View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9451_low_8 (Length: 403)
Name: NF9451_low_8
Description: NF9451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9451_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 72 - 387
Target Start/End: Complemental strand, 14625033 - 14624718
Alignment:
| Q |
72 |
cacgttaaccttctggttttttcttagttaaagagacttcaagggttattaattcattcgtttgaaagatcgataatttttcatccacaaatcaaattta |
171 |
Q |
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| T |
14625033 |
cacgttaaccttctggttttttctgagttaaagagacttcaagggttattaattcattcgtttgaaagattgataatttttcatccacaaatcaaattta |
14624934 |
T |
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| Q |
172 |
aaatttttcaaacgatttatgattagtgaactcctttaccacttaagtcaaattaacttcgttgttttcttaattgaaattctatctagacttattcatt |
271 |
Q |
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| T |
14624933 |
aattttttcaaacgatttatgattagtgaactcctttaccacttaagtcaaattaacttcgttgttttcttaattgaaattctatctagacttatccatt |
14624834 |
T |
|
| Q |
272 |
ttgaaattaaacaccaatacttctaatggatgttacactttccctaagcgtgtaatattgtgttgatttgaattattttggttccacccacaagagaaaa |
371 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
14624833 |
ttgaaattaaacaccaatacttctaatggatgttacactttccctaagcgtgtaatattgtgttgatttgaattattttggttccacccacaagggaaaa |
14624734 |
T |
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| Q |
372 |
tggcctaattcaatag |
387 |
Q |
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|||||||||||||||| |
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| T |
14624733 |
tggcctaattcaatag |
14624718 |
T |
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