View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9450_low_24 (Length: 325)

Name: NF9450_low_24
Description: NF9450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9450_low_24
NF9450_low_24
[»] chr3 (54 HSPs)
chr3 (1-319)||(16743990-16744309)
chr3 (1-268)||(13838962-13839232)
chr3 (62-268)||(14842487-14842693)
chr3 (62-268)||(2049941-2050147)
chr3 (62-268)||(12030073-12030279)
chr3 (1-194)||(17912483-17912676)
chr3 (132-316)||(19231982-19232169)
chr3 (29-194)||(2449238-2449404)
chr3 (1-231)||(15858986-15859219)
chr3 (1-204)||(51158008-51158213)
chr3 (148-268)||(19260749-19260869)
chr3 (1-187)||(15936634-15936822)
chr3 (62-194)||(13975722-13975853)
chr3 (62-194)||(45860937-45861068)
chr3 (62-194)||(13954890-13955021)
chr3 (233-311)||(15857120-15857198)
chr3 (236-316)||(3992873-3992953)
chr3 (1-187)||(15938476-15938664)
chr3 (236-316)||(55513193-55513273)
chr3 (236-316)||(2844514-2844594)
chr3 (236-316)||(54037976-54038056)
chr3 (236-316)||(17955832-17955916)
chr3 (236-316)||(7854305-7854385)
chr3 (62-182)||(55316351-55316471)
chr3 (236-297)||(45581954-45582016)
chr3 (70-269)||(15614973-15615170)
chr3 (62-182)||(41270207-41270327)
chr3 (1-160)||(16821207-16821369)
chr3 (137-178)||(14080715-14080756)
chr3 (252-309)||(17205019-17205076)
chr3 (236-309)||(38810868-38810941)
chr3 (254-309)||(12031849-12031904)
chr3 (115-268)||(54651642-54651796)
chr3 (236-309)||(13301323-13301396)
chr3 (236-309)||(13311979-13312052)
chr3 (252-309)||(17191879-17191936)
chr3 (236-268)||(2449152-2449184)
chr3 (236-268)||(16261777-16261809)
chr3 (236-268)||(16933869-16933901)
chr3 (236-268)||(17912398-17912430)
chr3 (236-268)||(23492696-23492728)
chr3 (236-268)||(38168237-38168269)
chr3 (236-268)||(53771365-53771397)
chr3 (252-309)||(3576290-3576347)
chr3 (237-302)||(15550922-15550987)
chr3 (236-268)||(11986080-11986112)
chr3 (115-187)||(11986173-11986245)
chr3 (236-268)||(13954804-13954836)
chr3 (236-268)||(14285289-14285321)
chr3 (236-268)||(19947026-19947058)
chr3 (236-268)||(30153265-30153297)
chr3 (236-268)||(33342204-33342236)
chr3 (236-268)||(45861122-45861154)
chr3 (236-268)||(51961031-51961063)
[»] chr1 (23 HSPs)
chr1 (62-319)||(41394353-41394610)
chr1 (62-268)||(20913161-20913367)
chr1 (62-268)||(20931476-20931682)
chr1 (29-194)||(51452589-51452755)
chr1 (1-268)||(20445747-20446019)
chr1 (62-268)||(20893551-20893758)
chr1 (98-268)||(37844374-37844546)
chr1 (1-268)||(20531512-20531783)
chr1 (236-316)||(21860334-21860414)
chr1 (236-310)||(44034829-44034903)
chr1 (62-269)||(45051554-45051759)
chr1 (62-182)||(2116386-2116506)
chr1 (63-267)||(22227941-22228146)
chr1 (63-267)||(22232638-22232843)
chr1 (202-309)||(27675086-27675191)
chr1 (236-316)||(41218728-41218808)
chr1 (62-182)||(5072388-5072508)
chr1 (62-182)||(18601118-18601238)
chr1 (252-309)||(13376711-13376768)
chr1 (252-309)||(20177513-20177570)
chr1 (236-267)||(15861327-15861358)
chr1 (137-178)||(22143361-22143402)
chr1 (236-268)||(51452809-51452841)
[»] chr2 (34 HSPs)
chr2 (62-316)||(20627190-20627445)
chr2 (1-316)||(19794581-19794899)
chr2 (1-268)||(462806-463075)
chr2 (62-316)||(43642833-43643089)
chr2 (1-268)||(36982364-36982636)
chr2 (1-268)||(8891310-8891581)
chr2 (29-194)||(19689401-19689567)
chr2 (29-194)||(23820168-23820334)
chr2 (29-194)||(14906440-14906606)
chr2 (29-194)||(20015108-20015274)
chr2 (1-268)||(24341309-24341584)
chr2 (62-194)||(25265390-25265522)
chr2 (62-194)||(17396653-17396784)
chr2 (172-268)||(22863169-22863267)
chr2 (236-316)||(22275045-22275125)
chr2 (236-316)||(22284278-22284358)
chr2 (237-316)||(15633538-15633617)
chr2 (63-144)||(7507894-7507975)
chr2 (62-182)||(19886661-19886781)
chr2 (252-309)||(43646232-43646289)
chr2 (236-269)||(19689314-19689347)
chr2 (236-268)||(9652796-9652828)
chr2 (236-268)||(14906354-14906386)
chr2 (257-309)||(19660221-19660273)
chr2 (236-268)||(23820388-23820420)
chr2 (236-267)||(25213372-25213403)
chr2 (236-309)||(19666848-19666921)
chr2 (252-309)||(25305769-25305826)
chr2 (202-309)||(31146032-31146138)
chr2 (236-268)||(7507757-7507789)
chr2 (236-268)||(17396567-17396599)
chr2 (236-268)||(20015328-20015360)
chr2 (236-268)||(28031134-28031166)
chr2 (236-268)||(33128372-33128404)
[»] chr8 (32 HSPs)
chr8 (1-194)||(22907214-22907408)
chr8 (62-316)||(16404852-16405107)
chr8 (62-268)||(16193643-16193848)
chr8 (62-268)||(24928716-24928923)
chr8 (29-194)||(5238184-5238350)
chr8 (29-194)||(24661248-24661414)
chr8 (29-194)||(43685643-43685809)
chr8 (62-268)||(43373392-43373600)
chr8 (62-194)||(17345700-17345832)
chr8 (236-316)||(274766-274846)
chr8 (236-316)||(641003-641083)
chr8 (236-316)||(826809-826889)
chr8 (62-182)||(6774258-6774378)
chr8 (236-316)||(24716714-24716794)
chr8 (62-178)||(21844576-21844692)
chr8 (62-182)||(24549113-24549233)
chr8 (62-178)||(21851969-21852085)
chr8 (62-182)||(30120854-30120974)
chr8 (236-316)||(39115598-39115678)
chr8 (62-182)||(16674392-16674512)
chr8 (252-309)||(17285543-17285600)
chr8 (252-309)||(21198005-21198062)
chr8 (236-268)||(5238404-5238436)
chr8 (236-268)||(22907128-22907160)
chr8 (236-268)||(24385652-24385684)
chr8 (236-268)||(24661162-24661194)
chr8 (236-268)||(43685863-43685895)
chr8 (137-178)||(23149985-23150026)
chr8 (137-178)||(23226076-23226117)
chr8 (236-268)||(2545265-2545297)
chr8 (236-268)||(3431176-3431208)
chr8 (236-268)||(22886654-22886686)
[»] chr4 (28 HSPs)
chr4 (1-194)||(26680269-26680463)
chr4 (62-316)||(54118120-54118376)
chr4 (62-268)||(122020-122226)
chr4 (1-268)||(13246498-13246769)
chr4 (29-194)||(10488659-10488825)
chr4 (29-194)||(16327926-16328092)
chr4 (1-268)||(15675009-15675284)
chr4 (1-268)||(10104170-10104445)
chr4 (132-268)||(33240901-33241043)
chr4 (62-194)||(13048221-13048353)
chr4 (236-316)||(25119059-25119139)
chr4 (1-167)||(31115697-31115865)
chr4 (1-178)||(10644287-10644467)
chr4 (236-316)||(5682380-5682460)
chr4 (162-268)||(31132545-31132657)
chr4 (62-182)||(47357786-47357906)
chr4 (69-178)||(40885570-40885680)
chr4 (236-309)||(41165808-41165881)
chr4 (252-309)||(47534933-47534990)
chr4 (236-268)||(14952085-14952117)
chr4 (236-268)||(15135907-15135939)
chr4 (236-268)||(15272211-15272243)
chr4 (236-268)||(16327840-16327872)
chr4 (236-268)||(16609013-16609045)
chr4 (236-268)||(26680517-26680549)
chr4 (236-268)||(8045272-8045304)
chr4 (137-177)||(13809511-13809551)
chr4 (236-268)||(16523146-16523178)
[»] chr7 (44 HSPs)
chr7 (1-309)||(3060034-3060344)
chr7 (1-194)||(7293085-7293279)
chr7 (62-268)||(16211897-16212103)
chr7 (29-194)||(11516324-11516490)
chr7 (29-194)||(15441564-15441730)
chr7 (29-194)||(30262129-30262295)
chr7 (62-268)||(13036938-13037146)
chr7 (1-268)||(11580661-11580934)
chr7 (62-268)||(36052795-36053003)
chr7 (1-194)||(47481031-47481226)
chr7 (62-187)||(18253842-18253967)
chr7 (62-194)||(25292338-25292470)
chr7 (236-316)||(32493898-32493978)
chr7 (69-193)||(13321152-13321278)
chr7 (62-176)||(16478968-16479082)
chr7 (236-316)||(126738-126818)
chr7 (62-178)||(13572808-13572924)
chr7 (236-316)||(1936869-1936949)
chr7 (66-266)||(295893-296094)
chr7 (236-316)||(111121-111201)
chr7 (62-182)||(10989541-10989661)
chr7 (63-183)||(2437590-2437710)
chr7 (202-309)||(13377819-13377924)
chr7 (70-182)||(13911024-13911136)
chr7 (237-316)||(7283908-7283987)
chr7 (152-194)||(14113989-14114031)
chr7 (152-194)||(14423639-14423681)
chr7 (252-309)||(13389693-13389750)
chr7 (162-268)||(36024372-36024485)
chr7 (236-268)||(2029244-2029276)
chr7 (236-268)||(7293333-7293365)
chr7 (236-268)||(11516544-11516576)
chr7 (236-268)||(14113903-14113935)
chr7 (236-268)||(15441478-15441510)
chr7 (199-268)||(15709428-15709501)
chr7 (253-309)||(16919870-16919926)
chr7 (236-268)||(30262043-30262075)
chr7 (236-268)||(42056188-42056220)
chr7 (236-268)||(371417-371449)
chr7 (236-268)||(3049905-3049937)
chr7 (236-268)||(13321334-13321366)
chr7 (236-264)||(15516765-15516793)
chr7 (236-268)||(25124450-25124482)
chr7 (236-268)||(47480944-47480976)
[»] scaffold0266 (2 HSPs)
scaffold0266 (62-268)||(1255-1462)
scaffold0266 (62-268)||(3508-3714)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-194)||(37066-37260)
scaffold0078 (236-316)||(41632-41712)
scaffold0078 (236-268)||(36980-37012)
[»] scaffold0023 (3 HSPs)
scaffold0023 (62-268)||(48729-48935)
scaffold0023 (62-160)||(36225-36323)
scaffold0023 (236-268)||(61122-61154)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-268)||(171973-172242)
scaffold0001 (1-268)||(177676-177945)
[»] scaffold0018 (1 HSPs)
scaffold0018 (62-266)||(51110-51314)
[»] scaffold0106 (1 HSPs)
scaffold0106 (3-268)||(41799-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (62-268)||(882-1088)
[»] chr5 (34 HSPs)
chr5 (62-268)||(23507096-23507302)
chr5 (29-194)||(20623066-20623232)
chr5 (29-194)||(21233528-21233694)
chr5 (1-268)||(27182471-27182742)
chr5 (32-194)||(37052844-37053007)
chr5 (29-194)||(16536294-16536460)
chr5 (1-268)||(18530988-18531262)
chr5 (1-268)||(22053753-22054028)
chr5 (29-192)||(25900408-25900571)
chr5 (62-194)||(34939408-34939540)
chr5 (62-182)||(29188284-29188404)
chr5 (64-178)||(27009975-27010089)
chr5 (1-182)||(4199985-4200169)
chr5 (62-179)||(43443398-43443515)
chr5 (62-182)||(19500031-19500151)
chr5 (62-182)||(22366481-22366601)
chr5 (62-182)||(25426760-25426880)
chr5 (237-311)||(11584374-11584448)
chr5 (62-179)||(18777995-18778112)
chr5 (62-182)||(12506-12626)
chr5 (62-182)||(21073595-21073715)
chr5 (236-309)||(5450695-5450768)
chr5 (252-309)||(21222462-21222519)
chr5 (236-268)||(16105967-16105999)
chr5 (236-268)||(20623286-20623318)
chr5 (236-268)||(21233442-21233474)
chr5 (236-268)||(25900320-25900352)
chr5 (236-268)||(37053061-37053093)
chr5 (137-178)||(21310709-21310750)
chr5 (137-178)||(23981516-23981557)
chr5 (236-268)||(108728-108760)
chr5 (236-268)||(9730278-9730310)
chr5 (236-268)||(16536514-16536546)
chr5 (115-187)||(32950879-32950951)
[»] scaffold0413 (1 HSPs)
scaffold0413 (62-268)||(5990-6196)
[»] scaffold0195 (2 HSPs)
scaffold0195 (1-265)||(19274-19543)
scaffold0195 (1-194)||(21358-21553)
[»] scaffold0077 (2 HSPs)
scaffold0077 (5-269)||(36836-37104)
scaffold0077 (237-316)||(15319-15398)
[»] chr6 (32 HSPs)
chr6 (62-268)||(23153578-23153786)
chr6 (63-267)||(14626045-14626249)
chr6 (62-194)||(1657748-1657880)
chr6 (62-194)||(15862602-15862734)
chr6 (62-194)||(35009439-35009571)
chr6 (199-268)||(23148266-23148335)
chr6 (236-316)||(19983144-19983224)
chr6 (236-316)||(35015009-35015089)
chr6 (62-269)||(1650020-1650225)
chr6 (236-316)||(18583640-18583720)
chr6 (111-194)||(27751605-27751688)
chr6 (62-182)||(25175695-25175815)
chr6 (62-182)||(27653983-27654103)
chr6 (252-309)||(21623506-21623563)
chr6 (62-182)||(16825752-16825874)
chr6 (252-309)||(22361619-22361676)
chr6 (97-194)||(29666040-29666137)
chr6 (237-309)||(14152632-14152704)
chr6 (236-268)||(18002395-18002427)
chr6 (236-268)||(23995247-23995279)
chr6 (236-268)||(26090059-26090091)
chr6 (236-267)||(4991396-4991427)
chr6 (238-268)||(15742120-15742150)
chr6 (137-178)||(16887792-16887833)
chr6 (137-178)||(33324898-33324939)
chr6 (137-178)||(35136013-35136054)
chr6 (236-268)||(1657661-1657693)
chr6 (236-268)||(15862789-15862821)
chr6 (236-268)||(18823283-18823315)
chr6 (236-268)||(18839138-18839170)
chr6 (236-268)||(27751742-27751774)
chr6 (236-268)||(32276659-32276691)
[»] scaffold0162 (3 HSPs)
scaffold0162 (64-268)||(26340-26545)
scaffold0162 (62-194)||(8180-8312)
scaffold0162 (252-309)||(6877-6934)
[»] scaffold0012 (2 HSPs)
scaffold0012 (62-268)||(247366-247574)
scaffold0012 (236-268)||(34075-34107)
[»] scaffold0302 (1 HSPs)
scaffold0302 (62-268)||(12244-12450)
[»] scaffold0141 (4 HSPs)
scaffold0141 (29-194)||(26892-27058)
scaffold0141 (29-187)||(22637-22796)
scaffold0141 (236-268)||(22857-22889)
scaffold0141 (236-268)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (29-194)||(1582-1748)
scaffold0124 (236-268)||(1496-1528)
[»] scaffold0008 (2 HSPs)
scaffold0008 (62-268)||(128095-128301)
scaffold0008 (70-160)||(31697-31787)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-268)||(272093-272362)
[»] scaffold0028 (4 HSPs)
scaffold0028 (62-268)||(89378-89586)
scaffold0028 (143-268)||(107708-107835)
scaffold0028 (236-267)||(130880-130911)
scaffold0028 (137-178)||(79745-79786)
[»] scaffold0218 (1 HSPs)
scaffold0218 (62-258)||(4996-5193)
[»] scaffold0498 (1 HSPs)
scaffold0498 (62-268)||(9009-9215)
[»] scaffold0011 (1 HSPs)
scaffold0011 (62-268)||(123087-123296)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-268)||(8917-9192)
scaffold0025 (168-268)||(146838-146938)
scaffold0025 (62-220)||(148852-149012)
[»] scaffold0772 (2 HSPs)
scaffold0772 (62-187)||(5660-5785)
scaffold0772 (236-268)||(5846-5878)
[»] scaffold0132 (3 HSPs)
scaffold0132 (62-194)||(13637-13769)
scaffold0132 (236-316)||(42677-42754)
scaffold0132 (236-268)||(13824-13856)
[»] scaffold0049 (2 HSPs)
scaffold0049 (62-187)||(48318-48443)
scaffold0049 (237-316)||(20493-20572)
[»] scaffold1542 (1 HSPs)
scaffold1542 (64-194)||(534-664)
[»] scaffold0125 (2 HSPs)
scaffold0125 (63-194)||(41780-41911)
scaffold0125 (228-268)||(41957-41997)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-187)||(107815-108003)
scaffold0026 (62-178)||(64527-64648)
scaffold0026 (137-179)||(89863-89905)
[»] scaffold0034 (1 HSPs)
scaffold0034 (236-316)||(80187-80267)
[»] scaffold0075 (1 HSPs)
scaffold0075 (64-194)||(34460-34590)
[»] scaffold0016 (3 HSPs)
scaffold0016 (235-316)||(166116-166197)
scaffold0016 (235-310)||(162036-162111)
scaffold0016 (236-309)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (236-316)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (236-310)||(5735-5809)
scaffold0686 (236-310)||(5941-6015)
[»] scaffold0529 (1 HSPs)
scaffold0529 (62-183)||(3094-3215)
[»] scaffold0420 (1 HSPs)
scaffold0420 (62-182)||(13325-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (62-178)||(167-283)
scaffold0116 (236-316)||(30417-30497)
[»] scaffold0215 (2 HSPs)
scaffold0215 (62-160)||(9371-9469)
scaffold0215 (62-160)||(16269-16367)
[»] scaffold0342 (1 HSPs)
scaffold0342 (235-316)||(304-385)
[»] scaffold0076 (1 HSPs)
scaffold0076 (62-159)||(43129-43226)
[»] scaffold0022 (2 HSPs)
scaffold0022 (63-144)||(5254-5335)
scaffold0022 (137-177)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (62-182)||(1304-1424)
[»] scaffold1164 (1 HSPs)
scaffold1164 (237-316)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (237-316)||(19802-19881)
scaffold0122 (237-316)||(24106-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (62-160)||(14083-14181)
scaffold0139 (65-183)||(21115-21233)
[»] scaffold0876 (1 HSPs)
scaffold0876 (237-307)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (237-311)||(6261-6335)
scaffold0310 (237-274)||(4-41)
[»] scaffold0361 (1 HSPs)
scaffold0361 (111-194)||(3370-3453)
[»] scaffold0369 (1 HSPs)
scaffold0369 (63-144)||(3854-3936)
[»] scaffold0507 (1 HSPs)
scaffold0507 (236-309)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (252-309)||(35816-35873)
[»] scaffold1295 (1 HSPs)
scaffold1295 (252-309)||(442-499)
[»] scaffold0456 (2 HSPs)
scaffold0456 (137-178)||(1546-1587)
scaffold0456 (137-178)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (137-178)||(8216-8257)
[»] scaffold0084 (1 HSPs)
scaffold0084 (69-187)||(56106-56226)
[»] scaffold0058 (2 HSPs)
scaffold0058 (137-178)||(70307-70348)
scaffold0058 (236-268)||(57392-57424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (252-309)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (236-269)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (236-268)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (236-268)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (236-268)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (236-268)||(13285-13317)
[»] scaffold0032 (3 HSPs)
scaffold0032 (236-268)||(55904-55936)
scaffold0032 (236-268)||(108075-108107)
scaffold0032 (137-178)||(93773-93814)
[»] scaffold0207 (1 HSPs)
scaffold0207 (225-268)||(18015-18058)
[»] scaffold0409 (2 HSPs)
scaffold0409 (140-178)||(1348-1386)
scaffold0409 (140-178)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (252-309)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (252-309)||(6999-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (137-178)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (252-309)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (252-309)||(31357-31414)
[»] scaffold0389 (1 HSPs)
scaffold0389 (137-177)||(10868-10908)
[»] scaffold0367 (1 HSPs)
scaffold0367 (236-268)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (236-268)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (236-268)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (236-268)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (236-268)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (236-268)||(34308-34340)
[»] scaffold0066 (1 HSPs)
scaffold0066 (236-268)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (236-268)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 16744309 - 16743990
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  16744309 aacatcaattgcacaagaatcatagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaa 16744210  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatca 199  Q
     ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16744209 aatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatca 16744110  T
Q  200 aaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcact 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  16744109 aaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcact 16744010  T
Q  300 ttagctcctatgcttctcca 319  Q
    |||||||||||| |||||||    
T  16744009 ttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 13838962 - 13839232
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  13838962 aacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 13839061  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| | |||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  13839062 acatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatc 13839161  T
Q  199 aaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13839162 aaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 14842693 - 14842487
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||  ||||||||||||||||||||||||||||     
T  14842693 gcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcac 14842594  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||    
T  14842593 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaaccccct 14842494  T
Q  262 tacctta 268  Q
    |||||||    
T  14842493 tacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 2049941 - 2050147
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccct 2050140  T
Q  262 tacctta 268  Q
    |||||||    
T  2050141 tacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 12030279 - 12030073
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || |||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaaccccct 12030080  T
Q  262 tacctta 268  Q
    |||||||    
T  12030079 tacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 17912676 - 17912483
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    |||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||    
T  17912676 aacatcgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaa 17912577  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912576 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  132 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 228  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  229 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15859219 - 15858986
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |    
T  15859219 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttga 15859120  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  15859119 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatg 15859020  T
Q  198 -caaaattcatacaacatttgaaaatttacaaaat 231  Q
      ||||||||||||||| ||| |||||||||||||    
T  15859019 caaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 51158213 - 51158008
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |    
T  51158213 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 51158114  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |    
T  51158113 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagc 51158014  T
Q  199 aaaatt 204  Q
    ||||||    
T  51158013 aaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 268
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  148 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 247  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  248 aagactaacccccttacctta 268  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 15936822 - 15936634
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |    
T  15936822 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttga 15936723  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15936722 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  233 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 311  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 15938664 - 15938476
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |    
T  15938664 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttga 15938565  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||| ||| | ||||||||||||||| |||| |||||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
T  15938564 acatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  236 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 297  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 15614973 - 15615170
Alignment:
Q  70 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 169  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||| || || |||  |||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  170 cacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    ||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||||||||||    
T  15615073 cacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttacctta 15615169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16821207 - 16821369
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| |||||||||     
T  16821207 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttg 16821306  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    |||||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  16821307 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  254 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 268
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  115 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 213  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  214 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 302  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
Q  115 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986245 acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 62 - 319
Target Start/End: Original strand, 41394353 - 41394610
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| |||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 41394552  T
Q  262 taccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41394553 taccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 20913161 - 20913367
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  20913261 agttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaaccccct 20913360  T
Q  262 tacctta 268  Q
    |||||||    
T  20913361 tacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 20931476 - 20931682
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  20931476 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20931575  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||    
T  20931576 agttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaaccccct 20931675  T
Q  262 tacctta 268  Q
    |||||||    
T  20931676 tacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 20445747 - 20446019
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |    
T  20445747 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttga 20445846  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||     
T  20445847 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatg 20445946  T
Q  198 -caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20445947 caaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 20893758 - 20893551
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||     
T  20893758 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 20893659  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20893658 agttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaacccc 20893560  T
Q  260 cttacctta 268  Q
    |||||||||    
T  20893559 cttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 98 - 268
Target Start/End: Complemental strand, 37844546 - 37844374
Alignment:
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 197  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  198 c--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 20531512 - 20531783
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |    
T  20531512 aacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttga 20531611  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||     
T  20531612 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatg 20531711  T
Q  198 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||    
T  20531712 caaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 310  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 269
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  162 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  261 ttaccttaa 269  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 2116386 - 2116506
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  162 agttggagcacgaatttagca 182  Q
    |||   ||||||||| |||||    
T  2116486 agtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 22227941 - 22228146
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 162  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  163 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22228041 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22228140  T
Q  262 tacctt 267  Q
    ||||||    
T  22228141 tacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 22232638 - 22232843
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 162  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||| |  || ||| ||||| |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  163 gttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||    
T  22232738 gcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaaccccct 22232837  T
Q  262 tacctt 267  Q
    ||||||    
T  22232838 tacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  202 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 301  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  302 agctccta 309  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  236 atgattatgataaagactaacccccttacctt 267  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 62 - 316
Target Start/End: Complemental strand, 20627445 - 20627190
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| |||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||     
T  20627345 agttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccg 20627246  T
Q  261 ttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627245 ttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 19794899 - 19794581
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  19794899 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 19794800  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||     
T  19794799 acatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatg 19794700  T
Q  198 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttc 296  Q
      ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19794699 caaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttc 19794601  T
Q  297 actttagctcctatgcttct 316  Q
    ||||| |||| |||| ||||    
T  19794600 acttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 462806 - 463075
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| |||||||||     
T  462806 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttg 462904  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 197  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||     
T  462905 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataag 463004  T
Q  198 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  463005 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 62 - 316
Target Start/End: Complemental strand, 43643089 - 43642833
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  43643089 gcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 43642990  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  43642989 aattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctc 43642890  T
Q  260 cttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642889 cttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 36982636 - 36982364
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |    
T  36982636 aacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 36982537  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | |||| ||||| |||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  36982536 acatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatg 36982437  T
Q  198 -caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36982436 caaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 8891310 - 8891581
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  8891310 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 8891409  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||     
T  8891410 acatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatg 8891509  T
Q  198 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8891510 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 24341584 - 24341309
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |    
T  24341584 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 24341485  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 196  Q
    ||||  ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||     
T  24341484 acatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattat 24341385  T
Q  197 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  24341384 gaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 25265522 - 25265390
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  25265522 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaa 25265423  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||||| ||||||    
T  25265422 agttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  172 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 7507975 - 7507894
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 144  Q
    ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaa 269  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  257 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  236 atgattatgataaagactaacccccttacctt 267  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  202 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 300  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  301 tagctccta 309  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 22907408 - 22907214
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  22907408 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaa 22907309  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907308 catgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 62 - 316
Target Start/End: Complemental strand, 16405107 - 16404852
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  16405107 gcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 16405008  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  16405007 agttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccc 16404909  T
Q  260 cttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404908 cttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 16193848 - 16193643
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||||||||||     
T  16193848 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcat 16193749  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  16193748 agttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-cccct 16193650  T
Q  262 tacctta 268  Q
    |||||||    
T  16193649 tacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 24928923 - 24928716
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||     
T  24928823 agttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaacccca 24928724  T
Q  261 ttacctta 268  Q
    ||||||||    
T  24928723 ttacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 43373600 - 43373392
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| ||||||||     
T  43373600 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 43373501  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  43373500 agttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccc 43373401  T
Q  260 cttacctta 268  Q
    |||||||||    
T  43373400 cttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 17345700 - 17345832
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| |||||||||||| |||||||| ||||||    
T  17345800 agttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  162 agttggagcacgaatttagca 182  Q
    |||  |||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  162 agttggagcacgaattt 178  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  162 agttggagcacgaatttagca 182  Q
    |||  |||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  162 agttggagcacgaattt 178  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 26680269 - 26680463
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||    
T  26680269 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaa 26680368  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680369 catgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 62 - 316
Target Start/End: Complemental strand, 54118376 - 54118120
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  54118376 gcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 54118277  T
Q  162 agttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  54118276 aattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccc 54118177  T
Q  260 cttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118176 cttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  262 tacctta 268  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 13246498 - 13246769
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  13246498 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 13246597  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| | ||||||||||||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||     
T  13246598 acatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatg 13246697  T
Q  199 --aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246698 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15675284 - 15675009
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |    
T  15675284 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 15675185  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 196  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||     
T  15675184 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattat 15675085  T
Q  197 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  15675084 gaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 10104445 - 10104170
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |    
T  10104445 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 10104346  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 196  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||  ||     
T  10104345 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaattat 10104246  T
Q  197 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104245 gaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  132 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  230 ----atgatgatgattatgataaagactaacccccttacctta 268  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||| ||||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 31115697 - 31115865
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |    
T  31115697 aacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatgga 31115796  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 167  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  31115797 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 10644287 - 10644467
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||     
T  10644287 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttg 10644386  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10644387 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  162 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 255  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  256 cccccttacctta 268  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 47357786 - 47357906
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||| |||||||||||||||| |||||     
T  47357786 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcac 47357885  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  47357886 agcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 40885680 - 40885570
Alignment:
Q  69 tttcataacttctcatttctacata-tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 167  Q
    |||||||||||  ||||| |||||| ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || ||||||    
T  40885680 tttcataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttgg 40885581  T
Q  168 agcacgaattt 178  Q
    || ||||||||    
T  40885580 agtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 177  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 3060034 - 3060344
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| |||||||  || |||||||| || || |||||| |||||||||     
T  3060034 aacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttg 3060132  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 197  Q
    |||||| ||| | ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||     
T  3060133 aacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataag 3060232  T
Q  198 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttca 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  3060233 caaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttca 3060332  T
Q  298 ctttagctccta 309  Q
    |||| |||||||    
T  3060333 cttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 7293085 - 7293279
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  7293085 aacatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaa 7293184  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293185 catgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 16211897 - 16212103
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16211997 agttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccct 16212096  T
Q  262 tacctta 268  Q
    |||||||    
T  16212097 tacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 13037146 - 13036938
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||     
T  13037146 gcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13037047  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  13037046 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccc 13036947  T
Q  260 cttacctta 268  Q
    |||||||||    
T  13036946 cttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 11580934 - 11580661
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  11580934 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 11580835  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||     
T  11580834 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatg 11580735  T
Q  198 --caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 268  Q
       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11580734 caaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 36052795 - 36053003
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccc 36052994  T
Q  260 cttacctta 268  Q
    |||||||||    
T  36052995 cttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 47481226 - 47481031
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| ||| |||  ||||||||||| ||||| |||||| |||||||||     
T  47481226 aacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttg 47481128  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
T  47481127 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 18253967 - 18253842
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  18253967 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 18253868  T
Q  162 agttggagcacgaatttagcaacaat 187  Q
    ||||||||||||||||||| ||||||    
T  18253867 agttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 13321152 - 13321278
Alignment:
Q  69 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 166  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||     
T  13321152 tttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtta 13321251  T
Q  167 gagcacgaatttagcaacaatcatcca 193  Q
    ||||||||||||||||||||| |||||    
T  13321252 gagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 16479082 - 16478968
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||      
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgc 16478983  T
Q  162 agttggagcacgaat 176  Q
    |||  ||||||||||    
T  16478982 agtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 178
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  162 agttggagcacgaattt 178  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 266
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  66 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 165  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  166 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 263  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  264 cct 266  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 162  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  163 gttggagcacgaatttagcaa 183  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  202 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 301  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  302 agctccta 309  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  70 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 169  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  170 cacgaatttagca 182  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  152 atatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  152 atatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  162 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 255  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  256 -cccccttacctta 268  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  199 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  253 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  236 atgattatgataaagactaacccccttac 264  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 1255 - 1462
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1255 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaa 1354  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1355 agttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaaccccc 1454  T
Q  261 ttacctta 268  Q
    ||||||||    
T  1455 ttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 3714 - 3508
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  3714 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 3615  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  3614 agttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaaccccct 3515  T
Q  262 tacctta 268  Q
    |||||||    
T  3514 tacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 151; Significance: 7e-80; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 37260 - 37066
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| |||    
T  37260 aacatcaattgcacaagaatcatagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaa 37161  T
Q  100 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37160 catgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 151; Significance: 7e-80; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 48729 - 48935
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 48928  T
Q  262 tacctta 268  Q
    |||||||    
T  48929 tacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 36225 - 36323
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 146; Significance: 7e-77; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 171973 - 172242
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  171973 aacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 172072  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||    
T  172073 acatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc 172172  T
Q  199 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172173 aaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 177676 - 177945
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  177676 aacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 177775  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||    
T  177776 acatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc 177875  T
Q  199 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177876 aaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 62 - 266
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  262 tacct 266  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 3 - 268
Target Start/End: Original strand, 41799 - 42066
Alignment:
Q  3 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaac 100  Q
    ||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |    
T  41799 catcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagc 41898  T
Q  101 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaa 200  Q
    ||| ||| | |||||||||   ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  41899 atgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaa 41998  T
Q  201 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41999 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 1088 - 882
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  1088 gcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 989  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| |||||||||||||||||||||||||||    
T  988 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaaccccct 889  T
Q  262 tacctta 268  Q
    |||||||    
T  888 tacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 23507096 - 23507302
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  23507096 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23507195  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  23507196 aaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaaccccct 23507295  T
Q  262 tacctta 268  Q
    |||||||    
T  23507296 tacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 27182742 - 27182471
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |    
T  27182742 aacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttga 27182643  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | | ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||     
T  27182642 acatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatg 27182543  T
Q  198 -caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
      |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27182542 caaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  32 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  131 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 18531262 - 18530988
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| ||| |||  ||||||||||| |||||| ||||| |||||| ||     
T  18531262 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattg 18531164  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataa 196  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || |    
T  18531163 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaatta 18531064  T
Q  197 tcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacccccttacctta 268  Q
    | ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| |||||||||||||||||||||    
T  18531063 tgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 22054028 - 22053753
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |    
T  22054028 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 22053929  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 196  Q
    ||||| ||| | |||||||||||||||  ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||     
T  22053928 acatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattat 22053829  T
Q  197 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  22053828 gaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 192  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 34939408 - 34939540
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||| | ||||||    
T  34939508 agttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  162 agttggagcacgaatttagca 182  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  64 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 163  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  164 ttggagcacgaattt 178  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 4200169 - 4199985
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 97  Q
    ||||||||||| ||| |||||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| |     
T  4200169 aacatcaattgaacatgaatcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatg 4200070  T
Q  98 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 182  Q
    |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
T  4200069 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  162 agttggagcacgaattta 179  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 22366601 - 22366481
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  22366601 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 22366502  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  22366501 agcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 311  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 18778112 - 18777995
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  18778112 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 18778013  T
Q  162 agttggagcacgaattta 179  Q
    ||   |||||||||||||    
T  18778012 agcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
Q  115 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950879 acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 6196 - 5990
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  ||||||||||||||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaaccccct 5997  T
Q  262 tacctta 268  Q
    |||||||    
T  5996 tacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 19274 - 19543
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |    
T  19274 aacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 19373  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 197  Q
    ||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  19374 acatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatg 19473  T
Q  198 -caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacc 265  Q
      |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19474 caaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 21358 - 21553
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |    
T  21358 aacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttga 21457  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    ||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21458 acatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 269
Target Start/End: Complemental strand, 37104 - 36836
Alignment:
Q  5 tcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacat 102  Q
    ||||||| |||||| ||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||    
T  37104 tcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacat 37005  T
Q  103 ggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caa 200  Q
    | ||| | |||||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   ||    
T  37004 gtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaa 36905  T
Q  201 aattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 269  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36904 aattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 23153578 - 23153786
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  23153578 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23153677  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23153678 agttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccc 23153777  T
Q  260 cttacctta 268  Q
    |||||||||    
T  23153778 cttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 14626249 - 14626045
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 162  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  163 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 262  Q
    |   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  ||||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaaccccctt 14626050  T
Q  263 acctt 267  Q
    |||||    
T  14626049 acctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 1657880 - 1657748
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| |||||||||||||| |||||||| |||||     
T  1657880 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcac 1657781  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||||| ||||||    
T  1657780 agttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 15862602 - 15862734
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| |||||||||||||| |||||| ||||||    
T  15862702 agttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 35009571 - 35009439
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  35009571 gcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcac 35009472  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||||| ||||||    
T  35009471 agttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  199 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 269
Target Start/End: Complemental strand, 1650225 - 1650020
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  162 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  1650125 agtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaaccccc 1650029  T
Q  261 ttaccttaa 269  Q
    |||||||||    
T  1650028 ttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  111 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 25175695 - 25175815
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| || ||     
T  25175695 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacac 25175794  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  25175795 agcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 27654103 - 27653983
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||| |||| |||||     
T  27654103 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcac 27654004  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  27654003 agcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc 159  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||    
T  16825874 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc 16825775  T
Q  160 aaagttggagcacgaatttagca 182  Q
    | ||   ||||||||||||||||    
T  16825774 acagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  97 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  236 atgattatgataaagactaacccccttacctt 267  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 268
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  238 gattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 126; Significance: 6e-65; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 64 - 268
Target Start/End: Complemental strand, 26545 - 26340
Alignment:
Q  64 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 163  Q
    |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||| ||||||||| ||||||||||||||||||||||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  164 ttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 262  Q
    |||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26445 ttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaaccccctt 26346  T
Q  263 acctta 268  Q
    ||||||    
T  26345 acctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 8312 - 8180
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||||| ||||||    
T  8212 agttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 247574 - 247366
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||||||||||||||||||| |     
T  247574 gcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattac 247475  T
Q  162 agttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247474 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 247375  T
Q  260 cttacctta 268  Q
    |||||||||    
T  247374 cttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 12244 - 12450
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  12244 gcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 12343  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 260  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | ||||||||||||||||||||||||||    
T  12344 agttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaaccccc 12442  T
Q  261 ttacctta 268  Q
    ||||||||    
T  12443 ttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 4e-63; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  29 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 127  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  128 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 128301 - 128095
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  128301 gcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 128202  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  128201 agttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaaccccct 128102  T
Q  262 tacctta 268  Q
    |||||||    
T  128101 tacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  70 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 272093 - 272362
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    |||| |||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |    
T  272093 aacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttga 272192  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc 198  Q
    ||||| ||| |  ||| |||||||||| |||| |||||||||| |||||||||||||||| | |||||||| ||| ||||||||| | | ||||||||||    
T  272193 acatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatc 272292  T
Q  199 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272293 aaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 259  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  260 cttacctta 268  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  143 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 240  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  241 tatgataaagactaacccccttacctta 268  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  236 atgattatgataaagactaacccccttacctt 267  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 62 - 258
Target Start/End: Complemental strand, 5193 - 4996
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||| ||||||||| ||||||||||||||| |||     
T  5193 gcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcac 5094  T
Q  162 agttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 258  Q
    |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5093 agttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 9009 - 9215
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| |||| ||| ||||||||||||||||||| |||||     
T  9009 gcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcac 9108  T
Q  162 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 261  Q
    |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  9109 aaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaaccccct 9208  T
Q  262 tacctta 268  Q
    |||||||    
T  9209 tacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 123296 - 123087
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  123296 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 123197  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaaccc 258  Q
    | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||||    
T  123196 aattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaaccc 123097  T
Q  259 ccttacctta 268  Q
    ||||||||||    
T  123096 ccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 8917 - 9192
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||  ||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |    
T  8917 aacatcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattga 9016  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taa 196  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||     
T  9017 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattat 9116  T
Q  197 tcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 268  Q
      ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| ||||||||| | |||||||||    
T  9117 gaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  168 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 267  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  268 a 268  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 148852 - 149012
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  148852 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 148951  T
Q  162 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 220  Q
    ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148952 agttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  162 agttggagcacgaatttagcaacaat 187  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 81; Significance: 4e-38; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 13637 - 13769
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  13637 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaa 13736  T
Q  162 agttggagcacgaatttagcaacaatcatccat 194  Q
    |||| ||||||||||||||||||||| ||||||    
T  13737 agttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 48318 - 48443
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  48318 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 48417  T
Q  162 agttggagcacgaatttagcaacaat 187  Q
    ||||||||||||||||||||||||||    
T  48418 agttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 664 - 534
Alignment:
Q  64 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 163  Q
    |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||    
T  664 acaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacag 565  T
Q  164 ttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||||||||||| ||||||    
T  564 ttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 41780 - 41911
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 162  Q
    ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |    
T  41780 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 41879  T
Q  163 gttggagcacgaatttagcaacaatcatccat 194  Q
    ||| ||||||||||||| ||||||| ||||||    
T  41880 gttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  228 aaatgatgatgattatgataaagactaacccccttacctta 268  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 107815 - 108003
Alignment:
Q  1 aacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaa 98  Q
    ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |    
T  107815 aacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttga 107914  T
Q  99 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 187  Q
    ||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  107915 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 156  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  157 atcaaagttggagcacgaattt 178  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 179  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 34590 - 34460
Alignment:
Q  64 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 163  Q
    |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||    
T  34590 acaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacag 34491  T
Q  164 ttggagcacgaatttagcaacaatcatccat 194  Q
    || ||||||||||||||||| ||| ||||||    
T  34490 ttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  235 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  235 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 310  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 310  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 310  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 3094 - 3215
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||| ||||||||||| |||||     
T  3094 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcac 3193  T
Q  162 agttggagcacgaatttagcaa 183  Q
    ||   |||||||||||||||||    
T  3194 agcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  162 agttggagcacgaatttagca 182  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 178
Target Start/End: Original strand, 167 - 283
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  162 agttggagcacgaattt 178  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  235 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 43129 - 43226
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 159  Q
    ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  43129 gcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  63 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 144  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 177  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 161  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  162 agttggagcacgaatttagca 182  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 316  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  62 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 160  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  65 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 164  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  165 tggagcacgaatttagcaa 183  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 94 - 164
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 307  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 311  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  237 tgattatgataaagactaacccccttaccttaattatc 274  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  111 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 194  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  63 cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 144  Q
    |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 442 - 499
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  69 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 166  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  167 gagcacgaatttagcaacaat 187  Q
    ||||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  236 atgattatgataaagactaacccccttaccttaa 269  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  225 acaaaatgatgatgattatgataaagactaacccccttacctta 268  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  140 atgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  140 atgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 632 - 689
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 178  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  252 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 309  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0389 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  137 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 177  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  236 atgattatgataaagactaacccccttacctta 268  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

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