View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9453_low_47 (Length: 208)
Name: NF9453_low_47
Description: NF9453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9453_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 4488087 - 4488239
Alignment:
| Q |
41 |
ctataaaattaaacgaatattcttatgcataagtttcgaaaatgtcctcaaacaagatgctcttcagcttttttagagggacctctaaaacaatagacac |
140 |
Q |
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| T |
4488087 |
ctataaaattaaacgaatattcttatgcataagtttcaaaaatgtcctcaaacaagatactctccagcttttttagagggacctctaaaacaatagacac |
4488186 |
T |
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| Q |
141 |
aaaaatcttaggttagactatacgtagttaagcaattcttatttatatttcct |
193 |
Q |
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| T |
4488187 |
aaaaatcttaggttagactatacgtagctaagcaatttttacttatatttcct |
4488239 |
T |
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