View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9451_low_10 (Length: 400)
Name: NF9451_low_10
Description: NF9451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9451_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 3 - 384
Target Start/End: Original strand, 37320171 - 37320548
Alignment:
| Q |
3 |
aaaaacatgacaagtacagactagtaaatcataacaacacaacaatcttaattaattacctcgtcgagagaatgataatcatcagcaatccttgaatatc |
102 |
Q |
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| T |
37320171 |
aaaaacatgacaagtacagactagtaaatcataacaacacaacaatcttaa----ttacctcgtcgagagaatgataatcatcagcaatccttgaatatc |
37320266 |
T |
|
| Q |
103 |
tcctatccaacttcctattcggccgtgaataatcatgagagggagcctgtgtagggggacggtgattaggcctttgatatggattttgctgtggagggta |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37320267 |
tcctatccaacttcctattcggccgtgaataatcatgagagggagcctgtgtagggggacggtgattaggcctttgatatggattttgctgtggagggta |
37320366 |
T |
|
| Q |
203 |
tggatatgttgattgtggatatccatagttattttcccatgaagatgaagaagaaccaacagagccatatgatgttgatggtgatgatgaatttacatct |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37320367 |
tggatatgttgattgtggatatccatagttattttcccatgaagatgaagaagaaccaacagagccatatgatgttgatggtgatgatgaatttacatct |
37320466 |
T |
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| Q |
303 |
ctcctccgagacccttttgaactcttacctcccattaccgtctccttaaaaatcaatgcaaggaaacacagaaccacaacca |
384 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37320467 |
ctcctccgagacccttttgaactcttacctcccattaccgtctccttgaaaatcaatgcaaggaaacacagaaccacaacca |
37320548 |
T |
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