View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9446_low_26 (Length: 238)
Name: NF9446_low_26
Description: NF9446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9446_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 14472452 - 14472673
Alignment:
| Q |
1 |
acaaaacaacataaacataacaaaaacgttaattttgagacagaaacaacattgatgaatcattacccctttgccaaatccaaaaattccatgaaccaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14472452 |
acaaaacaacataaacataacaaaaacgttaattttgagacagaaacaacattgatgaatcattacccctttgccaaatccaaaaattccatgaaccaaa |
14472551 |
T |
|
| Q |
101 |
acaataggaggaagatcattatcaaattttgaatctttttcatcaattttcaaattctcttgaaccacaacatcattcttcatcttatccttttgaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
14472552 |
acaataggaggaagatcattatcaaattttgaatctttttcatcaattttcaaattctcttgaaccacaacatcattcttcatcttatccttttgaaaat |
14472651 |
T |
|
| Q |
201 |
attcattaacaacaattgatag |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
14472652 |
attcattaacaacaattgatag |
14472673 |
T |
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