View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9447_low_4 (Length: 541)

Name: NF9447_low_4
Description: NF9447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9447_low_4
NF9447_low_4
[»] chr4 (54 HSPs)
chr4 (90-317)||(8082946-8083177)
chr4 (79-274)||(24490022-24490219)
chr4 (84-263)||(653045-653224)
chr4 (118-296)||(10120758-10120935)
chr4 (79-317)||(10318687-10318928)
chr4 (82-275)||(34644547-34644741)
chr4 (161-263)||(8980277-8980378)
chr4 (161-263)||(8985397-8985498)
chr4 (161-263)||(13700512-13700613)
chr4 (161-263)||(21299825-21299926)
chr4 (161-263)||(21304945-21305046)
chr4 (161-263)||(54991488-54991589)
chr4 (15-83)||(24490250-24490318)
chr4 (161-263)||(41393247-41393348)
chr4 (161-263)||(51019365-51019466)
chr4 (161-263)||(53797631-53797732)
chr4 (161-263)||(36354178-36354279)
chr4 (161-263)||(36359296-36359397)
chr4 (161-263)||(39999071-39999172)
chr4 (161-263)||(40004029-40004130)
chr4 (161-263)||(54348359-54348460)
chr4 (154-265)||(30564399-30564510)
chr4 (161-276)||(47046299-47046413)
chr4 (161-263)||(13695161-13695262)
chr4 (161-251)||(13710682-13710771)
chr4 (169-263)||(37259877-37259971)
chr4 (161-263)||(54343205-54343306)
chr4 (15-83)||(10120390-10120459)
chr4 (169-263)||(5271419-5271513)
chr4 (169-263)||(13521992-13522086)
chr4 (169-263)||(31273522-31273616)
chr4 (15-83)||(10120618-10120687)
chr4 (169-263)||(12823895-12823989)
chr4 (169-266)||(19101975-19102072)
chr4 (190-275)||(39319621-39319706)
chr4 (161-213)||(9764013-9764065)
chr4 (163-250)||(17359546-17359633)
chr4 (169-263)||(8693712-8693806)
chr4 (169-263)||(16421030-16421124)
chr4 (169-263)||(31269035-31269129)
chr4 (169-263)||(33463356-33463450)
chr4 (169-263)||(37264564-37264658)
chr4 (169-263)||(55251721-55251814)
chr4 (15-52)||(653290-653327)
chr4 (168-253)||(31298384-31298468)
chr4 (169-263)||(5928219-5928313)
chr4 (169-263)||(31765887-31765981)
chr4 (169-263)||(47244249-47244343)
chr4 (26-79)||(10318598-10318651)
chr4 (169-213)||(4551048-4551092)
chr4 (169-213)||(8030476-8030520)
chr4 (169-213)||(19906302-19906346)
chr4 (169-253)||(31729387-31729471)
chr4 (169-213)||(51697968-51698012)
[»] chr3 (59 HSPs)
chr3 (105-317)||(26962007-26962217)
chr3 (80-303)||(33089253-33089476)
chr3 (80-281)||(13022011-13022212)
chr3 (132-288)||(53119504-53119659)
chr3 (80-288)||(20810349-20810557)
chr3 (132-282)||(38436954-38437103)
chr3 (443-524)||(3448540-3448621)
chr3 (105-311)||(21494239-21494445)
chr3 (168-251)||(2617255-2617338)
chr3 (161-276)||(3476938-3477052)
chr3 (161-263)||(17368721-17368822)
chr3 (15-77)||(20810596-20810658)
chr3 (161-263)||(17364065-17364168)
chr3 (9-83)||(53119745-53119820)
chr3 (168-263)||(54270646-54270740)
chr3 (161-263)||(3482415-3482516)
chr3 (161-263)||(4117592-4117693)
chr3 (161-263)||(34129161-34129262)
chr3 (161-263)||(20090654-20090755)
chr3 (161-263)||(20095779-20095880)
chr3 (161-263)||(17357838-17357941)
chr3 (171-233)||(26706815-26706877)
chr3 (161-263)||(55128792-55128893)
chr3 (15-83)||(33089152-33089221)
chr3 (169-261)||(12112641-12112733)
chr3 (161-263)||(15763022-15763123)
chr3 (161-263)||(15768183-15768284)
chr3 (167-263)||(27605133-27605229)
chr3 (169-263)||(8069679-8069772)
chr3 (163-216)||(795399-795452)
chr3 (171-266)||(1688888-1688983)
chr3 (169-263)||(758368-758462)
chr3 (79-190)||(6025231-6025343)
chr3 (169-263)||(7571218-7571312)
chr3 (169-263)||(8883169-8883263)
chr3 (163-273)||(10586177-10586286)
chr3 (169-263)||(23666123-23666217)
chr3 (169-263)||(24038371-24038465)
chr3 (169-263)||(39775728-39775822)
chr3 (169-263)||(49971424-49971518)
chr3 (161-263)||(10321444-10321546)
chr3 (169-263)||(3672585-3672679)
chr3 (169-263)||(3692617-3692711)
chr3 (169-263)||(8887929-8888023)
chr3 (169-263)||(14438695-14438789)
chr3 (169-263)||(18467224-18467318)
chr3 (169-263)||(20520053-20520147)
chr3 (174-216)||(25023929-25023971)
chr3 (161-263)||(30341836-30341937)
chr3 (15-52)||(13022274-13022311)
chr3 (26-83)||(26928823-26928880)
chr3 (169-213)||(12965873-12965917)
chr3 (169-216)||(1741109-1741156)
chr3 (15-74)||(38436767-38436826)
chr3 (171-213)||(16013759-16013801)
chr3 (169-210)||(27708988-27709029)
chr3 (169-213)||(18472056-18472100)
chr3 (169-213)||(23661464-23661508)
chr3 (169-213)||(32474680-32474724)
[»] chr6 (41 HSPs)
chr6 (79-317)||(3901859-3902100)
chr6 (79-319)||(17281471-17281713)
chr6 (80-300)||(13605002-13605222)
chr6 (80-303)||(19478110-19478333)
chr6 (79-317)||(29325482-29325723)
chr6 (105-303)||(31495778-31495974)
chr6 (105-303)||(31501164-31501360)
chr6 (79-263)||(12182908-12183094)
chr6 (238-319)||(17290131-17290212)
chr6 (163-275)||(10642699-10642811)
chr6 (105-303)||(31515668-31515864)
chr6 (147-303)||(31475993-31476148)
chr6 (161-263)||(21396701-21396802)
chr6 (161-263)||(24192472-24192573)
chr6 (161-263)||(29491229-29491330)
chr6 (161-263)||(34142082-34142183)
chr6 (161-263)||(34154698-34154799)
chr6 (161-263)||(22698235-22698336)
chr6 (168-263)||(5600971-5601066)
chr6 (161-276)||(31981549-31981663)
chr6 (158-284)||(5740779-5740905)
chr6 (161-263)||(22703358-22703459)
chr6 (161-263)||(24191375-24191476)
chr6 (82-253)||(22713706-22713878)
chr6 (169-263)||(2700106-2700200)
chr6 (15-69)||(13604911-13604965)
chr6 (161-263)||(34375921-34376022)
chr6 (15-84)||(19478364-19478434)
chr6 (169-263)||(24589164-24589258)
chr6 (26-83)||(3902131-3902188)
chr6 (18-73)||(17281377-17281430)
chr6 (175-263)||(21401757-21401844)
chr6 (26-74)||(29325763-29325811)
chr6 (169-244)||(17964559-17964634)
chr6 (26-83)||(3902489-3902546)
chr6 (161-213)||(2818139-2818191)
chr6 (29-83)||(10642927-10642981)
chr6 (169-263)||(11570749-11570843)
chr6 (169-213)||(11614092-11614136)
chr6 (26-74)||(14073671-14073719)
chr6 (169-253)||(33687603-33687687)
[»] chr2 (33 HSPs)
chr2 (80-303)||(42914604-42914827)
chr2 (81-282)||(5089261-5089462)
chr2 (15-83)||(42914859-42914928)
chr2 (161-263)||(42723443-42723544)
chr2 (161-263)||(42728612-42728713)
chr2 (161-263)||(44096304-44096405)
chr2 (161-263)||(44754588-44754689)
chr2 (161-263)||(44759754-44759855)
chr2 (169-263)||(30658264-30658358)
chr2 (161-263)||(40518464-40518565)
chr2 (192-273)||(19538377-19538458)
chr2 (163-251)||(11658882-11658970)
chr2 (15-74)||(5089505-5089564)
chr2 (169-263)||(1934993-1935087)
chr2 (169-263)||(9180724-9180818)
chr2 (161-263)||(28751721-28751822)
chr2 (167-242)||(28945191-28945266)
chr2 (169-263)||(9189803-9189897)
chr2 (169-263)||(10160724-10160818)
chr2 (169-263)||(19892466-19892560)
chr2 (163-220)||(17327451-17327508)
chr2 (169-261)||(35601925-35602017)
chr2 (164-244)||(40392340-40392419)
chr2 (163-273)||(39542893-39543004)
chr2 (169-263)||(25497325-25497419)
chr2 (192-273)||(28854996-28855077)
chr2 (169-273)||(6297886-6297989)
chr2 (169-213)||(7737851-7737895)
chr2 (193-244)||(44683171-44683222)
chr2 (169-263)||(18344432-18344526)
chr2 (169-263)||(30631580-30631674)
chr2 (169-263)||(30650930-30651024)
chr2 (173-213)||(42926763-42926803)
[»] chr8 (37 HSPs)
chr8 (80-288)||(19429991-19430199)
chr8 (80-288)||(19435493-19435701)
chr8 (80-288)||(19566140-19566348)
chr8 (80-288)||(19571642-19571850)
chr8 (82-288)||(33616638-33616845)
chr8 (80-282)||(31030511-31030714)
chr8 (132-261)||(13584354-13584490)
chr8 (15-83)||(13584517-13584586)
chr8 (15-83)||(31030746-31030815)
chr8 (161-261)||(21644073-21644172)
chr8 (163-263)||(42514368-42514467)
chr8 (19-74)||(33616539-33616594)
chr8 (161-263)||(17955781-17955882)
chr8 (161-263)||(32015702-32015803)
chr8 (169-263)||(31449866-31449960)
chr8 (169-263)||(38182237-38182331)
chr8 (161-263)||(43999222-43999323)
chr8 (169-263)||(44925923-44926017)
chr8 (161-263)||(24884714-24884816)
chr8 (169-263)||(17025936-17026030)
chr8 (169-263)||(17556428-17556522)
chr8 (169-263)||(18876367-18876460)
chr8 (169-263)||(33416548-33416642)
chr8 (169-266)||(1910969-1911066)
chr8 (15-52)||(19430261-19430298)
chr8 (15-52)||(19435763-19435800)
chr8 (15-52)||(19566410-19566447)
chr8 (15-52)||(19571912-19571949)
chr8 (171-263)||(1807473-1807565)
chr8 (169-213)||(43302718-43302762)
chr8 (29-80)||(21827452-21827503)
chr8 (169-259)||(15875668-15875758)
chr8 (169-263)||(19166635-19166729)
chr8 (169-263)||(36683580-36683674)
chr8 (169-263)||(40125885-40125979)
chr8 (164-201)||(15150311-15150348)
chr8 (163-263)||(37771713-37771812)
[»] chr7 (39 HSPs)
chr7 (80-300)||(9973427-9973647)
chr7 (132-288)||(28292467-28292620)
chr7 (80-288)||(24528331-24528540)
chr7 (132-283)||(33226396-33226546)
chr7 (161-263)||(12934399-12934500)
chr7 (161-263)||(16539404-16539505)
chr7 (161-263)||(16626157-16626258)
chr7 (161-263)||(42571947-42572048)
chr7 (15-83)||(28292312-28292381)
chr7 (15-74)||(24528582-24528641)
chr7 (15-83)||(9973679-9973748)
chr7 (161-263)||(33238004-33238105)
chr7 (161-263)||(47998977-47999078)
chr7 (161-263)||(21081031-21081134)
chr7 (161-276)||(47177111-47177225)
chr7 (161-263)||(2234622-2234723)
chr7 (161-263)||(17495405-17495506)
chr7 (161-263)||(17557708-17557809)
chr7 (161-263)||(32212646-32212747)
chr7 (161-253)||(19309603-19309694)
chr7 (161-263)||(33243181-33243282)
chr7 (161-263)||(47993802-47993903)
chr7 (161-276)||(43892847-43892961)
chr7 (169-263)||(9650967-9651061)
chr7 (169-263)||(23866069-23866163)
chr7 (169-263)||(26341200-26341294)
chr7 (169-263)||(4579509-4579603)
chr7 (163-273)||(27256234-27256343)
chr7 (15-74)||(33226577-33226633)
chr7 (26-83)||(47761841-47761898)
chr7 (169-263)||(8076051-8076145)
chr7 (169-263)||(23246933-23247027)
chr7 (169-263)||(44510677-44510771)
chr7 (169-263)||(4930234-4930328)
chr7 (163-225)||(7875088-7875150)
chr7 (26-83)||(19096780-19096838)
chr7 (29-74)||(14928149-14928194)
chr7 (29-74)||(15351615-15351660)
chr7 (167-216)||(19640347-19640395)
[»] chr5 (50 HSPs)
chr5 (84-263)||(13582604-13582783)
chr5 (84-263)||(24435783-24435962)
chr5 (82-263)||(7805073-7805254)
chr5 (82-273)||(14374127-14374318)
chr5 (161-263)||(36253828-36253929)
chr5 (161-263)||(17510060-17510161)
chr5 (161-263)||(24771349-24771450)
chr5 (161-263)||(42019575-42019676)
chr5 (161-263)||(17504955-17505056)
chr5 (161-263)||(41858595-41858696)
chr5 (161-263)||(26709104-26709207)
chr5 (161-263)||(26978838-26978941)
chr5 (169-268)||(41587160-41587259)
chr5 (169-263)||(37248795-37248889)
chr5 (15-74)||(24435679-24435738)
chr5 (161-263)||(24776804-24776908)
chr5 (169-275)||(28857851-28857958)
chr5 (169-263)||(1414051-1414144)
chr5 (169-263)||(7451759-7451853)
chr5 (165-263)||(13301482-13301579)
chr5 (163-273)||(21323960-21324069)
chr5 (169-263)||(26667273-26667367)
chr5 (169-263)||(26938870-26938964)
chr5 (169-263)||(29167973-29168067)
chr5 (169-263)||(32461549-32461643)
chr5 (169-263)||(39523050-39523144)
chr5 (161-263)||(41853550-41853651)
chr5 (169-263)||(42001435-42001529)
chr5 (169-263)||(556696-556790)
chr5 (169-263)||(561468-561562)
chr5 (169-263)||(12045139-12045233)
chr5 (169-259)||(12103030-12103120)
chr5 (169-263)||(12501899-12501993)
chr5 (163-273)||(31731535-31731644)
chr5 (169-263)||(31986728-31986822)
chr5 (169-263)||(36423638-36423732)
chr5 (169-263)||(36428710-36428804)
chr5 (169-263)||(36937511-36937605)
chr5 (169-263)||(36942265-36942359)
chr5 (169-263)||(41996666-41996760)
chr5 (15-52)||(7805317-7805354)
chr5 (15-52)||(13582501-13582538)
chr5 (15-52)||(14374381-14374418)
chr5 (168-216)||(9077037-9077085)
chr5 (169-253)||(35679875-35679959)
chr5 (169-263)||(3665933-3666027)
chr5 (169-263)||(6155419-6155513)
chr5 (171-213)||(40147946-40147988)
chr5 (169-213)||(10759820-10759864)
chr5 (24-80)||(36424193-36424249)
[»] scaffold0011 (4 HSPs)
scaffold0011 (132-282)||(1548-1697)
scaffold0011 (132-288)||(7023-7178)
scaffold0011 (15-83)||(7264-7333)
scaffold0011 (15-83)||(1783-1852)
[»] chr1 (42 HSPs)
chr1 (80-303)||(5602335-5602558)
chr1 (133-288)||(38734252-38734406)
chr1 (82-273)||(10106095-10106286)
chr1 (80-273)||(13890805-13890998)
chr1 (80-283)||(26651076-26651279)
chr1 (80-282)||(14582082-14582284)
chr1 (159-300)||(39747155-39747295)
chr1 (161-263)||(11251105-11251206)
chr1 (161-263)||(37404408-37404509)
chr1 (161-263)||(37409529-37409630)
chr1 (161-263)||(36684707-36684808)
chr1 (161-263)||(3584603-3584704)
chr1 (161-263)||(5724981-5725082)
chr1 (80-300)||(19422784-19423008)
chr1 (161-263)||(27716445-27716546)
chr1 (15-83)||(19422683-19422752)
chr1 (169-263)||(19799013-19799107)
chr1 (161-243)||(48246675-48246756)
chr1 (164-263)||(34318219-34318317)
chr1 (15-74)||(39747092-39747148)
chr1 (161-263)||(5730107-5730208)
chr1 (169-263)||(16035609-16035703)
chr1 (169-263)||(16649613-16649706)
chr1 (163-273)||(41097946-41098055)
chr1 (169-263)||(47455386-47455480)
chr1 (15-83)||(14582316-14582385)
chr1 (169-261)||(33301180-33301272)
chr1 (15-52)||(13891060-13891097)
chr1 (137-233)||(25188240-25188336)
chr1 (163-216)||(33055087-33055139)
chr1 (15-52)||(38734522-38734559)
chr1 (472-524)||(16979596-16979648)
chr1 (180-263)||(11387841-11387923)
chr1 (143-216)||(14724296-14724370)
chr1 (169-263)||(10135457-10135551)
chr1 (169-263)||(10140090-10140184)
chr1 (169-263)||(23192817-23192911)
chr1 (172-266)||(39588370-39588464)
chr1 (169-263)||(40165981-40166075)
chr1 (169-263)||(47451225-47451319)
chr1 (15-52)||(10106349-10106386)
chr1 (26-67)||(17213954-17213995)
[»] scaffold0132 (2 HSPs)
scaffold0132 (132-303)||(2735-2905)
scaffold0132 (132-303)||(10695-10865)
[»] scaffold0067 (2 HSPs)
scaffold0067 (79-318)||(33876-34119)
scaffold0067 (26-83)||(33788-33845)
[»] scaffold0166 (2 HSPs)
scaffold0166 (161-276)||(13732-13846)
scaffold0166 (161-263)||(19187-19291)
[»] scaffold0014 (2 HSPs)
scaffold0014 (161-263)||(31547-31648)
scaffold0014 (164-213)||(26424-26473)
[»] scaffold0594 (1 HSPs)
scaffold0594 (161-263)||(9200-9301)
[»] scaffold0517 (1 HSPs)
scaffold0517 (161-263)||(3565-3666)
[»] scaffold0060 (3 HSPs)
scaffold0060 (161-263)||(37012-37113)
scaffold0060 (163-273)||(52894-53003)
scaffold0060 (163-273)||(47851-47960)
[»] scaffold0055 (1 HSPs)
scaffold0055 (161-263)||(3060-3161)
[»] scaffold0052 (1 HSPs)
scaffold0052 (161-263)||(81374-81475)
[»] scaffold0002 (1 HSPs)
scaffold0002 (169-263)||(4075-4169)
[»] scaffold0352 (1 HSPs)
scaffold0352 (169-263)||(7105-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (169-263)||(9887-9981)
[»] scaffold0061 (1 HSPs)
scaffold0061 (163-273)||(45776-45885)
[»] scaffold0017 (1 HSPs)
scaffold0017 (163-273)||(152902-153011)
[»] scaffold1910 (1 HSPs)
scaffold1910 (26-86)||(389-450)
[»] scaffold0020 (1 HSPs)
scaffold0020 (163-263)||(1220-1319)
[»] scaffold0205 (1 HSPs)
scaffold0205 (29-80)||(30797-30848)
[»] scaffold0019 (1 HSPs)
scaffold0019 (29-80)||(30214-30265)
[»] scaffold0012 (1 HSPs)
scaffold0012 (169-263)||(166086-166180)
[»] scaffold0057 (1 HSPs)
scaffold0057 (169-213)||(35685-35729)
[»] scaffold0054 (1 HSPs)
scaffold0054 (169-213)||(25450-25494)
[»] scaffold0015 (1 HSPs)
scaffold0015 (26-74)||(193777-193825)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 9e-62; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 90 - 317
Target Start/End: Original strand, 8082946 - 8083177
Alignment:
Q  90 aacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcgg 187  Q
    |||||| ||||||||||  ||| |||||||||||||||| ||||||| |||||| ||| ||||||||||| ||||||||||||||||||| |||||||||    
T  8082946 aacgatcaagccatattttgaggtgtatattctcgagcgattacatattgtgcagtacgtaatcgtaacagtgatctgggctgttttatcttggaggcgg 8083045  T
Q  188 cgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagt 287  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||| || ||||||| ||||||||  |||||||||||  |||||||| |||||||| |    
T  8083046 cgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgacttaactcggtaatttctttggtatt 8083145  T
Q  288 ag-ttctgattttt-aaaacacgaaaacaaca 317  Q
    || ||||||||||| |||||||||||||||||    
T  8083146 agtttctgatttttaaaaacacgaaaacaaca 8083177  T

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Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 79 - 274
Target Start/End: Complemental strand, 24490219 - 24490022
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttat 176  Q
    |||||||||| ||| |||||||||||||  ||| |||||||||||||||  ||| |||  ||||| ||| ||||||||| | |||| |||||||||||||    
T  24490219 ggttttaatcaaactattaagccatattttgaggtgtatattctcgagcaattatataacgtgcagtacgtaatcgtaatagtgatatgggctgttttat 24490120  T
Q  177 cctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaa 274  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||| || ||||||| ||||| || ||||||||| || |||||||    
T  24490119 cctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacccggtaa 24490022  T

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Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 84 - 263
Target Start/End: Complemental strand, 653224 - 653045
Alignment:
Q  84 taatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctgga 182  Q
    ||||||||||||||| | ||||| ||| |||||||   |||||| ||  |||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  653224 taatcgaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctgga 653125  T
Q  183 ggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    | ||||| ||||||||||||| |||||||||| |||  ||||||||||||| || ||||||| |||||||| |||||||||    
T  653124 gacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 653045  T

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Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 118 - 296
Target Start/End: Original strand, 10120758 - 10120935
Alignment:
Q  118 tctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaactt 217  Q
    ||||||||| ||  |||||||||| |  |||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||| |||||    
T  10120758 tctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggctattttatcctggagacggcgtggttgttagtctaccttgcac-aactt 10120856  T
Q  218 gaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgat 296  Q
    |  ||||||||||||| || ||||||| ||||||||  |||||||| || | |||||||||||||  |||| |||||||    
T  10120857 gggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacctggtaattcctttgacagtacttctgat 10120935  T

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Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 79 - 317
Target Start/End: Original strand, 10318687 - 10318928
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt---gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgtttta 175  Q
    ||||||||||||| |||| |||||||||   ||| |||||||| |||| |  ||| ||| |||||| ||| |||| | || | |||| || | |||| ||    
T  10318687 ggttttaatcgaatgattgagccatatttttgaggtgtatattttcgaacaattaaatattgtgcagtacgtaattg-aatagtgatatgagttgttcta 10318785  T
Q  176 tcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||    |||||||||| ||||||| |||||| | ||||||||| || ||||||||    
T  10318786 tcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaacccggtaat 10318885  T
Q  276 tcctttggtagtag-ttctgatttttaaaacacgaaaacaaca 317  Q
    | ||| | |||||| || |||||||||||||||||||| ||||    
T  10318886 ttcttcgatagtagtttttgatttttaaaacacgaaaataaca 10318928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 82 - 275
Target Start/End: Complemental strand, 34644741 - 34644547
Alignment:
Q  82 tttaatcgaacgattaagccatattgagt-tgtatattctcgagcgtttacatactgtgcactacataatcgtaacat-tgatctgggctgttttatcct 179  Q
    ||||||||||||||||| ||||||||||  |||   ||||||| || |||| ||| ||||| ||| |||||| ||||  ||| ||| |||||||||||||    
T  34644741 tttaatcgaacgattaaaccatattgagggtgttatttctcgaacggttacttacggtgcagtacgtaatcg-aacaggtgagctgagctgttttatcct 34644643  T
Q  180 ggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    | ||||||||||||||||||| || ||| |||||||| | |||||| ||||||| || ||||||| |||||| |  |||||||| || ||||||||    
T  34644642 gtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaacccggtaat 34644547  T

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Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 8980277 - 8980378
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  8980277 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 8980375  T
Q  261 act 263  Q
    |||    
T  8980376 act 8980378  T

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Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 8985397 - 8985498
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  8985397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 8985495  T
Q  261 act 263  Q
    |||    
T  8985496 act 8985498  T

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Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 13700613 - 13700512
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  13700613 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 13700515  T
Q  261 act 263  Q
    |||    
T  13700514 act 13700512  T

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Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 21299825 - 21299926
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  21299825 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21299923  T
Q  261 act 263  Q
    |||    
T  21299924 act 21299926  T

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Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 21304945 - 21305046
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  21304945 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtg 21305043  T
Q  261 act 263  Q
    |||    
T  21305044 act 21305046  T

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Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 54991589 - 54991488
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  54991589 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 54991491  T
Q  261 act 263  Q
    |||    
T  54991490 act 54991488  T

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Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 24490318 - 24490250
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  24490318 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttatgtcccttcggttt 24490250  T

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Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 41393348 - 41393247
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  41393348 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 41393250  T
Q  261 act 263  Q
    |||    
T  41393249 act 41393247  T

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Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 51019365 - 51019466
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  51019365 atctgggatgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 51019463  T
Q  261 act 263  Q
    |||    
T  51019464 act 51019466  T

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Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 53797732 - 53797631
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  53797732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 53797634  T
Q  261 act 263  Q
    |||    
T  53797633 act 53797631  T

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Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 36354279 - 36354178
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  36354279 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 36354182  T
Q  260 gact 263  Q
    ||||    
T  36354181 gact 36354178  T

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Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 36359397 - 36359296
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  36359397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 36359300  T
Q  260 gact 263  Q
    ||||    
T  36359299 gact 36359296  T

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Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 39999172 - 39999071
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  39999172 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 39999075  T
Q  260 gact 263  Q
    ||||    
T  39999074 gact 39999071  T

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Target: chr4; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 40004130 - 40004029
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  40004130 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 40004033  T
Q  260 gact 263  Q
    ||||    
T  40004032 gact 40004029  T

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Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 54348460 - 54348359
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  54348460 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 54348363  T
Q  260 gact 263  Q
    ||||    
T  54348362 gact 54348359  T

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Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 30564399 - 30564510
Alignment:
Q  154 aacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    |||| ||| ||| ||||||||||||| |||||||| |  ||||||||||| |||||||||| |||  ||||||||||||| || ||| ||| ||||||||    
T  30564399 aacactgaactgagctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacct 30564498  T
Q  254 agtcgtgactta 265  Q
    |||||| |||||    
T  30564499 agtcgtaactta 30564510  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 47046299 - 47046413
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| | |||||| ||||||    
T  47046299 atctgagctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtg 47046397  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  47046398 actcaccccggtaatt 47046413  T

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Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 13695262 - 13695161
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    |||| |||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   |||||||||||||  | ||||||| |||||||| ||||||    
T  13695262 atctaggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtg 13695164  T
Q  261 act 263  Q
    |||    
T  13695163 act 13695161  T

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Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 13710771 - 13710682
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgac 251  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| ||||||    
T  13710771 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgac 13710682  T

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Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 37259877 - 37259971
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||| ||||||| ||||| || ||||||| |||||||| |||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgact 37259971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 54343306 - 54343205
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    |||||||||||||||||||| || ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  54343306 atctgggctgttttatcctgtagacggcgcggttgctagtctaccttgcacaat-tcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 54343208  T
Q  261 act 263  Q
    |||    
T  54343207 act 54343205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 10120390 - 10120459
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||    
T  10120390 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactactttctatccctttcggttt 10120459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 5271419 - 5271513
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 5271513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 13521992 - 13522086
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 13522086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 31273616 - 31273522
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 31273522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 10120618 - 10120687
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||    
T  10120618 tctctactcccttcgacttgtgttaacgagtcattcttctgcttctactactttctatccctttcggttt 10120687  T

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Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 12823895 - 12823989
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||  |||   |||||| |||||||| ||||||| |||||||| ||| |||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgact 12823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 19102072 - 19101975
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaa 266  Q
    |||||||||||||||||| || ||||| |||||| | ||||||||  |||| ||||||| ||||| || ||||| | || ||||| ||||||||||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgacttaa 19101975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 39319706 - 39319621
Alignment:
Q  190 cggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    |||||||||||||| |||||||||||| || ||||| || |||| || ||||||| ||||||||  |||||||| || ||||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaat 39319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 9764013 - 9764065
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||    
T  9764013 atctgggctgttttatcctagagacggtgcggttgttagtctaccttgcacaa 9764065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 17359633 - 17359546
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcga 250  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| |||| ||||||| |  |||||||| |||| || ||||||| |||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga 17359546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 8693806 - 8693712
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||| ||||||||| ||||| |||| | ||||||||||  |||  ||| ||| ||||| || ||||||| |||||||| |||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgact 8693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 16421124 - 16421030
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||| |||||||| ||||| ||||||  |||||||||  |||   |||||| |||||||| |||| || |||||||| |||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgact 16421030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 31269129 - 31269035
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||    |||||| ||||| || ||||||| |||||||| |||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 31269035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 33463356 - 33463450
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| |||||  | |||  |||||||||  ||| | |||||| ||||| || ||||||| |||||||| |||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 33463450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 37264564 - 37264658
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||| ||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 37264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 55251814 - 55251721
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||| |||| ||||| |||||| ||||||||||  ||| | |||||| ||||| || ||||| | |||||||| |||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgact 55251721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 653327 - 653290
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  653327 tctcttctcccttcgacttgtgttaacgagtcattctt 653290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 31298384 - 31298468
Alignment:
Q  168 ctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    ||||||||||||||||||| | | |||||||||||| |||||||||||| || ||||| |  |||| || ||||||| ||||||||    
T  31298384 ctgttttatcctggaggcg-cacagttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtcttaaagaaagcgacct 31298468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 5928219 - 5928313
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||| | ||||| ||||||  |||||||||  ||||  |||||| | |||  | ||||||| |||||||| |||||||||    
T  5928219 tgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtcgtgact 5928313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 31765981 - 31765887
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| || ||||| || ||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgact 31765887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 47244343 - 47244249
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||  | ||  ||||| |||||| ||||| || |||||||  |||||||  ||||||||    
T  47244343 tgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacgtcttaaagagggcgacctgatcgtgact 47244249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 10318598 - 10318651
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcg 79  Q
    ||||||||||||| | ||||| |||||||||||| ||| |||||||||| ||||    
T  10318598 ttcgacttgtgttgatgagtccttcttctgcttctactactttctgtcccttcg 10318651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 4551092 - 4551048
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    |||||||||||||||||||||  |||| |||||| ||||||||||    
T  4551092 tgttttatcctggaggcggcgtagttgatagtctgtcttgcacaa 4551048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 8030476 - 8030520
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||| |||  |||| |||||||||||||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaa 8030520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 19906346 - 19906302
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    |||||||||||||||||||||  |||| |||||| ||||||||||    
T  19906346 tgttttatcctggaggcggcggagttgatagtctgtcttgcacaa 19906302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 31729387 - 31729471
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    ||||||||||||||||||||| | ||| | ||||  |||||||||  |||  ||||||| ||||| || ||||||| ||||||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacct 31729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 51698012 - 51697968
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 51697968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 8e-50; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 105 - 317
Target Start/End: Complemental strand, 26962217 - 26962007
Alignment:
Q  105 ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctat 204  Q
    ||||| ||||||| |||||||| ||| ||| |||||| |  |||||||||||| ||||||| ||||||||||||||||| ||||| | |||||||||||     
T  26962217 ttgaggtgtatat-ctcgagcgattatatattgtgcagtgtataatcgtaacagtgatctgtgctgttttatcctggagacggcgtgtttgttagtctac 26962119  T
Q  205 cttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaaa 304  Q
    ||||||||| ||||  ||||||| ||||| || ||||||| ||||| || ||||||||| || || ||||||||||||||||||||||||||||||||||    
T  26962118 cttgcacaa-cttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacccagtaattcctttggtagtagttctgatttttaaaa 26962020  T
Q  305 cacgaaaacaaca 317  Q
    |||||||||||||    
T  26962019 cacgaaaacaaca 26962007  T

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Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 303
Target Start/End: Original strand, 33089253 - 33089476
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    |||||||||||||||||| || |||||  ||| ||||||| |||||||| ||  |||||||||| |  |||||||||||| ||||||| |||||||||||    
T  33089253 gttttaatcgaacgattaggctatatttagaggtgtatat-ctcgagcgattgtatactgtgcaatgtataatcgtaacagtgatctgagctgttttatc 33089351  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    || ||| ||||| ||||||||||||| ||||||| |||| |  ||||||||||||| || ||||||| |||||||| ||||||||| || ||||||||||    
T  33089352 ctagagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattc 33089450  T
Q  278 ctttggtagtagttctgatttttaaa 303  Q
    |||||| |||| || |||||| ||||    
T  33089451 ctttggcagtatttttgatttctaaa 33089476  T

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Target: chr3; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 80 - 281
Target Start/End: Complemental strand, 13022212 - 13022011
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||   ||||||||| || |||||||||||| ||||||||||||||||||||    
T  13022212 gttttaatcaaacgattaaacaatatttgaggtgtatatctacgagcgattgtgtactgtgcagtatataatcgtaacagtgatctgggctgttttatcc 13022113  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    ||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| |||||||| | |||||||| ||||||||| || ||| |||||||    
T  13022112 tggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacccgataattcc 13022014  T
Q  279 ttt 281  Q
    |||    
T  13022013 ttt 13022011  T

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Target: chr3; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 132 - 288
Target Start/End: Complemental strand, 53119659 - 53119504
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| || |||||||||||| |||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||| ||||||| |||||||||||    
T  53119659 atactgtgcagtatataatcgtaacagtgatctggcctgttttatcctagagacggcgtggttgttagtctaccttgcac-aacttgagtagtgccgcga 53119561  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagta 288  Q
    || || ||||||| ||||||||  |||||||| || |||||||||||||||| ||||    
T  53119560 aacgtcttaaagagagcgacctgatcgtgactcaacccggtaattcctttggcagta 53119504  T

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Target: chr3; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 20810557 - 20810349
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||||||||||||  | |||||  ||| ||||||| |||||||| ||  |||||||||| |  |||||||||||| ||||||| |||||||||||    
T  20810557 gttttaatcgaacgattagactatatttagaggtgtatat-ctcgagcgattgtatactgtgcagtgtataatcgtaacaatgatctgagctgttttatc 20810459  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||| |||| |  |||||| |||||| || ||||||| | |||||| ||||||||| || ||| ||||||    
T  20810458 ctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacccgataattc 20810360  T
Q  278 ctttggtagta 288  Q
    |||||||||||    
T  20810359 ctttggtagta 20810349  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 38436954 - 38437103
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||| |||||| |||||||| |||    
T  38436954 atactgtgcagtatataatcgtaacaatgatctgggctgttttatcctggagacggcgtggttgttagtctacctttcac-aacttggatagtgccacga 38437052  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttg 282  Q
    || || ||||||| || |||||  |||||||| || ||||||||| |||||    
T  38437053 aacgtcttaaagaaagtgacctgatcgtgactcaacccggtaatttctttg 38437103  T

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Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 443 - 524
Target Start/End: Complemental strand, 3448621 - 3448540
Alignment:
Q  443 tttatgcataagtacttctaaagtcttcaatattgttggttgtgatttggttacggtgtaaaactttttacattgacagtgt 524  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3448621 tttatgcataagtacttctaaagtcatcaatattgttggttgtgatttggttacagtgtaaaactttttacactgacagtgt 3448540  T

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Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 105 - 311
Target Start/End: Original strand, 21494239 - 21494445
Alignment:
Q  105 ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctat 204  Q
    ||||| ||||||||||||| |  |||||||||||||| ||| |||| | |||| ||| ||| |||||||||||| |||| |||||||||||||||||||     
T  21494239 ttgaggtgtatattctcgaacaattacatactgtgcaatacgtaattg-aacagtgaactgagctgttttatcccggagacggcgcggttgttagtctac 21494337  T
Q  205 cttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtag-ttctgatttttaaa 303  Q
    ||||||||||||||  || || || || |  | ||||||| |||||||| ||||||||| || || ||||| |||| |||||||| |||||| |||| ||    
T  21494338 cttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaatccagtaatcccttcggtagtagtttctgaatttttaa 21494437  T
Q  304 acacgaaa 311  Q
    | ||||||    
T  21494438 atacgaaa 21494445  T

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Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 2617255 - 2617338
Alignment:
Q  168 ctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgac 251  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| || ||||||| ||||||    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgac 2617338  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 3476938 - 3477052
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  3476938 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 3477036  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  3477037 actcaccccggtaatt 3477052  T

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Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17368822 - 17368721
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  17368822 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17368724  T
Q  261 act 263  Q
    |||    
T  17368723 act 17368721  T

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Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 20810658 - 20810596
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtccttt 77  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20810658 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtccttt 20810596  T

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Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17364168 - 17364065
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-aacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| || ||   ||||||||||||| || ||||||| |||||||| |||||    
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 17364069  T
Q  260 gact 263  Q
    ||||    
T  17364068 gact 17364065  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 53119820 - 53119745
Alignment:
Q  9 gattattctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  53119820 gattcttctcttctcccttcgacttgtgttaacgagtcgttcttctgcttctactcctttctgtccctttcggttt 53119745  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 54270740 - 54270646
Alignment:
Q  168 ctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||| |||||   |||||||||||||||| ||||||| |||||||| |||||||||    
T  54270740 ctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgact 54270646  T

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Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 3482415 - 3482516
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||   || |||||||||| || ||||||| |||||||| ||||||    
T  3482415 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaaa-ttaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtg 3482513  T
Q  261 act 263  Q
    |||    
T  3482514 act 3482516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 4117592 - 4117693
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||   |||||||||||||||| |||| || |||||||| ||||||    
T  4117592 atctgggctgttttatcctggagacagcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtg 4117690  T
Q  261 act 263  Q
    |||    
T  4117691 act 4117693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 34129161 - 34129262
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  34129161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 34129259  T
Q  261 act 263  Q
    |||    
T  34129260 act 34129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 20090654 - 20090755
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  20090654 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 20090751  T
Q  260 gact 263  Q
    ||||    
T  20090752 gact 20090755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 20095779 - 20095880
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  20095779 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 20095876  T
Q  260 gact 263  Q
    ||||    
T  20095877 gact 20095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17357941 - 17357838
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-aacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| || ||   ||||||||||||| || ||||||| | |||||| |||||    
T  17357941 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgt 17357842  T
Q  260 gact 263  Q
    ||||    
T  17357841 gact 17357838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 26706877 - 26706815
Alignment:
Q  171 ttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaa 233  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaa 26706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 55128893 - 55128792
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||| ||| |||||   ||||||||||||| || ||||||| | |||||| ||||||    
T  55128893 atctgggctgttttatcctggagacggcgcggttgctagtctaccttacac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtg 55128795  T
Q  261 act 263  Q
    |||    
T  55128794 act 55128792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 33089152 - 33089221
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  33089152 tctcttctcccttcgacttgtgttaacgagtcaatcttctgcttctactcctttttgtccctttcggttt 33089221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 12112641 - 12112733
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtga 261  Q
    ||||||||||||||||||| | ||||| |||||| ||||||||||  ||| | |||||| ||||| || ||||||| ||||||||||||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtga 12112733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 15763022 - 15763123
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||  | || |  ||||||||||||| || ||||||| |||||||| |||||    
T  15763022 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac--agttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 15763119  T
Q  260 gact 263  Q
    ||||    
T  15763120 gact 15763123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 15768183 - 15768284
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||  | || |  ||||||||||||| || ||||||| |||||||| |||||    
T  15768183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac--agttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 15768280  T
Q  260 gact 263  Q
    ||||    
T  15768281 gact 15768284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 27605133 - 27605229
Alignment:
Q  167 gctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||| ||||||| |  |||||||||||| |||||||||||| |  |||||| ||||||||| ||||||| |||||| | |||||||||    
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgact 27605229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 8069772 - 8069679
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| |||||||| || ||| | |||||| ||||| || ||||||| |||||||| |||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcac-aatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 8069679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 795399 - 795452
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgcataaact 795452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 1688888 - 1688983
Alignment:
Q  171 ttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaa 266  Q
    |||||||||  | |||||||| |||||| |||| |||||||||||| |  ||||||||| ||| || ||||||| |||||||| ||||||||||||    
T  1688888 ttttatcctaaacgcggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgacttaa 1688983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 758368 - 758462
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||  ||||||| ||||| || ||||||| ||||| || |||||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgact 758462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 6025343 - 6025231
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttat 176  Q
    ||||||||| ||||||||||  ||||||  ||| ||||||||||| |||  ||||||||| |||| |||||||| | |||| ||| ||| ||||||||||    
T  6025343 ggttttaattgaacgattaattcatattttgaggtgtatattctcaagcaattacatactatgcagtacataattg-aacagtgaactgagctgttttat 6025245  T
Q  177 cctggaggcggcgc 190  Q
    ||||||||| ||||    
T  6025244 cctggaggcagcgc 6025231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 7571218 - 7571312
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| | ||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 7571312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 8883263 - 8883169
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||| ||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 8883169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 10586177 - 10586286
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||    
T  10586177 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 10586275  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  10586276 tcaacccggta 10586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 23666123 - 23666217
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 23666217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 24038371 - 24038465
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 24038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 39775728 - 39775822
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 39775822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 49971424 - 49971518
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| | ||| ||||||  |||||||||  ||| |||||||| ||||| || ||||||| | |||||| |||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgact 49971518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 10321546 - 10321444
Alignment:
Q  161 atctgggctgtttt-atcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    |||||||||||||| || |||||| |  |||||||| ||||||| |||||||||  || | ||||||||||||| || ||||||| |||||||| |||||    
T  10321546 atctgggctgtttttattctggagacaacgcggttgctagtctaccttgcacaat-ttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 10321448  T
Q  260 gact 263  Q
    ||||    
T  10321447 gact 10321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 3672679 - 3672585
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||||||  |||| || ||||||| |||||||| |||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgact 3672585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 3692711 - 3692617
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||||||  |||| || ||||||| |||||||| |||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgact 3692617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 8888023 - 8887929
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||  ||| | |||||  | ||| || ||||||| |||||||| |||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgact 8887929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 14438695 - 14438789
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| | ||||  |||||||||  |||  ||||||| ||||| || |||||||  ||||||| |||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgact 14438789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 18467318 - 18467224
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||  ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 18467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 20520147 - 20520053
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||| ||||||  ||||||||| ||||   |||||| ||||| || ||||||| || ||||| |||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgact 20520053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 25023929 - 25023971
Alignment:
Q  174 tatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  25023929 tatcctggaggcggcacggttgttagtctaccttgcacaaact 25023971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 30341836 - 30341937
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    |||||||||||||||||||||||  || ||||||| ||||||| ||| |||||  | |  ||||||||||||| || ||||||| || ||||| ||||||    
T  30341836 atctgggctgttttatcctggagatggtgcggttgctagtctaccttacacaatttagg-tagtgccgcgaaacgtcttaaagaaagtgacctggtcgtg 30341934  T
Q  261 act 263  Q
    |||    
T  30341935 act 30341937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 13022311 - 13022274
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13022311 tctcttctcccttcgacttgtgttaacgagtcattctt 13022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 26928880 - 26928823
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    ||||||||||||| ||||| | |||||||||||| ||| |||||||||| ||||||||    
T  26928880 ttcgacttgtgttgacgagcccttcttctgcttctacttctttctgtcccttcggttt 26928823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 12965873 - 12965917
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaa 12965917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 1741109 - 1741156
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    |||||||||||||||||||||||||||||| | |  ||||||||||||    
T  1741109 tgttttatcctggaggcggcgcggttgttaatttgccttgcacaaact 1741156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 38436767 - 38436826
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| | ||||||||||||||||||  |||||||||||| |||| ||| |||||    
T  38436767 tctcttctccctccgacttgtgttaacgagttgttcttctgcttctactcatttatgtcc 38436826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 16013801 - 16013759
Alignment:
Q  171 ttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||| ||| | |||||||||||||||||    
T  16013801 ttttatcctggaggcggcgtggtggatagtctatcttgcacaa 16013759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgca 210  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 18472100 - 18472056
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 18472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 23661464 - 23661508
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 23661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 32474680 - 32474724
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaa 32474724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 79 - 317
Target Start/End: Complemental strand, 3902100 - 3901859
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt---gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgtttta 175  Q
    ||||||||||||| ||||||||||||||   ||| ||||||||||||| |  ||||||| |||||| ||| ||||   |||| |||||| | || |||||    
T  3902100 ggttttaatcgaatgattaagccatatttttgaggtgtatattctcgaacaattacatattgtgcagtacgtaatta-aacagtgatctagactatttta 3902002  T
Q  176 tcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    |||||||||||||||||||| || |||| |||||||||||||| |||||||||| ||| || ||||||| |||||||| ||||||||| || ||||||||    
T  3902001 tcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaat 3901902  T
Q  276 tcctttggtagt-agttctgatttttaaaacacgaaaacaaca 317  Q
    |||||||||||| | || | ||||||||| |||||||||||||    
T  3901901 tcctttggtagtaattttttatttttaaatcacgaaaacaaca 3901859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 79 - 319
Target Start/End: Original strand, 17281471 - 17281713
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttat 176  Q
    |||||||||| ||||||||| |||||||  ||| |||||||||||||||| ||||||| |||||| |||||| | |||||| |||| |||||||||||||    
T  17281471 ggttttaatcaaacgattaatccatattttgaggtgtatattctcgagcgattacatattgtgcagtacatagttgtaacagtgatttgggctgttttat 17281570  T
Q  177 cctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaatt 276  Q
    |||  |||||  ||||||||||||||| ||| ||||||   |  ||||||||||||| || ||||||| |||||| |  |||||||| || |||||||||    
T  17281571 cctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgactcaacccggtaatt 17281670  T
Q  277 cctttggtagtagttctgatttttaaaacacgaaaacaacaat 319  Q
    ||||| ||||| ||||  |||||| ||||||||||||||||||    
T  17281671 cctttcgtagtggttccaattttttaaacacgaaaacaacaat 17281713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 300
Target Start/End: Original strand, 13605002 - 13605222
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||||||||||||  | |||||  ||| ||||||| |||||| | ||  ||| |||||| |  |||||||||||| |||| ||||||||||||||    
T  13605002 gttttaatcgaacgattagactatatttagaggtgtatat-ctcgagtgattgtatattgtgcagtgtataatcgtaacagtgatttgggctgttttatc 13605100  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| ||| |||||||||||||| || ||||||||||    
T  13605101 ctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactcaacccggtaattc 13605199  T
Q  278 ctttggtagtagttctgattttt 300  Q
    |||||  |||| |||||||||||    
T  13605200 ctttgacagtacttctgattttt 13605222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 80 - 303
Target Start/End: Complemental strand, 19478333 - 19478110
Alignment:
Q  80 gttttaatcgaacgattaagccata--ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    |||||||||||||||| |  | |||  ||||| |||||| ||||||||| ||  |||||||||| |  |||||||||||| |||||||||||||||||||    
T  19478333 gttttaatcgaacgatcagactatattttgaggtgtata-tctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggctgttttatc 19478235  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
     ||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || ||||||||||    
T  19478234 gtggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattc 19478136  T
Q  278 ctttggtagtagttctgatttttaaa 303  Q
    |||||  |||| |||| |||| ||||    
T  19478135 ctttgacagtatttctaatttctaaa 19478110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 79 - 317
Target Start/End: Complemental strand, 29325723 - 29325482
Alignment:
Q  79 ggttttaatcgaacgattaagccatatt---gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgtttta 175  Q
    |||||||||||||| |||||||||| ||   ||| ||||||||||||| |  ||||||| |||||| ||| |||| | |||| ||||||||||| |||||    
T  29325723 ggttttaatcgaacaattaagccatgtttttgaggtgtatattctcgaacaattacataatgtgcagtacgtaattg-aacagtgatctgggctatttta 29325625  T
Q  176 tcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    || |||||||| | | |||||||||||| |||||||||||||   ||||| ||  ||| || ||||| | |||||| |  |||||||| || ||||||||    
T  29325624 tcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtgactcaacccggtaat 29325525  T
Q  276 tcctttggtagtag-ttctgatttttaaaacacgaaaacaaca 317  Q
    | |||||||||||| ||||||||||||||||||||||||||||    
T  29325524 tactttggtagtagtttctgatttttaaaacacgaaaacaaca 29325482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 105 - 303
Target Start/End: Original strand, 31495778 - 31495974
Alignment:
Q  105 ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctat 204  Q
    ||||| ||||||| |||||||| ||| |||||||||| ||  ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||     
T  31495778 ttgaggtgtatat-ctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtttac 31495876  T
Q  205 cttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
     |||||  || || | ||||||||| |||  | ||||||  ||| ||||  |||||||| || ||| |||||||||| ||||| |||||||||||||||    
T  31495877 tttgca-taatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactcaacccgataattcctttagtagtggttctgatttttaaa 31495974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 105 - 303
Target Start/End: Original strand, 31501164 - 31501360
Alignment:
Q  105 ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctat 204  Q
    ||||| ||||||| |||||||| ||| |||||||||| ||  ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||     
T  31501164 ttgaggtgtatat-ctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtttac 31501262  T
Q  205 cttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
     |||||  || || | ||||||||| |||  | ||||||  ||| ||||  |||||||| || ||| |||||||||| ||||| |||||||||||||||    
T  31501263 tttgca-taatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactcaacccgataattcctttagtagtggttctgatttttaaa 31501360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 12182908 - 12183094
Alignment:
Q  79 ggttttaatcgaacgattaagccatat---tgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgtttta 175  Q
    |||||||||||| ||||||||||||||   | || ||||||| ||||| |  ||||||| |||||| ||| | || | || | |||| || |||||||||    
T  12182908 ggttttaatcgagcgattaagccatatcttttaggtgtatatactcgaacaattacatattgtgcaatacgtgattg-aatagtgatatgagctgtttta 12183006  T
Q  176 tcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    | ||||||||| ||||||||||||||||  |||||||||||||  ||||||||||||| || ||||||| |||||||| |||||||||    
T  12183007 ttctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 12183094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 17290131 - 17290212
Alignment:
Q  238 ttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaaacacgaaaacaacaat 319  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17290131 ttaaagaaagcgaccaagtcgtgacttaacccggtaattcctttggtagtagttccgatttttaaaacaagaaaacaacaat 17290212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 10642811 - 10642699
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||| || | |||||||| ||||| || ||||||| |||||| | ||||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  263 ttaaaccggtaat 275  Q
    | || ||||||||    
T  10642711 tcaacccggtaat 10642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 303
Target Start/End: Original strand, 31515668 - 31515864
Alignment:
Q  105 ttgagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctat 204  Q
    ||||| ||||||| |||||||| ||| |||||||||| ||  ||||||||||| |||||| |||||||||||||||||| ||||| |||||||||| ||     
T  31515668 ttgaggtgtatat-ctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctaggctgttttatcctggagacggcgtggttgttagtttac 31515766  T
Q  205 cttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
     |||||  || || | ||||||||| |||  | ||||||  ||| ||||  |||||||| || | | |||||||||| ||||| |||||||||||||||    
T  31515767 tttgca-taatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactcaacctgataattcctttagtagtggttctgatttttaaa 31515864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 147 - 303
Target Start/End: Original strand, 31475993 - 31476148
Alignment:
Q  147 taatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagata 246  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||  | ||||||  ||||| ||||||||||| |||  | ||||||  |    
T  31475993 taatcgtaacagtgatctgagctgttttatcctggagacggcgtggttgttagttgaccttgca-taacttaaatagtgccgccaaacatcttaaagtga 31476091  T
Q  247 gcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
    || ||||  |||||||| || ||| |||||||||| | ||| |||||||||||||||    
T  31476092 gcaacctgatcgtgactcaacccgataattcctttagcagtggttctgatttttaaa 31476148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 21396802 - 21396701
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    |||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  21396802 atctgggctgttttatcctggagatggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21396704  T
Q  261 act 263  Q
    |||    
T  21396703 act 21396701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 24192472 - 24192573
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||    ||||||||||||| || ||||||| |||||||| ||||||    
T  24192472 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 24192570  T
Q  261 act 263  Q
    |||    
T  24192571 act 24192573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 29491229 - 29491330
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||| | ||||||    
T  29491229 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtg 29491327  T
Q  261 act 263  Q
    |||    
T  29491328 act 29491330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 34142183 - 34142082
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||  ||| ||| ||||| || ||||||| |||||||| ||||||    
T  34142183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtg 34142085  T
Q  261 act 263  Q
    |||    
T  34142084 act 34142082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 34154799 - 34154698
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||  ||| ||| ||||| || ||||||| |||||||| ||||||    
T  34154799 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtg 34154701  T
Q  261 act 263  Q
    |||    
T  34154700 act 34154698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 22698235 - 22698336
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  22698235 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 22698332  T
Q  260 gact 263  Q
    ||||    
T  22698333 gact 22698336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 5600971 - 5601066
Alignment:
Q  168 ctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||| |||||||||||||||||||| |||| ||| |||||||| |  ||||| ||||||| || ||||||| |||||||| |||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgact 5601066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 31981663 - 31981549
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    |||||| |||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  31981663 atctggcctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 31981565  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  31981564 actcaccccggtaatt 31981549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 5740779 - 5740905
Alignment:
Q  158 ttgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtc 257  Q
    |||| ||| ||| ||||||||| | ||||||||||||| ||||| | ||||||||||||||| ||||| || |||| || ||||||| || |||||||||    
T  5740779 ttgaactgagctattttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagagagtgacctagtc 5740878  T
Q  258 gtgacttaaaccggtaattcctttggt 284  Q
     ||||| || ||||||||  |||||||    
T  5740879 atgactcaacccggtaatctctttggt 5740905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 22703358 - 22703459
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| | |||| || |||||    
T  22703358 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacataatcgtg 22703456  T
Q  261 act 263  Q
    |||    
T  22703457 act 22703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 24191375 - 24191476
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| ||    ||||||||||||| || ||||||| |||||||| ||||||    
T  24191375 atctgggctgttttatcctggagacggcgcggttactagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 24191473  T
Q  261 act 263  Q
    |||    
T  24191474 act 24191476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 22713878 - 22713706
Alignment:
Q  82 tttaatcgaacgattaagccatattgagt-tgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctg 180  Q
    ||||||||||||||||| ||||||||||  |||   || |||| || |||| ||| ||||| ||| |||| | |  | ||| ||| ||| ||||||||||    
T  22713878 tttaatcgaacgattaaaccatattgaggatgttatttttcgaacgattacttacggtgcaatacgtaattgaacaagtgaactgagctattttatcctg 22713779  T
Q  181 gaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
     ||| ||||||||||||||||||||||||||||||| || |||||| || ||| || ||||||| || |||||    
T  22713778 aaggtggcgcggttgttagtctatcttgcacaaactcgagtagtgctgcaaaacgtcttaaagagagtgacct 22713706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 2700106 - 2700200
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||| |||||| ||||| |||||| ||||||||||  ||||| |||||| ||||| || ||||||| ||||| || |||||||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgact 2700200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13604911 - 13604965
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttc 69  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  13604911 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttatactcctttc 13604965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 34376022 - 34375921
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| || ||||  |||||| |||||   ||||||||||||| || ||||||| ||||||||  |||||    
T  34376022 atctgggctgttttatcctggagacggcgcggttgctaatctacgttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtg 34375924  T
Q  261 act 263  Q
    |||    
T  34375923 act 34375921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 19478434 - 19478364
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggtttt 84  Q
    |||||||| | ||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||||||||    
T  19478434 tctcttcttccttcgacttgtgttaacgagtcattcttctacttctactcatttttgtccctttcggtttt 19478364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 24589164 - 24589258
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||  ||| | |||| | ||||| |||||||||| ||||| ||  ||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgact 24589258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 3902188 - 3902131
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||| ||| ||||    
T  3902188 ttcgaattgtgttgacgagtcattcttctgcttctactcctttctgtcccttcagttt 3902131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 17281377 - 17281430
Alignment:
Q  18 cttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtc 73  Q
    ||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  17281377 cttctcccttcgacttgtgttaacgagt--ttcttctgcttctactcctttctgtc 17281430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 21401844 - 21401757
Alignment:
Q  175 atcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||||| ||| ||||| |||   ||||||||||||| || ||||||| |||||||| |||||||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 21401757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 29325811 - 29325763
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||||    
T  29325811 ttcgacttgtgttgacgagtccttcttctgcttctactcctttctgtcc 29325763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 17964559 - 17964634
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaaga 244  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||| |||||||| ||||| || |||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 3902546 - 3902489
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    ||||||||||||| |||||||||||||||||||| ||| |||| ||||| ||| ||||    
T  3902546 ttcgacttgtgttgacgagtcattcttctgcttctacttctttttgtcccttcagttt 3902489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 2818139 - 2818191
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||| ||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  2818139 atctgagctgttttatcctggagacggcgcggtttctagtctaccttgcacaa 2818191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 10642981 - 10642927
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||    
T  10642981 gacttgtgttaacgagtccttcttgttcttctactcctttctgtcccgtcggttt 10642927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 11570749 - 11570843
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| | ||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| || ||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgact 11570843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 11614092 - 11614136
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 11614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 14073719 - 14073671
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    ||||||||||||| ||||||| |||||||  ||| ||||||||||||||    
T  14073719 ttcgacttgtgttgacgagtctttcttctttttctactcctttctgtcc 14073671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 33687603 - 33687687
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    ||||||||||||||| ||||  ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| ||||||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacct 33687687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 303
Target Start/End: Complemental strand, 42914827 - 42914604
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||||||||||||| | |||||  ||| ||||||| |||||||| ||  ||||| |||| |  |||||||||||| |||| ||||||||||||||    
T  42914827 gttttaatcgaacgattaaactatattcagaggtgtatat-ctcgagcgattgtatactatgcagtgtataatcgtaacagtgatttgggctgttttatc 42914729  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||| |||||   ||||||||||||| || ||||||| | |||||| ||||||||| || ||| ||||||    
T  42914728 ctggagacggcgtggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacccgctaattc 42914630  T
Q  278 ctttggtagtagttctgatttttaaa 303  Q
    |||||| |||| ||||||||||||||    
T  42914629 ctttggcagtacttctgatttttaaa 42914604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 81 - 282
Target Start/End: Complemental strand, 5089462 - 5089261
Alignment:
Q  81 ttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    |||||||||||||||||  | |||||  ||| ||||||| |||||||| ||  |||||||||| |  |||||||||||| |||| | |||||||||||||    
T  5089462 ttttaatcgaacgattagactatatttagaggtgtatat-ctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatttaggctgttttatcc 5089364  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    ||||| ||||| ||||||||||||| ||||||| |||||| |||||||||||||| || ||||||| |||||||| ||| ||||| || ||| |||||||    
T  5089363 tggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaatccgataattcc 5089265  T
Q  279 tttg 282  Q
    ||||    
T  5089264 tttg 5089261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 42914928 - 42914859
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  42914928 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtccctttcggttt 42914859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 42723443 - 42723544
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  42723443 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 42723540  T
Q  260 gact 263  Q
    ||||    
T  42723541 gact 42723544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 42728612 - 42728713
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  42728612 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 42728709  T
Q  260 gact 263  Q
    ||||    
T  42728710 gact 42728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 44096405 - 44096304
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  44096405 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 44096308  T
Q  260 gact 263  Q
    ||||    
T  44096307 gact 44096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 44754588 - 44754689
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  44754588 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 44754685  T
Q  260 gact 263  Q
    ||||    
T  44754686 gact 44754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 44759754 - 44759855
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  44759754 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 44759851  T
Q  260 gact 263  Q
    ||||    
T  44759852 gact 44759855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 30658358 - 30658264
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||| ||||||| ||||| || ||||||| |||||||| |||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 30658264  T

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Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 40518464 - 40518565
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||  | ||   ||||||||||||| || ||||||| |||||||| ||||||    
T  40518464 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-tatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 40518562  T
Q  261 act 263  Q
    |||    
T  40518563 act 40518565  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 19538458 - 19538377
Alignment:
Q  192 gttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    |||||||||||| |||||||||||| | ||||||||| ||||||| ||||||| |||||||| ||||||||| || ||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccggta 19538377  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 11658882 - 11658970
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgac 251  Q
    |||| |||||||||| ||||||||| || |||||||||||| |||||||||| | || |||||||| ||||||| ||||||| ||||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgac 11658970  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 5089564 - 5089505
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  5089564 tctcttctcccttcgacttattttaacgagtcattcttctgcttctactcctttctgtcc 5089505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 1934993 - 1935087
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 1935087  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 9180724 - 9180818
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||| | |||||| ||||| || ||||||| |||||||| |||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 9180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 28751721 - 28751822
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||| ||||||| | ||||| ||||||| |||||   ||||||||||||| || | ||||| |||||||| ||||||    
T  28751721 atctgggctgttttatcctggagacggtgcggttgcttgtctaccttgcac-aacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtg 28751819  T
Q  261 act 263  Q
    |||    
T  28751820 act 28751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 28945266 - 28945191
Alignment:
Q  167 gctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaa 242  Q
    |||||||||||||||||||  ||||||||||||| || |||||||||||| |  ||||||||||||| || |||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

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Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 9189803 - 9189897
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||| | |||||| ||||| || ||||||| ||| |||| |||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgact 9189897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 10160724 - 10160818
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 10160818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 19892466 - 19892560
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| | ||||||||  ||| | ||||||  |||| || ||||||| |||||||| |||||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgact 19892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 17327508 - 17327451
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaa 220  Q
    |||| |||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  17327508 ctggactgttttatcctggaggcggcgcgattgttggtctaccttacacaaacttgaa 17327451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 35602017 - 35601925
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtga 261  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||  ||| | |||||| ||||| || ||||| | |||||||| |||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtga 35601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 40392419 - 40392340
Alignment:
Q  164 tgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaaga 244  Q
    |||||||||||||||||||| ||||| ||||| ||||||| ||||||| |||||   ||||||||||||| || |||||||    
T  40392419 tgggctgttttatcctggagacggcgtggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaga 40392340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 39543004 - 39542893
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtc-tatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtga 261  Q
    ||||||| |||||||||||||||   ||||||||||||| || ||| ||||||||    |||||||| |||| || ||||||| ||||||||  ||||||    
T  39543004 ctgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtcttaaagagagcgacctgatcgtga 39542905  T
Q  262 cttaaaccggta 273  Q
    || |||||||||    
T  39542904 ctcaaaccggta 39542893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 25497325 - 25497419
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||| |||   ||||   ||||| || ||||||| |||||||| |||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgact 25497419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 28855077 - 28854996
Alignment:
Q  192 gttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    |||||||||||| |||| ||||||||| ||||||||| |||| || ||||||| |||||||  || |||||| || ||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccggta 28854996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 6297886 - 6297989
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaac 268  Q
    |||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||| || |    
T  6297886 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacc 6297984  T
Q  269 cggta 273  Q
    |||||    
T  6297985 cggta 6297989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 7737851 - 7737895
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaa 7737895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 44683222 - 44683171
Alignment:
Q  193 ttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaaga 244  Q
    ||||||||||| ||| |||||||| | |||||||||||||| ||||||||||    
T  44683222 ttgttagtctaccttacacaaactcggatagtgccgcgaaacgttttaaaga 44683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 18344526 - 18344432
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||| ||||| ||||  ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 18344432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 30631674 - 30631580
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||| |||| ||||| |||||| ||||||||||  ||    | |||| ||||| |||||||||| || |||||| ||||||||    
T  30631674 tgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaatcgtgact 30631580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 30651024 - 30650930
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| ||||| || |||||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgact 30650930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 42926763 - 42926803
Alignment:
Q  173 ttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||| ||||| ||||||| |||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaa 42926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 19430199 - 19429991
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||||||||||||||||    
T  19430199 gttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcc 19430100  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    | ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || |||||||||||    
T  19430099 tagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattcc 19430001  T
Q  279 tttggtagta 288  Q
    ||||| ||||    
T  19430000 tttggcagta 19429991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 19435701 - 19435493
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||||||||||||||||    
T  19435701 gttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcc 19435602  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    | ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || |||||||||||    
T  19435601 tagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattcc 19435503  T
Q  279 tttggtagta 288  Q
    ||||| ||||    
T  19435502 tttggcagta 19435493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 19566348 - 19566140
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||||||||||||||||    
T  19566348 gttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcc 19566249  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    | ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || |||||||||||    
T  19566248 tagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattcc 19566150  T
Q  279 tttggtagta 288  Q
    ||||| ||||    
T  19566149 tttggcagta 19566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 19571850 - 19571642
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||||||||||||||||    
T  19571850 gttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcc 19571751  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcc 278  Q
    | ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || |||||||||||    
T  19571750 tagagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaattcc 19571652  T
Q  279 tttggtagta 288  Q
    ||||| ||||    
T  19571651 tttggcagta 19571642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 33616638 - 33616845
Alignment:
Q  82 tttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcct 179  Q
    ||||||| ||||||||| | |||||  ||| |||||||   |||||| ||  |||||||||| || |||||||||||| |||||||||||||||||||||    
T  33616638 tttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcct 33616737  T
Q  180 ggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcct 279  Q
    |||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || ||| |||||| |    
T  33616738 ggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatccgataattctt 33616836  T
Q  280 ttggtagta 288  Q
    |||| ||||    
T  33616837 ttggcagta 33616845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 80 - 282
Target Start/End: Complemental strand, 31030714 - 31030511
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    |||| |||||||||||||| | |||||  ||| |||||||   |||||| ||  |||||||||| || |||||||||||| |||||||||||||||||||    
T  31030714 gtttcaatcgaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatc 31030615  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||  || |||  ||||| ||||||| || ||||||| |||||||| ||||||||| || ||| ||||||    
T  31030614 ctggagacggcgtggttgttagtctaccttgca-taatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccgataattc 31030516  T
Q  278 ctttg 282  Q
    |||||    
T  31030515 ctttg 31030511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 13584490 - 13584354
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-------aacttgaatagt 224  Q
    |||||||||| || |||||||||||| |||||||  |||||||||||||||| ||||| ||||||||||||| ||||||||       ||||||  ||||    
T  13584490 atactgtgcagtatataatcgtaacagtgatctgaactgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagt 13584391  T
Q  225 gccgcgaaatgttttaaagatagcgacctagtcgtga 261  Q
    ||||||||| || ||||||| |||||||| |||||||    
T  13584390 gccgcgaaacgtcttaaagagagcgacctggtcgtga 13584354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 13584586 - 13584517
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  13584586 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtccctttcggttt 13584517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 31030815 - 31030746
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  31030815 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtccctttcggttt 31030746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 21644073 - 21644172
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  21644073 atctgggctgttttatcctggagtcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21644171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 42514368 - 42514467
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||| ||||    
T  42514368 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcatgac 42514466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 33616539 - 33616594
Alignment:
Q  19 ttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33616539 ttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtcc 33616594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 17955781 - 17955882
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||| | |||||||| ||||||    
T  17955781 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17955879  T
Q  261 act 263  Q
    |||    
T  17955880 act 17955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 32015803 - 32015702
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||| ||||| || ||||||| |||||||| |||||    
T  32015803 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgt 32015706  T
Q  260 gact 263  Q
    ||||    
T  32015705 gact 32015702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 31449866 - 31449960
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 31449960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 38182237 - 38182331
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| || |||  ||||||||| ||||   |||||| ||||| |||||||||| |||||||| |||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgact 38182331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 43999222 - 43999323
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| |||||| |||| ||||||| |||||||||  | |  ||||||||||||| |||||||||| | ||||||  |||||    
T  43999222 atctgggctgttttatcctggagacggcgcagttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgttttaaagaaaacgacctgatcgtg 43999320  T
Q  261 act 263  Q
    |||    
T  43999321 act 43999323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 44925923 - 44926017
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| |||||||||| |||||||| |||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgact 44926017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 24884816 - 24884714
Alignment:
Q  161 atctgggctgtttt-atcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||| ||||||| |||||   ||||||||| ||| || ||||||| ||| |||| |||||    
T  24884816 atctgggctgtttttatcctggagacggcgtggttgctagtctaccttgcac-aacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgt 24884718  T
Q  260 gact 263  Q
    ||||    
T  24884717 gact 24884714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 17026030 - 17025936
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||||| || | ||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 17025936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 17556522 - 17556428
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||||| || | ||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 17556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 18876367 - 18876460
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||| | |||||||| |||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgact 18876460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 33416642 - 33416548
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| | |||||| |||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgact 33416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 1910969 - 1911066
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaa 266  Q
    |||||||| |||||||| ||| ||||| ||||||   ||||||||  |||| ||||||| ||||| || ||||||| ||||||||  |||||||||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaa 1911066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19430298 - 19430261
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19430298 tctcttctcccttcgacttgtgttaacgagtcattctt 19430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19435800 - 19435763
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19435800 tctcttctcccttcgacttgtgttaacgagtcattctt 19435763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19566447 - 19566410
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19566447 tctcttctcccttcgacttgtgttaacgagtcattctt 19566410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19571949 - 19571912
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19571949 tctcttctcccttcgacttgtgttaacgagtcattctt 19571912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 1807565 - 1807473
Alignment:
Q  171 ttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||| ||||| ||||||  |||||||||  |||   |||| | ||||| || ||||||| ||||||||||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgact 1807473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 43302718 - 43302762
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaa 43302762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 21827452 - 21827503
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcgg 80  Q
    |||||||||| ||||||| |||||||  ||| ||||||||||||||||||||    
T  21827452 gacttgtgttgacgagtctttcttctttttctactcctttctgtcctttcgg 21827503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 15875668 - 15875758
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| ||  |||||| |||||||| |||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgt 15875758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 19166729 - 19166635
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  | |||||||  |||   |||||| ||||| || ||||||| |||||| | |||||||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgact 19166635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 36683674 - 36683580
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||| ||| ||||| ||||||  ||| |||||  |||   |||||| ||||| || ||||||| |||||||||||| |||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgact 36683580  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 40125885 - 40125979
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| ||||| || |||||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgact 40125979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 15150348 - 15150311
Alignment:
Q  164 tgggctgttttatcctggaggcggcgcggttgttagtc 201  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  15150348 tgggctgttttatcctggaggtgccgcggttgttagtc 15150311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 37771812 - 37771713
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    ||||| |||||||||||||||||  | |||||||||||||| ||| |||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||    
T  37771812 ctgggttgttttatcctggaggc-acacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 37771714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 9973647 - 9973427
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    |||| |||||||||||||  | |||||  ||| ||||||| |||||||| ||  |||||||||| |  |||||||||||| ||||||||| |||||||||    
T  9973647 gtttcaatcgaacgattagactatatttagaggtgtatat-ctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggttgttttatc 9973549  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||| ||||| ||||||| |||||| |||||||||||||| || ||||||| |||||||| ||||||||| || ||||||||||    
T  9973548 ctggagacggcgtggttgttcgtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacccggtaattc 9973450  T
Q  278 ctttggtagtagttctgattttt 300  Q
    |||||  | || |||||||||||    
T  9973449 ctttgacaatacttctgattttt 9973427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 132 - 288
Target Start/End: Original strand, 28292467 - 28292620
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||| |||| ||||||||||||    
T  28292467 atactgtgcagtatataatcgtaacagtgatctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcga 28292564  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagta 288  Q
    || || ||||| | |||||||| |||||||||||| |||||||||||||||| ||||    
T  28292565 aacgtcttaaa-agagcgacctggtcgtgacttaacccggtaattcctttggcagta 28292620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 24528540 - 24528331
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||| ||||||||| | |||||  ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||| |||||||||||    
T  24528540 gttttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgagctgttttatc 24528441  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||  || |||||| ||| || ||||||| |||||||| ||||||||| || ||| ||||||    
T  24528440 ctggagacggcgtggttgttagtctaccttgcac-aacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccgataattc 24528342  T
Q  278 ctttggtagta 288  Q
    |||||| ||||    
T  24528341 ctttggcagta 24528331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 33226546 - 33226396
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| || |||||||||||| ||||||| ||||||||||||||| | ||||| ||||||||||||| ||||||  |||||   |||||||||||    
T  33226546 atactgtgcagtatataatcgtaacagtgatctgagctgttttatcctggtgacggcgtggttgttagtctaccttgca-taacttaggtagtgccgcga 33226448  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttgg 283  Q
    || || ||||||| |||||||| ||||||||||||  || ||||||||||||    
T  33226447 aacgtcttaaagagagcgacctggtcgtgacttaacgcgataattcctttgg 33226396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 12934500 - 12934399
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||    |||||||||||||||| ||||||| |||||||| ||||||    
T  12934500 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtg 12934402  T
Q  261 act 263  Q
    |||    
T  12934401 act 12934399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 16539404 - 16539505
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  16539404 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 16539502  T
Q  261 act 263  Q
    |||    
T  16539503 act 16539505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 16626258 - 16626157
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  16626258 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 16626160  T
Q  261 act 263  Q
    |||    
T  16626159 act 16626157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 42572048 - 42571947
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  42572048 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 42571950  T
Q  261 act 263  Q
    |||    
T  42571949 act 42571947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 28292312 - 28292381
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  28292312 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtccctttcggttt 28292381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 24528641 - 24528582
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24528641 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcctttctgtcc 24528582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 9973748 - 9973679
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  9973748 tctcttctcccttcgacttgtgttaacgagtcattcttctgcttcaactcctttccgtccctttcggttt 9973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 33238105 - 33238004
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  33238105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 33238008  T
Q  260 gact 263  Q
    ||||    
T  33238007 gact 33238004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 47999078 - 47998977
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  47999078 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 47998981  T
Q  260 gact 263  Q
    ||||    
T  47998980 gact 47998977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 21081031 - 21081134
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-aacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||| |||||||| || ||   ||||||||||||| || ||||||| |||||||| |||||    
T  21081031 atctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 21081130  T
Q  260 gact 263  Q
    ||||    
T  21081131 gact 21081134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 47177111 - 47177225
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| |||||||||||||| || ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  47177111 atctgagctgttttatcctgaagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 47177209  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  47177210 actcaccccggtaatt 47177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 2234622 - 2234723
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| ||| |||| ||||||    
T  2234622 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcaacctggtcgtg 2234720  T
Q  261 act 263  Q
    |||    
T  2234721 act 2234723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17495506 - 17495405
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||| | |||||||| ||||||    
T  17495506 atctgggctgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17495408  T
Q  261 act 263  Q
    |||    
T  17495407 act 17495405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 17557708 - 17557809
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||| | |||||||| ||||||    
T  17557708 atctgggctgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtg 17557806  T
Q  261 act 263  Q
    |||    
T  17557807 act 17557809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 32212646 - 32212747
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  32212646 atctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 32212744  T
Q  261 act 263  Q
    |||    
T  32212745 act 32212747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 19309603 - 19309694
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   | ||||||||||| || ||||||| ||||||||    
T  19309603 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtggtgccgcgaaacgtcttaaagacagcgacct 19309694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 33243282 - 33243181
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| || ||||| |||||    
T  33243282 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgt 33243185  T
Q  260 gact 263  Q
    ||||    
T  33243184 gact 33243181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 47993903 - 47993802
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| || ||    
T  47993903 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgt 47993806  T
Q  260 gact 263  Q
    ||||    
T  47993805 gact 47993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 43892961 - 43892847
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||||   |||||||| |||| || ||||||| |||||||| ||||||    
T  43892961 atctgagctgttttatcctggagacggcgcggttgctagtttaccttgcac-aacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtg 43892863  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  43892862 actcaccccggtaatt 43892847  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 9650967 - 9651061
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 9651061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 23866163 - 23866069
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 23866069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 26341294 - 26341200
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| |||||||| ||||||| |||||||| |||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgact 26341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 4579603 - 4579509
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 4579509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 27256343 - 27256234
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||    
T  27256343 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 27256245  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  27256244 tcaacccggta 27256234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 33226633 - 33226577
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   ||||||||||||||    
T  33226633 tctcttctcccttcgacttgtgttaacgagtcgttcttctgct---actcctttctgtcc 33226577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 47761898 - 47761841
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  47761898 ttcgacttgtgttgacgagtctttcttctgcttctactcctttttgtcccttcggttt 47761841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 8076145 - 8076051
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||| ||| ||||| |||||| ||||||||||  ||    |||||| ||||| || ||||||| |||||||| |||||||||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 8076051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 23246933 - 23247027
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| |||||  | ||||||| |||||||| |||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgact 23247027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 44510677 - 44510771
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  ||| | |||||| | ||| || ||||||| ||| | || |||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgact 44510771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 4930328 - 4930234
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||| |  ||| |||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 4930234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 7875088 - 7875150
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtg 225  Q
    |||| ||| ||||||||| ||||||||| ||||||||||||  ||||||||||| || |||||    
T  7875088 ctggactgctttatcctgcaggcggcgcagttgttagtctacgttgcacaaactcgagtagtg 7875150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 19096838 - 19096780
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    ||||||||||||| ||||||| |||||||  ||| |||||||||||| |||||||||||    
T  19096838 ttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcggttt 19096780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 14928149 - 14928194
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||||||||||| |||||||  ||| ||||||||||||||    
T  14928149 gacttgtgttaacgagtctttcttctttttctactcctttctgtcc 14928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 15351615 - 15351660
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||||||||||| |||||||  ||| ||||||||||||||    
T  15351615 gacttgtgttaacgagtctttcttctttttctactcctttctgtcc 15351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19640395 - 19640347
Alignment:
Q  167 gctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    ||||||||||||||||||| || ||||| |||||||| ||||||||||||    
T  19640395 gctgttttatcctggaggc-gcacggttcttagtctaccttgcacaaact 19640347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 7e-38; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 84 - 263
Target Start/End: Original strand, 13582604 - 13582783
Alignment:
Q  84 taatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctgga 182  Q
    ||||||||||||||| | ||||| ||| |||||||   |||||| ||  |||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  13582604 taatcgaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctgga 13582703  T
Q  183 ggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    | ||||| ||||||||||||| |||||||||| |||  ||||||||||||| || ||||||| |||||||| |||||||||    
T  13582704 gacggcgtggttgttagtctaccttgcacaaa-ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 13582783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 84 - 263
Target Start/End: Original strand, 24435783 - 24435962
Alignment:
Q  84 taatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctgga 182  Q
    ||||| ||||||||| | ||||| ||| |||||||   |||||| ||  |||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  24435783 taatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctgga 24435882  T
Q  183 ggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    | ||||| ||||| ||||||| ||||||| |||||| |||||||||||||| || ||||||| |||||||| |||||||||    
T  24435883 gacggcgtggttgatagtctaccttgcac-aacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 24435962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 82 - 263
Target Start/End: Complemental strand, 7805254 - 7805073
Alignment:
Q  82 tttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctg 180  Q
    ||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  |||||||||| || |||||||||||| ||||||||||||||||||||||    
T  7805254 tttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctg 7805155  T
Q  181 gaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| || ||||| |||||||||    
T  7805154 gagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgact 7805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 82 - 273
Target Start/End: Complemental strand, 14374318 - 14374127
Alignment:
Q  82 tttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctg 180  Q
    ||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  |||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  14374318 tttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtgtataatcgtaacagtgatctgggctgttttatcctg 14374219  T
Q  181 gaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    ||| ||||| ||||||||||||| | ||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || ||||||    
T  14374218 gagacggcgtggttgttagtctaccctgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 36253929 - 36253828
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  36253929 atctgggctgttttatcctggaggcggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 36253831  T
Q  261 act 263  Q
    |||    
T  36253830 act 36253828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17510161 - 17510060
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  17510161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17510063  T
Q  261 act 263  Q
    |||    
T  17510062 act 17510060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 24771349 - 24771450
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||   |||||||||||||  | ||||||| |||||||| ||||||    
T  24771349 atctgggttgttttatcctggagacggcgcggttgttagtctaccttgcac-aacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtg 24771447  T
Q  261 act 263  Q
    |||    
T  24771448 act 24771450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 42019676 - 42019575
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  42019676 atctgggctgttttatcctggagacggcacggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 42019578  T
Q  261 act 263  Q
    |||    
T  42019577 act 42019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 17505056 - 17504955
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| | |||||| ||||||    
T  17505056 atctgggctgttttatcctggagacgacgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtg 17504958  T
Q  261 act 263  Q
    |||    
T  17504957 act 17504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 41858696 - 41858595
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   |||||||| |||| || ||||||| ||||||||  |||||    
T  41858696 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtg 41858598  T
Q  261 act 263  Q
    |||    
T  41858597 act 41858595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 26709207 - 26709104
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-aacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    |||||||||||||||||||||||  | |||||||| ||||||| |||||||| || ||   ||||||||||||| || ||||||| |||||||| |||||    
T  26709207 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 26709108  T
Q  260 gact 263  Q
    ||||    
T  26709107 gact 26709104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 26978941 - 26978838
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcaca-aacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    |||||||||||||||||||||||  | |||||||| ||||||| |||||||| || ||   ||||||||||||| || ||||||| |||||||| |||||    
T  26978941 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 26978842  T
Q  260 gact 263  Q
    ||||    
T  26978841 gact 26978838  T

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Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 41587160 - 41587259
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaac 268  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  ||||| |||| | ||||| || ||||||| ||| |||| ||||||||| ||||    
T  41587160 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactcaaac 41587259  T

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Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 37248795 - 37248889
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||   ||||||| |||||||| ||||||| |||||||| |||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgact 37248889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 24435679 - 24435738
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| |||||||||  |||| |||||||||||||||||| ||||||||||||||    
T  24435679 tctcttctcccttcgacttgaattaaagagtcattcttctgcttctactcctttctgtcc 24435738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 24776804 - 24776908
Alignment:
Q  161 atctgggctgttttatcctgga---ggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtc 257  Q
    ||||||||||||||||||||||   |||| |||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||| | |||    
T  24776804 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtc 24776902  T
Q  258 gtgact 263  Q
    ||||||    
T  24776903 gtgact 24776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 28857958 - 28857851
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgt-tttaaagatagcgacctagtcgtgacttaaa 267  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||||    ||||||||||||| || || ||||| |||||| | ||||||||| ||     
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 28857859  T
Q  268 ccggtaat 275  Q
    ||||||||    
T  28857858 ccggtaat 28857851  T

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Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 1414051 - 1414144
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| ||||||||  ||||||||    
T  1414051 tgttttatcttggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgact 1414144  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 7451853 - 7451759
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||| ||| ||||| ||||||  |||||||||  ||| | |||||| ||||| || ||||||| |||||||| |||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 7451759  T

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Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 13301482 - 13301579
Alignment:
Q  165 gggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||||||||  | |||||||||||||| |||||||||  |||  |||||||| ||  ||| ||||||| |||||||| |||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgact 13301579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 21323960 - 21324069
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | | ||||||||| ||  ||| ||||||| |||||||| ||| ||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgac 21324058  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  21324059 tcaacccggta 21324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 26667367 - 26667273
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 26667273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 26938964 - 26938870
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 26938870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 29167973 - 29168067
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 29168067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 32461549 - 32461643
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| | ||| || ||||||| |||||||| |||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgact 32461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 39523144 - 39523050
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||    ||||| ||||| || ||||||| |||||||| |||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgact 39523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 41853651 - 41853550
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||| | ||| ||||||||||| |||||||  |||||| |||||   ||||| ||||||| || ||||||| |||||||| ||||||    
T  41853651 atctgggctgttttatcgtagagacggcgcggttgctagtctactttgcac-aacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtg 41853553  T
Q  261 act 263  Q
    |||    
T  41853552 act 41853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 42001529 - 42001435
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| |||| |||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 42001435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 556790 - 556696
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| | ||| || ||||||| |||||||| |||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgact 556696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 561562 - 561468
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| | ||| || ||||||| |||||||| |||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgact 561468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 12045139 - 12045233
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||| | |||||| ||||||||||  |||   |||||| ||||| || |||||||  ||||||| |||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgact 12045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 12103120 - 12103030
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgt 12103030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 12501899 - 12501993
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| | ||||||||  |||   |||||| ||||| || ||||||| |||||||| ||| |||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgact 12501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 31731644 - 31731535
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||  ||  ||| ||||||| |||||||| ||||||||    
T  31731644 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaagaaagcgacctggtcgtgac 31731546  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  31731545 tcaacccggta 31731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 31986822 - 31986728
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||| |||||||||  |||||| |||| |||||| ||||| |  ||||| ||||||| || ||||||| ||||||||  ||||||||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgact 31986728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 36423732 - 36423638
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||| |||||||||||| ||||| ||||||  |||||||||  |||   |||||||||||| || ||||||| |||||||| |||| ||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgact 36423638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 36428804 - 36428710
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||| |||| ||| || ||||||| |||||||| |||||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgact 36428710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 36937511 - 36937605
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||||||  |||| || ||||||| |||||||| |||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgact 36937605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 36942265 - 36942359
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   ||||||  |||| || ||||||| |||||||| |||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgact 36942359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 41996760 - 41996666
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| |||| |||||  |||   |||||| ||||| || ||||||| ||| |||| |||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgact 41996666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7805354 - 7805317
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7805354 tctcttctcccttcgacttgtgttaacgagtcattctt 7805317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 13582501 - 13582538
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13582501 tctcttctcccttcgacttgtgttaacgagtcattctt 13582538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14374418 - 14374381
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  14374418 tctcttctcccttcgacttgtgttaacgagtcattctt 14374381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 9077085 - 9077037
Alignment:
Q  168 ctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  9077085 ctgttttattctggaagcggcgcagttgttagtctatcttgcataaact 9077037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 35679875 - 35679959
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacct 253  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  ||  | |||||| ||||| || ||||||| ||||||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacct 35679959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 3666027 - 3665933
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||| |||| |||| ||||| ||||||  |||||||||  |||   |||||| ||||| || || |||| ||||||||||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgact 3665933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 6155419 - 6155513
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||| | ||||| |||||| ||||| | ||  ||| | |||||| ||||| || ||||||| ||||||||  ||||||||    
T  6155419 tgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 6155513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 40147988 - 40147946
Alignment:
Q  171 ttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaa 40147946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 10759820 - 10759864
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 10759864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 36424249 - 36424193
Alignment:
Q  24 cattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcgg 80  Q
    ||||||||||||||| || ||||||||| ||  ||| |||||||||||||| |||||    
T  36424249 cattcgacttgtgttgacaagtcattctcctttttctactcctttctgtcccttcgg 36424193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 1697 - 1548
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||| | || |||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||  |||||||||||    
T  1697 atactgtgaagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcga 1599  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttg 282  Q
    || || ||||||| |||||||| |||||||||||| ||| ||||| |||||    
T  1598 aacgtcttaaagagagcgacctggtcgtgacttaacccgataatttctttg 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 132 - 288
Target Start/End: Complemental strand, 7178 - 7023
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||| | || |||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||  |||||||||||    
T  7178 atactgtgtagtatataatcgtaacagtgatctgagctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcga 7080  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagta 288  Q
    || || ||||||| | |||||| ||||| ||| || ||| |||||||||||| ||||    
T  7079 aacgtcttaaagagaacgacctggtcgtaactcaacccgataattcctttggcagta 7023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 7333 - 7264
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||| |||| |||||||||||| |||| ||||||| |||||||||||    
T  7333 tctcttctcccttcgacttgtgttaacaagtcgttcttctgcttctactcttttctgtccctttcggttt 7264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 1852 - 1783
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||| |||| ||||||| ||||  ||||||||||| |||||||||||    
T  1852 tctcttctcccttcgacttgtgttaacaagtcgttcttctacttctgctcctttctgtccctttcggttt 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 303
Target Start/End: Original strand, 5602335 - 5602558
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||| ||||||||| | |||||  ||| ||||||| |||||||| ||  |||||||||| |  |||||||||| | |||||||| ||||||||||    
T  5602335 gttttaatcaaacgattaaactatattttgaggtgtatat-ctcgagcgattgtatactgtgcagtgtataatcgtaatagtgatctggactgttttatc 5602433  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
     ||||| ||||| ||||||||||||| ||||||| |||| |  |||||| |||||| || ||||||| ||||| || ||||||||| || ||||||||||    
T  5602434 ttggagacggcgtggttgttagtctaccttgcac-aactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactcaacccggtaattc 5602532  T
Q  278 ctttggtagtagttctgatttttaaa 303  Q
    |||||| |||| ||||||||||||||    
T  5602533 ctttggcagtacttctgatttttaaa 5602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 38734406 - 38734252
Alignment:
Q  133 tactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaa 232  Q
    ||||||||| || |||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||| ||||||| |||| |  ||||||||||||    
T  38734406 tactgtgcagtatataatcgtaacagtgatctggactgttttatcctggagacggcgtggttgttagtctaccttgcac-aactagggtagtgccgcgaa 38734308  T
Q  233 atgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagta 288  Q
    | || ||||||| |||||||| ||||||||| || ||| |||||||||||| ||||    
T  38734307 acgtcttaaagagagcgacctggtcgtgactcaacccgataattcctttggcagta 38734252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 82 - 273
Target Start/End: Complemental strand, 10106286 - 10106095
Alignment:
Q  82 tttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcctg 180  Q
    ||||||| ||||||||| | ||||| ||| |||||||   |||||| ||  ||| |||||| || |||||||||||| ||||||||| ||||||||||||    
T  10106286 tttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatattgtgcagtatataatcgtaacagtgatctgggttgttttatcctg 10106187  T
Q  181 gaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    ||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||| || ||||||| |||||||| ||||||||| || ||||||    
T  10106186 gagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 273
Target Start/End: Complemental strand, 13890998 - 13890805
Alignment:
Q  80 gttttaatcgaacgattaagccatatt-gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatcc 178  Q
    ||||||||| ||||||||| | ||||| ||| |||||||   |||||| ||   || |||||| || |||||||||||| ||||||||||||||||||||    
T  13890998 gttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtgtattgtgcagtatataatcgtaacagtgatctgggctgttttatcc 13890899  T
Q  179 tggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    ||||| ||| | ||||||||||||| ||||||| ||||||  ||||||||| ||| || ||||||| |||||||| ||||||||| || ||||||    
T  13890898 tggagacggtgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 283
Target Start/End: Original strand, 26651076 - 26651279
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||| ||||||||| | |||||  ||| |||||||   |||||| ||  |||||||||| || |||||||||||| ||| |||||||||||||||    
T  26651076 gttttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtga-ctgggctgttttatc 26651174  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||| |||  | ||||||| || ||||| ||||||||| || ||| ||||||    
T  26651175 ctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactcaacccgataattc 26651273  T
Q  278 ctttgg 283  Q
    ||||||    
T  26651274 ctttgg 26651279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 80 - 282
Target Start/End: Complemental strand, 14582284 - 14582082
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    |||||||||||||||||| || |||||  ||| ||||||| |||||||| ||  ||| |||||| |  |||||||||||| |||||||| ||||||||||    
T  14582284 gttttaatcgaacgattaggctatatttagaggtgtatat-ctcgagcgattgtatattgtgcagtgtataatcgtaacagtgatctggactgttttatc 14582186  T
Q  178 ctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaattc 277  Q
    |||||| ||| | ||||||||||||| ||||||| |||| |  |||||||||||||  | ||||||| ||||||||  |||| ||| || ||| ||||||    
T  14582185 ctggagacggtgtggttgttagtctaccttgcac-aactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactcaacccgataattc 14582087  T
Q  278 ctttg 282  Q
    |||||    
T  14582086 ctttg 14582082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 39747155 - 39747295
Alignment:
Q  159 tgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcg 258  Q
    ||||||||||||||||||||||||| || || ||||| ||||||| ||||||||| ||||  ||||||||||||| || ||||||| ||| |||| ||||    
T  39747155 tgatctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcg 39747253  T
Q  259 tgacttaaaccggtaattcctttggtagtagttctgattttt 300  Q
    ||||| || ||| |||||||||||| | || |||||||||||    
T  39747254 tgactcaacccgataattcctttggcactacttctgattttt 39747295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 11251105 - 11251206
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  11251105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 11251203  T
Q  261 act 263  Q
    |||    
T  11251204 act 11251206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 37404408 - 37404509
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  37404408 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 37404506  T
Q  261 act 263  Q
    |||    
T  37404507 act 37404509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 37409529 - 37409630
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||  ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  37409529 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 37409627  T
Q  261 act 263  Q
    |||    
T  37409628 act 37409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 36684707 - 36684808
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  36684707 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 36684804  T
Q  260 gact 263  Q
    ||||    
T  36684805 gact 36684808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 3584704 - 3584603
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| || ||   |||| |||||||| || ||||||| |||||||| ||||||    
T  3584704 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtg 3584606  T
Q  261 act 263  Q
    |||    
T  3584605 act 3584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 5725082 - 5724981
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  5725082 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 5724984  T
Q  261 act 263  Q
    |||    
T  5724983 act 5724981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 300
Target Start/End: Original strand, 19422784 - 19423008
Alignment:
Q  80 gttttaatcgaacgattaagccatatt--gagttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgttttatc 177  Q
    ||||||||||| ||||||| | |||||  ||| ||||||| |||||||| ||  |||| ||||| |  |||||||||| | ||||||||||| |||||||    
T  19422784 gttttaatcgatcgattaaactatattttgaggtgtatat-ctcgagcgattgtataccgtgcagtgtataatcgtaatagtgatctgggctattttatc 19422882  T
Q  178 ctggaggcggcgcggttgttagtctatct----tgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggta 273  Q
    ||||||  ||||  |||||||||||| ||    ||||||| ||||  |||||| |||||| || ||||||| ||||| ||  |||||||| || || |||    
T  19422883 ctggagatggcgtagttgttagtctacctaccttgcacaa-cttgggtagtgcagcgaaacgtcttaaagagagcgatctgatcgtgactcaacccagta 19422981  T
Q  274 attcctttggtagtagttctgattttt 300  Q
    |||||||||  |||| |||||||||||    
T  19422982 attcctttgccagtacttctgattttt 19423008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 27716546 - 27716445
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  27716546 atctgggctgttttatcctggagacgacgctgttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 27716448  T
Q  261 act 263  Q
    |||    
T  27716447 act 27716445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 19422683 - 19422752
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||    
T  19422683 tctcttctcccttcgacttgtgttaacgagtcactcttgtgcttctactcctttctgtccctttcggttt 19422752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 19799013 - 19799107
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  ||| |||||||| ||||| || ||||||| ||||| ||  ||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgact 19799107  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 48246675 - 48246756
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaag 243  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||    
T  48246675 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaag 48246756  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 34318219 - 34318317
Alignment:
Q  164 tgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||| | ||||||||    
T  34318219 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgac 34318316  T

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Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 39747092 - 39747148
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  39747092 tctcttctcccttcgacttgtgttaacgagtcattcttctgct---actcctttctgtcc 39747148  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 5730208 - 5730107
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||| ||||||| || ||   |||| |||||||| || ||||||| |||||||| ||||||    
T  5730208 atctgtgctgttttatcctggagacggtgcggttgctagtctaccttgcac-aatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtg 5730110  T
Q  261 act 263  Q
    |||    
T  5730109 act 5730107  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 16035703 - 16035609
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||  ||| | |||||| ||||| || |||||||  ||||||| |||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgact 16035609  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 16649613 - 16649706
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||  ||| | |||||| | ||| || ||||||| |||||||| |||||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgact 16649706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 41097946 - 41098055
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||    
T  41097946 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 41098044  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  41098045 tcaacccggta 41098055  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 47455386 - 47455480
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||  ||| | | |||| ||||| || ||||||| |||||||| |||||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgact 47455480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 14582385 - 14582316
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttt 83  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| ||| |||||| | |||||||||||    
T  14582385 tctcttctcccttcgatttgtgttaacgagtcattcttcggcttctacttctttctatccctttcggttt 14582316  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 33301180 - 33301272
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtga 261  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  |||   |||||| ||||| || ||||||| | |||||| |||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtga 33301272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 13891097 - 13891060
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13891097 tctcttctcccttcgacttgtgttaacgagtcattctt 13891060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 25188240 - 25188336
Alignment:
Q  137 gtgcactacataatcgtaacat-tgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaa 233  Q
    ||||| |||||||||| ||||| ||| ||| | ||||||||| ||||| || | |||||||||||||| ||||||||||||  | |||||||||||||    
T  25188240 gtgcaatacataatcg-aacatgtgaactgagttgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaa 25188336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 33055139 - 33055087
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaact 216  Q
    ||||||||||||||||||||||| || |||||| ||||||| ||||||||||||    
T  33055139 ctgggctgttttatcctggaggc-gcacggttgatagtctaccttgcacaaact 33055087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 38734559 - 38734522
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38734559 tctcttctcccttcgacttgtgttaacgagtcattctt 38734522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 524
Target Start/End: Complemental strand, 16979648 - 16979596
Alignment:
Q  472 atattgttggttgtgatttggttacggtgtaaaactttttacattgacagtgt 524  Q
    |||||||||||||||||||| | || ||||||| ||||||||| |||||||||    
T  16979648 atattgttggttgtgatttgttgacagtgtaaatctttttacactgacagtgt 16979596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 11387841 - 11387923
Alignment:
Q  180 ggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||| ||||||||||| ||||||| ||||||||| |||   ||||||||||||| || ||||| | |||||||| |||||||||    
T  11387841 ggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgact 11387923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 14724370 - 14724296
Alignment:
Q  143 tacataatcgtaacat-tgatctgggctgttttatcctggaggcgg-cgcggttgttagtctatcttgcacaaact 216  Q
    |||||||||| ||||| ||||||| | ||||||||||||||||||| | |||||||||||||| |||| |||||||    
T  14724370 tacataatcg-aacatgtgatctgtgttgttttatcctggaggcggtcacggttgttagtctaccttgtacaaact 14724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 10135551 - 10135457
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||| ||||||||| ||||| | ||||  |||||||||  ||   ||||||| ||||| || ||||||| |||||||| |||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 10135457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 10140184 - 10140090
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||| |||| |||| ||||| | ||||  |||||||||  |||| ||||||| ||||| || ||||||| ||||||||  ||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgact 10140090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 23192817 - 23192911
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    |||||||||||||||| |||| ||||| ||||||  |||| ||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 23192911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 266
Target Start/End: Original strand, 39588370 - 39588464
Alignment:
Q  172 tttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaa 266  Q
    ||||||||||||  |||| ||| | |||||| ||||||||||  ||| | |||||| ||||| || ||||||| ||||||||  |||||||||||    
T  39588370 tttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaa 39588464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 40166075 - 40165981
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||| |||||||||  |||||||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||| | |||||||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgact 40165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 47451225 - 47451319
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||| ||||||||||| ||||| |||||| ||||||||||  ||    ||||||  |||| || ||||||| |||||||| |||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgact 47451319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 10106386 - 10106349
Alignment:
Q  15 tctcttctccattcgacttgtgttaacgagtcattctt 52  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  10106386 tctcttctcccttcgacttctgttaacgagtcattctt 10106349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 17213954 - 17213995
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctt 67  Q
    |||||||||||||||||||||||||||||  ||| |||||||    
T  17213954 ttcgacttgtgttaacgagtcattcttctttttctactcctt 17213995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 132 - 303
Target Start/End: Original strand, 2735 - 2905
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| |  |||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||  ||||| | |||    
T  2735 atactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacga 2833  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
    || || |||||||  ||||||| ||||||||| || |||||||||||||| | |||| ||||||||| ||||    
T  2834 aacgtcttaaagagcgcgacctggtcgtgactcaacccggtaattccttttgcagtatttctgatttctaaa 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 132 - 303
Target Start/End: Original strand, 10695 - 10865
Alignment:
Q  132 atactgtgcactacataatcgtaacattgatctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcga 231  Q
    |||||||||| |  |||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||  ||||| | |||    
T  10695 atactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgtcacga 10793  T
Q  232 aatgttttaaagatagcgacctagtcgtgacttaaaccggtaattcctttggtagtagttctgatttttaaa 303  Q
    || || |||||||  ||||||| ||||||||| || |||||||||||||| | |||| ||||||||| ||||    
T  10794 aacgtcttaaagagcgcgacctggtcgtgactcaacccggtaattccttttgcagtatttctgatttctaaa 10865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 79 - 318
Target Start/End: Original strand, 33876 - 34119
Alignment:
Q  79 ggttttaatcgaacgattaagccatattg---agttgtatattctcgagcgtttacatactgtgcactacataatcgtaacattgatctgggctgtttta 175  Q
    ||||||||||||||||||||||||||||    || ||||||||||||| |  ||||||| |||||| ||| |||| | || | |||||| || |||||||    
T  33876 ggttttaatcgaacgattaagccatattttttaggtgtatattctcgaacaattacatattgtgcagtacgtaattgaaa-agtgatctaggttgtttta 33974  T
Q  176 tcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgacttaaaccggtaat 275  Q
    ||||| ||| || |||||||||| |||| |||| ||||||||   ||||||||||||| || ||||||| |||||||| ||||||||| || ||| ||||    
T  33975 tcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccgataat 34074  T
Q  276 tcctttggtagtag-ttctga-tttttaaaacacgaaaacaacaa 318  Q
    |  || |||||||| |||| | ||||| ||||||||||| |||||    
T  34075 tttttcggtagtagtttctaatttttttaaacacgaaaataacaa 34119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 33788 - 33845
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcggttt 83  Q
    ||||||||||||| |||| || ||||||||||||  ||||||| ||||| ||||||||    
T  33788 ttcgacttgtgttgacgattccttcttctgcttctgctcctttttgtcccttcggttt 33845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 13732 - 13846
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  13732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 13830  T
Q  261 acttaaaccggtaatt 276  Q
    ||| |  |||||||||    
T  13831 actcaccccggtaatt 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 19187 - 19291
Alignment:
Q  161 atctgggctgttttatcctgga---ggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtc 257  Q
    ||||||||||||||||||||||   |||| |||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||| | |||    
T  19187 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtc 19285  T
Q  258 gtgact 263  Q
    ||||||    
T  19286 gtgact 19291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 31648 - 31547
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  31648 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 31550  T
Q  261 act 263  Q
    |||    
T  31549 act 31547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 26473 - 26424
Alignment:
Q  164 tgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  26473 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa 26424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 9200 - 9301
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||  ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  9200 atctgggctgttttatcctggagacggcgcggttgctagtcttccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 9298  T
Q  261 act 263  Q
    |||    
T  9299 act 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 3666 - 3565
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||  ||||||||||| ||||||| ||||||| |||||   ||||||||||||| || ||||||| |||||||| ||||||    
T  3666 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 3568  T
Q  261 act 263  Q
    |||    
T  3567 act 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 51; Significance: 6e-20; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 37113 - 37012
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtg 260  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  | |  ||||||||||||| || ||||||| |||||||| ||||||    
T  37113 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 37015  T
Q  261 act 263  Q
    |||    
T  37014 act 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 52894 - 53003
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||| ||  |||  ||||| || ||  ||| ||||||| ||||||||| |||||||    
T  52894 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcataattttgggtagtgtcgtgatttgtcttaaagaaagcgacctaatcgtgac 52992  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  52993 tcaatccggta 53003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 47851 - 47960
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    ||||||||||||||||| |||||  | |||||||||||||| |||||||||  |||  |||||||  ||  ||| ||| ||| |||||||| ||||||||    
T  47851 ctgggctgttttatccttgaggca-cacggttgttagtctaccttgcacaattttgggtagtgccctgatttgtcttatagaaagcgacctggtcgtgac 47949  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  47950 tcaacccggta 47960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 3161 - 3060
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  3161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 3064  T
Q  260 gact 263  Q
    ||||    
T  3063 gact 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 81374 - 81475
Alignment:
Q  161 atctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttga-atagtgccgcgaaatgttttaaagatagcgacctagtcgt 259  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || |  ||||||||||||| || ||||||| |||||||| |||||    
T  81374 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa--ttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 81471  T
Q  260 gact 263  Q
    ||||    
T  81472 gact 81475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 4169 - 4075
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| |||||||| ||||||| |||||||| |||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgact 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 7199 - 7105
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 9887 - 9981
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| ||||| || ||||||| |||||||| |||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgact 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 45885 - 45776
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||||||||||| |||||||| || |||||    
T  45885 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 45787  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  45786 tcaacccggta 45776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 152902 - 153011
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||||||||||| |||||||| || |||||    
T  152902 ctgggctgttttatcctggaggc-acacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 153000  T
Q  263 ttaaaccggta 273  Q
    | || ||||||    
T  153001 tcaacccggta 153011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 450 - 389
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgt-cctttcggttttaa 86  Q
    ||||||||||||| ||||||| |||||||  ||| |||||||||||| ||||||||||||||    
T  450 ttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcggttttaa 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 1220 - 1319
Alignment:
Q  163 ctgggctgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgac 262  Q
    ||||||||||||||| |||||||  | |||||||||||||| |||||||||  | |  |||||||| ||  ||| ||||||| |||||||| ||||||||    
T  1220 ctgggctgttttatcttggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 30848 - 30797
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcgg 80  Q
    |||||||||||||||||| |||||||  ||| |||||||||||||| |||||    
T  30848 gacttgtgttaacgagtctttcttctttttctactcctttctgtcccttcgg 30797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 30265 - 30214
Alignment:
Q  29 gacttgtgttaacgagtcattcttctgcttccactcctttctgtcctttcgg 80  Q
    |||||||||||||||||| |||||||  ||| |||||||||||||| |||||    
T  30265 gacttgtgttaacgagtctttcttctttttctactcctttctgtcccttcgg 30214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 166086 - 166180
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaaacttgaatagtgccgcgaaatgttttaaagatagcgacctagtcgtgact 263  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||  ||    |||||| ||||| || ||||||| |||||||| || ||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgact 166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 35729 - 35685
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 35685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 25494 - 25450
Alignment:
Q  169 tgttttatcctggaggcggcgcggttgttagtctatcttgcacaa 213  Q
    |||||||||||||| |||||| ||||| |||||| ||||||||||    
T  25494 tgttttatcctggacgcggcgtggttgatagtctgtcttgcacaa 25450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 193777 - 193825
Alignment:
Q  26 ttcgacttgtgttaacgagtcattcttctgcttccactcctttctgtcc 74  Q
    ||||||||||||| ||||||| |||||||  ||| ||||||||||||||    
T  193777 ttcgacttgtgttgacgagtctttcttctttttctactcctttctgtcc 193825  T

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