View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9450_low_33 (Length: 252)
Name: NF9450_low_33
Description: NF9450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9450_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4619915 - 4620152
Alignment:
| Q |
1 |
aatggcaggaaacatctctggtccaagtgtgagcaatgctgctaatattttgctgaatcatgacttctcaaatgacctgaactcttggcatctcaattgc |
100 |
Q |
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| T |
4619915 |
aatggcaggaaacatctctggtccaagtgtgagcaatgctgctaatattttgctgaatcatgacttctcaaatgacctgaactcttggcatctcaattgc |
4620014 |
T |
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| Q |
101 |
tgcaatggctatgtaatttcgtccaaagcaggtggtcaaggtgtaaatttgatggattcggattgtaattatgccgttatcaccgaccgaaacgaaggct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
4620015 |
tgcaatggctatgtaatttcgtccaaagcaggtggtcaaggtgtaaatttgatggattcggattgtaattatgctgttatcaccgaccgaaacgaaggct |
4620114 |
T |
|
| Q |
201 |
ggcaaggtcttgagcaagatatcacagacagaatttcc |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
4620115 |
ggcaaggtcttgagcaagatatcacagacagaatttcc |
4620152 |
T |
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