View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9453_low_48 (Length: 207)
Name: NF9453_low_48
Description: NF9453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9453_low_48 |
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Alignment Details
Target: chr4 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13145063 - 13145211
Alignment:
| Q |
1 |
ctataaaattgtagaattagctttctcgtactttaaaaaatattctattggcttgtgcctcaacttttcttcatgctctacatcttctgttgtttcctcc |
100 |
Q |
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| T |
13145063 |
ctataaaattgtagaattagccttccagtactttaaaaaatattctattggcttgtgcctcaacttttcttcatgttttacatcttctgttgtttcctcc |
13145162 |
T |
|
| Q |
101 |
tcaaaacctctatttaa-tgaaagaaagaaactatcatgcactaataca |
148 |
Q |
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||||||||||| ||||| |||||| ||||||||||||||||||||||| |
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| T |
13145163 |
tcaaaacctctctttaacggaaagacagaaactatcatgcactaataca |
13145211 |
T |
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