View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9450_low_32 (Length: 252)
Name: NF9450_low_32
Description: NF9450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9450_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 3781189 - 3781423
Alignment:
| Q |
1 |
tcctccagagttgtttatttcgagatttttctagtttcgtttcaaaatttgggcttgatggctgctatttgggatcacttgtattgaattatctttctat |
100 |
Q |
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| T |
3781189 |
tcctccagagttgtttatttcgagatttttctagtttcgtttcaaaatttgggcttgatggctgctatttgggatcacttgtattgaattatctttctat |
3781288 |
T |
|
| Q |
101 |
attatttgttatggttgacctagacttttgtggggattttctgggtcagcctcccaatttttatactttgttttcattaatcaacattttcttttgccta |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3781289 |
attatttgttatggttgacctagacttttgtgaggattttctgggtcagcctcccaatttttatactttgttttcattaatcaacattttcttttgccta |
3781388 |
T |
|
| Q |
201 |
gaaaaagttcatagattttttgggttccttgttag |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
3781389 |
gaaaaagttcatagattttttgggttccttgttag |
3781423 |
T |
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