View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9449_low_18 (Length: 244)
Name: NF9449_low_18
Description: NF9449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9449_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 7398759 - 7398983
Alignment:
| Q |
1 |
aacgttttacgacataatgtgccggaaaaatcacaaaaatacaggagttaaccaatgcccaaacagataataaaagtatgaactttcgccttcatccacc |
100 |
Q |
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| T |
7398759 |
aacgttttacgacataatgtgccggaaaaatcacaaaaacacaggagttaatcaatgcccaaacagataataaaagtatgaattttcaccttcatccacc |
7398858 |
T |
|
| Q |
101 |
aaaaagaaaaatgcttataagattaactaaccttcatcaacaaagatcttcatgttcaaaagattgcgaacacgagaatcatgaagaactagtatccctt |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
7398859 |
aaaaagaaaaatgcttaaaagattaactaaccttcatcaacaaagatcttcatgttcaaaagattgcggacacgagaatcatgaagaactagtatccctt |
7398958 |
T |
|
| Q |
201 |
ctaaaactatgatatctgcagggtg |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
7398959 |
ctaaaactatgatatctgcagggtg |
7398983 |
T |
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