View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9445_7 (Length: 524)
Name: NF9445_7
Description: NF9445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9445_7 |
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Alignment Details
Target: chr6 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 28 - 495
Target Start/End: Complemental strand, 35171898 - 35171430
Alignment:
| Q |
28 |
atcacaggttgtggaaagtaaaaaaggatgataatgttcaataaatga-ctactgtatgtatgtaggagagtatctagcagcagcaagactcaaaaactt |
126 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171898 |
atcacaggttgtggaaagtaaaaaaggatgataatgttaaataaatgaactactgtatgtatgtaggagagtatctagcagcagcaagactcaaaaactt |
35171799 |
T |
|
| Q |
127 |
acaaatagacatgtatatatgttagtatgtagaatattaatacctgtaattgatgcatcatgttttcctgtttgatttcaatatctgaaagttgattccg |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171798 |
acaaatagacatgtatatatgttagtatgtagaatattaatacctgtaattgatgcatcatgttttcctgtttgatttcaatatctgaaagttgattccg |
35171699 |
T |
|
| Q |
227 |
aatacatgtcatttcatttgccctttgtaaacaacattgatgtataatttggggacttgattcggtgactgtagaatcagaacttttaggatcctgcatc |
326 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171698 |
aatacaagtcatttcatttgccctttgtaaacaacattgatgtgtaatttggggacttgattcggtgactgtagaatcagaacttttaggatcctgcatc |
35171599 |
T |
|
| Q |
327 |
tttatggagtacatttgttcattgcagcttattccttcacctaaccgttggcttctcccatttggcttctgtggtccattgtttacaaagcagtcatggg |
426 |
Q |
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|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171598 |
tttatggagtcaatttgttcattgcagcttattccttcatctaaccgttggcttctcccatttggcttctgtggtccattgtttacaaagcagtcatggg |
35171499 |
T |
|
| Q |
427 |
aagttaaaaacttggtttcgtagttagaaacagaagagcactcctgcttatcatccataggcccatatt |
495 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171498 |
aagttaaaaacttggtttcgtagttagaaacagaagagcactcctgcttatcatccataggcccatatt |
35171430 |
T |
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