View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9447_low_15 (Length: 250)
Name: NF9447_low_15
Description: NF9447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9447_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 42500232 - 42500473
Alignment:
| Q |
1 |
aattgattctgaacataaatagcaccaagttcttcaattaggttacttggttattcattaataactaaaacttagcaaaacttgattgacctaaattgta |
100 |
Q |
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| T |
42500232 |
aattgattctgaacataaatagcaccaagttcttcaattaggttacttggttattcattaataactaaaacttagcaaaacttgattgatctaaattgta |
42500331 |
T |
|
| Q |
101 |
cctttcttgcccttattttgcttaagctacgttcaagttgattttcaatctgttgtaattcgtcaaaagcacatgaacccaattcgtctcccaacagctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
42500332 |
cctttcttgcccttattttgcttaagctacgttcaagttgattttcaatctgttgtaattcgtcaaaagcacatgaacccaattcttctcccaacagctt |
42500431 |
T |
|
| Q |
201 |
cctacaatacatgaaaatatccaatagatcatgagtataatc |
242 |
Q |
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|||||||||||||||||||||||||||| |||||| |||||| |
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| T |
42500432 |
cctacaatacatgaaaatatccaatagaacatgagaataatc |
42500473 |
T |
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