View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9453_low_2 (Length: 590)

Name: NF9453_low_2
Description: NF9453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9453_low_2
NF9453_low_2
[»] chr3 (78 HSPs)
chr3 (242-435)||(32901867-32902075)
chr3 (297-435)||(42644211-42644349)
chr3 (124-231)||(50823727-50823834)
chr3 (124-231)||(50852026-50852133)
chr3 (124-228)||(8400884-8400988)
chr3 (124-228)||(7417827-7417931)
chr3 (125-228)||(35198795-35198898)
chr3 (128-228)||(22855920-22856020)
chr3 (124-228)||(52545350-52545454)
chr3 (129-224)||(55468033-55468129)
chr3 (124-227)||(22371729-22371832)
chr3 (132-231)||(43334050-43334149)
chr3 (124-224)||(34824585-34824685)
chr3 (142-228)||(37330606-37330692)
chr3 (124-229)||(19872481-19872586)
chr3 (142-227)||(30534902-30534987)
chr3 (124-227)||(29635897-29636001)
chr3 (309-431)||(52736716-52736839)
chr3 (142-228)||(37454743-37454829)
chr3 (296-431)||(30301202-30301336)
chr3 (155-231)||(25910662-25910738)
chr3 (1-83)||(32902062-32902149)
chr3 (296-431)||(44225517-44225653)
chr3 (136-223)||(42876256-42876343)
chr3 (124-190)||(48077978-48078044)
chr3 (127-228)||(25589253-25589347)
chr3 (134-229)||(30203652-30203744)
chr3 (309-431)||(53567883-53568007)
chr3 (358-431)||(50671880-50671953)
chr3 (296-427)||(25181166-25181298)
chr3 (332-407)||(32932162-32932238)
chr3 (297-431)||(10852727-10852862)
chr3 (296-396)||(7012627-7012728)
chr3 (259-304)||(42644357-42644402)
chr3 (332-431)||(4486764-4486864)
chr3 (308-431)||(23918794-23918918)
chr3 (128-231)||(50725993-50726096)
chr3 (128-231)||(50786752-50786855)
chr3 (260-431)||(29252102-29252270)
chr3 (280-344)||(23496357-23496421)
chr3 (280-344)||(50664798-50664862)
chr3 (192-231)||(773674-773713)
chr3 (282-329)||(5407011-5407058)
chr3 (297-431)||(21023229-21023364)
chr3 (297-344)||(25129481-25129528)
chr3 (282-349)||(35058445-35058512)
chr3 (297-340)||(48089632-48089675)
chr3 (280-327)||(55154558-55154605)
chr3 (280-349)||(10853264-10853333)
chr3 (279-344)||(31084247-31084312)
chr3 (260-329)||(51285681-51285750)
chr3 (280-328)||(835963-836011)
chr3 (280-344)||(3348283-3348347)
chr3 (284-324)||(30300923-30300963)
chr3 (180-227)||(358942-358989)
chr3 (281-344)||(7899120-7899183)
chr3 (280-343)||(19877458-19877521)
chr3 (152-231)||(39438825-39438903)
chr3 (280-343)||(42484425-42484488)
chr3 (282-324)||(36302301-36302343)
chr3 (282-348)||(41459251-41459317)
chr3 (295-340)||(3776622-3776667)
chr3 (281-322)||(14022091-14022132)
chr3 (280-344)||(16246093-16246155)
chr3 (177-222)||(31297529-31297574)
chr3 (132-173)||(38724459-38724500)
chr3 (280-325)||(44939413-44939458)
chr3 (283-336)||(46018693-46018746)
chr3 (280-329)||(48189439-48189488)
chr3 (280-324)||(8424727-8424771)
chr3 (280-344)||(10334178-10334242)
chr3 (280-344)||(21225030-21225094)
chr3 (280-344)||(26519704-26519768)
chr3 (288-348)||(33548342-33548402)
chr3 (280-344)||(38172304-38172368)
chr3 (159-223)||(39623823-39623887)
chr3 (280-344)||(52966806-52966870)
chr3 (260-304)||(53568026-53568070)
[»] chr6 (26 HSPs)
chr6 (125-231)||(35163746-35163852)
chr6 (124-231)||(20685354-20685461)
chr6 (128-229)||(17948713-17948814)
chr6 (114-231)||(2711736-2711847)
chr6 (124-227)||(19686827-19686930)
chr6 (124-224)||(15070154-15070254)
chr6 (124-231)||(14505521-14505626)
chr6 (127-198)||(24336647-24336718)
chr6 (296-431)||(3605764-3605900)
chr6 (279-344)||(16442346-16442411)
chr6 (284-344)||(882782-882842)
chr6 (355-427)||(28020523-28020594)
chr6 (282-350)||(34911033-34911100)
chr6 (282-329)||(2234144-2234191)
chr6 (280-327)||(6208060-6208107)
chr6 (280-343)||(17829995-17830058)
chr6 (260-324)||(34026390-34026454)
chr6 (293-344)||(3816374-3816425)
chr6 (285-344)||(28466914-28466973)
chr6 (285-344)||(34620982-34621041)
chr6 (285-344)||(34736760-34736819)
chr6 (285-344)||(34748419-34748478)
chr6 (282-348)||(16122000-16122066)
chr6 (297-343)||(25208723-25208769)
chr6 (296-344)||(16548179-16548227)
chr6 (280-344)||(21254876-21254939)
[»] chr7 (54 HSPs)
chr7 (114-231)||(35109710-35109827)
chr7 (125-231)||(21577094-21577200)
chr7 (124-227)||(38265237-38265340)
chr7 (128-228)||(37095209-37095309)
chr7 (124-228)||(34721863-34721967)
chr7 (124-231)||(38405150-38405257)
chr7 (114-223)||(12472140-12472249)
chr7 (128-231)||(41151205-41151309)
chr7 (124-231)||(245260-245367)
chr7 (124-224)||(16059356-16059456)
chr7 (124-224)||(18116947-18117047)
chr7 (124-231)||(45278481-45278588)
chr7 (124-222)||(11216798-11216896)
chr7 (260-431)||(38494189-38494361)
chr7 (124-224)||(48176428-48176529)
chr7 (127-228)||(28407540-28407637)
chr7 (311-431)||(16353401-16353521)
chr7 (297-431)||(20088842-20088977)
chr7 (309-412)||(4228539-4228643)
chr7 (284-344)||(40561687-40561747)
chr7 (125-228)||(23028713-23028816)
chr7 (260-344)||(45557461-45557545)
chr7 (309-431)||(37148623-37148746)
chr7 (282-344)||(29829296-29829358)
chr7 (282-348)||(44967385-44967451)
chr7 (280-344)||(10371942-10372006)
chr7 (320-431)||(33936844-33936956)
chr7 (282-342)||(41841180-41841240)
chr7 (280-344)||(48459771-48459835)
chr7 (260-367)||(1766463-1766570)
chr7 (280-367)||(38230106-38230193)
chr7 (282-344)||(33853411-33853473)
chr7 (280-344)||(3342851-3342915)
chr7 (280-344)||(3622444-3622508)
chr7 (300-348)||(26975301-26975349)
chr7 (280-344)||(37639491-37639555)
chr7 (280-344)||(42752175-42752239)
chr7 (297-345)||(44570682-44570730)
chr7 (185-228)||(39234853-39234896)
chr7 (280-367)||(39634149-39634236)
chr7 (282-344)||(3750747-3750809)
chr7 (310-348)||(38510377-38510415)
chr7 (260-306)||(40491726-40491772)
chr7 (282-344)||(45823267-45823329)
chr7 (282-343)||(42740454-42740515)
chr7 (280-345)||(46541660-46541725)
chr7 (280-344)||(12964659-12964723)
chr7 (308-344)||(15311228-15311264)
chr7 (296-344)||(16079463-16079511)
chr7 (283-323)||(36270832-36270872)
chr7 (280-344)||(37562631-37562695)
chr7 (260-340)||(40422893-40422973)
chr7 (280-344)||(41715718-41715782)
chr7 (280-344)||(47021980-47022044)
[»] chr8 (46 HSPs)
chr8 (128-231)||(11404034-11404137)
chr8 (125-231)||(22711539-22711645)
chr8 (124-231)||(19723340-19723447)
chr8 (124-224)||(17095579-17095679)
chr8 (124-228)||(32296638-32296742)
chr8 (128-231)||(36261679-36261782)
chr8 (114-231)||(28739557-28739674)
chr8 (124-231)||(29767217-29767322)
chr8 (124-227)||(4840169-4840272)
chr8 (128-231)||(41553318-41553421)
chr8 (141-231)||(11909419-11909509)
chr8 (114-228)||(30682858-30682971)
chr8 (119-229)||(21354986-21355092)
chr8 (124-231)||(11610309-11610416)
chr8 (128-229)||(43288105-43288206)
chr8 (297-420)||(29970773-29970897)
chr8 (124-190)||(24475033-24475099)
chr8 (297-412)||(19649165-19649281)
chr8 (167-231)||(27879556-27879620)
chr8 (167-231)||(28019737-28019801)
chr8 (282-428)||(39219684-39219831)
chr8 (311-415)||(35550198-35550302)
chr8 (309-431)||(12124757-12124880)
chr8 (124-171)||(27881044-27881091)
chr8 (124-171)||(28021225-28021272)
chr8 (337-430)||(35239434-35239527)
chr8 (260-344)||(2778609-2778693)
chr8 (260-329)||(2071545-2071614)
chr8 (280-329)||(2778338-2778387)
chr8 (280-349)||(3467576-3467645)
chr8 (279-344)||(40742172-40742237)
chr8 (280-344)||(22936790-22936854)
chr8 (280-344)||(31246312-31246376)
chr8 (296-352)||(36779431-36779487)
chr8 (280-344)||(41289055-41289119)
chr8 (280-347)||(24183841-24183908)
chr8 (280-327)||(36121542-36121589)
chr8 (297-343)||(10552923-10552969)
chr8 (280-350)||(36108636-36108706)
chr8 (260-301)||(10368118-10368159)
chr8 (335-431)||(15115682-15115779)
chr8 (280-344)||(32767485-32767547)
chr8 (296-412)||(38715222-38715339)
chr8 (124-228)||(44741919-44742021)
chr8 (260-304)||(32994131-32994175)
chr8 (296-344)||(38516346-38516394)
[»] chr5 (36 HSPs)
chr5 (124-231)||(17064352-17064459)
chr5 (124-229)||(20983001-20983106)
chr5 (143-228)||(37976598-37976683)
chr5 (260-431)||(32560248-32560419)
chr5 (136-228)||(41910865-41910957)
chr5 (309-431)||(43152386-43152509)
chr5 (297-431)||(3748864-3748999)
chr5 (128-222)||(31673863-31673956)
chr5 (296-423)||(22811000-22811128)
chr5 (310-431)||(19204028-19204150)
chr5 (296-431)||(2868363-2868499)
chr5 (282-412)||(24036559-24036689)
chr5 (128-228)||(5009416-5009515)
chr5 (280-344)||(22482243-22482307)
chr5 (132-223)||(39162859-39162947)
chr5 (280-344)||(18637379-18637443)
chr5 (298-345)||(7667751-7667798)
chr5 (297-348)||(14299418-14299469)
chr5 (281-344)||(19784867-19784930)
chr5 (380-431)||(33740851-33740902)
chr5 (171-226)||(38255559-38255614)
chr5 (297-407)||(43045185-43045296)
chr5 (282-344)||(2483710-2483772)
chr5 (282-348)||(15368565-15368630)
chr5 (128-194)||(18303343-18303409)
chr5 (311-424)||(37036733-37036844)
chr5 (280-323)||(2694754-2694797)
chr5 (184-227)||(35237059-35237102)
chr5 (161-228)||(38031257-38031324)
chr5 (137-170)||(21968782-21968815)
chr5 (311-348)||(28973949-28973986)
chr5 (280-329)||(33953896-33953945)
chr5 (280-344)||(3667908-3667972)
chr5 (296-344)||(5969957-5970005)
chr5 (280-344)||(35760243-35760307)
chr5 (282-326)||(42439566-42439610)
[»] chr2 (62 HSPs)
chr2 (124-231)||(17136416-17136523)
chr2 (125-231)||(2754047-2754153)
chr2 (124-231)||(45136966-45137073)
chr2 (124-231)||(21637926-21638033)
chr2 (123-228)||(36836328-36836433)
chr2 (124-231)||(36380128-36380235)
chr2 (124-231)||(40156069-40156176)
chr2 (124-231)||(25987657-25987765)
chr2 (124-228)||(44650422-44650526)
chr2 (124-231)||(10745228-10745335)
chr2 (124-231)||(558435-558542)
chr2 (124-218)||(6672802-6672896)
chr2 (124-231)||(26690183-26690290)
chr2 (127-231)||(2357072-2357175)
chr2 (128-228)||(33066623-33066723)
chr2 (124-231)||(3200910-3201017)
chr2 (124-231)||(5039449-5039556)
chr2 (128-228)||(21487181-21487282)
chr2 (124-225)||(30372682-30372783)
chr2 (124-231)||(7860142-7860249)
chr2 (128-227)||(13047156-13047252)
chr2 (282-431)||(23359927-23360077)
chr2 (129-224)||(4553561-4553657)
chr2 (297-420)||(12110847-12110970)
chr2 (178-228)||(2098825-2098875)
chr2 (353-431)||(37543866-37543944)
chr2 (297-420)||(1763192-1763316)
chr2 (308-431)||(23377465-23377589)
chr2 (300-428)||(11005706-11005836)
chr2 (281-344)||(10918652-10918715)
chr2 (309-431)||(14531978-14532092)
chr2 (280-367)||(31224706-31224793)
chr2 (296-431)||(5055130-5055266)
chr2 (280-344)||(1945034-1945098)
chr2 (285-329)||(29968937-29968981)
chr2 (309-431)||(42770420-42770541)
chr2 (281-344)||(3853949-3854012)
chr2 (297-348)||(4119369-4119420)
chr2 (288-343)||(4894090-4894145)
chr2 (280-327)||(14821228-14821275)
chr2 (318-423)||(29844146-29844252)
chr2 (296-431)||(26806266-26806400)
chr2 (280-344)||(9988496-9988560)
chr2 (280-344)||(25747877-25747940)
chr2 (280-344)||(30007548-30007612)
chr2 (133-173)||(30477240-30477280)
chr2 (260-344)||(30503303-30503387)
chr2 (280-327)||(5916237-5916284)
chr2 (280-327)||(36312342-36312389)
chr2 (289-348)||(38600447-38600506)
chr2 (282-344)||(7632521-7632583)
chr2 (297-327)||(37402198-37402228)
chr2 (282-343)||(3476356-3476417)
chr2 (280-329)||(8170376-8170425)
chr2 (311-344)||(15220817-15220850)
chr2 (124-165)||(20961510-20961551)
chr2 (282-323)||(32827620-32827661)
chr2 (280-344)||(2213555-2213619)
chr2 (280-344)||(7295343-7295407)
chr2 (280-344)||(34433301-34433365)
chr2 (260-304)||(37745789-37745833)
chr2 (300-344)||(41031465-41031508)
[»] chr4 (81 HSPs)
chr4 (114-231)||(46494394-46494511)
chr4 (124-231)||(29576444-29576551)
chr4 (114-231)||(51713961-51714078)
chr4 (124-228)||(7173584-7173688)
chr4 (124-224)||(51066522-51066622)
chr4 (124-231)||(55231716-55231823)
chr4 (114-227)||(36192560-36192673)
chr4 (124-228)||(30970383-30970487)
chr4 (128-229)||(32139197-32139298)
chr4 (123-231)||(2570229-2570337)
chr4 (128-231)||(41523430-41523533)
chr4 (133-231)||(676766-676864)
chr4 (143-228)||(22304090-22304175)
chr4 (124-228)||(39863777-39863881)
chr4 (124-231)||(50905777-50905884)
chr4 (124-197)||(8740477-8740550)
chr4 (114-231)||(47626989-47627106)
chr4 (128-231)||(4080548-4080651)
chr4 (133-225)||(51279035-51279127)
chr4 (285-431)||(20676987-20677133)
chr4 (260-412)||(22699698-22699851)
chr4 (309-431)||(14597650-14597773)
chr4 (282-412)||(22980701-22980832)
chr4 (282-412)||(22994288-22994419)
chr4 (282-423)||(46957968-46958110)
chr4 (297-431)||(20231919-20232055)
chr4 (260-352)||(36150621-36150713)
chr4 (368-431)||(38306201-38306264)
chr4 (318-431)||(1589629-1589743)
chr4 (124-224)||(2294719-2294813)
chr4 (296-431)||(28947762-28947898)
chr4 (127-190)||(22423408-22423471)
chr4 (282-349)||(33843802-33843869)
chr4 (360-431)||(40286226-40286297)
chr4 (162-231)||(23084461-23084530)
chr4 (130-223)||(50399646-50399739)
chr4 (280-343)||(42944895-42944958)
chr4 (280-349)||(33574198-33574267)
chr4 (280-344)||(16566330-16566394)
chr4 (159-223)||(37990599-37990663)
chr4 (280-348)||(54488626-54488694)
chr4 (280-327)||(32238056-32238103)
chr4 (130-229)||(40012548-40012646)
chr4 (181-224)||(51066240-51066283)
chr4 (297-344)||(53532002-53532049)
chr4 (280-343)||(55638752-55638815)
chr4 (282-344)||(48045679-48045741)
chr4 (282-348)||(54153066-54153131)
chr4 (287-344)||(27045554-27045611)
chr4 (174-219)||(28202598-28202643)
chr4 (282-327)||(37500205-37500250)
chr4 (280-344)||(46830066-46830130)
chr4 (280-344)||(48550424-48550488)
chr4 (280-344)||(51922965-51923029)
chr4 (285-328)||(2206260-2206303)
chr4 (280-343)||(26651845-26651908)
chr4 (282-344)||(4954050-4954112)
chr4 (282-344)||(13167550-13167612)
chr4 (295-329)||(26617281-26617315)
chr4 (309-347)||(32634099-32634137)
chr4 (282-344)||(39438886-39438948)
chr4 (282-348)||(41751199-41751265)
chr4 (282-344)||(41866179-41866241)
chr4 (282-344)||(50357973-50358035)
chr4 (282-344)||(52062977-52063039)
chr4 (312-349)||(17898085-17898122)
chr4 (140-221)||(28202701-28202782)
chr4 (297-346)||(46507979-46508028)
chr4 (280-344)||(19599493-19599556)
chr4 (360-412)||(28658051-28658103)
chr4 (279-323)||(28752560-28752604)
chr4 (280-344)||(29149304-29149368)
chr4 (280-344)||(38306036-38306100)
chr4 (280-344)||(39187759-39187823)
chr4 (280-344)||(39636810-39636874)
chr4 (282-342)||(39672982-39673042)
chr4 (280-344)||(43772120-43772184)
chr4 (297-349)||(45471083-45471135)
chr4 (280-344)||(48550242-48550306)
chr4 (280-344)||(49519755-49519819)
chr4 (260-344)||(54487197-54487281)
[»] chr1 (60 HSPs)
chr1 (110-230)||(45324021-45324141)
chr1 (123-231)||(14498075-14498183)
chr1 (124-224)||(30054445-30054545)
chr1 (114-226)||(30370061-30370173)
chr1 (128-231)||(4573412-4573515)
chr1 (124-227)||(22024132-22024235)
chr1 (124-231)||(12025210-12025317)
chr1 (127-231)||(20014490-20014594)
chr1 (124-224)||(21090144-21090244)
chr1 (128-226)||(30850841-30850939)
chr1 (124-231)||(33762536-33762643)
chr1 (139-218)||(35371754-35371833)
chr1 (124-227)||(33763254-33763357)
chr1 (296-431)||(4346950-4347086)
chr1 (154-231)||(35618034-35618111)
chr1 (310-431)||(7765311-7765433)
chr1 (125-224)||(44438553-44438652)
chr1 (306-431)||(7335903-7336029)
chr1 (296-431)||(5930736-5930872)
chr1 (167-227)||(17015192-17015252)
chr1 (311-424)||(36447705-36447818)
chr1 (280-344)||(20800275-20800339)
chr1 (280-344)||(35569200-35569264)
chr1 (280-387)||(40352411-40352518)
chr1 (280-340)||(47978359-47978419)
chr1 (282-326)||(28287260-28287304)
chr1 (279-343)||(47085898-47085962)
chr1 (308-418)||(47981821-47981931)
chr1 (297-367)||(32365120-32365190)
chr1 (282-368)||(49178215-49178301)
chr1 (282-367)||(25061267-25061352)
chr1 (280-344)||(1199891-1199955)
chr1 (260-304)||(3515957-3516001)
chr1 (297-349)||(5268310-5268362)
chr1 (296-344)||(13344837-13344885)
chr1 (280-344)||(31223438-31223502)
chr1 (280-344)||(42850217-42850281)
chr1 (280-327)||(25230087-25230134)
chr1 (297-344)||(29759715-29759762)
chr1 (281-344)||(48510972-48511035)
chr1 (282-344)||(4369803-4369864)
chr1 (282-348)||(5410699-5410765)
chr1 (282-348)||(49242982-49243048)
chr1 (284-329)||(6932113-6932158)
chr1 (280-329)||(10470668-10470717)
chr1 (282-367)||(11561863-11561948)
chr1 (280-329)||(12247498-12247547)
chr1 (299-344)||(28464939-28464984)
chr1 (358-431)||(29438562-29438635)
chr1 (260-329)||(34571088-34571157)
chr1 (287-348)||(50751233-50751294)
chr1 (282-342)||(3134656-3134716)
chr1 (260-304)||(5167381-5167425)
chr1 (286-342)||(6752789-6752845)
chr1 (260-304)||(7765247-7765291)
chr1 (280-344)||(7826352-7826416)
chr1 (296-348)||(13056057-13056109)
chr1 (260-304)||(15477340-15477384)
chr1 (280-344)||(27801650-27801714)
chr1 (280-348)||(45710109-45710176)
[»] scaffold0021 (1 HSPs)
scaffold0021 (124-228)||(107691-107794)
[»] scaffold0015 (1 HSPs)
scaffold0015 (297-431)||(65452-65587)
[»] scaffold0009 (1 HSPs)
scaffold0009 (296-431)||(199382-199518)
[»] scaffold0005 (1 HSPs)
scaffold0005 (309-431)||(219605-219728)
[»] scaffold0172 (1 HSPs)
scaffold0172 (297-420)||(15271-15394)
[»] scaffold0691 (1 HSPs)
scaffold0691 (124-202)||(6994-7072)
[»] scaffold0394 (1 HSPs)
scaffold0394 (282-327)||(5829-5874)
[»] scaffold0184 (1 HSPs)
scaffold0184 (334-431)||(6914-7010)


Alignment Details
Target: chr3 (Bit Score: 119; Significance: 2e-60; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 242 - 435
Target Start/End: Complemental strand, 32902075 - 32901867
Alignment:
Q  242 gaattaggtgactaagcctgtttggttatgcagtgatgagaattgattttgagtgaattgattctag---------------ttaaaagtgagttgaatg 326  Q
    ||||||||||||||||  ||||| ||||||| |||||||||||||||||||||| |||||||||||                |||||||||| || |||     
T  32902075 gaattaggtgactaagtttgtttcgttatgcggtgatgagaattgattttgagttaattgattctataaaaattgattttaattaaaagtgaattaaata 32901976  T
Q  327 taacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32901975 taacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtgaatga 32901876  T
Q  427 ccaaagtag 435  Q
    |||||||||    
T  32901875 ccaaagtag 32901867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 42644349 - 42644211
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttg 396  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42644349 aattgattttagttaaaagtgagttgaatgtaaagtgatttatgtttggatattttataataaaaatgatttgtaggaaaaatgttgtttggatattttg 42644250  T
Q  397 tgttaaaattgcttttgggtgtgtaaatgaccaaagtag 435  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  42644249 tgttaaaattgtttttgggtgtgtaaatgaccaaagtag 42644211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 50823727 - 50823834
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50823727 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 50823826  T
Q  224 atttttgt 231  Q
    ||||||||    
T  50823827 atttttgt 50823834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 50852133 - 50852026
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50852133 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 50852034  T
Q  224 atttttgt 231  Q
    ||||||||    
T  50852033 atttttgt 50852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 8400884 - 8400988
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8400884 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 8400983  T
Q  224 atttt 228  Q
    |||||    
T  8400984 atttt 8400988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 7417827 - 7417931
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7417827 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttcactgccttggactggggcaccatcccctcaccctaaa 7417926  T
Q  224 atttt 228  Q
    |||||    
T  7417927 atttt 7417931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 35198795 - 35198898
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35198795 tgcctttgcagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaaa 35198894  T
Q  225 tttt 228  Q
    ||||    
T  35198895 tttt 35198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 22855920 - 22856020
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  22855920 ctttggagggaggtaaatgtaattacctttgtaagtgctctttaagcccaaaggtcttccctgccttggactggagcaccatcccctcaccctaaaattt 22856019  T
Q  228 t 228  Q
    |    
T  22856020 t 22856020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 52545350 - 52545454
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||  |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52545350 gtgcctttaaagggaggtaaatgtaaatacttttgtaagtagtctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 52545449  T
Q  224 atttt 228  Q
    |||||    
T  52545450 atttt 52545454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 55468033 - 55468129
Alignment:
Q  129 tttggagggaggtaaatgtaaatacctttgtaagtgctctttgag-cccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  55468033 tttggagggaggtaaatgtaaatacctttgtaagtgctctttgagccccgaaggtcttctctgccttggactggggcaccatcccctcaccctaaaa 55468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 22371832 - 22371729
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||  || ||||||||||||||||||||||||||||    
T  22371832 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaagatcttccctgctttagactggggcaccatcccctcaccctaaa 22371733  T
Q  224 attt 227  Q
    ||||    
T  22371732 attt 22371729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 43334149 - 43334050
Alignment:
Q  132 ggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  43334149 ggagggaggtaaatgtaaatacttttgtaagtgctatttgagcccgaaggtcttccctgccttggactggggtaccatcccctcaccctaaaaattttgt 43334050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 34824585 - 34824685
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  34824585 gtgcctttgaagggaggtaaatgtaattatctttgtaagtgctctttgatcccgaaggtcttcccggccttggactggggcaccatcccctcaccctaaa 34824684  T
Q  224 a 224  Q
    |    
T  34824685 a 34824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 37330692 - 37330606
Alignment:
Q  142 aaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37330692 aaatgtaattacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttt 37330606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 19872586 - 19872481
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||| |||||||  ||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19872586 gtgcctttggaggaaggtaaaattaattacctttgtaagtactctttgaatccgaaggtcttccctgtcttggactggggcaccatcccctcatcctaaa 19872487  T
Q  224 attttt 229  Q
    ||||||    
T  19872486 attttt 19872481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 30534987 - 30534902
Alignment:
Q  142 aaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||    
T  30534987 aaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggtaccatcccctcaccctaaaattt 30534902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 29635897 - 29636001
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcacc-atcccctcaccctaa 222  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||| || ||||||| ||||    
T  29635897 gtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttaagcccgaatgtcttccctgccttggagtggggcaccaattccctcacgctaa 29635996  T
Q  223 aattt 227  Q
    |||||    
T  29635997 aattt 29636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 52736839 - 52736716
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    ||||||||||| | |||| || ||||||| |||||| ||| ||||| ||||||||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  52736839 ttaaaagtgaggttaatgaaaagtgatttgtgtttggatacttttacaataaaagtgatttgtatgaaatatgttgtttagatattttgtgtcaaaattg 52736740  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
    ||||||| ||||||||||| ||||    
T  52736739 cttttggttgtgtaaatgatcaaa 52736716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 37454829 - 37454743
Alignment:
Q  142 aaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  37454829 aaatataattacctttgtaagtgctctttgagcccgaaggtcttccctaccttagattggggcaccatcccctcaccctaaaatttt 37454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 30301202 - 30301336
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| |  ||||||||||||||||||||  |||| ||||||||| ||   || |||||| |||||||||||| |||| ||||||||||||||||     
T  30301202 gaattgattttgattaaaagtgagttgaatgtatagtgaattatgtttggatcccttcataatagaagtgatttgtatgaaagatgttgtttggatatt- 30301300  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
     |||| |||||||||||||||||||||||||||||||    
T  30301301 -gtgtcaaaattgcttttgggtgtgtaaatgaccaaa 30301336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 25910738 - 25910662
Alignment:
Q  155 tttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  25910738 tttgtaagtgctctttgagtccgaagatcttccctgccttggactgaggcaccatcccctcaccctaaaatttttgt 25910662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32902149 - 32902062
Alignment:
Q  1 aaagggttttattttggtgaaatttggaattaaattttaattatggatatttttgtcat-----ggtgtaaccagaattaggtgacta 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     ||||||||||||||||||||||||    
T  32902149 aaagggttttattttggtgaaattgggaattaaattttaattatggatatttttctcatttcaaggtgtaaccagaattaggtgacta 32902062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 296 - 431
Target Start/End: Complemental strand, 44225653 - 44225517
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | |||||||||||||| ||||||| |||||||||||||| |||   | | || ||||||| |||||| ||||||||||||||||||| |     
T  44225653 gaattgattttcgttaaaagtgagtttaatgtaaagtgatttatgtttggataccctcacaacaaaagtgctttgtatgaaaaatgttgtttggatactc 44225554  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
      ||| |||||||||||||| ||||||||||||||||    
T  44225553 gatgtcaaaattgcttttggatgtgtaaatgaccaaa 44225517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 42876256 - 42876343
Alignment:
Q  136 ggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||| |||||||||||||||||||||| |  ||| ||||||||| ||||||||| ||||||||||| |||||||||||    
T  42876256 ggaggtaaatgtaattacctttgtaagtgctctttgaacttgaatgtcttccctatcttggactagggcaccatcctctcaccctaaa 42876343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 48078044 - 48077978
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctg 190  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  48078044 gtgcctttggaggaaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttccctg 48077978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 25589253 - 25589347
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| ||||       ||||| ||||||| |||||||| ||||||||||||||||||    
T  25589253 cctttggaaggaggtaaatgtaaataccttagtaagtgctctttgagtccga-------ccctgccttggacgggggcaccctcccctcaccctaaaatt 25589345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 30203744 - 30203652
Alignment:
Q  134 agggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattttt 229  Q
    |||||||||||||||||  ||||||||| || ||||||||| ||||||| |||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  30203744 agggaggtaaatgtaaa--cctttgtaaatgttctttgagctcgaaggttttcc-tgtcttgaactggggcaccatcccctcactctaaaaatttt 30203652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 53568007 - 53567883
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaa-tgttgtttggatattttgtgttaaaatt 406  Q
    |||||||||||||||||| || || ||||||||||| |||  ||||| ||| |||| ||||||  |||||| | ||||||||||||||||||| ||||||    
T  53568007 ttaaaagtgagttgaatgaaaagtaatttatgtttggatacctttatgatagaagttatttgtgcgaaaaaatattgtttggatattttgtgtcaaaatt 53567908  T
Q  407 gcttttgggtgtgtaaatgaccaaa 431  Q
    |||||| | | ||||||||||||||    
T  53567907 gcttttcgttatgtaaatgaccaaa 53567883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 50671880 - 50671953
Alignment:
Q  358 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||||||  | ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  50671880 aaaagtgatttacatgaaaaatgttgtttggatattttgtattaaaattgattttggttgtgtaaatgatcaaa 50671953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 427
Target Start/End: Complemental strand, 25181298 - 25181166
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| |  ||||||||||||| |||||||  | ||||||||||| |||  || |  | |||||||||||||   ||| |||||||||||||||||    
T  25181298 gaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggataccttcaccacaaaagtgatttgtttaaaatatgttgtttggatattt 25181199  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgac 427  Q
    ||||| ||||||| |||||||||| ||||||||    
T  25181198 tgtgtcaaaattgattttgggtgtttaaatgac 25181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 32932162 - 32932238
Alignment:
Q  332 tgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||  ||||| | |||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  32932162 tgatttatgtttgaatacctttattacaaaagtgatttgtatgaaatatgttgtttggatattttgtgtcaaaattg 32932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 10852727 - 10852862
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||  ||  |  | || ||||||||||| || |||||||||| ||||||| ||||    
T  10852727 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggctacctccaaaacaaaagtgatttatatgaaaaatgttatttggatgtttt 10852826  T
Q  396 gtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    | || | ||||||||||   |||||||| |||||||    
T  10852827 gagtcagaattgcttttaaatgtgtaaaagaccaaa 10852862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 396
Target Start/End: Complemental strand, 7012728 - 7012627
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||| |||  || | || ||||||||||||||  |||||  |||||||||| |||    
T  7012728 gaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaagaaaagtgatttgtataaaaaaatttgtttggatgttt 7012629  T
Q  395 tg 396  Q
    ||    
T  7012628 tg 7012627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 42644402 - 42644357
Alignment:
Q  259 ctgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  42644402 ctgtttggttatgcggtgatgagaattgattttgagtgaattgatt 42644357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 431
Target Start/End: Complemental strand, 4486864 - 4486764
Alignment:
Q  332 tgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 430  Q
    ||||||||||||||||| ||||| || | | || ||||| | ||||||| |||| |||||||||||||| | |||||||||| ||||||||||||| |||    
T  4486864 tgatttatgtttgaatacttttaaaagataggtaatttgcatgaaaaatattgtgtggatattttgtgtaacaattgctttttggtgtgtaaatgatcaa 4486765  T
Q  431 a 431  Q
    |    
T  4486764 a 4486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 431
Target Start/End: Complemental strand, 23918918 - 23918794
Alignment:
Q  308 gttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaatt 406  Q
    |||||||||||||||||||||| ||||||||||||||  ||  |||| || |||||||||||  | ||||||||||||| |||| ||||| |  | ||||    
T  23918918 gttaaaagtgagttgaatgtaaagtgatttatgtttggttacctttaaaacaaaagtgatttagatgaaaaatgttgttaggatgttttgaggcagaatt 23918819  T
Q  407 gcttttgggtgtgtaaatgaccaaa 431  Q
    ||||||   |||||||| |||||||    
T  23918818 gcttttaaatgtgtaaaagaccaaa 23918794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 50726096 - 50725993
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||| |||||||| ||| ||| ||||||||| || ||||||  |||| |||||||||   ||||| |||||||||||||| |||||||| || ||    
T  50726096 ctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtcttccctactttggattggggcaccatcccttcaccctacaaatt 50725997  T
Q  228 ttgt 231  Q
    ||||    
T  50725996 ttgt 50725993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 50786752 - 50786855
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||| |||||||| ||| ||| ||||||||| || ||||||  |||| |||||||||   ||||| |||||||||||||| |||||||| || ||    
T  50786752 ctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtcttccctactttggattggggcaccatcccttcaccctacaaatt 50786851  T
Q  228 ttgt 231  Q
    ||||    
T  50786852 ttgt 50786855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 431
Target Start/End: Original strand, 29252102 - 29252270
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataa 359  Q
    ||||||||| ||||| | | | |||||||||||| |||||||||| |  | ||||||||||| | |||||  |||||||||||||  |  || | ||       
T  29252102 tgtttggttctgcagcggtaaaaattgattttgattgaattgattttgatcaaaagtgagttaattgtaaattgatttatgtttgcctgcttcaaaa--- 29252198  T
Q  360 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||||||| || |||| |||||||||| | |||||| || |||||||||||||| | ||||||| ||||||    
T  29252199 aagtgatttatatgaaagatgttgtttgaaaattttgcgtcaaaattgcttttggatatgtaaattaccaaa 29252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 23496421 - 23496357
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  23496421 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 23496357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 50664862 - 50664798
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  50664862 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 50664798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 773674 - 773713
Alignment:
Q  192 cttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  773674 cttggactggggcaccatcccctcaccctagaatttttgt 773713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 5407058 - 5407011
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  5407058 aattgattttgagtgaattgattctagctaaaattgagttgaaggtaa 5407011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 21023229 - 21023364
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | |||||| ||||||||||| | | |||||||||||||  ||| ||| | || | ||||||||| || ||||| |   |||||||||||||    
T  21023229 aattgattttggttaaatgtgagttgaatttgaagtgatttatgtttagatactttcaaaacagaagtgatttttatgaaaactagcgtttggatatttt 21023328  T
Q  396 gtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    || ||  |||||||||||||||||| || |||||||    
T  21023329 gtatttgaattgcttttgggtgtgtgaaagaccaaa 21023364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 25129481 - 25129528
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||    
T  25129481 aattgattcaggataaaagtgagttgaatgtaacgtgatttatgtttg 25129528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 35058512 - 35058445
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    ||||||||||||||| ||||||||||  |||||||||||||||  ||| ||| |||||||||| ||||    
T  35058512 aattgattttgagtggattgattctaactaaaagtgagttgaagataaagtgctttatgtttggatat 35058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 340
Target Start/End: Original strand, 48089632 - 48089675
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatg 340  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  48089632 aattgattctagttaaaagtgagttgaatgtaaaatgatttatg 48089675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 55154605 - 55154558
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  55154605 agaattgagtttgagagaattgattttagttaaaagtgagttgaatgt 55154558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 280 - 349
Target Start/End: Original strand, 10853264 - 10853333
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    |||||||| |||||| ||||||||| | |||||||||||||| ||| |||  ||||||||||||| ||||    
T  10853264 agaattgagtttgagagaattgattttggttaaaagtgagtttaatataaattgatttatgtttggatat 10853333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 31084312 - 31084247
Alignment:
Q  279 gagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||  ||||||||| |  ||||||||||||||||||| |  |||||||||||||    
T  31084312 gagaattgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttg 31084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 51285750 - 51285681
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    ||||||||| ||| ||||  | ||||||||||||||||||| ||| | | ||||||||||||||||||||    
T  51285750 tgtttggttttgcggtgagaaaaattgattttgagtgaatttattatggctaaaagtgagttgaatgtaa 51285681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 836011 - 835963
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgta 328  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||    
T  836011 agaattgattttgattgaattgattctggataaaactgagttgaatgta 835963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 3348347 - 3348283
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||| |||||||||||| | |||| |||||||||| ||||||  |||||||||||||    
T  3348347 agaattgagtttaagtgaattgattttggttagaagtgagttggatgtaaattgatttatgtttg 3348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 30300923 - 30300963
Alignment:
Q  284 ttgattttgagtgaattgattctagttaaaagtgagttgaa 324  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  30300923 ttgattttgagtgaattcattctggttaaaagtgagttgaa 30300963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 358989 - 358942
Alignment:
Q  180 ggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  358989 ggtcttctctgtcttagactatggcaccatcccctcaccctaaaattt 358942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 7899120 - 7899183
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||| || |||||||||| ||||||||||  ||||||||||||   ||||||||||||    
T  7899120 gaattgatttggaatgaattgattttagttaaaagatagttgaatgtaaaacgatttatgtttg 7899183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 19877521 - 19877458
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||| |||||  ||||||||| | ||||||||||||||| ||||||  ||||||||||||    
T  19877521 agaattgagtttgaaagaattgattttggttaaaagtgagttggatgtaaattgatttatgttt 19877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 39438903 - 39438825
Alignment:
Q  152 acctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||||||| ||||| |  || || ||||| |||  |||| |||||||||||||||| ||||||||||||||||||    
T  39438903 acctttgtaagtgttctttaaatccaaaagtctttcctaccttgaactggggcaccatccc-tcaccctaaaatttttgt 39438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 42484425 - 42484488
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||| ||| |||||||||||||||| |||||||||| |||| | |||| ||||||| |||||    
T  42484425 agaattaattatgagtgaattgattctggttaaaagtgggttgcaggtaaagtgatttgtgttt 42484488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 36302343 - 36302301
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaa 324  Q
    ||||||||||||||||||||||||  ||||||| |||||||||    
T  36302343 aattgattttgagtgaattgattccggttaaaattgagttgaa 36302301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 41459317 - 41459251
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||||||| |||||||| | | ||||||||||| |||||  |||  |||||||||||||||||    
T  41459317 aattgattttgattgaattgactttggttaaaagtgatttgaagataaattgatttatgtttgaata 41459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 3776667 - 3776622
Alignment:
Q  295 tgaattgattctagttaaaagtgagttgaatgtaacgtgatttatg 340  Q
    |||||||||||| | ||||| |||||||||||||| ||||||||||    
T  3776667 tgaattgattctggctaaaattgagttgaatgtaaagtgatttatg 3776622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 14022132 - 14022091
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttg 322  Q
    |||||||||||||||||||| ||||||  |||||||||||||    
T  14022132 gaattgattttgagtgaatttattctatctaaaagtgagttg 14022091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 16246093 - 16246155
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||||||  |||||||| ||||||||||||||||  ||||||  |||||||||||||    
T  16246093 agaattgagtttgag--aattgattttagttaaaagtgagttagatgtaaattgatttatgtttg 16246155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 31297574 - 31297529
Alignment:
Q  177 gaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||| || |||||||||||| ||||| ||||||||||||    
T  31297574 gaaggtcttccttgccttggactggggaaccatgccctcaccctaa 31297529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 38724500 - 38724459
Alignment:
Q  132 ggagggaggtaaatgtaaatacctttgtaagtgctctttgag 173  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  38724500 ggagggaggtaaacgtaaatccctttgtaagtgctatttgag 38724459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 44939413 - 44939458
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaat 325  Q
    |||||||| |||||||||||||||| |  |||||||||||||||||    
T  44939413 agaattgaatttgagtgaattgattttgattaaaagtgagttgaat 44939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 46018746 - 46018693
Alignment:
Q  283 attgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatt 336  Q
    |||||||||||||||||||||||||| ||||  ||||||||  |||| ||||||    
T  46018746 attgattttgagtgaattgattctagctaaagatgagttgatagtaaagtgatt 46018693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 48189439 - 48189488
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||| |||||| ||||||||| |  |||||||||||||||||||||    
T  48189439 agaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaa 48189488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 8424727 - 8424771
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaa 324  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||    
T  8424727 agaattgagtttgagagaattgattttggttaaaagtgagttgaa 8424771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 10334242 - 10334178
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||| |||||||| | |  |||||||||||||    
T  10334242 agaattgagtttgagagaattgattttggttaaaagtcagttgaatatgaattgatttatgtttg 10334178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 21225094 - 21225030
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||  ||||||  |||| ||||||||    
T  21225094 agaattgagtttgagagaattgattttggttaaaagtgagtttgatgtaaattgatatatgtttg 21225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 26519768 - 26519704
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  | ||||||||||||||||| |  |||||||||||||    
T  26519768 agaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttg 26519704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 33548402 - 33548342
Alignment:
Q  288 ttttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| |||||||||| ||||| |||| ||||||||| | | || |||||||||||||||    
T  33548402 ttttgaatgaattgattttagtttaaagggagttgaatatgaagtaatttatgtttgaata 33548342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 38172304 - 38172368
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||| | |||| |  |||||||||||||    
T  38172304 agaattgagtttgagagaattgattttggttaaaagtgagtgggatgtgaattgatttatgtttg 38172368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 39623823 - 39623887
Alignment:
Q  159 taagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||| | |||||| ||||| ||||||| | |||||||||| || ||||||| |||||||||||    
T  39623823 taagtgttttttgagtccgaatgtcttccttttcttggactgtgggaccatcctctcaccctaaa 39623887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 52966806 - 52966870
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||||||||| | ||||||||||| ||  |||| |  |||||||||||||    
T  52966806 agaattgattttgagagaattgattttggttaaaagtgactttgatgtgaattgatttatgtttg 52966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 53568070 - 53568026
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    |||||| ||||||  |||||| |||||||||||||||||||||||    
T  53568070 tgtttgattatgcgatgatgaaaattgattttgagtgaattgatt 53568026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 35163852 - 35163746
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35163852 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 35163753  T
Q  225 tttttgt 231  Q
    |||||||    
T  35163752 tttttgt 35163746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 20685354 - 20685461
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  20685354 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccttcaccctaaa 20685453  T
Q  224 atttttgt 231  Q
    ||||||||    
T  20685454 atttttgt 20685461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 17948713 - 17948814
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  17948713 ctttggagagaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactgggacaccatcccctcaccttaaaattt 17948812  T
Q  228 tt 229  Q
    ||    
T  17948813 tt 17948814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 2711847 - 2711736
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||      ||||||||||    
T  2711847 agccccactagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgccttgga------caccatcccc 2711754  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||||||||||    
T  2711753 tcaccctaaaatttttgt 2711736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 19686930 - 19686827
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||  ||| |||||||||| |||||||||||||||||    
T  19686930 gtgcctttgtagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatctttcctcccttagactggggcatcatcccctcaccctaaa 19686831  T
Q  224 attt 227  Q
    ||||    
T  19686830 attt 19686827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 15070154 - 15070254
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||| ||| ||| |||||||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||    
T  15070154 gtgcctttggagggaggtaaatataattacatttgtaagtgttcattgagcccgaaggtcttccctgccttagactggggcaccatcccctcacccaaaa 15070253  T
Q  224 a 224  Q
    |    
T  15070254 a 15070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 14505626 - 14505521
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||| ||||||||||||||||||||| ||||||||||| |  |||||| || ||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  14505626 gtgcttttggagggaggtaaatgtaa-tacctttgtaaatattctttgggcgcgaagatcttccgtgccttggactggggcaccatcccctca-cctaaa 14505529  T
Q  224 atttttgt 231  Q
    ||||||||    
T  14505528 atttttgt 14505521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 24336647 - 24336718
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggac 198  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||| |||||||    
T  24336647 cctttggagggaggtaaatgtaaatacttttgtaagtgttttttgagcctgaagatcttccctgccttggac 24336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 3605764 - 3605900
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattt-tataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| |  ||||||||||||||| || || |||||||||||||| | |  | ||  ||| |||||||||  | |||||||||||||||  |||||    
T  3605764 gaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggacacctctaccatagaagtgatttacatgaaaaatgttgtttgactattt 3605863  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||| ||||||| |||||| ||||||||||||||||    
T  3605864 tgtgtcaaaattgattttggttgtgtaaatgaccaaa 3605900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 16442346 - 16442411
Alignment:
Q  279 gagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  16442346 gagaattgattttgagagaattgattttagttacaagtgagttgaatgtgaattgatttatgtttg 16442411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 882842 - 882782
Alignment:
Q  284 ttgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  882842 ttgagtttgagtgaattgattctagttaaaattgagttgaaggtaaaatgatttatgtttg 882782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 28020523 - 28020594
Alignment:
Q  355 aataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgac 427  Q
    |||| |||||||||||| |||||||||||||||||||||||  | | ||||||||||||||| | ||||||||    
T  28020523 aatataagtgatttgtacgaaaaatgttgtttggatattttaag-tcaaattgcttttgggtttataaatgac 28020594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 34911100 - 34911033
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatt 350  Q
    ||||||||||||||||||||||||    ||||||||||||||| |||| |||||||||||||| |||||    
T  34911100 aattgattttgagtgaattgattccgactaaaagtgagttgaaggtaa-gtgatttatgtttggatatt 34911033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 2234144 - 2234191
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||||||| |||||||||| || |||||||||||||||||||||    
T  2234144 aattgattttgaatgaattgattttacttaaaagtgagttgaatgtaa 2234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 6208060 - 6208107
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  6208060 agaattgattttgagtgaattgattttgattaaaagtgagttgaatgt 6208107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 17829995 - 17830058
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  ||||||||||||    
T  17829995 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 17830058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 34026390 - 34026454
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaa 324  Q
    ||||||||| ||| ||||  |||||  |||||||||||||||||||| | |||||||||||||||    
T  34026390 tgtttggttttgctgtgacaagaatatattttgagtgaattgattctggctaaaagtgagttgaa 34026454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 3816374 - 3816425
Alignment:
Q  293 agtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||| | |||||||||||||||||||| | | ||||||||||    
T  3816374 agtgaattgattctggataaaagtgagttgaatgtaatgcgctttatgtttg 3816425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 28466914 - 28466973
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||||||||| | ||||| ||||||||| |||  ||| ||||||||||    
T  28466914 tgattttgagtgaattgattctggctaaaattgagttgaaggtatagtggtttatgtttg 28466973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 34621041 - 34620982
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| |||||| | || || ||||||||| |||| ||||||||||||||    
T  34621041 tgattttgagtgaatggattctggctagaattgagttgaaggtaaagtgatttatgtttg 34620982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 34736819 - 34736760
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||||||||| | ||||| ||||||||| |||  ||| ||||||||||    
T  34736819 tgattttgagtgaattgattctggctaaaattgagttgaaggtatagtggtttatgtttg 34736760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 34748478 - 34748419
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| |||||| | || || ||||||||| |||| ||||||||||||||    
T  34748478 tgattttgagtgaatggattctggctagaattgagttgaaggtaaagtgatttatgtttg 34748419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 16122000 - 16122066
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||||||||  ||||||||| | ||||||||||| |||| |||||  |||||| ||||||||||    
T  16122000 aattgattttgatagaattgattttggttaaaagtgatttgagtgtaagttgatttgtgtttgaata 16122066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 25208769 - 25208723
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||| || |||||||||||||||||||||  ||||||||||||    
T  25208769 aattgattttaattaaaagtgagttgaatgtaaaatgatttatgttt 25208723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 16548227 - 16548179
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  16548227 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 16548179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 21254876 - 21254939
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||| | |  |||||||||||||||||||||  |||||||||||||    
T  21254876 agaattgagtttgagagaattgaatttgattaaaagtgagttgaatgtaa-ttgatttatgtttg 21254939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 35109710 - 35109827
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35109710 agccccactagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccc 35109809  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||||||||||    
T  35109810 tcaccctaaaatttttgt 35109827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 21577200 - 21577094
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21577200 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 21577101  T
Q  225 tttttgt 231  Q
    |||||||    
T  21577100 tttttgt 21577094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 38265340 - 38265237
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38265340 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 38265241  T
Q  224 attt 227  Q
    ||||    
T  38265240 attt 38265237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 37095309 - 37095209
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37095309 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 37095210  T
Q  228 t 228  Q
    |    
T  37095209 t 37095209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 34721863 - 34721967
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  34721863 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggacttccctgccttggactcgggcaccatcccctcaccctaaa 34721962  T
Q  224 atttt 228  Q
    |||||    
T  34721963 atttt 34721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 38405257 - 38405150
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38405257 gtgcctttggagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 38405158  T
Q  224 atttttgt 231  Q
    | ||||||    
T  38405157 aattttgt 38405150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 12472140 - 12472249
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  12472140 agccccactagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcacgaaggtcttccctgtcttggactggggtaccatcccc 12472239  T
Q  214 tcaccctaaa 223  Q
    ||||||||||    
T  12472240 tcaccctaaa 12472249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 41151205 - 41151309
Alignment:
Q  128 ctttggagggaggtaaatgtaaataccttt-gtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  41151205 ctttggagggaggtaaatgtaattaccttttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaattt 41151304  T
Q  227 tttgt 231  Q
    |||||    
T  41151305 tttgt 41151309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 245367 - 245260
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||| |||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  245367 gtgcccttggagggaggtaaatgtaattatctttgtaaacgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 245268  T
Q  224 atttttgt 231  Q
    ||||||||    
T  245267 atttttgt 245260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 16059456 - 16059356
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16059456 gtgcctttgcagggaggtaaatgtaattacctttgtaagtgctctctgagcccgaaggtcttccctaccttggactggggcaccatcccctcaccctaaa 16059357  T
Q  224 a 224  Q
    |    
T  16059356 a 16059356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 18117047 - 18116947
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18117047 gtgcctttagagggaggtaaatgtaattacctttgtaggtgctctttgaggtcgaagatcttccctgccttggactggggcaccatcccctcaccctaaa 18116948  T
Q  224 a 224  Q
    |    
T  18116947 a 18116947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 45278481 - 45278588
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| ||||| |||||||||| || ||||||||||||||||| | |||||| |||||||||| |||||||||| |||||||||||||||||||||    
T  45278481 gtgcctttgaagggaagtaaatgtaattatctttgtaagtgctctttaaacccgaatgtcttccctgccttggactggagcaccatcccctcaccctaaa 45278580  T
Q  224 atttttgt 231  Q
    ||||||||    
T  45278581 atttttgt 45278588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 11216798 - 11216896
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||||| ||| ||||||||||||    
T  11216798 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttctctactttggactagggcatcattccctcaccctaa 11216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 431
Target Start/End: Complemental strand, 38494361 - 38494189
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataata 358  Q
    ||||||||| ||| |||  || |||||||||||  |||||||||| | |||||||||||||||||||| | ||| ||||||||||  ||  || | ||||    
T  38494361 tgtttggttgtgcggtggcgaaaattgattttgtttgaattgattttggttaaaagtgagttgaatgtgaagtggtttatgtttggttaccttcacaata 38494262  T
Q  359 aaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
     |||||||||||| |||| || |||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  38494261 gaagtgatttgtatgaaatattttgtttggatatttggtgtcaaaattgtttttgagtgtgtaaatgaccaaa 38494189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 48176428 - 48176529
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccct-gtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||| |||||||||||||||||| |||||||||| | |||||||| |||||| ||||||   |||||||||||||||||||||||||||||||    
T  48176428 gtgcctttggaaggaggtaaatgtaaatacttttgtaagtgttttttgagccggaaggttttccctccccttggactggggcaccatcccctcaccctaa 48176527  T
Q  223 aa 224  Q
    ||    
T  48176528 aa 48176529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 28407540 - 28407637
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    |  | |||||| ||||||||||||||||||||||||||||    
T  28407540 cctttagagggaggtaaatgtaaatacttttgtaagtgctctttgagcccgaaggt----caagccttggattggggcaccatcccctcaccctaaaatt 28407635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 431
Target Start/End: Complemental strand, 16353521 - 16353401
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctt 410  Q
    ||||||||||| ||| ||| ||| ||||||||||||||| ||   | |||| | ||||||| | ||||||||||||||||| | ||||| ||||||||||    
T  16353521 aaaagtgagtttaatctaaagtggtttatgtttgaatatctttgcaaaaaaataatttgtatgtaaaatgttgtttggatactgtgtgtcaaaattgctt 16353422  T
Q  411 ttgggtgtgtaaatgaccaaa 431  Q
    || |||||| |||||||||||    
T  16353421 ttaggtgtgcaaatgaccaaa 16353401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 20088977 - 20088842
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | ||||||||||||||||| |||| ||||||||||||||  ||  |||| |  | ||| | |||||| |||||||||||||||||| ||||    
T  20088977 aattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttacctttaaagcagaagagctttgtatgaaaaatgttgtttggatgtttt 20088878  T
Q  396 gtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||| | |||||||||| | |||||||| |||||||    
T  20088877 gtgtcagaattgcttttagatgtgtaaaagaccaaa 20088842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 412
Target Start/End: Complemental strand, 4228643 - 4228539
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| || |||||||||||||| |||  ||||  ||| ||||||||  || |||| |||||||||| ||||||||||| |||||||    
T  4228643 ttaaaagtgagttgaatgaaaagtgatttatgtttggatacctttaagatagaagtgattcatatgaaagatgttgtttgaatattttgtgtcaaaattg 4228544  T
Q  408 ctttt 412  Q
    |||||    
T  4228543 ctttt 4228539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 40561687 - 40561747
Alignment:
Q  284 ttgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  40561687 ttgattttgagtgaattgattctagtaaaaattgagttgaaagtaaagtgatttatgtttg 40561747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 23028713 - 23028816
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    ||||||| |||||| |||||||||| ||||||| |||||| | ||||| |||||||| |||||||  ||| ||||| | |||||||| |||| |||||||    
T  23028713 tgcctttagagggatgtaaatgtaattacctttataagtgttttttgaacccgaaggccttccctaccttagactgagacaccatcctctcatcctaaaa 23028812  T
Q  225 tttt 228  Q
    ||||    
T  23028813 tttt 23028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 45557545 - 45557461
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| ||||||||   ||||||||||||| ||||||||||||   ||||||||||||||| |||| ||||||| ||||||    
T  45557545 tgtttggttttgcagtgacaggaattgattttgaatgaattgattctgactaaaagtgagttgaaggtaaagtgatttgtgtttg 45557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 37148623 - 37148746
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||| ||||||||||| ||  |||||| |||||| |||  ||| | ||| |||||||||||| |||  || ||||||||||||||| ||| |||||||    
T  37148623 ttaaaaatgagttgaatgaaaaatgatttctgtttggatagctttgtgatagaagtgatttgtatgaatgatattgtttggatattttatgtcaaaattg 37148722  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
     |||| | ||||||||||||||||    
T  37148723 attttcgttgtgtaaatgaccaaa 37148746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 29829296 - 29829358
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||| |||||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  29829296 aattgattctgaatgaattgattctggctaaaaatgagttgaatgtaaagtgatttatgtttg 29829358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 44967385 - 44967451
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||||||    
T  44967385 aattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgaata 44967451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 10371942 - 10372006
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  10371942 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 10372006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 431
Target Start/End: Original strand, 33936844 - 33936956
Alignment:
Q  320 ttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgt 418  Q
    |||||||||| ||||||||||||||  ||  || | || |||||||||||||| |||||||||||||||||| |||||  | | | |||||||| | |||    
T  33936844 ttgaatgtaaagtgatttatgtttgcttaccttcaaaacaaaagtgatttgtatgaaaaatgttgtttggatgttttgaatcagacttgcttttagatgt 33936943  T
Q  419 gtaaatgaccaaa 431  Q
    ||||| |||||||    
T  33936944 gtaaaagaccaaa 33936956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 41841240 - 41841180
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtt 342  Q
    |||||||||||| |||||||||| || || ||||||| |||||||||| ||||||||||||    
T  41841240 aattgattttgaatgaattgattttacttgaaagtgacttgaatgtaaagtgatttatgtt 41841180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 48459835 - 48459771
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  48459835 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 48459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 1766570 - 1766463
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataa 359  Q
    ||||||||||||  |||| ||||||||||||||| | |||||||| |  ||||||||||||||||  |||  |||||||| |||| |||  |||  ||||    
T  1766570 tgtttggttatgttgtgacgagaattgattttgattaaattgattttgattaaaagtgagttgaacctaaattgatttatatttggataccttaacataa 1766471  T
Q  360 aagtgatt 367  Q
    ||||||||    
T  1766470 aagtgatt 1766463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 38230193 - 38230106
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||||| ||| || ||||||||| | |||||||||||||||||||| |  ||||||||||||| |||  || || |||||||||||    
T  38230193 agaattgaatttaagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatacattttattaaaagtgatt 38230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 33853411 - 33853473
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||| |||||||||||||| | ||| |||||||||||  ||| ||||||||||||||    
T  33853411 aattgatttttagtgaattgattctggctaagagtgagttgaagctaaagtgatttatgtttg 33853473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 3342915 - 3342851
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| ||||||||||||||||| || | |  |||||||||||||    
T  3342915 agaattgagtttgagagaattgattttagttaaaagtgagttggatatgaattgatttatgtttg 3342851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 3622444 - 3622508
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  3622444 agaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 3622508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 26975301 - 26975349
Alignment:
Q  300 tgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||| |||||| |||||||||||||||||  |||||||||||||||||    
T  26975301 tgattttagttataagtgagttgaatgtaaaatgatttatgtttgaata 26975349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 37639555 - 37639491
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||| |||||||| |  |||||||||||||    
T  37639555 agaattgagtttgagagaattgattttggttaaaagtgaattgaatgtgaattgatttatgtttg 37639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 42752175 - 42752239
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||   ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  42752175 agaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttg 42752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 44570682 - 44570730
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttga 345  Q
    ||||||||| | |||||| |||||||||||||| |||||||||||||||    
T  44570682 aattgattcaacttaaaattgagttgaatgtaaagtgatttatgtttga 44570730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 39234853 - 39234896
Alignment:
Q  185 tccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    |||||| | |||||||||||||||||||||||||| ||||||||    
T  39234853 tccctgccatggactggggcaccatcccctcacccaaaaatttt 39234896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 367
Target Start/End: Original strand, 39634149 - 39634236
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||||||||||   ||||||||| | |||||||||||||||||| | |  ||||||||||||| |||  ||| || ||||||||||    
T  39634149 agaattgattttgttagaattgattttggttaaaagtgagttgaatatgaattgatttatgtttggataacttaaaacaaaagtgatt 39634236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 3750809 - 3750747
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||| |||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  3750809 aattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 3750747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 38510377 - 38510415
Alignment:
Q  310 taaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  38510377 taaaagtgagttgaatataaagtgatttatgtttgaata 38510415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 40491772 - 40491726
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattct 306  Q
    ||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  40491772 tgtttggttctgcggtgacaagaattgattttgagtgaattgattct 40491726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 45823329 - 45823267
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||| ||||||||||    | |||||||||||||||| || ||||||||||||||    
T  45823329 aattgattttgattgaattgatttcgatcaaaagtgagttgaatgaaatgtgatttatgtttg 45823267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 42740515 - 42740454
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||| |||||| ||||||||| | ||||||||| |||||||||| |  ||||||||||||    
T  42740515 aattgagtttgagagaattgattttggttaaaagtaagttgaatgttaattgatttatgttt 42740454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 46541725 - 46541660
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttga 345  Q
    |||||||| |||||| ||||||||| | |||| ||||||||||||||| |  || |||||||||||    
T  46541725 agaattgagtttgagagaattgattttggttagaagtgagttgaatgtgaattggtttatgtttga 46541660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 12964723 - 12964659
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||||||  |||||||| | |||| ||||||||||||||||   |||||||||||||    
T  12964723 agaattgagtttgagataattgattttcgttataagtgagttgaatgtagattgatttatgtttg 12964659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 15311228 - 15311264
Alignment:
Q  308 gttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||||||||||  ||||||||||||||    
T  15311228 gttaaaagtgagttgaatgtatagtgatttatgtttg 15311264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 16079511 - 16079463
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| | ||| ||||||||||||||| || ||||||||||||||    
T  16079511 gaattgattttggtttaaagtgagttgaatgaaaagtgatttatgtttg 16079463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 36270832 - 36270872
Alignment:
Q  283 attgattttgagtgaattgattctagttaaaagtgagttga 323  Q
    ||||||||||| |||||||||| || |||||||||||||||    
T  36270832 attgattttgaatgaattgattttaattaaaagtgagttga 36270872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 37562695 - 37562631
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||| || ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  37562695 agaattgagtttaagagaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttg 37562631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 40422973 - 40422893
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatg 340  Q
    ||||||||||||||  ||  | || |||||| || |||||||||| || |||||||| |||||||||||| || |||||||    
T  40422973 tgtttggttatgcaccgacaaaaaatgatttcgaatgaattgattttacttaaaagttagttgaatgtaaagtaatttatg 40422893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 41715782 - 41715718
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||| || ||||||||| |  |||||||||||||  ||||||  |||||||||||||    
T  41715782 agaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 41715718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 47022044 - 47021980
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||| ||||||| || |  |||||||||||||    
T  47022044 agaattgagtttgagagaattgattttggttaaaagtaagttgaaagtgaattgatttatgtttg 47021980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 4e-49; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 11404034 - 11404137
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11404034 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 11404133  T
Q  228 ttgt 231  Q
    ||||    
T  11404134 ttgt 11404137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 22711539 - 22711645
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  22711539 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccttgccttggactggggcaccatcccctcatcctaaaa 22711638  T
Q  225 tttttgt 231  Q
    |||||||    
T  22711639 tttttgt 22711645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 19723340 - 19723447
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  19723340 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccaaagatcttccctgccttggactggggcaccatcccctcaccctaaa 19723439  T
Q  224 atttttgt 231  Q
    ||||||||    
T  19723440 atttttgt 19723447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 17095579 - 17095679
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17095579 gtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 17095678  T
Q  224 a 224  Q
    |    
T  17095679 a 17095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 32296742 - 32296638
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  32296742 gtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccatcccctcaccctaaa 32296643  T
Q  224 atttt 228  Q
    |||||    
T  32296642 atttt 32296638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 36261679 - 36261782
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||||    
T  36261679 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttgaactggggcaccatcccctcaccttaaaattt 36261778  T
Q  228 ttgt 231  Q
    ||||    
T  36261779 ttgt 36261782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 28739674 - 28739557
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||    
T  28739674 agccccactagtgcctttggaggaaagtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgcagcaccatcccc 28739575  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||| ||||||    
T  28739574 tcaccctaaaaattttgt 28739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 29767217 - 29767322
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29767217 gtgcctttgaagggaggtaaat--aattacctttgtaagtgttctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 29767314  T
Q  224 atttttgt 231  Q
    ||||||||    
T  29767315 atttttgt 29767322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 4840169 - 4840272
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||    
T  4840169 gtgcctttggagggaggtaaatgtcattaccattgtaagtgctctttgagtccaaaggtcttccctgccttggactagggcaccatcccctcaccctaaa 4840268  T
Q  224 attt 227  Q
    ||||    
T  4840269 attt 4840272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 41553318 - 41553421
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  41553318 ctttggaggaacgtaaatgtaaatacctttgtaagtgttctttgagctcgaaggtcttccctgccttagactggagcaccatcccctcaccctaaaattt 41553417  T
Q  228 ttgt 231  Q
    ||||    
T  41553418 ttgt 41553421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 11909509 - 11909419
Alignment:
Q  141 taaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  11909509 taaatgtaaatacctttctaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaaattttgt 11909419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 30682858 - 30682971
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  30682858 agccccactggtgcctttggagagagataaatgtaaatacttttgtaagtgttctttgagcccgaagatcttccctgccttggact-gggcaccatcccc 30682956  T
Q  214 tcaccctaaaatttt 228  Q
    ||||| |||||||||    
T  30682957 tcaccttaaaatttt 30682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 21355092 - 21354986
Alignment:
Q  119 caccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcacc 218  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    |||||||||    
T  21355092 cacccgtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggca----cccctcacc 21354997  T
Q  219 ctaaaattttt 229  Q
     ||||||||||    
T  21354996 ttaaaattttt 21354986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 11610309 - 11610416
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||  |||||||| |||||| ||||||||||||| ||| |||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  11610309 gtgcctttggagaaaggtaaatataaatatctttgtaagtgctgtttaagcccgaaggtcttacttatcttggactggggcaccatcccctcaccctaaa 11610408  T
Q  224 atttttgt 231  Q
    ||||||||    
T  11610409 atttttgt 11610416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 43288105 - 43288206
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| ||||||||||| || | |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| |||    
T  43288105 ctttggagggaggtaaatgtaattacctttgtaattgatttttgagtccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaatttt 43288204  T
Q  228 tt 229  Q
    ||    
T  43288205 tt 43288206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 29970897 - 29970773
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| |||||||||||||||||| | ||| |||||||||||||| |||  |||| |||| || ||||||||| |||||||||| |||| |||||||    
T  29970897 aattgattttagttaaaagtgagttgagtttaaagtgatttatgtttggatacctttacaatagaaatgatttgtatgaaaaatgttatttgaatatttt 29970798  T
Q  396 gtgttaaaattgcttttgggtgtgt 420  Q
     ||||||||||||||||||||||||    
T  29970797 atgttaaaattgcttttgggtgtgt 29970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 24475099 - 24475033
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctg 190  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24475099 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgttctttgagcccgaaggtctttcctg 24475033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 19649281 - 19649165
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | |||||||||||||||||||||| |||||||||||||| |||  || | || |||||||||||||| ||||||| |||||||||| ||||    
T  19649281 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaaaattttgtttggatgtttt 19649182  T
Q  396 gtgttaaaattgctttt 412  Q
    | || | ||||||||||    
T  19649181 gagtcagaattgctttt 19649165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 27879620 - 27879556
Alignment:
Q  167 ctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  27879620 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatttttgt 27879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 28019801 - 28019737
Alignment:
Q  167 ctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  28019801 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatttttgt 28019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 428
Target Start/End: Complemental strand, 39219831 - 39219684
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatg 380  Q
    |||| |||||||  ||||||||| | |||||||||||||| ||| | | |||||||||||||| ||||  | | || ||||||| |||||| ||||||||    
T  39219831 aattaattttgatagaattgattttcgttaaaagtgagtttaatatgaagtgatttatgtttggatatcctcacaacaaaagtgctttgtatgaaaaatg 39219732  T
Q  381 ttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacc 428  Q
    ||||||||||| |  |||| |||||||||||||| ||  |||||||||    
T  39219731 ttgtttggatactcggtgtcaaaattgcttttggatgcataaatgacc 39219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 415
Target Start/End: Complemental strand, 35550302 - 35550198
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctt 410  Q
    ||||||||||| | ||||| ||||||| |||||| ||  || ||| || ||||||||  || |||| |||||||||||||||||||||| ||||||||||    
T  35550302 aaaagtgagtttagtgtaaagtgatttttgtttggatgcttcatagtagaagtgattgatacgaaagatgttgtttggatattttgtgtcaaaattgctt 35550203  T
Q  411 ttggg 415  Q
    |||||    
T  35550202 ttggg 35550198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 12124757 - 12124880
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||| ||||||||||||| || || ||||||||||| |||  ||||| ||| |||||||||  | ||||||||||||| | ||||||| ||| |||||||    
T  12124757 ttaatagtgagttgaatgaaaagttatttatgtttggatacctttatgatagaagtgatttacatgaaaaatgttgttcgaatattttatgtcaaaattg 12124856  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
     |||||| ||||||||||| ||||    
T  12124857 attttggttgtgtaaatgatcaaa 12124880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 27881091 - 27881044
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttg 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27881091 gtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 27881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 28021272 - 28021225
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttg 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28021272 gtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 28021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 35239527 - 35239434
Alignment:
Q  337 tatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 430  Q
    |||||||||||| || | || ||||||||||| || ||||| || | |||||||||||||  ||| |||||||||||| |||||||||||||||    
T  35239527 tatgtttgaatacttcaaaacaaaagtgatttttatgaaaattgatttttggatattttgcattagaattgcttttggatgtgtaaatgaccaa 35239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 2778693 - 2778609
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||  | ||||||||||  ||||| ||||||||| |||||||||||||||  ||| ||||||||| ||||    
T  2778693 tgtttggttatgcagcgacaaaaattgattttatgtgaactgattctagctaaaagtgagttgaagataaagtgatttatttttg 2778609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 2071545 - 2071614
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    ||||||||| ||| | ||||||||||||||||||  ||||||||| |   ||||||||||||||||||||    
T  2071545 tgtttggttctgcggcgatgagaattgattttgacagaattgattttgactaaaagtgagttgaatgtaa 2071614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 2778338 - 2778387
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||||||||| | |||||||| || |||||||||||||||||||||    
T  2778338 agaattgattttgaataaattgattttacttaaaagtgagttgaatgtaa 2778387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 3467645 - 3467576
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||| |||||| ||||    
T  3467645 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttctgtttggatat 3467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 40742237 - 40742172
Alignment:
Q  279 gagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  40742237 gagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 40742172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 22936790 - 22936854
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||| | |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  22936790 agaattaagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 22936854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 31246312 - 31246376
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||   ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  31246312 agaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttg 31246376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 36779487 - 36779431
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt 352  Q
    ||||||||| |  ||||||||||||||||||||| || ||||||||||| |||||||    
T  36779487 gaattgattttgattaaaagtgagttgaatgtaaagtaatttatgtttggatatttt 36779431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 41289055 - 41289119
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| || ||||||||||||||| ||| |  |||||||||||||    
T  41289055 agaattgagtttgagagaattgattttaattaaaagtgagttgattgtgaattgatttatgtttg 41289119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 24183908 - 24183841
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaat 347  Q
    |||||||||||||||||||||||||||   ||||| ||| ||||||| ||  |||||||| |||||||    
T  24183908 agaattgattttgagtgaattgattctgaataaaaatgaattgaatgaaaaatgatttatatttgaat 24183841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 36121542 - 36121589
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||| ||| |||||||||||| | ||||||||||||||||||||    
T  36121542 agaattgagtttaagtgaattgattttggttaaaagtgagttgaatgt 36121589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 10552923 - 10552969
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||| | ||||||||||||||||||||||  ||||||||||||    
T  10552923 aattgattttggttaaaagtgagttgaatgtaaattgatttatgttt 10552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 36108706 - 36108636
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatt 350  Q
    |||||| ||||||||||||||||||  |  ||||||| |||| |||||||  |||||||||| ||||||||    
T  36108706 agaattaattttgagtgaattgattgcatgtaaaagtaagtttaatgtaaaatgatttatgtgtgaatatt 36108636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 10368159 - 10368118
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattg 301  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  10368159 tgtttggtttcgcagtgataagaattgattttgagtgaattg 10368118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 15115682 - 15115779
Alignment:
Q  335 tttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||||| |||| |||| || | ||||||||||||   |||||||||||||||||   ||||| |||||||||||| |||  | |||||||||||    
T  15115682 tttatgtttggatatctttacaaaagaagtgatttgtatataaaatgttgtttggatacagtgtgtcaaaattgcttttaggtacgcaaatgaccaaa 15115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 32767547 - 32767485
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||| |||||||||||||||||| |   ||||||||||||| ||||||  |||||||||||||    
T  32767547 agaattaattttgagtgaattgattatg--taaaagtgagttggatgtaaattgatttatgtttg 32767485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 38715222 - 38715339
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| ||||||||| |||||| | ||||| ||||||||||||||  ||| || | || ||||||||||| ||  ||| || ||||||| ||| ||    
T  38715222 gaattgattttagttaaaattgagttaagtgtaaagtgatttatgtttggttatcttcacaacaaaagtgatttataacaaatatattgtttgaataatt 38715321  T
Q  395 tgtgttaaaattgctttt 412  Q
    ||  ||||||||| ||||    
T  38715322 tggattaaaattgatttt 38715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 44742021 - 44741919
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||| || || ||| | ||| |||||||||||||||    || || | |||||| |||| ||||||||||||  ||||||||||||||||||    
T  44742021 gtgcctttggagagaagttaatattaatccctttgtaagtgctcca--agtcctatggtcttacctgccttggactggggtgccatcccctcaccctaaa 44741924  T
Q  224 atttt 228  Q
     ||||    
T  44741923 ttttt 44741919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 32994131 - 32994175
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||||||| ||||||||||| |||||||||||| |||| |||||    
T  32994131 tgtttggttctgcagtgatgacaattgattttgaatgaactgatt 32994175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 38516394 - 38516346
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| | | ||| |||||||||||||||| ||||||||||||||    
T  38516394 gaattgattttcgataatagtgagttgaatgtaaagtgatttatgtttg 38516346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17064352 - 17064459
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17064352 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttaagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 17064451  T
Q  224 atttttgt 231  Q
    ||||||||    
T  17064452 atttttgt 17064459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 20983106 - 20983001
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||| |||| |||||||||| || ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  20983106 gtgccttcggagagaggtaaatgcaattacatttgtaagtgctctttgagcccgaaagtcttccctgccttggactggggcaccatcccctcaccctaaa 20983007  T
Q  224 attttt 229  Q
    | ||||    
T  20983006 aatttt 20983001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 37976598 - 37976683
Alignment:
Q  143 aatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||| |||| ||||||||||||||||||||||||||||||||    
T  37976598 aatgtaaatacctttgtaagtgctatttgagcccgaaggtttttcctgccttgaactggggcaccatcccctcaccctaaaatttt 37976683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 260 - 431
Target Start/End: Original strand, 32560248 - 32560419
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataata 358  Q
    ||||||||||||| ||||||||||||||||||   | |||||||| |   |||||| |||||| ||| ||  |||||| |||||| ||| |||||| |||    
T  32560248 tgtttggttatgcggtgatgagaattgattttacat-aattgattatgaataaaagcgagttggatgaaaattgatttttgtttggatacttttatgata 32560346  T
Q  359 aaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||||  || ||||||||||||||||||||||||||| |||||||||||| | | || |||||||||||    
T  32560347 aaagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgaccaaa 32560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 41910865 - 41910957
Alignment:
Q  136 ggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    |||||||||||||| || ||||||||||| |||||||||||||| |||||| ||| |||| |||||||||||||||||||||| |||||||||    
T  41910865 ggaggtaaatgtaattaactttgtaagtgttctttgagcccgaatgtcttctctgccttgaactggggcaccatcccctcaccttaaaatttt 41910957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 43152386 - 43152509
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| || |||||||||||||| |||  |||   ||| |||||||||  | ||||||||||||||||||||||||||| |||||||    
T  43152386 ttaaaagtgagttgaatgaaaagtgatttatgtttggatacctttgcgatagaagtgatttacatgaaaaatgttgtttggatattttgtgtcaaaattg 43152485  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
     |||||| ||||||||||||||||    
T  43152486 attttggttgtgtaaatgaccaaa 43152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 3748999 - 3748864
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| |||||||||||||||| ||||||| ||| ||||||||||  ||  || | |||  |||| ||||||| |||| || ||||||||||||||     
T  3748999 aattgattatagttaaaagtgagtttaatgtaaagtggtttatgtttggttaccttcacaattgaagttatttgtatgaaagattttgtttggatatttg 3748900  T
Q  396 gtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||| |||||| ||||||||||||||||||||||||    
T  3748899 gtgtcaaaattacttttgggtgtgtaaatgaccaaa 3748864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 31673863 - 31673956
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    |||||||| |||| |||||||||| |||||| |||||| |||||||||| |||||| |||||| ||||||||||||||||| |||||||||||||    
T  31673863 ctttggagagaggaaaatgtaaatccctttg-aagtgccctttgagccctaaggtcctccctgccttggactggggcaccaacccctcaccctaa 31673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 423
Target Start/End: Complemental strand, 22811128 - 22811000
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||| |||  || | || |||||||||| ||| ||||||||||||||| || |||    
T  22811128 gaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgattagtatgaaaaatgttgtttgcatgttt 22811029  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaa 423  Q
    || || | |||||||||| | ||||||||    
T  22811028 tgagtcagaattgcttttagatgtgtaaa 22811000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 19204028 - 19204150
Alignment:
Q  310 taaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgc 408  Q
    ||||||||||||| ||| || ||||||| |||||| ||| |||||| ||| ||||||||  || ||||||| ||||||||||||||||||| ||||||||    
T  19204028 taaaagtgagttggatgaaaagtgatttttgtttggatacttttatgatagaagtgattcatatgaaaaatattgtttggatattttgtgtcaaaattgc 19204127  T
Q  409 ttttgggtgtgtaaatgaccaaa 431  Q
    |||| | | || |||||||||||    
T  19204128 ttttagttatgaaaatgaccaaa 19204150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 2868363 - 2868499
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||| || |||| | || |||||||||||  |  ||| ||| ||||||||||  |    
T  2868363 gaattgattttagttaaaagtgagttgaatgtaaagtgatttaagtttggatgttttaagaacaaaagtgatttacattaaagatggtgtttggatagct 2868462  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||  | |||||||||||| ||||||||||| ||||||    
T  2868463 tgaatcaaaattgcttttaggtgtgtaaattaccaaa 2868499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 412
Target Start/End: Complemental strand, 24036689 - 24036559
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgt 381  Q
    ||||||||||||  ||||||||| |  | |||||||||||||||||||  ||||||||||||||||||  |  |||||||||||||||||  || ||| |    
T  24036689 aattgattttgatagaattgattttgatgaaaagtgagttgaatgtaaaatgatttatgtttgaatatcattgaataaaagtgatttgtataaacaatat 24036590  T
Q  382 tgtttggatattttgtgttaaaattgctttt 412  Q
    | ||| | || ||| | ||||||||||||||    
T  24036589 tatttaggtaatttatattaaaattgctttt 24036559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 5009515 - 5009416
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||| ||| ||||||||||||  ||||||| || |||||||  ||||||||||||| || |||| ||||| ||| ||||||| |||||||||||||    
T  5009515 ctttggagagagataaatgtaaatatttttgtaaatgttctttgaatccgaaggtcttccatgccttgaactggtgcatcatcccc-caccctaaaattt 5009417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 22482307 - 22482243
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  22482307 agaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 22482243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 39162947 - 39162859
Alignment:
Q  132 ggagggaggtaaatgtaaatacctt-tgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||    |||||||  || |||||||||||||||| |||| ||||||||||    
T  39162947 ggaggaaggtaaatgtaaataccttgtgtaaatgctctttgagcc----ggtcttctgtgccttggactggggcaccgtcccatcaccctaaa 39162859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 18637443 - 18637379
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||||||||||||||||  ||||||||||||||  |||  ||||||| ||||||    
T  18637443 agaattgattttgagtgaattgattctaactaaaagtgagttgagagtacagtgatttgtgtttg 18637379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 7667798 - 7667751
Alignment:
Q  298 attgattctagttaaaagtgagttgaatgtaacgtgatttatgtttga 345  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||||    
T  7667798 attgattctagctataagtgagttgaatgtaaagtgatttatgtttga 7667751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 14299469 - 14299418
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  14299469 aattgattctagataaaagtgagttgaaggtaaagtgatttgtgtttgaata 14299418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 19784930 - 19784867
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||   |||||||||| | |||||||||||||||||||||| ||| ||||||||||    
T  19784930 gaattgattttatttgaattgattttggttaaaagtgagttgaatgtaaagtggtttatgtttg 19784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 33740902 - 33740851
Alignment:
Q  380 gttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||    
T  33740902 gttgtttagatattttgtgtcaaaattgcgtttaggtgtgtaaatgaccaaa 33740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 38255614 - 38255559
Alignment:
Q  171 gagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    |||||| |||||||||||| | |||||||||||||||||| ||||||| |||||||    
T  38255614 gagcccaaaggtcttccctattttggactggggcaccatctcctcaccttaaaatt 38255559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 407
Target Start/End: Original strand, 43045185 - 43045296
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| ||  |||||||||||| | |||||  | ||||||||||  |||  ||||| | |||||||||||||| |||| ||||||||||||||||||    
T  43045185 aattgattttacataaaagtgagtttagtgtaaattaatttatgtttagatacctttattacaaaagtgatttgtatgaaatatgttgtttggatatttt 43045284  T
Q  396 gtgttaaaattg 407  Q
    || | |||||||    
T  43045285 gtatcaaaattg 43045296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 2483710 - 2483772
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||   ||||||||| |||||||||||||||||||||| |  |||||||||||||    
T  2483710 aattgattttgttggaattgattttagttaaaagtgagttgaatgtgaattgatttatgtttg 2483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 15368630 - 15368565
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||||||||||||||||||||| | | ||| ||||||||| | || ||||||||||||||||||    
T  15368630 aattgattttgagtgaattgattctggctgaaattgagttgaagggaa-gtgatttatgtttgaata 15368565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 18303409 - 18303343
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtctt 194  Q
    ||||||||| | ||||| |||||||| |||||||||||||||| | |||||||||||| ||| ||||    
T  18303409 ctttggaggaaagtaaacgtaaatacttttgtaagtgctctttaaacccgaaggtctttcctatctt 18303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 37036733 - 37036844
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctt 410  Q
    ||||||||||| | ||||| ||||||||| |||| ||  || ||| || ||||||||| || |||| |||||||||| |||  |||||| ||||||||||    
T  37036733 aaaagtgagtttagtgtaaagtgatttatctttggatgcttcatagtataagtgatttatatgaaagatgttgtttgaata--ttgtgtcaaaattgctt 37036830  T
Q  411 ttgggtgtgtaaat 424  Q
    |||| | |||||||    
T  37036831 ttggatatgtaaat 37036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 2694754 - 2694797
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttga 323  Q
    |||||||||||||| |||||||||| | ||||||||||||||||    
T  2694754 agaattgattttgattgaattgattttggttaaaagtgagttga 2694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 35237102 - 35237059
Alignment:
Q  184 ttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||    
T  35237102 ttccctgccttggactgaggcaccatcccctcactctaaaattt 35237059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 38031257 - 38031324
Alignment:
Q  161 agtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    ||||||||||||  ||| |||||||| |||||||||||| ||||| ||| | |||||| |||||||||    
T  38031257 agtgctctttgaatccgtaggtcttctctgtcttggactagggcatcatgcactcaccttaaaatttt 38031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 21968782 - 21968815
Alignment:
Q  137 gaggtaaatgtaaatacctttgtaagtgctcttt 170  Q
    ||||||||||||||||| ||||||||||||||||    
T  21968782 gaggtaaatgtaaatacttttgtaagtgctcttt 21968815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 28973986 - 28973949
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  28973986 aaaagtgagttgaatataatgtgatttatgtttgaata 28973949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 33953896 - 33953945
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||| |||||| ||||||||| || |||||||||||||||| ||||    
T  33953896 agaattgagtttgagagaattgattttatttaaaagtgagttgaacgtaa 33953945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 3667972 - 3667908
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  | ||||||||||||||||| |  |||||||||||||    
T  3667972 agaattgagtttgagagaattgattttgttaaaaagtgagttgaatgtgaattgatttatgtttg 3667908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 5969957 - 5970005
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| | | || ||||||||||||||||| ||||||||||||||    
T  5969957 gaattgattttggatataagtgagttgaatgtaaagtgatttatgtttg 5970005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 35760307 - 35760243
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  | ||||||||||||||||| |  |||||||||||||    
T  35760307 agaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttg 35760243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 42439566 - 42439610
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatg 326  Q
    ||||| |||||| ||||||| || |||||||||||||||||||||    
T  42439566 aattgtttttgaatgaattggttttagttaaaagtgagttgaatg 42439610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 4e-49; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17136416 - 17136523
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17136416 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccccgccttggactggggcaccatcccctcaccctaaa 17136515  T
Q  224 atttttgt 231  Q
    ||||||||    
T  17136516 atttttgt 17136523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 2754153 - 2754047
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2754153 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 2754054  T
Q  225 tttttgt 231  Q
    |||||||    
T  2754053 tttttgt 2754047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 45137073 - 45136966
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  45137073 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccttcaccctaaa 45136974  T
Q  224 atttttgt 231  Q
    ||||||||    
T  45136973 atttttgt 45136966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 21637926 - 21638033
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||    
T  21637926 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccaaaggtcttctctgccttggactagggcaccatcccctcaccctaaa 21638025  T
Q  224 atttttgt 231  Q
    ||||||||    
T  21638026 atttttgt 21638033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 36836433 - 36836328
Alignment:
Q  123 ggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||    
T  36836433 ggtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggcaccatcccctcaccttaa 36836334  T
Q  223 aatttt 228  Q
    ||||||    
T  36836333 aatttt 36836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 36380235 - 36380128
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  36380235 gtgcctttggagggaggtaaatgtaattccctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgaggcaccatcccctcaccctaaa 36380136  T
Q  224 atttttgt 231  Q
    ||||||||    
T  36380135 atttttgt 36380128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 40156069 - 40156176
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||    
T  40156069 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctaccttgaactggggcaccatcccctcaccataaa 40156168  T
Q  224 atttttgt 231  Q
    ||||||||    
T  40156169 atttttgt 40156176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 25987765 - 25987657
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtc-ttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  25987765 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaaggtctttccctgccttggtctggggcaccatcccctcaccctaa 25987666  T
Q  223 aatttttgt 231  Q
    |||||||||    
T  25987665 aatttttgt 25987657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 44650422 - 44650526
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  44650422 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaagatcttccctgccttggaccggggcaccatcccctcaccctaaa 44650521  T
Q  224 atttt 228  Q
    |||||    
T  44650522 atttt 44650526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 10745335 - 10745228
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10745335 gtgcctttagagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtattccctgccttggactggggcaccatcccctcaccctaaa 10745236  T
Q  224 atttttgt 231  Q
    ||||||||    
T  10745235 atttttgt 10745228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 558542 - 558435
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||  |||||| |||||||||||||||||||||||||    
T  558542 gtgcctttggagggaggtaaatgtaattacttttgtaagtgctctttgagctagaaggtcttcccttccttggaatggggcaccatcccctcaccctaaa 558443  T
Q  224 atttttgt 231  Q
    ||||||||    
T  558442 atttttgt 558435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 6672896 - 6672802
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcacc 218  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6672896 gtgcctttggagggaggtaaatgtaattacctttgtacgcgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacc 6672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 26690183 - 26690290
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||| |  ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  26690183 gtgcttttggagggaggtaaatgtaattacctttgtaagtgatctttgtgttcgaaggtcttccctgccttggactgaggcaccatcccctcaccctaaa 26690282  T
Q  224 atttttgt 231  Q
    ||||||||    
T  26690283 atttttgt 26690290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 2357175 - 2357072
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  2357175 cctttggagggaggtaaatgtaaataccattgtaaatgct-tttgagttcgaaggtcttccatgccttggactggggcaccatcccctcaccctaaaatt 2357077  T
Q  227 tttgt 231  Q
    |||||    
T  2357076 tttgt 2357072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 33066623 - 33066723
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||| ||||||||||    
T  33066623 ctttggagagaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttctctaccttggactggggcaccatcccctcatcctaaaattt 33066722  T
Q  228 t 228  Q
    |    
T  33066723 t 33066723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 3200910 - 3201017
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||| ||| ||| ||||||||||||||| |||| |||||||    
T  3200910 gtgcctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaagatcttctctgccttagactggggcaccatctcctcgccctaaa 3201009  T
Q  224 atttttgt 231  Q
    ||||||||    
T  3201010 atttttgt 3201017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 5039449 - 5039556
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||| |||||    
T  5039449 gtgcttttagagggaggtaaacgtaattacctttgtaagtgctctttgagcccgaagatcttccctaccttggactagggcaccatcccctcactctaaa 5039548  T
Q  224 atttttgt 231  Q
    ||||||||    
T  5039549 atttttgt 5039556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 21487181 - 21487282
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccat-cccctcaccctaaaatt 226  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  21487181 ctttggagggaggtaaatgtaaatatttttgtaagtgctctttgagcccgaaagtcttccctgccttagactggggcaccatccccctcatcctaaaatt 21487280  T
Q  227 tt 228  Q
    ||    
T  21487281 tt 21487282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 30372783 - 30372682
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| || |||| ||||||| ||||| |||||||||||||    
T  30372783 gtgcctttggaaggaggtaaatgtaaatatctttgttagtgctctttgagcccgaaggtcttccatgccttgaactggggtaccataccctcaccctaaa 30372684  T
Q  224 at 225  Q
    ||    
T  30372683 at 30372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 7860249 - 7860142
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| | ||| ||| ||||||||| |||| ||||||||| |||||||    
T  7860249 gtgcctttggagggaggtaaatgtacatacatttgtaagtgttctttgagcccgaagattttctctgccttggactgaggcatcatcccctctccctaaa 7860150  T
Q  224 atttttgt 231  Q
    ||||||||    
T  7860149 atttttgt 7860142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 13047252 - 13047156
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||| ||| ||||||   ||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  13047252 ctttggagggaggtaaatataattacctt---aagtgctctttgagcccaaagatcttccctgccttggactggagcaccatcccctcaccctaaaattt 13047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 431
Target Start/End: Original strand, 23359927 - 23360077
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatg 380  Q
    |||||||||||   ||||||||| | |||||||||||||||||||||| |||||||||||||| |||  || | || |||||||||| ||| ||||||||    
T  23359927 aattgattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgattagtatgaaaaatg 23360026  T
Q  381 ttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||||| |||||  | | |||||||||| | |||||||| |||||||    
T  23360027 ttgtttggatgttttgaatcagaattgcttttagatgtgtaaaagaccaaa 23360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 4553657 - 4553561
Alignment:
Q  129 tttggagg-gaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    |||||||| ||||||||| ||||||| ||||||||| ||||||||| ||| |||||||| ||||||| |||||||||||||||||||||| ||||||    
T  4553657 tttggaggagaggtaaatataaatacatttgtaagtactctttgagtccggaggtcttctctgtcttagactggggcaccatcccctcactctaaaa 4553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 12110970 - 12110847
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttg 396  Q
    |||||||| | |||||||||||||||||| ||| |||||||||||||| ||| || | || | ||||||||| || ||||| || |||||| ||||||||    
T  12110970 aattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatacttcaaaacataagtgatttttatgaaaactggtgtttgaatattttg 12110871  T
Q  397 tgttaaaattgcttttgggtgtgt 420  Q
      ||| |||||||||||| |||||    
T  12110870 cattagaattgcttttggatgtgt 12110847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 2098875 - 2098825
Alignment:
Q  178 aaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2098875 aaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttt 2098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 37543944 - 37543866
Alignment:
Q  353 ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||| |||||||||| ||||||||||| ||| || |||||||||||||||| |||| | ||||||||||||||||    
T  37543944 ataataaacgtgatttgtatgaaaaatgttgattgaattttttgtgttaaaattgtttttagatgtgtaaatgaccaaa 37543866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 1763316 - 1763192
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | ||||||| |||||||||| ||| |||||||||||||  |||  || | || | ||||||||| || ||||| || ||||||||||||||    
T  1763316 aattgattttggttaaaattgagttgaatttaaagtgatttatgtttagataccttcaaaacagaagtgatttttatgaaaactgatgtttggatatttt 1763217  T
Q  396 gtgttaaaattgcttttgggtgtgt 420  Q
    || ||| ||||||||||||||||||    
T  1763216 gtattagaattgcttttgggtgtgt 1763192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 431
Target Start/End: Complemental strand, 23377589 - 23377465
Alignment:
Q  308 gttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaatt 406  Q
    ||||||||||||||||||||||  ||||||||||||| |||  || | || |||||||||| |||  ||||||||||||||||| |||||  | | ||||    
T  23377589 gttaaaagtgagttgaatgtaagttgatttatgtttggataccttcaaaacaaaagtgattagtataaaaaatgttgtttggatgttttgaatcagaatt 23377490  T
Q  407 gcttttgggtgtgtaaatgaccaaa 431  Q
    |||||| | |||||||| |||||||    
T  23377489 gcttttagatgtgtaaaagaccaaa 23377465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 428
Target Start/End: Original strand, 11005706 - 11005836
Alignment:
Q  300 tgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaa-aaatgttgtttggatattttgt 397  Q
    ||||| ||||||| ||||| ||||||||||  ||||||||||||| ||| ||||| ||||||||||||||||  |||    | |||||||||||||||||    
T  11005706 tgattttagttaatagtgacttgaatgtaaaatgatttatgtttggatatttttacaataaaagtgatttgtgtgaatgtgtattgtttggatattttgt 11005805  T
Q  398 gttaaaattgcttttgggtgtgtaaatgacc 428  Q
    | |||||| ||||||| | ||| ||||||||    
T  11005806 ggtaaaatcgcttttgagcgtgcaaatgacc 11005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 10918715 - 10918652
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||| ||||||| |||||||||| | | |||||||||||||||||||| ||||||||||||||    
T  10918715 gaattaattttgactgaattgattttggataaaagtgagttgaatgtaaagtgatttatgtttg 10918652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 14531978 - 14532092
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| || ||||||| |||||| |||  |||| |||||||||||||||||         |||||||| ||||| |||| |||||||    
T  14531978 ttaaaagtgagttgaatgaaaagtgatttgtgtttggatacctttacaataaaagtgatttgta---------ttgtttgggtatttcgtgtcaaaattg 14532068  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
     |||||| ||||||||||||||||    
T  14532069 tttttggttgtgtaaatgaccaaa 14532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 31224793 - 31224706
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||||| |||||  ||||||||| ||||||||||||||||| |||| |  ||||||||||||| |||| || || |||||||||||    
T  31224793 agaattgagtttgaaagaattgattttagttaaaagtgagttggatgtgaattgatttatgtttggatatattttactaaaagtgatt 31224706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 431
Target Start/End: Complemental strand, 5055266 - 5055130
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataat--aaaagtgatttgtaggaaaaatgttgtttggatatt 393  Q
    ||||||||| | |||||||||||||| ||  ||| ||| ||| ||||||||||  ||  |||  |||| ||||||||| | || ||| ||||||||||||    
T  5055266 gaattgattttggttaaaagtgagtttaacataaagtggtttgtgtttgaataccttc-aatgcaaaattgatttgtatgtaagatgatgtttggatatt 5055168  T
Q  394 ttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||| ||||||||||||| | ||| |||||||||||    
T  5055167 ttgtgtcaaaattgcttttgagcgtggaaatgaccaaa 5055130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 1945034 - 1945098
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  1945034 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 1945098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 29968937 - 29968981
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  29968937 tgattttgaatgaattgattttagttaaaagtgagttgaatgtaa 29968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 42770420 - 42770541
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| ||  |||| |||||||| |||| ||||  ||||||||||||  || || | ||||||||||||||  |||||| |||||||    
T  42770420 ttaaaagtgagttgaatgaaaattgatctatgtttggatatctttaagataaaagtgattcttatgagagatgttgtttggata--ttgtgtcaaaattg 42770517  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
    ||||| | | || |||||||||||    
T  42770518 cttttagttatgaaaatgaccaaa 42770541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 3854012 - 3853949
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||  ||||||||| |  |||||||||||||||||||||  |||||||||||||    
T  3854012 gaattgattttgatagaattgattttgattaaaagtgagttgaatgtaaattgatttatgtttg 3853949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 4119369 - 4119420
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  4119369 aattgattctagctaaaagtgagtctaatgtaaagtgatttatgtttgaata 4119420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 4894090 - 4894145
Alignment:
Q  288 ttttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    ||||||||||||||||||||| ||||| | ||||||| |||| |||||||||||||    
T  4894090 ttttgagtgaattgattctagctaaaattaagttgaaggtaaagtgatttatgttt 4894145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 14821275 - 14821228
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  14821275 agaattgagtttgagtgaattgattttagttaaaagtgagtttaatgt 14821228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 29844252 - 29844146
Alignment:
Q  318 agttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggt 416  Q
    ||||||| |||| ||||||||||||||  ||  || | || |||||||||||||| |||||||||||||||||| ||||| || | |||| ||||| | |    
T  29844252 agttgaaggtaaagtgatttatgtttggttaccttcaaaacaaaagtgatttgtatgaaaaatgttgtttggatgttttgagtcataattacttttagat 29844153  T
Q  417 gtgtaaa 423  Q
    |||||||    
T  29844152 gtgtaaa 29844146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 26806266 - 26806400
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| |  ||||||||||||||| || || |||||||||||||| |||  ||||  ||| ||||||||  || |||| || |||||||||||  |    
T  26806266 gaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggatacctttaagatagaagtgattcatatgaaagatattgtttggata--t 26806363  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||| |||||||||||| | | || |||||||||||    
T  26806364 tgtgtcaaaattgcttttagttatgaaaatgaccaaa 26806400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 9988496 - 9988560
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  9988496 agaattgagtttgagagaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttg 9988560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 25747877 - 25747940
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  |||||||||||||||||||||  |||||||||||||    
T  25747877 agaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaa-ttgatttatgtttg 25747940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 30007548 - 30007612
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||| ||| | |||||||||||||||||||| |  |||||||||||||    
T  30007548 agaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttg 30007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 30477280 - 30477240
Alignment:
Q  133 gagggaggtaaatgtaaatacctttgtaagtgctctttgag 173  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  30477280 gagggaggtaaatctaaatacctttgtaagttctctttgag 30477240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 30503387 - 30503303
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||| |||  | ||| |||||||||||||||||||||   ||||||| ||||||| ||||  |||||| ||||||    
T  30503387 tgtttggttatgcaatgacaataatcgattttgagtgaattgattctgactaaaagttagttgaaggtaaactgatttttgtttg 30503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 5916237 - 5916284
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  5916237 agaattaattttgagagaattgattttggttaaaagtgagttgaatgt 5916284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 36312389 - 36312342
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  36312389 agaattaattttgagagaattgattttggttaaaagtgagttgaatgt 36312342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 38600447 - 38600506
Alignment:
Q  289 tttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| ||||||||| | ||||||||||||||  ||||||  |||||||||||||||||    
T  38600447 tttgagagaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttgaata 38600506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 7632521 - 7632583
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||||||| |||||  |||||||||| ||||| |||| ||||| | ||||||    
T  7632521 aattgattttgagtgaatttattctgattaaaagtgaattgaaggtaaagtgatatgtgtttg 7632583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 37402198 - 37402228
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||||||||||||||||||||||||||    
T  37402198 aattgattctagttaaaagtgagttgaatgt 37402228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 3476356 - 3476417
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||||| |||||||||||||| | |||||||||| |||| || | ||||| |||||||    
T  3476356 aattgattttaagtgaattgattctggataaaagtgagctgaaagtgaagtgatatatgttt 3476417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 8170425 - 8170376
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||| |||||| ||||||||| |  |||||||||||||||||||||    
T  8170425 agaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaa 8170376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 15220817 - 15220850
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||||||| ||||||||||||||    
T  15220817 aaaagtgagttgaatgtaaagtgatttatgtttg 15220850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 20961510 - 20961551
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgc 165  Q
    ||||| |||||||||||||||||||||| | |||||||||||    
T  20961510 gtgcccttggagggaggtaaatgtaaatccatttgtaagtgc 20961551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 32827661 - 32827620
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttga 323  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||    
T  32827661 aattgattttgagtgaattgattttagataaaaatgagttga 32827620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 2213619 - 2213555
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  | ||||||||||||||||| |  |||||||||||||    
T  2213619 agaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttg 2213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 7295343 - 7295407
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||||| ||||||| ||||||  | ||||  |||||||||||||    
T  7295343 agaattgagtttgagagaattgattctggttaaaaatgagtttgacgtaaattgatttatgtttg 7295407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 34433301 - 34433365
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||  ||||||||| |  ||||||||||||||||||| |  |||||||||||||    
T  34433301 agaattgagtttgacagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttg 34433365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 37745789 - 37745833
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||||||| ||| ||||| | |||||||||||||||||||||||    
T  37745789 tgtttggttttgcggtgataataattgattttgagtgaattgatt 37745833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 41031465 - 41031508
Alignment:
Q  300 tgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||    
T  41031465 tgattctagttaatagtgagttaaatgtaa-gtgatttatgtttg 41031508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 6e-48; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 46494511 - 46494394
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  46494511 agccccactagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcccc 46494412  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||| ||||||    
T  46494411 tcaccctaaaaattttgt 46494394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 29576444 - 29576551
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  29576444 gtgcctttggagggaggtaaatgtaaataactttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccaccccctcaccctaaa 29576543  T
Q  224 atttttgt 231  Q
    ||||||||    
T  29576544 atttttgt 29576551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 51714078 - 51713961
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  51714078 agccccactagtgcctttgaagggaggtaaatataaatacctttgtaagtgctctttgagcccgaaggtcttccctgctttgaactggggcaccatcccc 51713979  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||||||||||    
T  51713978 tcaccctaaaatttttgt 51713961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 7173688 - 7173584
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7173688 gtgcctttggaaggaggtaaatgtcaatacctttgtaagtgctctttgagcccgaaggtcttccctgcgttggactggggcaccatcccctcaccctaaa 7173589  T
Q  224 atttt 228  Q
    |||||    
T  7173588 atttt 7173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 51066522 - 51066622
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51066522 gtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 51066621  T
Q  224 a 224  Q
    |    
T  51066622 a 51066622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 55231716 - 55231823
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  55231716 gtgcctttgaagggaggtaaatgtaaatacttttgtaagtgctctttgagcctgaatgtcttccctgccttggactggggcaccatcccctcaccctaaa 55231815  T
Q  224 atttttgt 231  Q
    ||||||||    
T  55231816 atttttgt 55231823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 36192560 - 36192673
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36192560 agccccactagtgcctttggagggaggtaaatgtaattacttttgtaaatgctctttgagcccgaaggtcttccctaccttggactggggcaccatcccc 36192659  T
Q  214 tcaccctaaaattt 227  Q
    ||||||||||||||    
T  36192660 tcaccctaaaattt 36192673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 30970487 - 30970383
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  30970487 gtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctaccttagactggggcaccatcccctcaccctaaa 30970388  T
Q  224 atttt 228  Q
    |||||    
T  30970387 atttt 30970383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 32139197 - 32139298
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||| |||    
T  32139197 ctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaaggtcttctctgccttggactggggcaccatcccttcaccctaaatttt 32139296  T
Q  228 tt 229  Q
    ||    
T  32139297 tt 32139298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 2570229 - 2570337
Alignment:
Q  123 ggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||||||||||||||| |||||| | || ||| || |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  2570229 ggtgcctttggagggaggtaaatataaatatcattataaatgttctttgagtccgaagatcttccctgccttggactggggcaccatcccctcaccctaa 2570328  T
Q  223 aatttttgt 231  Q
    |||||||||    
T  2570329 aatttttgt 2570337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 41523430 - 41523533
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||| ||||||||| ||| ||||||| ||    
T  41523430 ctttggagggaggtaaatgtaaatacctttataagtgctctttgagctcgaaggtcttccctatcttggattgggacaccatcccttcatcctaaaaatt 41523529  T
Q  228 ttgt 231  Q
    ||||    
T  41523530 ttgt 41523533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 676766 - 676864
Alignment:
Q  133 gagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||| ||| ||||||||||||    
T  676766 gagggaggtaagtgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactgtaacaccatccccttaccttaaaatttttgt 676864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 22304175 - 22304090
Alignment:
Q  143 aatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttt 228  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  22304175 aatgtcaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcctctcaccctaaaatttt 22304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 39863881 - 39863777
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||  ||||||||| | ||| ||||||||||||||||    
T  39863881 gtgcctttggagggaagtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttctctaccttggactgagacactatcccctcaccctaaa 39863782  T
Q  224 atttt 228  Q
    |||||    
T  39863781 atttt 39863777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 50905777 - 50905884
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||| ||||||||||||| || ||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||||  ||||||||||    
T  50905777 gtgcctttggagagaggtaaatgtaattatctttgtaggtgctctttgagtccgaaggtcttccatgccttgaactggggcaccatcctttcaccctaaa 50905876  T
Q  224 atttttgt 231  Q
    ||||||||    
T  50905877 atttttgt 50905884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 8740477 - 8740550
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttgga 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  8740477 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccatgccttgga 8740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 47627106 - 47626989
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  ||||||||| |||||||||||||||||||||| | ||| | |||||||| | ||||||||||||||| ||||||||||  ||||||| ||    
T  47627106 agccccactagtgcctttgaagggaggtaaatgtaaatacctctataaatactctttgaactcgaaggtcttccctgccttggactggaacaccatctcc 47627007  T
Q  214 tcaccctaaaatttttgt 231  Q
    ||||||||||||||||||    
T  47627006 tcaccctaaaatttttgt 47626989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 4080651 - 4080548
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||| | ||| |||||| |||||||||| ||| ||||||||||||| || ||||||||    
T  4080651 ctttggagggaggtaaatgtaattacatttgtaaatgctctttgagtctgaatgtcttctctgtcttggattggagcaccatcccctcgccttaaaattt 4080552  T
Q  228 ttgt 231  Q
    ||||    
T  4080551 ttgt 4080548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 51279127 - 51279035
Alignment:
Q  133 gagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaat 225  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||   |||||| |  ||||||||||||||||||||||||    
T  51279127 gagggaggtcaatgtaaatacttttgtaagtgctctttgagcccaaaggtcttcccaaccttggattaaggcaccatcccctcaccctaaaat 51279035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 431
Target Start/End: Complemental strand, 20677133 - 20676987
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgt 384  Q
    ||||||||| |||||||||| |  | |||||||| || | ||||| |||||||||||||| ||| || ||| || ||||||||| ||  |||  ||||||    
T  20677133 tgattttgattgaattgattttgatcaaaagtgaatttagtgtaaagtgatttatgtttggatacttcatagtagaagtgatttatacaaaagttgttgt 20677034  T
Q  385 ttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||||||||||||| |||||||||||||| | ||||||| ||||||    
T  20677033 ttggatattttgtgtcaaaattgcttttggatatgtaaattaccaaa 20676987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 260 - 412
Target Start/End: Complemental strand, 22699851 - 22699698
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataata 358  Q
    ||||||||| ||| ||||  | |||||||||||   ||||||||| | ||||||||| |||||||||||| |||||||||||||| |||  || | || |    
T  22699851 tgtttggttgtgcggtgaaaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaaca 22699752  T
Q  359 aaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 412  Q
    ||||||||||||| ||||||| |||||||||| ||||| || | ||||||||||    
T  22699751 aaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgctttt 22699698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 431
Target Start/End: Original strand, 14597650 - 14597773
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| || |||||||||||||| |||| ||||  ||| ||||||||  || || | |||||||||||||||||||||| |||||||    
T  14597650 ttaaaagtgagttgaatgaaaagtgatttatgtttggatatctttaagatagaagtgattcttatgagagatgttgtttggatattttgtgtcaaaattg 14597749  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
    ||||| | | || |||||||||||    
T  14597750 cttttagttatgaaaatgaccaaa 14597773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 412
Target Start/End: Original strand, 22980701 - 22980832
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatg 380  Q
    |||||||||||   ||||||||| | ||||||||| |||||||||||| |||||||||||||| |||  || | || |||||||||||||| |||||||     
T  22980701 aattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaaaatt 22980800  T
Q  381 ttgtttggatattttgtgttaaaattgctttt 412  Q
    |||||||||| ||||| || | ||||||||||    
T  22980801 ttgtttggatgttttgagtcataattgctttt 22980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 412
Target Start/End: Original strand, 22994288 - 22994419
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatg 380  Q
    |||||||||||   ||||||||| | ||||||||| |||||||||||| |||||||||||||| |||  || | || |||||||||||||| |||||||     
T  22994288 aattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaaaatt 22994387  T
Q  381 ttgtttggatattttgtgttaaaattgctttt 412  Q
    |||||||||| ||||| || | ||||||||||    
T  22994388 ttgtttggatgttttgagtcataattgctttt 22994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 423
Target Start/End: Complemental strand, 46958110 - 46957968
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatg 380  Q
    ||||||||||||  ||||||||| | ||||||||||||||||| |||| || |||||||||||  ||  || | || | ||||| |||||| ||||||||    
T  46958110 aattgattttgatagaattgattttggttaaaagtgagttgaacgtaaagtaatttatgtttggttaccttcaaaacagaagtgctttgtatgaaaaatg 46958011  T
Q  381 ttgtttggatattttgtgttaaaattgcttttgggtgtgtaaa 423  Q
    |||||||||| |||||||| | |||||||||| | ||||||||    
T  46958010 ttgtttggatgttttgtgtcagaattgcttttagatgtgtaaa 46957968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 20232055 - 20231919
Alignment:
Q  297 aattgattctagttaaaagtgagtt-gaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    |||||||| | ||||||||| |||| ||||| || ||| |||||||||  |||| |||| |||| |||||||||||| |||| ||||||||| |||||||    
T  20232055 aattgattttggttaaaagttagtttgaatgaaaagtgttttatgtttagatatatttacaatagaagtgatttgtatgaaatatgttgtttagatattt 20231956  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||| |||||||||||||| | | || |||||||||    
T  20231955 tgtgtcaaaattgcttttggttatatagatgaccaaa 20231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 36150713 - 36150621
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt 352  Q
    ||||||||| ||| |||| |||||||||||||||   |||||||| |  ||||||||||||||||||||| |||||||||||||| |||||||    
T  36150713 tgtttggttgtgcggtgacgagaattgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttggatatttt 36150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 38306201 - 38306264
Alignment:
Q  368 tgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  38306201 tgtatgaaaaatgttgtttggatattttatgttaaaattacttttgggtatgtaaatgaccaaa 38306264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 431
Target Start/End: Original strand, 1589629 - 1589743
Alignment:
Q  318 agttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggt 416  Q
    |||||||||||| |||||| ||||||| ||   ||||  |||||| ||||||||| ||||| | ||||||||||||||| |||| ||||||||||| |||    
T  1589629 agttgaatgtaaagtgattcatgtttggatgcctttaatataaaattgatttgtatgaaaagtattgtttggatattttatgttgaaattgctttttggt 1589728  T
Q  417 gtgtaaatgaccaaa 431  Q
     ||||||||||||||    
T  1589729 ttgtaaatgaccaaa 1589743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 2294813 - 2294719
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||| |||||||||||| |||      ||||| || ||||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||    
T  2294813 gtgcctttggaggaaggtaaatgtaattac------aagtgttcgttgagcccgaaagtcttcactgccttagactggggcaccatcccctcaccctaaa 2294720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 28947762 - 28947898
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | ||||||||||||||||| |||| ||||||||||||||  ||  || | |||| ||||| |||||| ||||||| ||||||| || |||    
T  28947762 gaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttcaaaatagaagtgttttgtatgaaaaatattgtttgaatgttt 28947861  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||| | |||||||||| | |||||| | |||||||    
T  28947862 tgtgtcagaattgcttttagatgtgtagaagaccaaa 28947898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 22423408 - 22423471
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctg 190  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |  |||||||||||||||    
T  22423408 cctttggagggaggtaaatgtaaatacttttgtaagtgttctttgtgttcgaaggtcttccctg 22423471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 33843869 - 33843802
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    |||||||||||| |||||||||||| | ||||||||||||| |||||| |||||||||||||| ||||    
T  33843869 aattgattttgattgaattgattctggctaaaagtgagttggatgtaaagtgatttatgtttggatat 33843802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 40286297 - 40286226
Alignment:
Q  360 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||||  | |||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  40286297 aagtgatttacatgaaaaatgttgtttggctattttgtgtcaaaattgattttggttgtgtaaatgaccaaa 40286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 23084530 - 23084461
Alignment:
Q  162 gtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    |||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||| ||||||    
T  23084530 gtgctctttgagtccgaaggtcttccctaccttgaactggggtaccatctcctcaccctaaaaattttgt 23084461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 50399739 - 50399646
Alignment:
Q  130 ttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||  || |||||| ||  ||||||   ||||| ||||| |||||||||||    
T  50399739 ttggaggaaggtaaatgtaaatacctttgtaagtgttctttgagcctaaatgtcttctctaccttggataagggcatcatccgctcaccctaaa 50399646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 42944895 - 42944958
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| |  ||||||||||||    
T  42944895 agaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 42944958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 33574267 - 33574198
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    |||||||| |||||| ||||| ||| | |||||||||||||||||||| |  ||||||||||||||||||    
T  33574267 agaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttgaatat 33574198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 16566394 - 16566330
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  16566394 agaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 16566330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 37990663 - 37990599
Alignment:
Q  159 taagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||| ||||||||||| |||| ||||||||  |||||||||||||||||| |||||| ||||||    
T  37990663 taagtactctttgagcctgaagatcttccctaccttggactggggcaccattccctcatcctaaa 37990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 54488694 - 54488626
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||||||||   ||||||||| | |||||||||||||||||||| |  |||||||||||||||||    
T  54488694 agaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttgaata 54488626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 32238056 - 32238103
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||    
T  32238056 agaattgagtttgagtgaattgattttggttaaaagtgagttgaatgt 32238103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 40012548 - 40012646
Alignment:
Q  130 ttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattttt 229  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||| |  ||||||||||||   ||||||| || |||| ||| ||||| ||||| |||||    
T  40012548 ttggagggaggtaaatgtaaatccctttgtgagtgctc-ttgagtcataaggtcttccctacgttggactaggacaccgtcctctcacactaaatttttt 40012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 51066240 - 51066283
Alignment:
Q  181 gtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  51066240 gtcttccctgccttgaactggggcaccatcccctcaccctaaaa 51066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 53532049 - 53532002
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  53532049 aattgattttagttaaaagtgagttggatgtaacgtggtttatgtttg 53532002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 55638752 - 55638815
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||| |||||| ||||||||| | |||||||||||||| |||||||  ||||||||||||    
T  55638752 agaattgagtttgagagaattgatttttgttaaaagtgagttaaatgtaaattgatttatgttt 55638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 48045679 - 48045741
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||| |||||||||| | ||||| |||||||||  ||| ||||||||||||||    
T  48045679 aattgattttgagtaaattgattctggctaaaactgagttgaagataaagtgatttatgtttg 48045741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 54153131 - 54153066
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| |||||||||||||||| | |||||||||||||||||||| |  ||| |||||||||||||    
T  54153131 aattgagtttgagtgaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttgaata 54153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 27045611 - 27045554
Alignment:
Q  287 attttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||| |||||||||| ||||||||||| |||||||||||  || |||||||||||    
T  27045611 attttgaatgaattgattttagttaaaagtaagttgaatgtagagttatttatgtttg 27045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 28202643 - 28202598
Alignment:
Q  174 cccgaaggtcttccctgtcttggactggggcaccatcccctcaccc 219  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||    
T  28202643 cccgaaggtctttcctgtcttagactggagcaccatcccctcaccc 28202598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 37500205 - 37500250
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||    
T  37500205 aattgattttgaatgaattgattttagttaaaattgagttgaatgt 37500250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 46830066 - 46830130
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||| |||||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  46830066 agaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 46830130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 48550424 - 48550488
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||  ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  48550424 agaattgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 48550488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 51923029 - 51922965
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||| | |  |||||||||||||    
T  51923029 agaattgagtttgagagaattgattttggttaaaagtgagttgaatctgaattgatttatgtttg 51922965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 2206303 - 2206260
Alignment:
Q  285 tgattttgagtgaattgattctagttaaaagtgagttgaatgta 328  Q
    ||||||||| |||||||||| || ||||||||||||||||||||    
T  2206303 tgattttgaatgaattgattttatttaaaagtgagttgaatgta 2206260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 26651845 - 26651908
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||| | |||||| ||||||||| | |||||||||||||||||||| |  ||||||||||||    
T  26651845 agaattaagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 26651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 4954050 - 4954112
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||| ||||||||| | ||||||||||||||  |||| |  |||||||||||||    
T  4954050 aattgattttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttatgtttg 4954112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 13167612 - 13167550
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||| |||||| ||||||||| | |||||||||||||||||||| |  |||||||| ||||    
T  13167612 aattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatatttg 13167550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 26617281 - 26617315
Alignment:
Q  295 tgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||||| ||||||||||||||||||||||||    
T  26617281 tgaattgattttagttaaaagtgagttgaatgtaa 26617315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 32634137 - 32634099
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaat 347  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  32634137 ttaaaagtgacttgaatgtaatgtgatttatgtttgaat 32634099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 39438948 - 39438886
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||| |||||| ||| || ||||||||||||||||||| | ||  ||||||||||    
T  39438948 aattgattttgaatgaattaattttacttaaaagtgagttgaatgtgaagttgtttatgtttg 39438886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 41751199 - 41751265
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||||||||||||||| ||| |  ||||||||||||| ||  ||| |||||| |||||||||||    
T  41751199 aattgattttgagtgaatttattttgtttaaaagtgagttcaagataaagtgattaatgtttgaata 41751265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 41866241 - 41866179
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||| |||||| ||||||| | ||||||||||||||||| |||| |  |||||||||||||    
T  41866241 aattgagtttgagggaattgagtttagttaaaagtgagttggatgtgaattgatttatgtttg 41866179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 50357973 - 50358035
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||| | ||| |||||| ||||||||||||||||||||| || ||| | ||||||||    
T  50357973 aattgattttaaatgagttgattttagttaaaagtgagttgaatgcaaagtggtctatgtttg 50358035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 52062977 - 52063039
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||| |||| |||||||||| |||||||||||||||| || ||||  |||||| ||||||    
T  52062977 aattgatcttgattgaattgattttagttaaaagtgagtttaaggtaaaatgatttctgtttg 52063039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 17898085 - 17898122
Alignment:
Q  312 aaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  17898085 aaagtgagttgaatgtaaagtgatttatgtttggatat 17898122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 28202701 - 28202782
Alignment:
Q  140 gtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcacccta 221  Q
    |||||||||||| | |||||||||| ||| |||||| |||| |||||| || |||  | ||  |||||||||||||||||||    
T  28202701 gtaaatgtaaatgcatttgtaagtgttctatgagcctgaagatcttccttgcctttaattgatgcaccatcccctcacccta 28202782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 46507979 - 46508028
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaa 346  Q
    |||||||||||  ||||||||||| |||| ||| ||||||||||||||||    
T  46507979 aattgattctaaataaaagtgagtggaatataaagtgatttatgtttgaa 46508028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 19599493 - 19599556
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |   ||||||||||||||||||||  |||||||||||||    
T  19599493 agaattgagtttgagagaattgattttgaataaaagtgagttgaatgtaa-ttgatttatgtttg 19599556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 28658103 - 28658051
Alignment:
Q  360 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 412  Q
    |||||||||||| ||||||| ||||||||||||||| ||| | ||||| ||||    
T  28658103 aagtgatttgtatgaaaaatattgtttggatattttttgtaagaattgttttt 28658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 28752604 - 28752560
Alignment:
Q  279 gagaattgattttgagtgaattgattctagttaaaagtgagttga 323  Q
    ||||||||||||||  |||||||||| | ||||||||||||||||    
T  28752604 gagaattgattttgtctgaattgattttggttaaaagtgagttga 28752560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 29149304 - 29149368
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  | ||||||||||||||||| |  |||||||||||||    
T  29149304 agaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttg 29149368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 38306100 - 38306036
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||   ||||||||| | |||||||||||||||||||  |  |||||||||||||    
T  38306100 agaattgattttgttagaattgatttttgttaaaagtgagttgaatgcgaattgatttatgtttg 38306036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 39187823 - 39187759
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||| | |||||||| |  |||||||||||||    
T  39187823 agaattgagtttgagagaattgattttggttaaaagtaatttgaatgtgaattgatttatgtttg 39187759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 39636874 - 39636810
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| |  |||||||||||||| |||| |  |||||||||||||    
T  39636874 agaattgagtttgagagaattgattttgattaaaagtgagttggatgtgaattgatttatgtttg 39636810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 39673042 - 39672982
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtt 342  Q
    |||||||||||| |||| ||||| ||||||||| | |||||||| ||  ||||||||||||    
T  39673042 aattgattttgattgaactgattttagttaaaacttagttgaatatagagtgatttatgtt 39672982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 43772120 - 43772184
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||| |||| |   ||||||||||||    
T  43772120 agaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatcgatttatgtttg 43772184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 45471135 - 45471083
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    ||||||||||| |||||||||| || ||||||| ||||||||| ||| |||||    
T  45471135 aattgattctaattaaaagtgacttaaatgtaaagtgatttatatttaaatat 45471083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 48550306 - 48550242
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||| || ||||||||| |  |||||||||||||  ||||||  |||||||||||||    
T  48550306 agaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 48550242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 49519819 - 49519755
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||| |||| |  | |||||||||||    
T  49519819 agaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatttatttatgtttg 49519755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 54487197 - 54487281
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||||  |||| | |||||| |||||  |||||||||    | |||||||||||||||||||  |||||||||||||    
T  54487197 tgtttggttatgcgatgataaaaattgagtttgatagaattgatttcgatcaaaagtgagttgaatgtaaattgatttatgtttg 54487281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 45324021 - 45324141
Alignment:
Q  110 ttccagccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccat 209  Q
    |||||||||| |  |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  45324021 ttccagccccgctagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctccttgagcccgaaggtcttccctgctttggactggggcaccat 45324120  T
Q  210 cccctcaccctaaaatttttg 230  Q
    |||||||||||||||||||||    
T  45324121 cccctcaccctaaaatttttg 45324141  T

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Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 14498183 - 14498075
Alignment:
Q  123 ggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaa 222  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||    
T  14498183 ggtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagaccaaaggtcttccctgccttggactggggcgccatcccctcaccctaa 14498084  T
Q  223 aatttttgt 231  Q
    |||||||||    
T  14498083 aatttttgt 14498075  T

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Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 30054545 - 30054445
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30054545 gtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 30054446  T
Q  224 a 224  Q
    |    
T  30054445 a 30054445  T

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Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 30370173 - 30370061
Alignment:
Q  114 agccccaccggtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccc 213  Q
    ||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30370173 agccccactagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccc 30370074  T
Q  214 tcaccctaaaatt 226  Q
    ||||| |||||||    
T  30370073 tcaccttaaaatt 30370061  T

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Target: chr1; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 4573412 - 4573515
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  4573412 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgttttggactgaggcactatcccctcaccctaaaattt 4573511  T
Q  228 ttgt 231  Q
    ||||    
T  4573512 ttgt 4573515  T

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Target: chr1; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 22024132 - 22024235
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  22024132 gtgcctttggatggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttctctgccttggactggggcaccatcccctcaccctaaa 22024231  T
Q  224 attt 227  Q
    ||||    
T  22024232 attt 22024235  T

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Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 12025210 - 12025317
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12025210 gtgcctttggaggaaggtaaatgtaattacctttgtaagtactatttgagcccgaaggtcttccctgccttggactggggcaccaccccctcaccctaaa 12025309  T
Q  224 atttttgt 231  Q
    ||||||||    
T  12025310 atttttgt 12025317  T

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Target: chr1; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 20014490 - 20014594
Alignment:
Q  127 cctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  20014490 cctttggagggaggtaaatgtaattacatttgtaaatgctctttgagcctgaaggtcttccctgccttggactgaggcaccatcccctcaccctaaaatt 20014589  T
Q  227 tttgt 231  Q
    |||||    
T  20014590 tttgt 20014594  T

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Target: chr1; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 21090144 - 21090244
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  21090144 gtgccgttggagggaggtaaatgtaaatacatttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaa 21090243  T
Q  224 a 224  Q
    |    
T  21090244 a 21090244  T

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Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 30850939 - 30850841
Alignment:
Q  128 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatt 226  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30850939 ctttggagggaggtaaatataattgcctttgtaagtgctctttgaacccgaaggtctttcctgtcttggactggggcaccatcccctcaccctaaaatt 30850841  T

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Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 33762643 - 33762536
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||| |||||||| |||||||| |||||||||||||| | |||||||||||| || ||||||| |||||||||||||| |||||||||||||||||    
T  33762643 gtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttggactggggcatcatcccctcaccctaaa 33762544  T
Q  224 atttttgt 231  Q
    ||||||||    
T  33762543 atttttgt 33762536  T

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Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 35371833 - 35371754
Alignment:
Q  139 ggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcacc 218  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  35371833 ggtaaatgtaattacctttgtaagtgctctttgagcccgaagttcttccctgccttggactggggcaccatcccctcacc 35371754  T

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Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 33763357 - 33763254
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||| |||||||| |||||||| |||||||||||||| | |||||||||||| || ||||||| |||| ||||||||| |||||||||||||||||    
T  33763357 gtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttgaactggggcatcatcccctcaccctaaa 33763258  T
Q  224 attt 227  Q
    ||||    
T  33763257 attt 33763254  T

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Target: chr1; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 296 - 431
Target Start/End: Complemental strand, 4347086 - 4346950
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||| |||  || | || |||||||||||||| ||||||| |||||||||| |||    
T  4347086 gaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaaaattttgtttggatgttt 4346987  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    || || | |||||||||| | |||||||| |||||||    
T  4346986 tgagtgagaattgcttttagatgtgtaaaagaccaaa 4346950  T

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Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 35618034 - 35618111
Alignment:
Q  154 ctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaatttttgt 231  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||| ||||||    
T  35618034 ctttgtaagtgctctttgagcccgaaggtcttccttgctttggactggggtaccatcccctcaccctaaaaattttgt 35618111  T

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Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 7765311 - 7765433
Alignment:
Q  310 taaaagtgagttgaatgtaacgtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgc 408  Q
    ||||||||||||| ||| || ||||||| |||||| ||| |||||| ||| ||||||||  || ||||||||||||||||||||||||||| ||||||||    
T  7765311 taaaagtgagttggatgaaaagtgatttttgtttggatacttttatgatagaagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgc 7765410  T
Q  409 ttttgggtgtgtaaatgaccaaa 431  Q
    |||| | | || |||||||||||    
T  7765411 ttttagttatgaaaatgaccaaa 7765433  T

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Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 44438652 - 44438553
Alignment:
Q  125 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaa 224  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||| |   ||||||||||||||| |||| ||||||| ||||||||||| || |||||    
T  44438652 tgcctttggagggaggtaaatgtaattacttttgtaagtgttctttaaattcgaaggtcttccctgccttgaactggggtaccatcccctcgccttaaaa 44438553  T

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Target: chr1; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 306 - 431
Target Start/End: Original strand, 7335903 - 7336029
Alignment:
Q  306 tagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaa 404  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| | || |||||||||||  |  ||| ||| ||||||||||  |||  | ||||    
T  7335903 tagttaaaagtgagttgaatgtaaagtgatttatgtttgaatgttttaacaacaaaagtgatttacatcaaagatggtgtttggatagcttgaatcaaaa 7336002  T
Q  405 ttgcttttgggtgtgtaaatgaccaaa 431  Q
    |||||||| ||||||||||| ||||||    
T  7336003 ttgcttttaggtgtgtaaattaccaaa 7336029  T

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Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 431
Target Start/End: Complemental strand, 5930872 - 5930736
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | ||||||||| | |||||||||| ||||||||||||||  ||  || | || |||||||||||||| ||||||||||||||| || |||    
T  5930872 gaattgattttggttaaaagtaaattgaatgtaaagtgatttatgtttggttaccttcaaaacaaaagtgatttgtatgaaaaatgttgtttgaatgttt 5930773  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    || || | |||||||||| | |||||||| |||||||    
T  5930772 tgagtgagaattgcttttagatgtgtaaaagaccaaa 5930736  T

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Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 17015192 - 17015252
Alignment:
Q  167 ctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaaattt 227  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  17015192 ctttgagcccgaaggtcttccctgctttggactggggcaccatcccctcatcctaaaattt 17015252  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 36447705 - 36447818
Alignment:
Q  311 aaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctt 410  Q
    ||||||||||| |  |||| |||||||||||| ||||  || ||| || ||||||||| ||  ||| |||||||||||||||||||||| ||||||||||    
T  36447705 aaaagtgagttaagagtaaagtgatttatgttggaatgcttcatagtagaagtgatttatataaaagatgttgtttggatattttgtgtcaaaattgctt 36447804  T
Q  411 ttgggtgtgtaaat 424  Q
    |||| | |||||||    
T  36447805 ttggatatgtaaat 36447818  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 20800275 - 20800339
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  20800275 agaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 20800339  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 35569200 - 35569264
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| |  |||||||||||||    
T  35569200 agaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 35569264  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 40352518 - 40352411
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaa 378  Q
    ||||||||||||| | ||||||||| | |||||||||||||| ||||||| |||||||||||||| ||||  | | || |||||||||||||  ||||||    
T  40352518 agaattgattttgtg-gaattgattttggttaaaagtgagtttaatgtaaagtgatttatgtttggatatcctcacaacaaaagtgatttgtgtgaaaaa 40352420  T
Q  379 tgttgtttg 387  Q
    | |||||||    
T  40352419 tattgtttg 40352411  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 47978359 - 47978419
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatg 340  Q
    |||||| |||||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  47978359 agaattcattttgagtgaattgattttgggtaaaagtgagttgaatgtaaagtgatttatg 47978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 28287260 - 28287304
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatg 326  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  28287260 aattgactttgagtgaattgattctagctaaaagtgagttgaatg 28287304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 47085962 - 47085898
Alignment:
Q  279 gagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgttt 343  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||||| |  ||||||||||||    
T  47085962 gagaattgattttgatagaattgattttaattaaaagtgagttgaatgtgaattgatttatgttt 47085898  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 418
Target Start/End: Original strand, 47981821 - 47981931
Alignment:
Q  308 gttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaatt 406  Q
    ||||||| |||||||||| ||| |||||||||||||| |||  || | || | ||||||||| ||  |||| ||| ||||||||||||||| ||| ||||    
T  47981821 gttaaaattgagttgaatttaaagtgatttatgtttggataccttcaaaacagaagtgatttttataaaaattgt-gtttggatattttgtattagaatt 47981919  T
Q  407 gcttttgggtgt 418  Q
    ||||||||||||    
T  47981920 gcttttgggtgt 47981931  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 32365190 - 32365120
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||||| |||| |||||||||||||||||||  ||||||||||||||| || ||  ||||||| |||||    
T  32365190 aattgattttagtcaaaagtgagttgaatgtaaattgatttatgtttgaacatatttaaataaaattgatt 32365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 49178301 - 49178215
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgattt 368  Q
    |||||||||||| |||||||||| | ||||||| ||| | |||| |||  |||||||||||||||||| ||   |||||||||||||    
T  49178301 aattgattttgattgaattgatttttgttaaaaatgactcgaatataaattgatttatgtttgaatatcttgacataaaagtgattt 49178215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 25061352 - 25061267
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||||||||  |||||||||| | |||||||||||||||||  |||  ||||||||||||| |||  |||  ||||||||||||    
T  25061352 aattgattttggttgaattgattttggttaaaagtgagttgaacataaattgatttatgtttggataccttaacataaaagtgatt 25061267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 1199955 - 1199891
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||| ||| | |||||||||||||||||||| |  |||||||||||||    
T  1199955 agaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttg 1199891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 3516001 - 3515957
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||    
T  3516001 tgtttggttatgcggtgattagaattggttttgagtgaattgatt 3515957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 5268362 - 5268310
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatat 349  Q
    ||||||||||   |||||||||||||||||||| ||||||| |||||||||||    
T  5268362 aattgattctgcctaaaagtgagttgaatgtaaagtgatttttgtttgaatat 5268310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 13344885 - 13344837
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  13344885 gaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 13344837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 31223502 - 31223438
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| |||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  31223502 agaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 31223438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 42850217 - 42850281
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| ||| |||||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  42850217 agaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 42850281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 25230134 - 25230087
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||| ||| |||||| ||||||||| ||||||||||||||||||||||    
T  25230134 agaactgagtttgagagaattgattttagttaaaagtgagttgaatgt 25230087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 29759762 - 29759715
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||| | ||||||||||||||||||||||  |||||||||||||    
T  29759762 aattgattatggttaaaagtgagttgaatgtaaaatgatttatgtttg 29759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 48511035 - 48510972
Alignment:
Q  281 gaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||| ||||||  |||||||| | |||||||||||||||||||| |  |||||||||||||    
T  48511035 gaattgagtttgagataattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 48510972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 4369803 - 4369864
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||| ||||||||| | ||||||||||||||| |||| |  |||||||||||||    
T  4369803 aattgattttgagagaattgattttggttaaaagtgagttg-atgtgaattgatttatgtttg 4369864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 5410765 - 5410699
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| |||||  ||||||||| |  |||||||||||||| ||||||  |||||||||||||||||    
T  5410765 aattgaatttgaaagaattgattttgattaaaagtgagttggatgtaaattgatttatgtttgaata 5410699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 49242982 - 49243048
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||| |||||| ||||||||| | ||||||| ||||||| |||| |  |||||||||||||||||    
T  49242982 aattgagtttgagagaattgattttggttaaaaatgagttggatgtgaattgatttatgtttgaata 49243048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 6932113 - 6932158
Alignment:
Q  284 ttgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||    
T  6932113 ttgattttgaatgaattgattctgactaaaagtgagttgaatgtaa 6932158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 10470717 - 10470668
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||| |||||| ||||||||| |  |||||||||||||||||||||    
T  10470717 agaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaa 10470668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 11561948 - 11561863
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatt 367  Q
    |||||| |||||  ||||| ||| | |||||||||||||||||||| |  |||||||| |||||||||  |||  |||||||||||    
T  11561948 aattgagtttgaaagaattaattttggttaaaagtgagttgaatgtgaattgatttatatttgaatatactattttaaaagtgatt 11561863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 12247547 - 12247498
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    |||||||| ||| || ||||||||||| ||||||||||||||| ||||||    
T  12247547 agaattgagtttaagagaattgattctggttaaaagtgagttggatgtaa 12247498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 28464939 - 28464984
Alignment:
Q  299 ttgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||    
T  28464939 ttgattctatctaaaagcgagttgaatgtaacatgatttatgtttg 28464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 29438635 - 29438562
Alignment:
Q  358 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||| ||||||||| | ||||| ||||||||||||| ||||| ||| ||||||||  || || |||||||||||    
T  29438635 aaaaatgatttgtatgtaaaatattgtttggatattgtgtgtcaaacttgcttttaagtatgcaaatgaccaaa 29438562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 34571088 - 34571157
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaa 329  Q
    ||||||||||||| ||||  | |||||||||| |   ||||||||||  |||||||||||||||||||||    
T  34571088 tgtttggttatgcggtgacaaaaattgattttcataaaattgattctgattaaaagtgagttgaatgtaa 34571157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 50751233 - 50751294
Alignment:
Q  287 attttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||| |||||||||||    |||||||||||| |||||||  |||||||||||||||||    
T  50751233 attttgaatgaattgattcggactaaaagtgagttaaatgtaaaatgatttatgtttgaata 50751294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 3134656 - 3134716
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtt 342  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||   || ||||||||||||    
T  3134656 aattgattttgagtgaattaattatggttaaaagtgagtttaaaacaaagtgatttatgtt 3134716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 5167425 - 5167381
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||||||| ||| ||||||| |||||||||||| ||||||||||    
T  5167425 tgtttggttctgcggtgatgaaaattgattttgaatgaattgatt 5167381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 6752789 - 6752845
Alignment:
Q  286 gattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtt 342  Q
    |||||||| |||||||||||| ||||||||| ||| |||||||  || |||||||||    
T  6752789 gattttgaatgaattgattctggttaaaagtaagtcgaatgtatagtaatttatgtt 6752845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 7765247 - 7765291
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||||||||||| |||| |||||||||||||||  |||||||||    
T  7765247 tgtttggttatgcggtgacgagaattgattttgatagaattgatt 7765291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 7826352 - 7826416
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    ||||||||||||||| ||||||||| | |||||||||||| |  |||| |  |||||||||||||    
T  7826352 agaattgattttgagagaattgattttggttaaaagtgagcttgatgtgaattgatttatgtttg 7826416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 13056109 - 13056057
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    ||||||||| | |||||||||||||||| ||| |  |||||||||||||||||    
T  13056109 gaattgattttggttaaaagtgagttgagtgtgaattgatttatgtttgaata 13056057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 15477340 - 15477384
Alignment:
Q  260 tgtttggttatgcagtgatgagaattgattttgagtgaattgatt 304  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||||||    
T  15477340 tgttttgttatgcggtgatgaaaattgattttgagtaaattgatt 15477384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 27801650 - 27801714
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttg 344  Q
    |||||||||||| || ||||||||| |  |||||||||||||  ||||||  |||||||||||||    
T  27801650 agaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 27801714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 45710176 - 45710109
Alignment:
Q  280 agaattgattttgagtgaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaata 348  Q
    |||||||| |||||||||||||||| |  |||||||||||||| |||| |  ||| |||||||||||||    
T  45710176 agaattgagtttgagtgaattgattttgattaaaagtgagttgtatgtgaattga-ttatgtttgaata 45710109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 107794 - 107691
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggggcaccatcccctcaccctaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  107794 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctaccctgccttggactggggcaccatcccctca-cctaaa 107696  T
Q  224 atttt 228  Q
    |||||    
T  107695 atttt 107691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 65587 - 65452
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatatttt 395  Q
    |||||||| | ||||||| |||||| ||||||| |||||||||||||| ||||  | | || |||||||||||||| ||||||| ||||||||||| |||    
T  65587 aattgattttggttaaaaatgagtttaatgtaaagtgatttatgtttggatatcctcacaacaaaagtgatttgtatgaaaaatattgtttggatacttt 65488  T
Q  396 gtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    |||| ||||||| |||||||||||||||||||||||    
T  65487 gtgtcaaaattgattttgggtgtgtaaatgaccaaa 65452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 199382 - 199518
Alignment:
Q  296 gaattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatatttt-ataataaaagtgatttgtaggaaaaatgttgtttggatattt 394  Q
    ||||||||| | ||||||||||||||||| |||| ||||||||||||||  ||  || | |||| ||||| |||||| |||||||||||||||||| |||    
T  199382 gaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttcaaaatataagtgctttgtatgaaaaatgttgtttggatgttt 199481  T
Q  395 tgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||| | |||||||||| |  ||||||| |||||||    
T  199482 tgtgtcagaattgcttttagaagtgtaaaagaccaaa 199518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 219728 - 219605
Alignment:
Q  309 ttaaaagtgagttgaatgtaacgtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 407  Q
    |||||||||||||||||| || |||||||||||||| |||| ||||  ||| ||||||||  || || | |||||||||||||||||||||| |||||||    
T  219728 ttaaaagtgagttgaatgaaaagtgatttatgtttggatatctttaagatagaagtgattcttatgagagatgttgtttggatattttgtgtcaaaattg 219629  T
Q  408 cttttgggtgtgtaaatgaccaaa 431  Q
    ||||| | | || |||||||||||    
T  219628 cttttagttatgaaaatgaccaaa 219605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 15271 - 15394
Alignment:
Q  297 aattgattctagttaaaagtgagttgaatgtaacgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttg 396  Q
    |||||||| | |||||||||||||||||| ||| |||||||||||||| ||| || | || | ||||||||| || ||||| || |||||| ||||||||    
T  15271 aattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatacttcaaaacataagtgatttttatgaaaactggtgtttgaatattttg 15370  T
Q  397 tgttaaaattgcttttgggtgtgt 420  Q
      ||| |||||||||||| |||||    
T  15371 cattagaattgcttttggatgtgt 15394  T

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Target: scaffold0691 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 7072 - 6994
Alignment:
Q  124 gtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactggg 202  Q
    |||| |||||||||| |||||||||| |||||||| ||||| |||||||| |||||||||||||||  |||||||||||    
T  7072 gtgcgtttggagggaagtaaatgtaattacctttgcaagtgttctttgagtccgaaggtcttccctaccttggactggg 6994  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 5829 - 5874
Alignment:
Q  282 aattgattttgagtgaattgattctagttaaaagtgagttgaatgt 327  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||    
T  5829 aattgagtttgagagaattgattttggttaaaagtgagttgaatgt 5874  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 431
Target Start/End: Complemental strand, 7010 - 6914
Alignment:
Q  334 atttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 431  Q
    ||||||||||| ||| || | || ||||||||||||||  ||| |||||||||  ||| ||| ||| ||||||| |||||  ||||||||||||||||    
T  7010 atttatgtttggatacttcaaaacaaaagtgatttgtataaaatatgttgtttaaata-tttatgtcaaaattgattttgaatgtgtaaatgaccaaa 6914  T

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