View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9450_high_18 (Length: 215)
Name: NF9450_high_18
Description: NF9450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9450_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 38684006 - 38683819
Alignment:
| Q |
13 |
gagcagagaaaggtgttgagaagagggaagaaccaccaccgaaagcgggtgtagaagaagcaccaaaagcaggagttgaagaaggggtaccgaaacctgg |
112 |
Q |
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| T |
38684006 |
gagcagagaacggtgttgagaagagggaagaaccaccaccgaaagcgggtgtagaagaagcaccaaaagcaggagttgaagaaggggtaccgaaacctgg |
38683907 |
T |
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| Q |
113 |
ggtgctgaaagctggtgtggaagatggagtaccgaaggttggagtgccgaatgctgaagatggagttccgaagagggaagatgaagat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38683906 |
ggtgctgaaagctggtgtggaagatggagtaccgaaggttggagtgccgaatgctgaagatggagttccgaagagggaagatgaagat |
38683819 |
T |
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