View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9450_low_52 (Length: 229)
Name: NF9450_low_52
Description: NF9450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9450_low_52 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 39230828 - 39231025
Alignment:
| Q |
14 |
cacagacactgcaataatttcttctgttattaccactcctgtttctgcaccattaccagcaacagttatcaacactctccttcactatgcttcaaaatcc |
113 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39230828 |
cacaaacactgcaataatttcttctgttattaccactcctgtttctgcaccattaccagcaacagttatcaacactctccttcactatgcttcaaaatcc |
39230927 |
T |
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| Q |
114 |
aacgactcataccatatgacatactctgatctcaaaccaatctccgacgtgcttcgaaagtgttcatcgccatgtaacttgcttgtttttggcctcac |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39230928 |
aacgactcataccatatgacatactctgatctcaaaccaatctccgacgtgcttcgaaagtgttcatcgccatgtaacttgcttgtttttggcctcac |
39231025 |
T |
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