View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9453_low_25 (Length: 294)
Name: NF9453_low_25
Description: NF9453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9453_low_25 |
 |  |
|
| [»] scaffold0083 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 29836367 - 29836091
Alignment:
| Q |
1 |
gagatgaaaggaagttcagcacctgatttgtgaccttggattgtatggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29836367 |
gagatgaaaggaagttcagcacctgatttgtgaccttggattgtatggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
29836268 |
T |
 |
| Q |
101 |
taaatcattaagccattctcggacagccggatcatggatctgcttcatctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29836267 |
taaatcattaagccattctcggacagccggatcatggatctgcttcctctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgc |
29836168 |
T |
 |
| Q |
201 |
ttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaactctgttgaggttagtttgtccatcatggt |
277 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29836167 |
ttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaactctgttgaggttagtttgtccatcatggt |
29836091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 11149282 - 11149492
Alignment:
| Q |
54 |
taactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttcatctctg |
153 |
Q |
| |
|
||||||||||| |||||||||||||| | |||| |||| |||||||| || |||| |||||||| | |||||| |||| | |||||||||| || | |
|
|
| T |
11149282 |
taactaatttgattcagcaaatcctcggcatcaaagatagcatctttcaagtcatcaagccattgtttgacagcaggattgttgatctgcttctcatcag |
11149381 |
T |
 |
| Q |
154 |
catcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaactctgt |
253 |
Q |
| |
|
||||| | ||||| |||| |||| || ||||||||||| |||||||||||||| ||| ||||||||| ||||||||| | |||| ||||||| || |
|
|
| T |
11149382 |
catcatccagcacagcttgaagaaccagcagtgttgtttgtaactgcttcaagagtgagacattcagctttttgttgttgatgaaatcacgaaactcagt |
11149481 |
T |
 |
| Q |
254 |
tgaggttagtt |
264 |
Q |
| |
|
||| ||||||| |
|
|
| T |
11149482 |
tgaagttagtt |
11149492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 11131454 - 11131677
Alignment:
| Q |
54 |
taactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttcatctctg |
153 |
Q |
| |
|
||||||||||| |||||||||||||| | |||| |||| |||||||| || |||| || ||||| | |||||| | | | |||||||||| ||| | |
|
|
| T |
11131454 |
taactaatttgattcagcaaatcctccgcatcaaagatagcatctttcaagtcatcaacccattttttgacagcacggttgttgatctgcttctcctcag |
11131553 |
T |
 |
| Q |
154 |
catcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaactctgt |
253 |
Q |
| |
|
||||| | ||||| |||| |||| || ||||||||||| |||||||||||||| ||| ||||||||| ||||||||| | |||| ||||||| || |
|
|
| T |
11131554 |
catcatccagcacagcttgaagaaccagcagtgttgtttgtaactgcttcaagagtgagacattcagctttttgttgttgatgaaatcacgaaactcagt |
11131653 |
T |
 |
| Q |
254 |
tgaggttagtttgtccatcatggt |
277 |
Q |
| |
|
||| ||||||||||| | |||||| |
|
|
| T |
11131654 |
tgaagttagtttgtcaagcatggt |
11131677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 256
Target Start/End: Original strand, 10434451 - 10434674
Alignment:
| Q |
33 |
accttggattgtatggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggat |
132 |
Q |
| |
|
||||||||| | | |||||| ||||| |||| ||| ||||| ||||| | |||| ||| |||||||| || |||| |||||||| | |||||| || | |
|
|
| T |
10434451 |
accttggatcgaagggaatcataactgatttcgttgagcaagtcctcggcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcaggtt |
10434550 |
T |
 |
| Q |
133 |
catggatctgcttcatctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgtt |
232 |
Q |
| |
|
| |||||||||| |||||||||| | ||||| ||| |||||||||||||||||||| || |||| ||||||| |||| ||| ||||| |||| || |
|
|
| T |
10434551 |
tgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagaagtgttgttttcagctgcctcaagagtgagtcattgagcttggtgttttt |
10434650 |
T |
 |
| Q |
233 |
gacgtaatcttgaaactctgttga |
256 |
Q |
| |
|
|| |||||| |||||||| |||| |
|
|
| T |
10434651 |
gatgtaatcacgaaactcttttga |
10434674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 10888947 - 10888724
Alignment:
| Q |
54 |
taactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttcatctctg |
153 |
Q |
| |
|
|||||||||||||||||||||||||| | |||| ||| |||||||| || |||| |||||||| | |||||| | | | |||||||||| ||| | |
|
|
| T |
10888947 |
taactaatttggttcagcaaatcctccgcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcacggttgttgatctgcttctcctcag |
10888848 |
T |
 |
| Q |
154 |
catcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaactctgt |
253 |
Q |
| |
|
||||| | ||||| |||| |||| || || |||||||| |||||||||||||| ||| ||||||||| ||||||||| | |||| ||||||| || |
|
|
| T |
10888847 |
catcatccagcacagcttgaagaaccagcagcgttgtttgtaactgcttcaagagtgagacattcagctttttgttgttgatgaaatcacgaaactcagt |
10888748 |
T |
 |
| Q |
254 |
tgaggttagtttgtccatcatggt |
277 |
Q |
| |
|
||| ||||||| ||| | |||||| |
|
|
| T |
10888747 |
tgaagttagttggtcaagcatggt |
10888724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 277
Target Start/End: Complemental strand, 8860933 - 8860704
Alignment:
| Q |
48 |
gaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttca |
147 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| | |||| ||| |||||||| || |||| |||||||| | |||||| ||| | |||||||||| |
|
|
| T |
8860933 |
gaatcataactgatttggttgagcaaatcctcagcatcaaagagagcatctttcaagtcatcaagccattgtttgacagcacgattgttgatctgcttct |
8860834 |
T |
 |
| Q |
148 |
tctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaa |
247 |
Q |
| |
|
|||||||||| | ||||| |||| |||| || || |||| ||| |||||||||||||| ||| |||||||| ||||||||| | |||| |||| |
|
|
| T |
8860833 |
cctctgcatcatccagcacagcttgaagaaccagcagcgttgcttgtaactgcttcaagagtgagacgttcagctttctgttgttgatgaaatcacgaaa |
8860734 |
T |
 |
| Q |
248 |
ctctgttgaggttagtttgtccatcatggt |
277 |
Q |
| |
|
||| ||||| ||||||| ||| | |||||| |
|
|
| T |
8860733 |
ctcggttgaagttagttggtcaagcatggt |
8860704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 256
Target Start/End: Original strand, 10364219 - 10364428
Alignment:
| Q |
47 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
146 |
Q |
| |
|
|||||| ||||| |||| || ||||||||||| | |||| ||| |||||||| || ||| |||||||| | |||||| |||| | |||||||||| |
|
|
| T |
10364219 |
ggaatcataactgatttcgtgaagcaaatcctcggcatcaaagacagcatctttcaagccatcaagccattgtttgacagcaggattgttgatctgcttc |
10364318 |
T |
 |
| Q |
147 |
atctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaa |
246 |
Q |
| |
|
||||| ||| | ||||| ||| ||||||||| ||||||||||| |||||| ||||||| |||| ||| || || |||| |||| |||||| ||| |
|
|
| T |
10364319 |
tcttctgcgtcatccagcacaacttgaagagtgagcagtgttgtttgtaactgcctcaagagtgagtcattgagtttggtgtttttgatgtaatcaagaa |
10364418 |
T |
 |
| Q |
247 |
actctgttga |
256 |
Q |
| |
|
|||||||||| |
|
|
| T |
10364419 |
actctgttga |
10364428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 256
Target Start/End: Complemental strand, 10580249 - 10580040
Alignment:
| Q |
47 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
146 |
Q |
| |
|
|||||||||||| |||| || ||||| ||||| | |||| ||| |||||||| || |||| ||||||| | |||||| |||| || |||||||||| |
|
|
| T |
10580249 |
ggaatcgtaactgatttcattgagcaagtcctcagcatcaatgatagcatctttcaagtcatcaagccatagtttgacagcaggattattgatctgcttc |
10580150 |
T |
 |
| Q |
147 |
atctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaa |
246 |
Q |
| |
|
|||||||||| | ||||| ||| ||||||||| |||||||||| | |||| ||||||| ||| ||| ||||| |||| |||| |||||| ||| |
|
|
| T |
10580149 |
tcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttaagctgcctcaagagtgagacattgagcttagtgtttttgatgtaatcaagaa |
10580050 |
T |
 |
| Q |
247 |
actctgttga |
256 |
Q |
| |
|
|||| ||||| |
|
|
| T |
10580049 |
actcagttga |
10580040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 10195231 - 10195112
Alignment:
| Q |
137 |
gatctgcttcatctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacg |
236 |
Q |
| |
|
|||||||||| ||| |||||| | ||||| ||| ||||||||| |||||||||| || |||| ||||||| ||| ||||| ||| |||| |||| | |
|
|
| T |
10195231 |
gatctgcttctcctccgcatcatccagcacaacttgaagagtgagcagtgttgttttcagctgcctcaagagtgagacattcaacttggtgtttttgatg |
10195132 |
T |
 |
| Q |
237 |
taatcttgaaactctgttga |
256 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
10195131 |
taatcacgaaactctgttga |
10195112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 10376356 - 10376475
Alignment:
| Q |
137 |
gatctgcttcatctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacg |
236 |
Q |
| |
|
|||||||||| |||||||||| | ||||| ||| ||||||||| |||||||||| |||||| ||||||| ||| ||| || || |||| |||| | |
|
|
| T |
10376356 |
gatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgtttttaactgcctcaagagtgagacattgagtttggtgtttttgatg |
10376455 |
T |
 |
| Q |
237 |
taatcttgaaactctgttga |
256 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
10376456 |
taatcaagaaactctgttga |
10376475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 256
Target Start/End: Complemental strand, 10088438 - 10088229
Alignment:
| Q |
47 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
146 |
Q |
| |
|
|||||| ||||| |||| | | ||||| ||||| | |||| ||| |||||||| || |||| ||||||| | |||||| |||| | |||||||||| |
|
|
| T |
10088438 |
ggaatcataactgatttcgctgagcaagtcctcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttc |
10088339 |
T |
 |
| Q |
147 |
atctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaa |
246 |
Q |
| |
|
||| |||||| | ||||| ||| ||||||||| |||||||||| || |||| || |||| ||| ||||| ||| |||| |||| |||||| ||| |
|
|
| T |
10088338 |
tcctccgcatcatccagcacaacttgaagagtgagcagtgttgttttcagctgcctcgagagtgagacattcaacttggtgtttttgatgtaatcacgaa |
10088239 |
T |
 |
| Q |
247 |
actctgttga |
256 |
Q |
| |
|
|||||||||| |
|
|
| T |
10088238 |
actctgttga |
10088229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13160624 - 13160575
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
13160624 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
13160575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13170675 - 13170626
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
13170675 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
13170626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13289309 - 13289260
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
13289309 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
13289260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13332548 - 13332499
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
13332548 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
13332499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 10031643 - 10031583
Alignment:
| Q |
43 |
gtatggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaa |
103 |
Q |
| |
|
|||||| || ||| || ||||| || ||||||||||| | ||||||||||||||||||||| |
|
|
| T |
10031643 |
gtatggcattgtagctgatttgattgagcaaatcctcagcatcatagattgcatcttttaa |
10031583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 13343724 - 13343684
Alignment:
| Q |
60 |
atttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
13343724 |
atttggttaagcaaatcctcagcatcatagattgcatcttt |
13343684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 31680162 - 31680384
Alignment:
| Q |
49 |
aatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttcat |
148 |
Q |
| |
|
|||| ||||| || ||||| ||||||||||| | |||||| ||||||||||| || |||| |||||||| | ||||| ||| | |||||||||| | |
|
|
| T |
31680162 |
aatcataactgatctggttgagcaaatcctcagcatcatatattgcatctttcaactcatcaagccattgtttgacaggaagattgttgatctgcttctt |
31680261 |
T |
 |
| Q |
149 |
ctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaaac |
248 |
Q |
| |
|
||| |||||| | || || || | |||||||||||||||||| | || |||||||| || || ||||||||| ||||||||| | ||| | ||||| |
|
|
| T |
31680262 |
ctcagcatcatcaagaacagcatgaagagtgagaagtgttgtctctaaatgcttcaaaagtgataagttcagcttcttgttgttgatgaaatttcgaaac |
31680361 |
T |
 |
| Q |
249 |
tctgttgaggttagtttgtccat |
271 |
Q |
| |
|
|||| ||| ||||| ||||||| |
|
|
| T |
31680362 |
tctggtgatgttagcctgtccat |
31680384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 256
Target Start/End: Original strand, 50226 - 50435
Alignment:
| Q |
47 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
146 |
Q |
| |
|
|||||| ||||| |||| | | ||||| ||||| | |||| ||| |||||||| || |||| ||||||| | |||||| |||| | |||||||||| |
|
|
| T |
50226 |
ggaatcataactgatttcgctgagcaagtcctcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttc |
50325 |
T |
 |
| Q |
147 |
atctctgcatcaactagcaccgcttcaagagtgagaagtgttgtttgcaactgcttcaagagagagtgattcagcttcatgttgttgacgtaatcttgaa |
246 |
Q |
| |
|
||| |||||| | ||||| ||| |||||||||||||||||||| || |||| ||||||| ||| ||| ||||| |||| |||| |||||| ||| |
|
|
| T |
50326 |
tcctcagcatcatccagcacaacttgaagagtgagaagtgttgttttcagctgcctcaagagtgagacattgagcttagtgtttttgatgtaatcaagaa |
50425 |
T |
 |
| Q |
247 |
actctgttga |
256 |
Q |
| |
|
|||||||||| |
|
|
| T |
50426 |
actctgttga |
50435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 136313 - 136362
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
136313 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
136362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 146364 - 146413
Alignment:
| Q |
51 |
tcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttt |
100 |
Q |
| |
|
|||||| | |||||||| ||||||||||| | |||||||||||||||||| |
|
|
| T |
146364 |
tcgtaattgatttggttaagcaaatcctcagcatcatagattgcatcttt |
146413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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