View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9448_low_23 (Length: 250)
Name: NF9448_low_23
Description: NF9448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9448_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 25014792 - 25014549
Alignment:
| Q |
7 |
tttggtgttcagataaccaggattcaatattnnnnnnnntattgatattgcggcctaaattgtagttgcaggtctttttcaaattccgcggtttaaccta |
106 |
Q |
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||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
25014792 |
tttggagttcggataaccaggattcaatattaaaaaaaatattgatattgcggcctaaattgcagttgcaggtctttttcaaattccgcggtttaaccta |
25014693 |
T |
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| Q |
107 |
atgagtgaaannnnnnnggttctttaatttctctattgtggaataatgctaatgttaagtgttaaatattgcagagacaagcagatgtgaattcactaat |
206 |
Q |
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|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
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| T |
25014692 |
atgagtgaaatttttttagttctttaatttctctatagtggaataatgctaatgttaagtgttaaattttgcagagacaagcagacgtgaattcactaat |
25014593 |
T |
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| Q |
207 |
gctgctattggcattgttatgccatttgcttccattgctattca |
250 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
25014592 |
gctgcttttggcattgttatgccatttgcttccattgctattca |
25014549 |
T |
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