||(32318800-32318838)
chr4 (529-582)||(9355566-9355619)
chr4 (536-585)||(36030949-36030998)
chr4 (407-471)||(6966708-6966772)
chr4 (522-582)||(27434708-27434768)
chr4 (522-582)||(55049413-55049473)
chr4 (494-537)||(530744-530787)
chr4 (494-537)||(1298965-1299008)
chr4 (494-537)||(4552838-4552881)
chr4 (522-585)||(4552883-4552946)
chr4 (522-585)||(4688257-4688320)
chr4 (522-581)||(20435154-20435213)
chr4 (542-585)||(20435258-20435301)
chr4 (522-585)||(55107622-55107685)
chr4 (529-582)||(35360781-35360834)
chr4 (493-537)||(28809922-28809966)
chr4 (494-537)||(42274567-42274611)
chr4 (542-585)||(530787-530830)
chr4 (61-148)||(6967092-6967173)
chr4 (494-537)||(13204430-13204473)
chr4 (542-585)||(18417667-18417710)
chr4 (494-537)||(20435215-20435258)
chr4 (494-537)||(23928642-23928685)
chr4 (494-537)||(35360729-35360772)
chr4 (542-585)||(37525061-37525104)
chr4 (542-585)||(47465102-47465145)
chr4 (494-537)||(52587390-52587433)
chr4 (542-585)||(52824249-52824292)
chr4 (542-585)||(55107534-55107577)
chr4 (494-532)||(4895025-4895063)
chr4 (494-532)||(24294520-24294558)
chr4 (522-564)||(24294565-24294607)
chr4 (494-532)||(27434663-27434701)
chr4 (494-532)||(55107577-55107615)
chr4 (503-532)||(4688327-4688356)
chr4 (503-532)||(24915874-24915903)
chr4 (503-532)||(24969621-24969650)
chr4 (542-582)||(23928685-23928725)
chr4 (522-585)||(28809856-28809920)
chr4 (542-582)||(32318838-32318878)
[»] chr1 (61 HSPs)
chr1 (522-585)||(9978061-9978124)
chr1 (522-585)||(27240934-27240997)
chr1 (529-585)||(362462-362518)
chr1 (522-585)||(19954921-19954984)
chr1 (522-585)||(40647216-40647279)
chr1 (522-582)||(15324725-15324785)
chr1 (522-581)||(957687-957746)
chr1 (523-585)||(50856331-50856393)
chr1 (528-581)||(2125084-2125137)
chr1 (529-582)||(42561308-42561361)
chr1 (529-585)||(5189574-5189630)
chr1 (529-585)||(47940580-47940636)
chr1 (522-585)||(14387025-14387088)
chr1 (494-532)||(2854612-2854650)
chr1 (494-532)||(23698582-23698620)
chr1 (494-532)||(27241004-27241042)
chr1 (523-585)||(27926261-27926323)
chr1 (494-532)||(48954294-48954332)
chr1 (523-585)||(51789607-51789669)
chr1 (522-566)||(6079482-6079526)
chr1 (494-558)||(28447927-28447991)
chr1 (522-585)||(1387876-1387939)
chr1 (522-585)||(2854542-2854605)
chr1 (494-537)||(3607804-3607847)
chr1 (494-537)||(5189522-5189565)
chr1 (494-537)||(6079437-6079480)
chr1 (522-585)||(23698512-23698575)
chr1 (529-580)||(27670248-27670299)
chr1 (494-537)||(42561370-42561413)
chr1 (522-585)||(48954224-48954287)
chr1 (494-537)||(50627184-50627227)
chr1 (494-532)||(19954991-19955029)
chr1 (523-581)||(27928312-27928370)
chr1 (522-585)||(3607739-3607802)
chr1 (542-585)||(5189479-5189522)
chr1 (542-585)||(9978170-9978213)
chr1 (494-537)||(14387090-14387133)
chr1 (494-537)||(19797056-19797099)
chr1 (542-585)||(19797099-19797142)
chr1 (534-585)||(21930488-21930539)
chr1 (498-537)||(27926325-27926364)
chr1 (494-537)||(28244011-28244054)
chr1 (522-585)||(36880609-36880672)
chr1 (494-537)||(48645089-48645132)
chr1 (526-585)||(49284304-49284363)
chr1 (542-585)||(49285093-49285136)
chr1 (542-585)||(50627249-50627292)
chr1 (494-532)||(1387831-1387869)
chr1 (494-532)||(2125150-2125188)
chr1 (503-537)||(4299467-4299501)
chr1 (494-532)||(9895306-9895344)
chr1 (503-537)||(15324689-15324723)
chr1 (503-537)||(26208487-26208521)
chr1 (503-537)||(27928372-27928406)
chr1 (503-537)||(47940645-47940679)
chr1 (522-568)||(51276722-51276768)
chr1 (503-532)||(9978131-9978160)
chr1 (529-578)||(26208530-26208579)
chr1 (503-532)||(50162618-50162647)
chr1 (542-582)||(27926370-27926410)
chr1 (537-585)||(29598450-29598498)
[»] scaffold0122 (2 HSPs)
scaffold0122 (522-585)||(45932-45995)
scaffold0122 (494-537)||(45887-45930)
[»] chr6 (33 HSPs)
chr6 (522-585)||(885483-885546)
chr6 (522-585)||(21379951-21380014)
chr6 (522-594)||(4238952-4239024)
chr6 (522-585)||(3369083-3369146)
chr6 (522-585)||(14393662-14393725)
chr6 (522-585)||(15546730-15546793)
chr6 (529-585)||(8091167-8091223)
chr6 (494-537)||(885438-885481)
chr6 (522-585)||(4890490-4890553)
chr6 (522-585)||(7808707-7808770)
chr6 (494-537)||(8091115-8091158)
chr6 (494-537)||(13172648-13172691)
chr6 (494-537)||(15546685-15546728)
chr6 (522-568)||(6433755-6433801)
chr6 (494-532)||(7808662-7808700)
chr6 (522-564)||(13439794-13439836)
chr6 (544-585)||(17367074-17367115)
chr6 (542-582)||(14393574-14393614)
chr6 (529-585)||(18998127-18998182)
chr6 (542-585)||(4890599-4890642)
chr6 (494-537)||(11687218-11687261)
chr6 (494-537)||(20501759-20501802)
chr6 (542-585)||(21380059-21380102)
chr6 (542-585)||(29609011-29609054)
chr6 (494-532)||(3369038-3369076)
chr6 (498-532)||(4238911-4238945)
chr6 (503-537)||(13439758-13439792)
chr6 (522-564)||(31764356-31764398)
chr6 (503-532)||(4890560-4890589)
chr6 (504-537)||(14393627-14393660)
chr6 (529-582)||(29609106-29609159)
chr6 (542-582)||(3368998-3369038)
chr6 (500-532)||(31764405-31764437)
[»] chr5 (33 HSPs)
chr5 (522-585)||(13754301-13754364)
chr5 (522-585)||(33629355-33629418)
chr5 (494-567)||(2268675-2268748)
chr5 (522-582)||(21259743-21259803)
chr5 (522-585)||(20476529-20476592)
chr5 (529-585)||(12808016-12808072)
chr5 (522-585)||(12744924-12744987)
chr5 (522-585)||(21591223-21591286)
chr5 (522-585)||(21595340-21595403)
chr5 (496-537)||(33629420-33629461)
chr5 (529-585)||(32623225-32623281)
chr5 (494-537)||(1138612-1138655)
chr5 (522-585)||(1138657-1138720)
chr5 (494-537)||(1456097-1456140)
chr5 (494-537)||(43539160-43539203)
chr5 (529-583)||(4266087-4266141)
chr5 (494-532)||(12744879-12744917)
chr5 (494-532)||(21259810-21259848)
chr5 (494-532)||(21261996-21262034)
chr5 (529-581)||(10132359-10132411)
chr5 (542-585)||(1138569-1138612)
chr5 (542-585)||(2255580-2255623)
chr5 (494-537)||(15855896-15855939)
chr5 (494-537)||(16473008-16473051)
chr5 (542-585)||(24397364-24397407)
chr5 (494-537)||(35420687-35420730)
chr5 (522-585)||(37552318-37552381)
chr5 (510-553)||(42522879-42522922)
chr5 (526-585)||(43539209-43539268)
chr5 (529-583)||(2529086-2529140)
chr5 (503-537)||(24397320-24397354)
chr5 (522-566)||(21262041-21262085)
chr5 (542-582)||(35806948-35806988)
[»] chr3 (73 HSPs)
chr3 (522-585)||(10254667-10254730)
chr3 (522-585)||(45487897-45487960)
chr3 (522-585)||(55340303-55340366)
chr3 (529-585)||(8831846-8831902)
chr3 (529-585)||(21969167-21969223)
chr3 (529-585)||(21991603-21991659)
chr3 (522-582)||(25446348-25446408)
chr3 (522-585)||(22101263-22101326)
chr3 (522-585)||(22176207-22176270)
chr3 (522-585)||(35368831-35368894)
chr3 (522-585)||(50099532-50099595)
chr3 (524-585)||(32237404-32237465)
chr3 (529-585)||(3970501-3970557)
chr3 (529-585)||(4072283-4072339)
chr3 (522-582)||(12838175-12838235)
chr3 (529-585)||(13078173-13078229)
chr3 (523-582)||(404144-404203)
chr3 (526-585)||(49984033-49984092)
chr3 (494-532)||(26906507-26906545)
chr3 (494-532)||(36278836-36278874)
chr3 (503-585)||(10117578-10117672)
chr3 (529-582)||(25488354-25488407)
chr3 (529-582)||(25561116-25561169)
chr3 (529-578)||(43639098-43639147)
chr3 (494-537)||(3970566-3970609)
chr3 (494-537)||(10441333-10441376)
chr3 (494-537)||(12838130-12838173)
chr3 (494-537)||(13078238-13078281)
chr3 (494-537)||(25488416-25488459)
chr3 (494-537)||(25561064-25561107)
chr3 (522-585)||(26906552-26906615)
chr3 (494-537)||(32237469-32237512)
chr3 (542-585)||(35368559-35368602)
chr3 (522-585)||(36278766-36278829)
chr3 (494-537)||(36329255-36329298)
chr3 (494-537)||(36822835-36822878)
chr3 (542-585)||(39850463-39850506)
chr3 (542-585)||(43639200-43639243)
chr3 (494-532)||(21969237-21969275)
chr3 (494-532)||(21991673-21991711)
chr3 (494-532)||(43150533-43150571)
chr3 (494-532)||(44611461-44611499)
chr3 (522-583)||(12789704-12789765)
chr3 (522-563)||(43150578-43150619)
chr3 (529-585)||(1476561-1476617)
chr3 (494-537)||(39850419-39850463)
chr3 (494-537)||(43639156-43639200)
chr3 (521-585)||(45712913-45712977)
chr3 (494-537)||(10017167-10017210)
chr3 (542-585)||(21969275-21969318)
chr3 (542-585)||(21991711-21991754)
chr3 (542-581)||(36329298-36329337)
chr3 (494-537)||(36657508-36657551)
chr3 (542-585)||(36822878-36822921)
chr3 (522-581)||(44920661-44920719)
chr3 (542-585)||(45487809-45487852)
chr3 (494-537)||(45712978-45713021)
chr3 (526-581)||(46222042-46222097)
chr3 (503-537)||(4072348-4072382)
chr3 (494-532)||(12789659-12789697)
chr3 (503-537)||(25446312-25446346)
chr3 (503-537)||(35368795-35368829)
chr3 (494-532)||(44920726-44920764)
chr3 (498-532)||(50099491-50099525)
chr3 (503-537)||(55340368-55340402)
chr3 (503-532)||(404107-404136)
chr3 (503-532)||(13724067-13724096)
chr3 (524-585)||(36822770-36822831)
chr3 (529-582)||(44611394-44611447)
chr3 (542-582)||(10441271-10441311)
chr3 (529-585)||(13723998-13724053)
chr3 (494-537)||(22101217-22101261)
chr3 (547-595)||(46664299-46664347)
[»] scaffold0137 (2 HSPs)
scaffold0137 (524-585)||(10215-10276)
scaffold0137 (494-537)||(10169-10211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (526-586)||(138286-138346)
[»] scaffold0391 (1 HSPs)
scaffold0391 (494-558)||(3639-3703)
[»] scaffold0188 (3 HSPs)
scaffold0188 (522-585)||(7184-7247)
scaffold0188 (494-537)||(7139-7182)
scaffold0188 (542-585)||(7096-7139)
[»] scaffold0163 (1 HSPs)
scaffold0163 (522-585)||(1949-2012)
[»] scaffold0086 (2 HSPs)
scaffold0086 (522-581)||(48224-48283)
scaffold0086 (494-537)||(48179-48222)
[»] scaffold0595 (2 HSPs)
scaffold0595 (522-568)||(5803-5849)
scaffold0595 (542-584)||(5712-5754)
[»] scaffold0107 (2 HSPs)
scaffold0107 (494-532)||(51116-51154)
scaffold0107 (529-585)||(51168-51224)
[»] scaffold0653 (2 HSPs)
scaffold0653 (522-585)||(3403-3466)
scaffold0653 (494-532)||(3473-3511)
[»] scaffold0118 (1 HSPs)
scaffold0118 (534-585)||(14552-14603)
[»] scaffold0013 (1 HSPs)
scaffold0013 (522-558)||(94270-94306)


Alignment Details
Target: chr2 (Bit Score: 415; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 31 - 497
Target Start/End: Complemental strand, 42447553 - 42447092
Alignment:
Q  31 aatatataaaaagaaaaatgataaattcacaaagtgtgggaaaagggaaatgagttctattatattctatttgagtttcatacaccattctttcaatgtt 130  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  42447553 aatatataaaaagaaaaatgataaattcacaaagtgtgtgaaaaggaaaatgagttctatt-----ctatttgagtttcatacaccattctttcaatgtt 42447459  T
Q  131 tccgataggagtgttatcttggcaaagatgtttttcagtagtcgtagttttgtcgaacggttaatttatagagaaaacatacactaattactagtacatt 230  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42447458 tccggtaggagtgttatcttggcaaagatgtttttcagtagtcgtagttttgtcgaacggttaatttatagagaaaacatacactaattactagtacatt 42447359  T
Q  231 gcatgcacaccatgtgtcttctaacttccaagaaccgcttttgcaagtttcttccttctgagtttgaatatttcgcgcttcaaatgaataattgttgatc 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42447358 gcatgcacaccatgtgtcttctaacttccaagaaccgcttttgcaagtttcttccttctgagtttgaagatttcgcgcttcaaatgaataattgttgatc 42447259  T
Q  331 ttgaaacttcatgaacattcttcagatgatagagcattttgaattcttagagcaacactagtagttatatatgttgtcttgatttctttgtcacatcttt 430  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  42447258 ttgaaacttcttgaacattcttcagatgatagagcattttgaattcttagagcaacactagtagttatatatgctgtcttgacttctttgtcacatcttt 42447159  T
Q  431 gcttttaaactgcttctacttgacattctcgctcgatatatgactcattcgaaatataagttgaaat 497  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42447158 gcttttaaactgcttctacttgacattctcgctcgatatacgactcattcgaaatataagttgaaat 42447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 494 - 564
Target Start/End: Complemental strand, 17434797 - 17434728
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17434797 aaatatat-ttttttggatataacaaactttgagaaaattatggtgaatttagttaagaaccatacgaaaa 17434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 521 - 585
Target Start/End: Original strand, 7737162 - 7737226
Alignment:
Q  521 ctttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  7737162 ctttgaggaaatcatggtaaatttagttaagaatcatacgaaaagcacctaaggaattgtaccta 7737226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 2818764 - 2818827
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  2818764 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaagaattgtaccta 2818827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 585
Target Start/End: Original strand, 10552984 - 10553042
Alignment:
Q  527 gaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  10552984 gaaaatcatggtgaatttagttaagaatcatacgaaaaacacctaaggaattgtaccta 10553042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 521 - 585
Target Start/End: Original strand, 16705830 - 16705894
Alignment:
Q  521 ctttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||| ||| ||||||||||||    
T  16705830 ctttgagaaaatcatagtgaatttagttaaaaaccatacgaaaagcacctaaggaattgtaccta 16705894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 9933642 - 9933580
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  9933642 tttgagaaaatcatggtgaatttagttaagaaccataggaaaagcac-taatgaattgtaccta 9933580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 27920670 - 27920733
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||    
T  27920670 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcagctaaaaaattgtaccta 27920733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 1924046 - 1923990
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  1924046 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtaccta 1923990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 42713850 - 42713794
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaatt 578  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||    
T  42713850 tttgagaaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaatt 42713794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 24101905 - 24101842
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||  ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  24101905 tttgaggaaatcatggtatatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 24101842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 43476044 - 43476107
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||    
T  43476044 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaattataccta 43476107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 45408723 - 45408786
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  45408723 tttgaggaaatcatggtaaatttaattaagaaccatacgaaaagcacctaaggaattgtaccta 45408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 9281465 - 9281427
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9281465 aaatatatattttttggatataacaaactttgagaaaat 9281427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 40362580 - 40362622
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  40362580 tttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 40362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 574
Target Start/End: Complemental strand, 9850827 - 9850779
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaag 574  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  9850827 agaaaatcatggtaaatttagttaagaaccatacgaaaagcacctaaag 9850779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 2818719 - 2818676
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  2818719 tttagttaagaatcatacgaaaagcacctaaggaattgtaccta 2818676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 3116929 - 3116972
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  3116929 aaatacatattttttggatataacaaactttgagaaaattatgg 3116972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 3116974 - 3117037
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||  ||  ||||||||||||    
T  3116974 tttgagaaaatcataatgaatttagttaagaaccatacgaaaagcagctatggaattgtaccta 3117037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 6605833 - 6605895
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  6605833 tttgaggaaatcatggtaaatttagt-aagaaccatacaaaaagcacctaaagaattgtaccta 6605895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 12850660 - 12850617
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  12850660 aaatacatattttttggatataacaaactttgagaaaattatgg 12850617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 22269775 - 22269818
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  22269775 aaatacatattttttggatataacaaactttgagaaaattatgg 22269818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 24101950 - 24101907
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  24101950 aaatacatattttttggatataacaaactttgagaaaattatgg 24101907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 34490509 - 34490552
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  34490509 aaatacatattttttggatataacaaactttgagaaaattatgg 34490552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 45408678 - 45408721
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  45408678 aaatacatattttttggatataacaaactttgagaaaattatgg 45408721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 29229436 - 29229371
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacg--aaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| ||||| |||||||||||||||||  ||||||||||||  |||||||||||    
T  29229436 tttgaggaaatcatgatgaatatagttaagaatcatacgaaaaaagcacataagtaattgtaccta 29229371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 29342736 - 29342671
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacg--aaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| ||||| |||||||||||||||||  ||||||||||||  |||||||||||    
T  29342736 tttgaggaaatcatgatgaatatagttaagaatcatacgaaaaaagcacataagtaattgtaccta 29342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 34455938 - 34455976
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34455938 aaatacatattttttggatataacaaactttgagaaaat 34455976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 583
Target Start/End: Complemental strand, 9281420 - 9281359
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||| ||||||| ||||||||||||||||| |||| |||||| || ||| ||||||||||    
T  9281420 tttgaggaaatcatagtgaatttagttaagaaccatatgaaaagtacctaaggaattgtacc 9281359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 524 - 585
Target Start/End: Original strand, 34490556 - 34490617
Alignment:
Q  524 tgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||| ||||||||||   |||||||||||| |||||||||||||| ||| ||||||||||||    
T  34490556 tgaggaaatcatggtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 34490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 3116929 - 3116886
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| ||||||||||||||  |||||||||||||||    
T  3116929 tttagttaagaaccatacgaaaagcaccaaaagaattgtaccta 3116886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 12850615 - 12850552
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| ||||||||||| || ||||| ||||| || ||| ||||||||||||    
T  12850615 tttgaggaaatcatggtaaatttagttaaaaaccatacaaaaagtacctaaggaattgtaccta 12850552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 16705786 - 16705743
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  16705786 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 16705743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 16705786 - 16705829
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  16705786 aaatacatattttttggatataacaaactttgataaaattatgg 16705829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 34490509 - 34490466
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||    
T  34490509 tttagttaagaaccatacgaaaaacacctaaagaattgtaccta 34490466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 538 - 585
Target Start/End: Original strand, 43858548 - 43858595
Alignment:
Q  538 tgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||| ||||||||||| || ||| ||||||||||||    
T  43858548 tgaatttagttaagaaccatacgaaaagtacctaaggaattgtaccta 43858595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 1924089 - 1924055
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  1924089 ttttttggatataacaaactttgagaaaattatgg 1924055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 6605788 - 6605826
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  6605788 aaatacatattatttggatataacaaactttgagaaaat 6605826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 23835939 - 23835973
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  23835939 ttttttggatataacaaactttgagaaaattatgg 23835973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 537
Target Start/End: Original strand, 27920631 - 27920668
Alignment:
Q  500 atattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  27920631 atattttttggatataacaaactttgaaaaaattatgg 27920668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 581
Target Start/End: Complemental strand, 17500064 - 17500020
Alignment:
Q  537 gtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||||||||||||||| |||||||||| |||||||  |||||||    
T  17500064 gtgaatttagttaagaaccatacgaaaaacacataagaaattgta 17500020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 20892937 - 20892981
Alignment:
Q  494 aaatatatattttt-tggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||    
T  20892937 aaatacatatttttatggatataacaaactttgagaaaattatgg 20892981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 578
Target Start/End: Original strand, 20893003 - 20893039
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaatt 578  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  20893003 tttagttaagaatcatacgaaaagcacctaaggaatt 20893039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 23835929 - 23835889
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||||||||||||| ||| |||||||||    
T  23835929 tttagttaagaaccatacgaaaagcacctaaggaattgtac 23835889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 24101950 - 24101990
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||||||||||||| ||| |||||||||    
T  24101950 tttagttaagaaccatacgaaaagcacctaaggaattgtac 24101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 532
Target Start/End: Original strand, 43476001 - 43476037
Alignment:
Q  496 atatatattttttggatataacaaactttgagaaaat 532  Q
    |||||| |||||||||||||| |||||||||||||||    
T  43476001 atatattttttttggatataataaactttgagaaaat 43476037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 585
Target Start/End: Complemental strand, 72389 - 72298
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||  ||| ||||||||||||    
T  72389 aaatacatattttttggatataacaaactctgagaaaattatggtgaatttagctaagaatcatacaaaaagcatctaaggaattgtaccta 72298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 585
Target Start/End: Complemental strand, 35665734 - 35665643
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| |||  |||||||||||    
T  35665734 aaatacatattttttggatataacaaactttgagaaaatcatggtatttttagttaagaaccatacgaaaagcacctaagcaattgtaccta 35665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 20184311 - 20184248
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  20184311 tttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacctaaggaattgtaccta 20184248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 24836118 - 24836181
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  24836118 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 24836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 30259139 - 30259076
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  30259139 tttgagaaaatcatggtgaatttagttaagaaccataggaaaagcacctaaggaattgtaccta 30259076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 12142291 - 12142352
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||    
T  12142291 tttgagaaaatcatggtgaatttagttaagaactatacgaaaaacacataaggaattgtacc 12142352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 590
Target Start/End: Original strand, 30594791 - 30594859
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacctatgctt 590  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||| ||||    
T  30594791 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctt 30594859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 3953115 - 3953052
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||    
T  3953115 tttgaggaaatcatggtgaatttagttaaaaaccatacgaaaagtacataaggaattgtaccta 3953052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 31231687 - 31231624
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  31231687 tttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaggaattgtaccta 31231624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 34052377 - 34052440
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||    
T  34052377 tttgaggaaatcatggtgaatttagctaagaaccatacgaaaagcacctaaggaattgtaccta 34052440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 35339344 - 35339288
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  35339344 aaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 35339288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 45997581 - 45997518
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||||||   |||||||||||    
T  45997581 tttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacatatgaaattgtaccta 45997518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 37093821 - 37093859
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37093821 aaatatatattttttggatataacaaactttgagaaaat 37093859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 40358213 - 40358259
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcac 568  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  40358213 tttgaggaaatcatggtgaatttagttaagaatcataggaaaagcac 40358259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 567
Target Start/End: Complemental strand, 31521598 - 31521553
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagca 567  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||    
T  31521598 tttgagaaaatcatggtaaatttagttaagaaccatacgaaaagca 31521553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 10936543 - 10936483
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| || |||||||||||||||||||||| | |||||||||||| ||| |||||||||    
T  10936543 tttgaggaagtcatggtgaatttagttaagaaccgtacgaaaagcacctaaggaattgtac 10936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 9285787 - 9285724
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||| ||||||| ||||| ||||||||  || ||||||||||||    
T  9285787 tttgaggaaatcatggtgaatttaattaagaaccatacaaaaagcaccaaatgaattgtaccta 9285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 9289854 - 9289791
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||| ||||||| ||||| ||||||||  || ||||||||||||    
T  9289854 tttgaggaaatcatggtgaatttaattaagaaccatacaaaaagcaccaaatgaattgtaccta 9289791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 25742549 - 25742506
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  25742549 aaatacatattttttggatataacaaactttgagaaaattatgg 25742506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 30259184 - 30259141
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  30259184 aaatacatattttttggatataacaaactttgagaaaattatgg 30259141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 30594746 - 30594789
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  30594746 aaatacatattttttggatataacaaactttgagaaaattatgg 30594789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 35339396 - 35339353
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  35339396 aaatacatattttttggatataacaaactttgagaaaattatgg 35339353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 38883274 - 38883317
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  38883274 aaatacatattttttggatataacaaactttgagaaaattatgg 38883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 24836073 - 24836111
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24836073 aaatacatattttttggatataacaaactttgagaaaat 24836111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 34052332 - 34052370
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34052332 aaatacatattttttggatataacaaactttgagaaaat 34052370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 29277942 - 29277998
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||| ||||||||| |||  | |||| ||||||||||||    
T  29277942 aaatcatggtgaatttagttaaaaatcatacggaaaatatataaggaattgtaccta 29277998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 3953160 - 3953117
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||    
T  3953160 aaatacatattttttggatataacaaactttgtgaaaattatgg 3953117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 10936588 - 10936631
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  10936588 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 10936631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 20184357 - 20184400
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  20184357 tttagttaagaatcatacgaaaagcagctaaggaattgtaccta 20184400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 537
Target Start/End: Complemental strand, 24123869 - 24123830
Alignment:
Q  498 atatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  24123869 atattttttttggatataacaaactttgagaaaattatgg 24123830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 31231734 - 31231777
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  31231734 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 31231777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 565
Target Start/End: Original strand, 37093866 - 37093909
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaag 565  Q
    |||||| |||||||||||||||||||||| || |||||||||||    
T  37093866 tttgaggaaatcatggtgaatttagttaaaaaccatacgaaaag 37093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 38528530 - 38528573
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  38528530 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 38528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 39143785 - 39143722
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||| |||||||||||||| ||||| |||||||||||||   || ||||||||||||    
T  39143785 tttgaggaaattatggtgaatttagtcaagaaccatacgaaaagcatccaatgaattgtaccta 39143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 45997626 - 45997583
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  45997626 aaatacatattttttggatataataaactttgagaaaattatgg 45997583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 9285832 - 9285794
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  9285832 aaatacatattttttggatataacaaactttgataaaat 9285794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 9289899 - 9289861
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  9289899 aaatacatattttttggatataacaaactttgataaaat 9289861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 10936588 - 10936550
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  10936588 aaatacatattttttggttataacaaactttgagaaaat 10936550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 543 - 585
Target Start/End: Complemental strand, 33721879 - 33721837
Alignment:
Q  543 ttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtaccta 33721837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 39617950 - 39617916
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  39617950 ttttttggatataacaaactttgagaaaattatgg 39617916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 528
Target Start/End: Original strand, 48103421 - 48103455
Alignment:
Q  494 aaatatatattttttggatataacaaactttgaga 528  Q
    ||||| |||||||||||||||||||||||||||||    
T  48103421 aaatacatattttttggatataacaaactttgaga 48103455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 539 - 581
Target Start/End: Original strand, 48103480 - 48103522
Alignment:
Q  539 gaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||    
T  48103480 gaatttagttaagaaccatacaaaaagcacctaaagaattgta 48103522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 20184347 - 20184318
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  20184347 ttttttggatataacaaactttgagaaaat 20184318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 586
Target Start/End: Complemental strand, 22723280 - 22723235
Alignment:
Q  541 atttagttaagaatcatacgaaaagcacataaagaattgtacctat 586  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||    
T  22723280 atttagttaagaatcatacgaaaaacacctaaaaaattgtatctat 22723235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 562
Target Start/End: Complemental strand, 39617907 - 39617874
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaa 562  Q
    ||||||||||||||||||||||||| ||||||||    
T  39617907 aaatcatggtgaatttagttaagaaccatacgaa 39617874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 12142245 - 12142289
Alignment:
Q  494 aaatatatat-tttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||    
T  12142245 aaatatatatatttttggatataacaatctttgagaaaattatgg 12142289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 39617960 - 39618000
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||  ||||||||||||| |||||||||||||    
T  39617960 tttagttaagaactatacgaaaagcacctaaagaattgtac 39618000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 532
Target Start/End: Original strand, 40358174 - 40358206
Alignment:
Q  500 atattttttggatataacaaactttgagaaaat 532  Q
    ||||||||| |||||||||||||||||||||||    
T  40358174 atatttttttgatataacaaactttgagaaaat 40358206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 15882299 - 15882362
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  15882299 tttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 15882362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 17426701 - 17426638
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  17426701 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaatgaattgtaccta 17426638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 24741896 - 24741833
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  24741896 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 24741833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 40891111 - 40891174
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  40891111 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 40891174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 543
Target Start/End: Original strand, 4035794 - 4035843
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatt 543  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4035794 aaatatatattttttggatataacaaattttgagaaaatcatggtgaatt 4035843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 522 - 583
Target Start/End: Complemental strand, 23940877 - 23940816
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  23940877 tttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacttaagaaattgtacc 23940816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 14834741 - 14834685
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  14834741 agaaaatcatggtgaatttagttaagaaccatacgaaaagcacgtaaggaattgtac 14834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 4262048 - 4261989
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  4262048 ttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 38520116 - 38520179
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||    
T  38520116 tttgaggaaatcatggtgaatttagttaaaaaacatacgaaaagcacttaaggaattgtaccta 38520179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 38629572 - 38629635
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||    
T  38629572 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaattgtaccta 38629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 35467275 - 35467328
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  35467275 aaatcatgatgaatttagttaagaaccatacgaaaagcacataaggaattgtac 35467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 585
Target Start/End: Original strand, 37114340 - 37114399
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  37114340 agaaaatcatggtgaatttagttaagaaccatacaaaaaacatctaaagaattgtaccta 37114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 38520071 - 38520109
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38520071 aaatatatattttttggatataacaaactttgagaaaat 38520109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 8210378 - 8210419
Alignment:
Q  496 atatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  8210378 atatatattttttggatataacaaactttgagaaaattatgg 8210419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 24211337 - 24211288
Alignment:
Q  536 ggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  24211337 ggtgaatttaattaagaaccatacgaaaagcacctaaagaattgtaccta 24211288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 541 - 585
Target Start/End: Complemental strand, 8210377 - 8210333
Alignment:
Q  541 atttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  8210377 atttagttaagaatcatacgaaaagcacctaaggaattgtaccta 8210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 29781032 - 29780969
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||| ||||| ||||||||||| || |||||||||||||| ||| ||||||||||||    
T  29781032 tttgaggaaattatggtaaatttagttaaaaaccatacgaaaagcacctaaggaattgtaccta 29780969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 29781077 - 29781034
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  29781077 aaatacatattttttggatataacaaactttgagaaaattatgg 29781034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 553
Target Start/End: Original strand, 8920150 - 8920192
Alignment:
Q  511 atataacaaactttgagaaaatcatggtgaatttagttaagaa 553  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  8920150 atataacaaactttgagaaaattatggtgaatttaggtaagaa 8920192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 40891066 - 40891104
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  40891066 aaatacatattttttggatataacaaactttgagaaaat 40891104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 4262094 - 4262051
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||    
T  4262094 aaatacatattttttgaatataacaaactttgagaaaattatgg 4262051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 12234565 - 12234628
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| |||||||||||||| || |||||||||||||  |||  |||||||||||    
T  12234565 tttgaggaaatcatcgtgaatttagttaataaccatacgaaaagcatctaagaaattgtaccta 12234628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 532
Target Start/End: Complemental strand, 17426743 - 17426708
Alignment:
Q  497 tatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17426743 tatattttttttggatataacaaactttgagaaaat 17426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 17426748 - 17426791
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| |||| |||||||||||    
T  17426748 tttagttaagaaccatacgaaaagcacctaaaaaattgtaccta 17426791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 37114291 - 37114334
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  37114291 aaatacatattttttggatataataaactttgagaaaattatgg 37114334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 522 - 564
Target Start/End: Complemental strand, 11828669 - 11828627
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    |||||| |||| |||||||||||||||||||| ||||||||||    
T  11828669 tttgaggaaattatggtgaatttagttaagaaccatacgaaaa 11828627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 38629527 - 38629565
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  38629527 aaatacatattttttggatataataaactttgagaaaat 38629565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 537
Target Start/End: Complemental strand, 33100757 - 33100720
Alignment:
Q  500 atattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  33100757 atatttttttgatataacaaactttgagaaaattatgg 33100720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Original strand, 38405201 - 38405230
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  38405201 ttttttggatataacaaactttgagaaaat 38405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 8210421 - 8210481
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| |||||||| ||||||| |||||||||||||| |||| ||  ||| |||||||||    
T  8210421 tttgaggaaatcatgatgaatttggttaagaatcatacaaaaaacatctaaggaattgtac 8210481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 24211397 - 24211353
Alignment:
Q  493 gaaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||| ||||||||| ||||||||||||| ||||||||| ||||    
T  24211397 gaaatacatattttttagatataacaaactatgagaaaattatgg 24211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 33940702 - 33940766
Alignment:
Q  518 aaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||| ||||||||||||| |||||||||||||| |||  || || ||| ||| |||||||||    
T  33940702 aaactttaagaaaatcatggtaaatttagttaagaaccatgtgacaaacacctaaggaattgtac 33940766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 582
Target Start/End: Original strand, 38405241 - 38405297
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||  |||||||||||||||| ||||| |||| |||||||  ||||||||    
T  38405241 agaaaatcattatgaatttagttaagaaccatacaaaaaacacataagaaattgtac 38405297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 38629527 - 38629487
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||||||||||||  |||||||||||||    
T  38629527 tttagttaagaaccatacgaaaagcatttaaagaattgtac 38629487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 24915867 - 24915804
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  24915867 tttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 24915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 24969614 - 24969551
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  24969614 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaagaattgtaccta 24969551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 524 - 585
Target Start/End: Complemental strand, 32318791 - 32318730
Alignment:
Q  524 tgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  32318791 tgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacataaggaattgtaccta 32318730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 1299010 - 1299073
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  1299010 tttgagaaaatcatggtgaatttagttaagaaccataagaaaagcacctaaggaattgtaccta 1299073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 518 - 585
Target Start/End: Complemental strand, 43486277 - 43486210
Alignment:
Q  518 aaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| || ||| ||||||||||||    
T  43486277 aaactttgagaaaatcatggtgaatttagttaagaaccataggaaaagtacctaaggaattgtaccta 43486210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 13204475 - 13204538
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||    
T  13204475 tttgaggaaatcatggtgaatttagttaaaaaccatacgaaaagtacataaggaattgtaccta 13204538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 21048778 - 21048715
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  21048778 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaacgaattgtaccta 21048715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 23928640 - 23928578
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  23928640 tttgaggaaatcatggtgaatttagttaagaatcatacgaaaaacac-taaggaattgtaccta 23928578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 42274565 - 42274502
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  42274565 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtaccta 42274502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 2272471 - 2272525
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  2272471 aaatcatggtgaatttagctaagaaccatacgaaaagcacataatgaattgtacc 2272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 530742 - 530679
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||| |||||||||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  530742 tttgaggaaatgatggtgaatttagttaagaaccatacaaaaagcacctaaggaattgtaccta 530679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 18417710 - 18417753
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  18417710 aaatatatattttttggatataacaaactttgagaaaattatgg 18417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 18417755 - 18417818
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||||| ||| ||||||||||||    
T  18417755 tttgaggaaatcatggtgaatttaattaagaaccatacaaaaagcacctaaggaattgtaccta 18417818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 32318838 - 32318800
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32318838 aaatatatattttttggatataacaaactttgagaaaat 32318800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 9355619 - 9355566
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||| |||||||||    
T  9355619 aaatcatggtgaatttagttaagaaccatatgaaaagcacctaaggaattgtac 9355566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 36030998 - 36030949
Alignment:
Q  536 ggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  36030998 ggtgaatttagttaagaaacatacgaaaagcacgtaaggaattgtaccta 36030949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 6966772 - 6966708
Alignment:
Q  407 tcttgatttctttgtcacatctttgcttttaaactgcttctacttgacattctcgctcgatatat 471  Q
    |||||| ||||||| ||| |||| |||||| |||||||||||||||||||||| |||||| ||||    
T  6966772 tcttgacttctttgacacttcttcgcttttgaactgcttctacttgacattcttgctcgaaatat 6966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 27434708 - 27434768
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| |||| ||||| |||||||||||||| |||||||||||||| ||| |||||||||    
T  27434708 tttgaggaaattatggtaaatttagttaagaaccatacgaaaagcacctaaggaattgtac 27434768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 55049473 - 55049413
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| ||||||| |||||||||||||||||  ||||||||||||| ||| |||||||||    
T  55049473 tttgaggaaatcatagtgaatttagttaagaactatacgaaaagcacctaaggaattgtac 55049413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 530787 - 530744
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  530787 aaatacatattttttggatataacaaactttgagaaaattatgg 530744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 1298965 - 1299008
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  1298965 aaatacatattttttggatataacaaactttgagaaaattatgg 1299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 4552838 - 4552881
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  4552838 aaataaatattttttggatataacaaactttgagaaaattatgg 4552881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 4552883 - 4552946
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| |||||||||||||||| |||||  |||||| |||| ||||||||||||    
T  4552883 tttgaggaaatcatgatgaatttagttaagaaccatacagaaagcatataaggaattgtaccta 4552946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 4688320 - 4688257
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||  ||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  4688320 tttgaggaaatcacagtgaatttagttaagaaccatacgaaaagcacctaagaaattgtaccta 4688257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 20435213 - 20435154
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||  ||| ||||||||    
T  20435213 tttgaggaaatcatgatgaatttagttaagaaccatacgaaaagcatctaaggaattgta 20435154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 20435258 - 20435301
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  20435258 tttagttaagaaccatacgaaaagcacctaaagaattgtaccta 20435301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 55107622 - 55107685
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| |||||||| ||||| ||||| |||||||| ||| ||||||||||||    
T  55107622 tttgaggaaatcatggtaaatttagtaaagaaccatacaaaaagcacctaaggaattgtaccta 55107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 35360781 - 35360834
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||||||||||||||| |||||||||| ||  |||| ||||||||    
T  35360781 aaatcatggtgaatttagttaagaaccatacgaaaaacaactaaaaaattgtac 35360834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 28809966 - 28809922
Alignment:
Q  493 gaaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||    
T  28809966 gaaatacatattttttggatataacaaattttgagaaaattatgg 28809922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 42274611 - 42274567
Alignment:
Q  494 aaatatatatttttt-ggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  42274611 aaatatatatttttttggatataacaaactttgagaaaattatgg 42274567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 530787 - 530830
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  530787 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 530830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 6967173 - 6967092
Alignment:
Q  61 aaagtgtgggaaaagggaaatgagttctattatattctatttgagtttcatacaccattctttcaatgtttccgataggagtgttatc 148  Q
    |||||||| ||||||| ||||||||||||||     |||||||||||||||||| | |||||||||| |||  | |||||||||||||    
T  6967173 aaagtgtgcgaaaaggaaaatgagttctatt-----ctatttgagtttcatacatcgttctttcaatattttag-taggagtgttatc 6967092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 13204430 - 13204473
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||    
T  13204430 aaatacatattttttggatataacaaactttgtgaaaattatgg 13204473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 18417710 - 18417667
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  18417710 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 18417667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 20435258 - 20435215
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||    
T  20435258 aaatacatattttttggatataacaaacttcgagaaaattatgg 20435215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 23928685 - 23928642
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||    
T  23928685 aaatatattttttttggatataacaaattttgagaaaattatgg 23928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 35360729 - 35360772
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  35360729 aaatacatattttttagatataacaaactttgagaaaattatgg 35360772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 37525061 - 37525104
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| || ||||||||||| ||||||||||||||||    
T  37525061 tttagttaagaaccacacgaaaagcacctaaagaattgtaccta 37525104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 47465102 - 47465145
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||    
T  47465102 tttagttaaaaatcatatgaaaagcacctaaagaattgtaccta 47465145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 52587433 - 52587390
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  52587433 aaatatataattttttgatataacaaactttgagaaaattatgg 52587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 52824292 - 52824249
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  52824292 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 52824249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 55107577 - 55107534
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  55107577 tttagttaagaaccatatgaaaagcacataaggaattgtaccta 55107534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 4895025 - 4895063
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  4895025 aaatacatattttttgaatataacaaactttgagaaaat 4895063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 24294520 - 24294558
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  24294520 aaatacatatttttttgatataacaaactttgagaaaat 24294558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 24294565 - 24294607
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    |||||| |||| |||||||||||||||||||| ||||||||||    
T  24294565 tttgaggaaattatggtgaatttagttaagaaccatacgaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 27434663 - 27434701
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  27434663 aaatacattttttttggatataacaaactttgagaaaat 27434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 55107577 - 55107615
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  55107577 aaatacatattatttggatataacaaactttgagaaaat 55107615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 4688356 - 4688327
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  4688356 ttttttggatataacaaactttgagaaaat 4688327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 24915903 - 24915874
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  24915903 ttttttggatataacaaactttgagaaaat 24915874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 24969650 - 24969621
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  24969650 ttttttggatataacaaactttgagaaaat 24969621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 23928685 - 23928725
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||||||||| ||||||| ||| |||||||||    
T  23928685 tttagttaagaatcatacgcaaagcacctaaggaattgtac 23928725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 28809920 - 28809856
Alignment:
Q  522 tttgagaaaatcatggtg-aatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||| ||||||||||| ||  |||| |||||||| |||  |||||||||||    
T  28809920 tttgagaaaatcatggtgaaatttagttaaaaacaataccaaaagcacctaagaaattgtaccta 28809856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 32318838 - 32318878
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||| |||||||||||| ||||||||| |||||||||||||    
T  32318838 tttaattaagaatcatatgaaaagcacctaaagaattgtac 32318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 9978124 - 9978061
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9978124 tttgaggaaatcatagtgaatttagttaagaatcatacgaaaagcacataaggaattgtaccta 9978061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 27240997 - 27240934
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  27240997 tttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 27240934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 362462 - 362518
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  362462 aaatcatggtaaatttagttaagaatcatacgaaaagcacctaaagaattgtaccta 362518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 19954984 - 19954921
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  19954984 tttgaggaaatcatggtgaatttagttaagaactatacgaaaagcacataaggaattgtaccta 19954921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 40647216 - 40647279
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  40647216 tttgaggaaatcatggtgaatttagttaaaaatcatacgaaaagcacctaaggaattgtaccta 40647279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 15324725 - 15324785
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  15324725 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacataaggaattgtac 15324785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 957687 - 957746
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||||    
T  957687 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaaacacctaagaaattgta 957746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 523 - 585
Target Start/End: Complemental strand, 50856393 - 50856331
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  50856393 ttgaggaaataatggtgaatttagctaagaatcatacgaaaagcacctaaagaattttaccta 50856331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 528 - 581
Target Start/End: Complemental strand, 2125137 - 2125084
Alignment:
Q  528 aaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  2125137 aaaatcatggtgaatttagttaagaaccatacgaaaagcacataagaaattgta 2125084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 42561361 - 42561308
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  42561361 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtac 42561308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 5189574 - 5189630
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  5189574 aaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtaccta 5189630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 47940636 - 47940580
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  47940636 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtaccta 47940580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 14387088 - 14387025
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||  ||| ||||||||||||    
T  14387088 tttgaggaaatcatggtgaatttagttaagaaccatacgaaatgcatctaaggaattgtaccta 14387025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 2854650 - 2854612
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2854650 aaatatatattttttggatataacaaactttgagaaaat 2854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 23698620 - 23698582
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23698620 aaatatatattttttggatataacaaactttgagaaaat 23698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 27241042 - 27241004
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27241042 aaatatatattttttggatataacaaactttgagaaaat 27241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 523 - 585
Target Start/End: Complemental strand, 27926323 - 27926261
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  27926323 ttgaggaaatcacagtgaatttagttaagaaccatacgaaaagcacataaggaattataccta 27926261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 48954332 - 48954294
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48954332 aaatatatattttttggatataacaaactttgagaaaat 48954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 523 - 585
Target Start/End: Complemental strand, 51789669 - 51789607
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||| |||||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||    
T  51789669 ttgaggaaatcatggtgaatttagttaaaaaccatacgaaaatcacctaaggaattgtaccta 51789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 522 - 566
Target Start/End: Original strand, 6079482 - 6079526
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagc 566  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  6079482 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 28447991 - 28447927
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcata 558  Q
    |||||||| ||||||  ||||||||||||||||||||||||| || |||||| ||||||| ||||    
T  28447991 aaatatatctttttttaatataacaaactttgagaaaatcatagtaaatttaattaagaaccata 28447927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 1387876 - 1387939
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||   |||||||||||| |||||||||||||| ||| ||||||||||||    
T  1387876 tttgaggaaatcatggtatctttagttaagaaccatacgaaaagcacctaaggaattgtaccta 1387939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 2854605 - 2854542
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||| |  ||| ||||||||||||    
T  2854605 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagtatctaaggaattgtaccta 2854542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 3607847 - 3607804
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  3607847 aaatacatattttttggatataacaaactttgagaaaattatgg 3607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 5189522 - 5189565
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  5189522 aaatacatattttttggatataacaaactttgagaaaattatgg 5189565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 6079437 - 6079480
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  6079437 aaatacatattttttggatataacaaactttgagaaaattatgg 6079480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 23698575 - 23698512
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||| |  ||| ||||||||||||    
T  23698575 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagtatctaaggaattgtaccta 23698512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 27670248 - 27670299
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgt 580  Q
    |||||||| ||||||||||||| || |||||||||||||||||| |||||||    
T  27670248 aaatcatgatgaatttagttaaaaaccatacgaaaagcacataaggaattgt 27670299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 42561413 - 42561370
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  42561413 aaatacatattttttggatataacaaactttgagaaaattatgg 42561370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 48954287 - 48954224
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| |||| |||||| || ||| ||||||||||||    
T  48954287 tttgaggaaatcatagtgaatttagttaagaaccatatgaaaagtacctaaggaattgtaccta 48954224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 50627184 - 50627227
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  50627184 aaatacatattttttggatataacaaactttgagaaaattatgg 50627227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 19955029 - 19954991
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19955029 aaatacatattttttggatataacaaactttgagaaaat 19954991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 27928370 - 27928312
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||| ||||||  ||||||||||||||||| ||||| |||||||||||| ||||||||    
T  27928370 ttgaggaaatcacagtgaatttagttaagaaccatacaaaaagcacataaggaattgta 27928312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 3607802 - 3607739
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| |||||||||||||||| ||||| |||||||| |||  |||| ||||||    
T  3607802 tttgaggaaatcatgatgaatttagttaagaaccatacaaaaagcacctaagaaattctaccta 3607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 5189522 - 5189479
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  5189522 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 5189479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 9978170 - 9978213
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  9978170 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 9978213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 14387133 - 14387090
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  14387133 aaatacatattttttggatataataaactttgagaaaattatgg 14387090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 19797099 - 19797056
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  19797099 aaatacatattttttggatataacaaactttgaaaaaattatgg 19797056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 19797099 - 19797142
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  19797099 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 19797142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 585
Target Start/End: Original strand, 21930488 - 21930539
Alignment:
Q  534 atggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||| |||||||||| ||| |||  |||||||||||    
T  21930488 atggtgaatttagttaagaaccatacgaaaaacacctaagtaattgtaccta 21930539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 537
Target Start/End: Complemental strand, 27926364 - 27926325
Alignment:
Q  498 atatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  27926364 atattttttttggatataacaaactttgagaaaattatgg 27926325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 28244011 - 28244054
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| || |||||||||||||||||||||||||||||| ||||    
T  28244011 aaatacatcttttttggatataacaaactttgagaaaattatgg 28244054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 36880609 - 36880672
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||   |||||||||||| |||||||||||||  ||| ||||||||||||    
T  36880609 tttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtaccta 36880672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 48645132 - 48645089
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  48645132 aaatacatattttttagatataacaaactttgagaaaattatgg 48645089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 585
Target Start/End: Complemental strand, 49284363 - 49284304
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||| ||||| |||| ||  |||  |||||||||||    
T  49284363 agaaaatcatggtgaatttagttaagaaccatacaaaaaacaactaagaaattgtaccta 49284304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 49285093 - 49285136
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  49285093 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 49285136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 50627249 - 50627292
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||    
T  50627249 tttagttaagaaccatacgaaaagcatataaggaattgtaccta 50627292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 1387831 - 1387869
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  1387831 aaatacatattttttggatataataaactttgagaaaat 1387869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 2125188 - 2125150
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  2125188 aaatacatatttttttgatataacaaactttgagaaaat 2125150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 4299501 - 4299467
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  4299501 ttttttggatataacaaactttgagaaaattatgg 4299467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 9895306 - 9895344
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  9895306 aaatacatatttttttgatataacaaactttgagaaaat 9895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 15324689 - 15324723
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  15324689 ttttttggatataacaaactttgagaaaattatgg 15324723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 26208487 - 26208521
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  26208487 ttttttggatataacaaactttgagaaaattatgg 26208521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 27928406 - 27928372
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  27928406 ttttttggatataacaaactttgagaaaattatgg 27928372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 47940679 - 47940645
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  47940679 ttttttggatataacaaactttgagaaaattatgg 47940645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 522 - 568
Target Start/End: Complemental strand, 51276768 - 51276722
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcac 568  Q
    |||||| |||||||  |||||||||||||||| ||||||||||||||    
T  51276768 tttgaggaaatcataatgaatttagttaagaaccatacgaaaagcac 51276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 9978160 - 9978131
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  9978160 ttttttggatataacaaactttgagaaaat 9978131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 578
Target Start/End: Original strand, 26208530 - 26208579
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaatt 578  Q
    |||| ||||||||||||||| |||| |||||||||||||| ||| |||||    
T  26208530 aaattatggtgaatttagttcagaaccatacgaaaagcacctaaggaatt 26208579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 50162647 - 50162618
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  50162647 ttttttggatataacaaactttgagaaaat 50162618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 27926370 - 27926410
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||||||||||||| ||| |||||||||    
T  27926370 tttagttaagaaccatacgaaaagcacctaaggaattgtac 27926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 585
Target Start/End: Original strand, 29598450 - 29598498
Alignment:
Q  537 gtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||| ||||| ||||| || ||| ||||||||||||    
T  29598450 gtgaatttagttaagaaccatacaaaaagtacctaacgaattgtaccta 29598498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 45932 - 45995
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  45932 tttgagaaaatcatggtgaatttagttaagaaccataagaaaagcacctaaggaattgtaccta 45995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 45887 - 45930
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  45887 aaatacatattttttggatataacaaactttgagaaaattatgg 45930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 885483 - 885546
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  885483 tttgagaaaatcatgatgaatttagttaagaatcataggaaaagcacctaaggaattgtaccta 885546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 21380014 - 21379951
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  21380014 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21379951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 594
Target Start/End: Original strand, 4238952 - 4239024
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacctatgcttctcc 594  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||||||||| | ||||||    
T  4238952 tttgagaaaatcatggtgaatttaattaagaaccatacaaaaagcacagaaggaattgtacctaagtttctcc 4239024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 3369083 - 3369146
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||| |||  ||||||||||||| ||| ||||||||||||    
T  3369083 tttgaggaaatcatggtgaatttagttaggaacgatacgaaaagcacctaacgaattgtaccta 3369146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 14393662 - 14393725
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||| ||| ||||| ||||||    
T  14393662 tttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaggaattataccta 14393725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 15546730 - 15546793
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  15546730 tttgaggaaatcatggtaaatttaattaagaaccatacgaaaagcacctaaggaattgtaccta 15546793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 8091167 - 8091223
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  8091167 aaatcacggtgaatttagttaagaaccatacgaaaagcacctaagcaattgtaccta 8091223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 885438 - 885481
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  885438 aaatacatattttttggatataacaaactttgagaaaattatgg 885481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 4890553 - 4890490
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||| |||||||||||||| |||||||||| ||| |||  |||||||||||    
T  4890553 tttgaggaaatcatggtaaatttagttaagaaccatacgaaaaacacctaagaaattgtaccta 4890490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 7808707 - 7808770
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||   |||||||||||| |||||||||||||| ||| ||||||||||||    
T  7808707 tttgaggaaatcatggtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 7808770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 8091115 - 8091158
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  8091115 aaatacatattttttggatataacaaactttgagaaaattatgg 8091158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 13172691 - 13172648
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  13172691 aaatacatattttttggatataacaaactttgagaaaattatgg 13172648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 15546685 - 15546728
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  15546685 aaatacatattttttggatataacaaactttgagaaaattatgg 15546728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 6433755 - 6433801
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcac 568  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  6433755 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcac 6433801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 7808662 - 7808700
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7808662 aaatacatattttttggatataacaaactttgagaaaat 7808700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 13439794 - 13439836
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  13439794 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 585
Target Start/End: Complemental strand, 17367115 - 17367074
Alignment:
Q  544 tagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  17367115 tagttaagaatcatacgaaaagaacataaggaattgtaccta 17367074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 14393614 - 14393574
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  14393614 tttagttaagaatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 18998182 - 18998127
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| | |||||||| ||| ||| ||||||||||||    
T  18998182 aaatcatggtgaatttagttaagaa-cgtacgaaaaacacctaaggaattgtaccta 18998127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 4890599 - 4890642
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  4890599 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 4890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 11687261 - 11687218
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  11687261 aaatacatatttttttgatataacaaactttgagaaaattatgg 11687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 20501759 - 20501802
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||    
T  20501759 aaatacatattttttggatataacaaacttcgagaaaattatgg 20501802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 21380059 - 21380102
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  21380059 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21380102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 29609054 - 29609011
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| || ||||||||||| ||||||||||||||||    
T  29609054 tttagttaagaaccacacgaaaagcacttaaagaattgtaccta 29609011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 3369038 - 3369076
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  3369038 aaatacatattttttgaatataacaaactttgagaaaat 3369076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 532
Target Start/End: Original strand, 4238911 - 4238945
Alignment:
Q  498 atatattttttggatataacaaactttgagaaaat 532  Q
    |||| ||||||||||||||||||||||||||||||    
T  4238911 atattttttttggatataacaaactttgagaaaat 4238945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 13439758 - 13439792
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  13439758 ttttttggatataacaaactttgagaaaattatgg 13439792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 522 - 564
Target Start/End: Complemental strand, 31764398 - 31764356
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaa 564  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  31764398 tttgagaaaataatggtgaatttagttaagaaccatacaaaaa 31764356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 4890589 - 4890560
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  4890589 ttttttggatataacaaactttgagaaaat 4890560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 14393627 - 14393660
Alignment:
Q  504 tttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||||||||||||||||| ||||    
T  14393627 tttttggatataacaaactttgagaaaattatgg 14393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 29609106 - 29609159
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| ||||||||||||||| || |||||||||||||  ||| |||||||||    
T  29609106 aaatcacggtgaatttagttaaaaaccatacgaaaagcatctaaggaattgtac 29609159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 3369038 - 3368998
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||||||||||||| ||| |||||||||    
T  3369038 tttagttaagaaccatacgaaaagcacctaaggaattgtac 3368998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 532
Target Start/End: Complemental strand, 31764437 - 31764405
Alignment:
Q  500 atattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||| ||||||||||||||||||    
T  31764437 atattttttggatacaacaaactttgagaaaat 31764405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 13754364 - 13754301
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  13754364 tttgaggaaattatggtgaatttagttaagaatcatacgaaaaacacataaggaattgtaccta 13754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 33629418 - 33629355
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  33629418 tttgagaaaatcatagtgaatttagttaagaaccataccaaaagcacataaggaattgtaccta 33629355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 2268675 - 2268748
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcatacgaaaagca 567  Q
    ||||| |||||||||| ||||||||||||||||| ||||||  ||||||||||||||||| ||||| |||||||    
T  2268675 aaatacatattttttgaatataacaaactttgaggaaatcacagtgaatttagttaagaaccatacaaaaagca 2268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 21259803 - 21259743
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  21259803 tttgaggaaatcatggtgaatttaactaagaaccatacgaaaagcacataaagaattgtac 21259743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 20476529 - 20476592
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  20476529 tttgaggaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 20476592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 12808016 - 12808072
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  12808016 aaatcatggtgaatttagtcaagaatcatacgaaaaacacttaaggaattgtaccta 12808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 12744924 - 12744987
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||||||    
T  12744924 tttgaggaaatcatggtgaatttagtcaaaaatcatacgaaaaacacctaaggaattgtaccta 12744987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 21591286 - 21591223
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||| | || |||||||||||||| ||| ||||||||||||    
T  21591286 tttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtaccta 21591223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 21595403 - 21595340
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||||||||||||||| | || |||||||||||||| ||| ||||||||||||    
T  21595403 tttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtaccta 21595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 33629461 - 33629420
Alignment:
Q  496 atatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  33629461 atatatattttttggatataacaaactttgagaaaattatgg 33629420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 32623281 - 32623225
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||| ||||||||||||||||| |||||||||| ||| ||| ||||||||||||    
T  32623281 aaatcatagtgaatttagttaagaaccatacgaaaaacacctaaggaattgtaccta 32623225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 1138612 - 1138655
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  1138612 aaatacatattttttggatataacaaactttgagaaaattatgg 1138655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 1138657 - 1138720
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||  ||  ||||||||||||    
T  1138657 tttgagaaaatcataatgaatttagttaagaaccatacgaaaagcagctatggaattgtaccta 1138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 1456140 - 1456097
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  1456140 aaatacatattttttggatataacaaactttgagaaaattatgg 1456097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 43539160 - 43539203
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  43539160 aaatacatattttttggatataacaaactttgagaaaattatgg 43539203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 4266087 - 4266141
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  4266087 aaatcacggtgaatttagttaagaaccatacgaaaaacacctaaggaattgtacc 4266141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 12744879 - 12744917
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12744879 aaatacatattttttggatataacaaactttgagaaaat 12744917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 21259848 - 21259810
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21259848 aaatacatattttttggatataacaaactttgagaaaat 21259810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 21261996 - 21262034
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21261996 aaatacatattttttggatataacaaactttgagaaaat 21262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 529 - 581
Target Start/End: Original strand, 10132359 - 10132411
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||| ||||||||||||||||||| ||||| |||| ||||||| ||||||||    
T  10132359 aaatcgtggtgaatttagttaagaaccatacaaaaaacacataaggaattgta 10132411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 1138612 - 1138569
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| ||||||||||||||  |||||||||||||||    
T  1138612 tttagttaagaaccatacgaaaagcaccaaaagaattgtaccta 1138569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 2255580 - 2255623
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| || ||||||||||| ||||||||||||||||    
T  2255580 tttagttaagaaccacacgaaaagcacctaaagaattgtaccta 2255623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 15855896 - 15855939
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  15855896 aaatacatatttttttgatataacaaactttgagaaaattatgg 15855939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 16473008 - 16473051
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  16473008 aaatacatatttttttgatataacaaactttgagaaaattatgg 16473051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 24397364 - 24397407
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  24397364 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 24397407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 35420730 - 35420687
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  35420730 aaatacatatttttttgatataacaaactttgagaaaattatgg 35420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 37552381 - 37552318
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| || |||||||||||||||||||||| | ||| ||||||||  || ||||||||||||    
T  37552381 tttgaggaagtcatggtgaatttagttaagaaccgtacaaaaagcacggaatgaattgtaccta 37552318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 42522922 - 42522879
Alignment:
Q  510 gatataacaaactttgagaaaatcatggtgaatttagttaagaa 553  Q
    ||||||||||||||||||||||||| | | ||||||||||||||    
T  42522922 gatataacaaactttgagaaaatcacgataaatttagttaagaa 42522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 585
Target Start/End: Original strand, 43539209 - 43539268
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||| | |||||||||||||| | |||||||||| ||| ||| ||||||||||||    
T  43539209 agaaaatcacgatgaatttagttaaggaccatacgaaaaacacctaaggaattgtaccta 43539268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 2529086 - 2529140
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||| |||||||||||||||||| || ||||||||||| |||  |||||||||    
T  2529086 aaatcacggtgaatttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 24397354 - 24397320
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  24397354 ttttttggatataacaaactttgagaaaattatgg 24397320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 566
Target Start/End: Original strand, 21262041 - 21262085
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagc 566  Q
    |||||| |||||||| |||||||||||||||| ||||| ||||||    
T  21262041 tttgaggaaatcatgatgaatttagttaagaaccatacaaaaagc 21262085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 35806988 - 35806948
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||| |||| ||||||||| |||||||||||||    
T  35806988 tttagttaagaaccatatgaaaagcacctaaagaattgtac 35806948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 10254667 - 10254730
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  10254667 tttgagaaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 10254730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 45487897 - 45487960
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  45487897 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 45487960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 55340366 - 55340303
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  55340366 tttgagaaaatcatggtgaatatagttaagaatcatacgaaaaacacataagaaattgtaccta 55340303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 8831846 - 8831902
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  8831846 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaaaaattgtaccta 8831902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 21969223 - 21969167
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  21969223 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21969167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 21991659 - 21991603
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  21991659 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21991603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 25446348 - 25446408
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  25446348 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtac 25446408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 22101263 - 22101326
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  22101263 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagctcataaggaattgtaccta 22101326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 22176207 - 22176270
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  22176207 tttgaggaaatcatagtgaatttagttaagaaccatacaaaaagcacataaggaattgtaccta 22176270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 35368831 - 35368894
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||||  |||||||||||    
T  35368831 tttgagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacataagaaattgtaccta 35368894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 50099532 - 50099595
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  50099532 tttgaggaaattatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 50099595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 524 - 585
Target Start/End: Complemental strand, 32237465 - 32237404
Alignment:
Q  524 tgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||| ||| ||||||||||||    
T  32237465 tgagaaaatcatggtaaatttagttaagaaccatacgaaaaacacctaaggaattgtaccta 32237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 3970557 - 3970501
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||    
T  3970557 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgcaccta 3970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 4072339 - 4072283
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  4072339 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtaccta 4072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 582
Target Start/End: Original strand, 12838175 - 12838235
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||| |||||||||||||||||||||| || |||||||||| ||| |||||||||||||    
T  12838175 tttgaggaaatcatggtgaatttagttaaaaaccatacgaaaaacacctaaagaattgtac 12838235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 13078229 - 13078173
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||    
T  13078229 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgcaccta 13078173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 404144 - 404203
Alignment:
Q  523 ttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||  |||||||||||||    
T  404144 ttgaggaaatcatggtgaatttagttaagaaccatacggaaagcatctaaagaattgtac 404203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 585
Target Start/End: Original strand, 49984033 - 49984092
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||| ||||||||| || |||| |||| ||||||    
T  49984033 agaaaatcatggtgaatttagttaagaatcgtacgaaaagtacctaaaaaattataccta 49984092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 26906507 - 26906545
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26906507 aaatatatattttttggatataacaaactttgagaaaat 26906545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 36278874 - 36278836
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36278874 aaatatatattttttggatataacaaactttgagaaaat 36278836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 585
Target Start/End: Original strand, 10117578 - 10117672
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg------------tgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||||||||||| ||||            |||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  10117578 ttttttggatataacaaactttgagaaaattatggatttgagaaaattgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 10117672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 25488407 - 25488354
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||||||    
T  25488407 aaatcatggtgaatttagttaagaactatacgaaaagcacctaaggaattgtac 25488354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 25561116 - 25561169
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||||||    
T  25561116 aaatcatggtgaatttagttaagaactatacgaaaagcacctaaggaattgtac 25561169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 43639147 - 43639098
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaatt 578  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  43639147 aaatcatggtgaatttggttaagaatcatacgaaaagcacctaaggaatt 43639098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 3970609 - 3970566
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  3970609 aaatacatattttttggatataacaaactttgagaaaattatgg 3970566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 10441376 - 10441333
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  10441376 aaatacatattttttggatataacaaactttgagaaaattatgg 10441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 12838130 - 12838173
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  12838130 aaatacatattttttggatataacaaactttgagaaaattatgg 12838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 13078281 - 13078238
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  13078281 aaatacatattttttggatataacaaactttgagaaaattatgg 13078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 25488459 - 25488416
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  25488459 aaatacatattttttggatataacaaactttgagaaaattatgg 25488416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 25561064 - 25561107
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  25561064 aaatacatattttttggatataacaaactttgagaaaattatgg 25561107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 26906552 - 26906615
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||| |  ||| ||||||||||||    
T  26906552 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagtatctaaggaattgtaccta 26906615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 32237512 - 32237469
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  32237512 aaatacatattttttggatataacaaactttgagaaaattatgg 32237469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 35368602 - 35368559
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  35368602 tttagttaagaaccatacgaaaagcacataaggaattgtaccta 35368559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 36278829 - 36278766
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||| |  ||| ||||||||||||    
T  36278829 tttgaggaaatcatagtgaatttagttaagaaccatacgaaaagtatctaaggaattgtaccta 36278766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 36329298 - 36329255
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  36329298 aaatacatattttttggatataacaaactttgagaaaattatgg 36329255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 36822878 - 36822835
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  36822878 aaatacatattttttggatataacaaactttgagaaaattatgg 36822835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 39850463 - 39850506
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  39850463 tttagttaagaatcatacgaaaagcacctaaggaattgtaccta 39850506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 43639200 - 43639243
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  43639200 tttagttaagaatcatacgaaaagcacctaaggaattgtaccta 43639243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 21969275 - 21969237
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21969275 aaatacatattttttggatataacaaactttgagaaaat 21969237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 21991711 - 21991673
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21991711 aaatacatattttttggatataacaaactttgagaaaat 21991673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 43150533 - 43150571
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  43150533 aaatacatattttttggatataacaaactttgagaaaat 43150571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 44611499 - 44611461
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44611499 aaatatatatttttttgatataacaaactttgagaaaat 44611461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 12789704 - 12789765
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacc 583  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||||| ||| ||||| ||||    
T  12789704 tttgaggaaatcatggtgaatttaattaagaaccatacaaaaagcacctaaggaattctacc 12789765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 563
Target Start/End: Original strand, 43150578 - 43150619
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaa 563  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  43150578 tttgaggaaatcatagtgaatttagttaagaatcatacgaaa 43150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 1476617 - 1476561
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||| | |||| ||||| |||||||| ||| ||||||||||||    
T  1476617 aaatcatggtgaatttaggttagaaccataccaaaagcacctaaggaattgtaccta 1476561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 39850463 - 39850419
Alignment:
Q  494 aaatatatattttttggatataacaaactt-tgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  39850463 aaatatatattttttggatataacaaacttgtgagaaaattatgg 39850419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 43639200 - 43639156
Alignment:
Q  494 aaatatatatttttt-ggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  43639200 aaatatatatttttttggatataacaaactttgagaaaattatgg 43639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 521 - 585
Target Start/End: Complemental strand, 45712977 - 45712913
Alignment:
Q  521 ctttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||| |||||||||||||||||||||||||  | |  |||||||| ||| ||||||||||||    
T  45712977 ctttgaggaaatcatggtgaatttagttaagaaaaaaaaaaaaagcacctaaggaattgtaccta 45712913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 10017167 - 10017210
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  10017167 aaatacatattttttggatataacaaactttgaaaaaattatgg 10017210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 21969275 - 21969318
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  21969275 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21969318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 21991711 - 21991754
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  21991711 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 21991754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 36329298 - 36329337
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  36329298 tttagttaagaaccatacgaaaagcacctaaagaattgta 36329337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 36657551 - 36657508
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  36657551 aaatacatatttttttgatataacaaactttgagaaaattatgg 36657508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 36822878 - 36822921
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| |||| |||||||||||    
T  36822878 tttagttaagaaccatacgaaaagcacctaaaaaattgtaccta 36822921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 44920719 - 44920661
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    |||||||||||||| || |||||||||||||| |||| ||||||||| ||| ||||||||    
T  44920719 tttgagaaaatcattgtaaatttagttaagaaccataagaaaagcac-taaggaattgta 44920661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 45487852 - 45487809
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||    
T  45487852 tttagttaagaaccatacgaaaagcacctaaggaattgtaccta 45487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 45713021 - 45712978
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  45713021 aaatacatattttttggatataacaaactttgataaaattatgg 45712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 581
Target Start/End: Complemental strand, 46222097 - 46222042
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||||||||||||||||||||||| || |||||||||| ||| |||  |||||||    
T  46222097 agaaaatcatggtgaatttagttaaaaaccatacgaaaaacacctaagaaattgta 46222042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 4072382 - 4072348
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  4072382 ttttttggatataacaaactttgagaaaattatgg 4072348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 12789659 - 12789697
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  12789659 aaatacatattttttggatataacaaactttgaaaaaat 12789697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 25446312 - 25446346
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  25446312 ttttttggatataacaaactttgagaaaattatgg 25446346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Original strand, 35368795 - 35368829
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  35368795 ttttttggatataacaaactttgagaaaattatgg 35368829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 44920764 - 44920726
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  44920764 aaatacatattttttggatataataaactttgagaaaat 44920726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 532
Target Start/End: Original strand, 50099491 - 50099525
Alignment:
Q  498 atatattttttggatataacaaactttgagaaaat 532  Q
    |||| ||||||||||||||||||||||||||||||    
T  50099491 atattttttttggatataacaaactttgagaaaat 50099525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 537
Target Start/End: Complemental strand, 55340402 - 55340368
Alignment:
Q  503 ttttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||||||||||||||||||||||| ||||    
T  55340402 ttttttggatataacaaactttgagaaaattatgg 55340368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Original strand, 404107 - 404136
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  404107 ttttttggatataacaaactttgagaaaat 404136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 532
Target Start/End: Complemental strand, 13724096 - 13724067
Alignment:
Q  503 ttttttggatataacaaactttgagaaaat 532  Q
    ||||||||||||||||||||||||||||||    
T  13724096 ttttttggatataacaaactttgagaaaat 13724067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 585
Target Start/End: Complemental strand, 36822831 - 36822770
Alignment:
Q  524 tgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||| ||||||||||   |||||||||||| |||||||||||||  ||| ||||||||||||    
T  36822831 tgaggaaatcatggtatttttagttaagaaccatacgaaaagcagctaaggaattgtaccta 36822770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 44611447 - 44611394
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||||||||||||||||  |||| ||||| || ||| |||||||||    
T  44611447 aaatcatggtgaatttagttaagaactatacaaaaagtacctaaggaattgtac 44611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 10441311 - 10441271
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtac 582  Q
    |||||||||||||||||| |||||||| ||| |||||||||    
T  10441311 tttagttaagaatcataccaaaagcacctaaggaattgtac 10441271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 13724053 - 13723998
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||| |||||| ||||| |||||||| |||  |||||||||||    
T  13724053 aaatcatggtgaatttag-taagaaccatacaaaaagcacctaagaaattgtaccta 13723998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 22101217 - 22101261
Alignment:
Q  494 aaatatatatttt-ttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||    
T  22101217 aaatacatattttgttggatataacaaactttgagaaaattatgg 22101261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 595
Target Start/End: Original strand, 46664299 - 46664347
Alignment:
Q  547 ttaagaatcatacgaaaagcacataaagaattgtacctatgcttctcct 595  Q
    |||| ||||||||||||||||| ||||||||||||| || | |||||||    
T  46664299 ttaaaaatcatacgaaaagcacctaaagaattgtacataagtttctcct 46664347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 524 - 585
Target Start/End: Original strand, 10215 - 10276
Alignment:
Q  524 tgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||    
T  10215 tgagaaaatcatggtgaatttacttaagaattatacgaaaagcacataagaaattgtaccta 10276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 10169 - 10211
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  10169 aaatatatatttt-tggatataacaaactttgagaaaattatgg 10211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 586
Target Start/End: Complemental strand, 138346 - 138286
Alignment:
Q  526 agaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtacctat 586  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  138346 agaaaatcatgatgaatttagttaagaatcatacgaaaagctcctaaggaattgtacctat 138286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 3703 - 3639
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatggtgaatttagttaagaatcata 558  Q
    |||||| ||||||||  |||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  3703 aaatatttattttttttatataacaaactatgagaaaattatgatgaatttagttaagaatcata 3639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Original strand, 7184 - 7247
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  7184 tttgaggaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaatcgtaccta 7247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 7139 - 7182
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  7139 aaatatatatattttggatataacaaactttgagaaaattatgg 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 7139 - 7096
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||    
T  7139 tttagttaagaatcatacgaaaaacacctaaggaattgtaccta 7096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 2012 - 1949
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||| |||| |||| ||||||    
T  2012 tttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaacaattataccta 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 581
Target Start/End: Original strand, 48224 - 48283
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgta 581  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||  ||| ||||||||    
T  48224 tttgagaaaatcatggtgaatttagttaagaactatacgaaaagcatctaaggaattgta 48283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 48179 - 48222
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaatcatgg 537  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  48179 aaatacatattttttggatataacaaactttgagaaaattatgg 48222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 5803 - 5849
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcac 568  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5803 tttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcac 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 584
Target Start/End: Complemental strand, 5754 - 5712
Alignment:
Q  542 tttagttaagaatcatacgaaaagcacataaagaattgtacct 584  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  5754 tttagttaagaaccatacgaaaagcacctaaagaattgtacct 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 532
Target Start/End: Original strand, 51116 - 51154
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51116 aaatatatattttttggatataacaaactttgagaaaat 51154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 51168 - 51224
Alignment:
Q  529 aaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||| ||||||||||||||||| |||| |||||| || ||| ||||||||||||    
T  51168 aaatcatagtgaatttagttaagaaccatatgaaaagtacctaaggaattgtaccta 51224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 585
Target Start/End: Complemental strand, 3466 - 3403
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    |||||| ||||||||||||||||| ||||||| ||||| ||||||||  || ||||||||||||    
T  3466 tttgaggaaatcatggtgaatttaattaagaaccatacaaaaagcaccaaatgaattgtaccta 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 3511 - 3473
Alignment:
Q  494 aaatatatattttttggatataacaaactttgagaaaat 532  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  3511 aaatacatattttttggatataacaaactttgataaaat 3473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 585
Target Start/End: Original strand, 14552 - 14603
Alignment:
Q  534 atggtgaatttagttaagaatcatacgaaaagcacataaagaattgtaccta 585  Q
    ||||||||||||||||||||  |||||||||||||  || ||||||||||||    
T  14552 atggtgaatttagttaagaacgatacgaaaagcacccaaggaattgtaccta 14603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 558
Target Start/End: Original strand, 94270 - 94306
Alignment:
Q  522 tttgagaaaatcatggtgaatttagttaagaatcata 558  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  94270 tttgataaaatcatggtgaatttagttaagaaccata 94306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University