View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9456_low_13 (Length: 283)

Name: NF9456_low_13
Description: NF9456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9456_low_13
NF9456_low_13
[»] chr4 (32 HSPs)
chr4 (69-270)||(12570095-12570296)
chr4 (71-208)||(23843613-23843751)
chr4 (71-208)||(44675767-44675905)
chr4 (73-247)||(13569612-13569783)
chr4 (72-201)||(15125001-15125130)
chr4 (71-190)||(15093926-15094046)
chr4 (71-211)||(16356799-16356938)
chr4 (71-211)||(16487924-16488064)
chr4 (71-211)||(16348511-16348650)
chr4 (106-208)||(15353188-15353290)
chr4 (85-208)||(5338841-5338964)
chr4 (71-209)||(15121649-15121786)
chr4 (106-208)||(36133844-36133945)
chr4 (106-209)||(17810394-17810496)
chr4 (106-209)||(25555638-25555741)
chr4 (85-209)||(16351709-16351833)
chr4 (106-209)||(11250442-11250545)
chr4 (106-209)||(14757304-14757406)
chr4 (101-206)||(43256038-43256141)
chr4 (106-209)||(27534148-27534250)
chr4 (150-211)||(10712639-10712700)
chr4 (150-211)||(10926409-10926470)
chr4 (150-211)||(12487494-12487555)
chr4 (154-211)||(14954433-14954490)
chr4 (154-211)||(25689653-25689710)
chr4 (150-211)||(43256339-43256400)
chr4 (172-211)||(13812966-13813005)
chr4 (172-211)||(20157407-20157446)
chr4 (144-209)||(4561254-4561318)
chr4 (144-209)||(5756858-5756922)
chr4 (144-209)||(9556652-9556716)
chr4 (172-209)||(22634369-22634406)
[»] chr8 (35 HSPs)
chr8 (69-270)||(24755795-24755996)
chr8 (85-270)||(377352-377537)
chr8 (69-269)||(16184802-16185003)
chr8 (86-270)||(19259443-19259627)
chr8 (71-270)||(21168567-21168767)
chr8 (71-208)||(19899230-19899368)
chr8 (71-208)||(19983228-19983366)
chr8 (85-211)||(20465899-20466025)
chr8 (71-270)||(21161904-21162094)
chr8 (72-270)||(17353784-17353979)
chr8 (71-211)||(30643137-30643278)
chr8 (71-211)||(17926553-17926692)
chr8 (71-165)||(23776681-23776775)
chr8 (71-211)||(15602863-15603003)
chr8 (71-211)||(16410101-16410240)
chr8 (71-211)||(15611315-15611455)
chr8 (71-153)||(21395828-21395910)
chr8 (71-153)||(21790321-21790403)
chr8 (106-209)||(20856306-20856409)
chr8 (71-142)||(19976647-19976718)
chr8 (71-153)||(21389298-21389380)
chr8 (125-211)||(22010579-22010664)
chr8 (106-211)||(16861208-16861312)
chr8 (150-211)||(21828276-21828337)
chr8 (150-211)||(14398035-14398096)
chr8 (154-211)||(18862911-18862968)
chr8 (150-211)||(21410733-21410794)
chr8 (150-211)||(21805225-21805286)
chr8 (162-208)||(39094861-39094907)
chr8 (144-209)||(19278203-19278267)
chr8 (144-209)||(21972505-21972569)
chr8 (144-209)||(21976590-21976654)
chr8 (144-209)||(22111973-22112037)
chr8 (144-209)||(43251935-43251999)
chr8 (106-138)||(39094823-39094855)
[»] chr6 (46 HSPs)
chr6 (70-270)||(15894274-15894474)
chr6 (71-270)||(21739868-21740067)
chr6 (71-211)||(18907241-18907381)
chr6 (71-209)||(25642029-25642168)
chr6 (71-211)||(19863112-19863253)
chr6 (71-211)||(19873254-19873395)
chr6 (71-257)||(22438892-22439075)
chr6 (71-257)||(22432342-22432525)
chr6 (71-211)||(21834736-21834874)
chr6 (71-209)||(22334737-22334877)
chr6 (106-209)||(17804319-17804421)
chr6 (106-209)||(19790660-19790763)
chr6 (106-209)||(20907863-20907966)
chr6 (106-209)||(22863068-22863170)
chr6 (71-153)||(16523249-16523331)
chr6 (125-211)||(18180623-18180708)
chr6 (106-208)||(23657302-23657403)
chr6 (117-209)||(22429923-22430014)
chr6 (106-209)||(14472392-14472494)
chr6 (106-209)||(25767050-25767152)
chr6 (118-208)||(27567503-27567593)
chr6 (150-211)||(16760078-16760139)
chr6 (101-190)||(27415819-27415907)
chr6 (150-211)||(31478072-31478133)
chr6 (106-209)||(18955645-18955747)
chr6 (125-211)||(22408205-22408290)
chr6 (150-211)||(1644491-1644552)
chr6 (170-211)||(16523330-16523371)
chr6 (154-211)||(22948891-22948948)
chr6 (154-211)||(22952847-22952904)
chr6 (150-211)||(23414763-23414824)
chr6 (154-211)||(23871335-23871392)
chr6 (154-211)||(23875291-23875348)
chr6 (150-211)||(27556521-27556582)
chr6 (150-205)||(27416120-27416175)
chr6 (69-122)||(31164691-31164744)
chr6 (71-155)||(15041396-15041480)
chr6 (127-194)||(22059645-22059712)
chr6 (165-211)||(14472054-14472100)
chr6 (165-211)||(18956040-18956086)
chr6 (144-209)||(1644827-1644891)
chr6 (144-209)||(11566984-11567048)
chr6 (144-209)||(19870712-19870776)
chr6 (144-209)||(23395190-23395254)
chr6 (144-209)||(23990042-23990106)
chr6 (173-209)||(8243983-8244019)
[»] scaffold0042 (1 HSPs)
scaffold0042 (69-269)||(34754-34954)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-270)||(13921-14122)
[»] scaffold0158 (2 HSPs)
scaffold0158 (71-270)||(2913-3112)
scaffold0158 (71-270)||(6579-6778)
[»] chr3 (57 HSPs)
chr3 (71-270)||(15060365-15060564)
chr3 (85-270)||(16909823-16910008)
chr3 (71-270)||(15051589-15051788)
chr3 (69-270)||(23052921-23053123)
chr3 (85-270)||(16369481-16369666)
chr3 (71-270)||(14878351-14878552)
chr3 (71-270)||(17524998-17525194)
chr3 (140-270)||(12172877-12173007)
chr3 (71-270)||(23408509-23408705)
chr3 (76-211)||(322721-322856)
chr3 (71-211)||(18383763-18383903)
chr3 (71-270)||(23077324-23077513)
chr3 (71-211)||(12496388-12496527)
chr3 (71-211)||(19725758-19725898)
chr3 (71-211)||(11862923-11863063)
chr3 (79-211)||(11298383-11298514)
chr3 (95-209)||(1982681-1982794)
chr3 (112-211)||(11851711-11851810)
chr3 (106-208)||(3389817-3389919)
chr3 (106-208)||(3402837-3402939)
chr3 (95-208)||(12037823-12037936)
chr3 (85-209)||(327025-327148)
chr3 (85-165)||(856314-856394)
chr3 (85-209)||(11557245-11557369)
chr3 (106-209)||(11595020-11595123)
chr3 (106-209)||(15482785-15482887)
chr3 (106-209)||(20461382-20461484)
chr3 (106-209)||(7793231-7793333)
chr3 (106-209)||(14499450-14499552)
chr3 (73-124)||(15877676-15877727)
chr3 (119-205)||(2897718-2897803)
chr3 (106-209)||(30066071-30066173)
chr3 (106-209)||(42326074-42326177)
chr3 (89-155)||(14179624-14179690)
chr3 (111-209)||(55022992-55023089)
chr3 (125-209)||(15877947-15878032)
chr3 (106-209)||(11070193-11070295)
chr3 (106-209)||(11854858-11854960)
chr3 (150-211)||(4589035-4589096)
chr3 (150-211)||(5223182-5223243)
chr3 (150-211)||(12339584-12339645)
chr3 (154-211)||(15964755-15964812)
chr3 (154-211)||(15968679-15968736)
chr3 (154-211)||(15972603-15972660)
chr3 (150-211)||(19775551-19775612)
chr3 (150-211)||(37439898-37439959)
chr3 (106-209)||(11165411-11165513)
chr3 (106-209)||(11300393-11300495)
chr3 (150-211)||(11300692-11300753)
chr3 (150-211)||(15464983-15465044)
chr3 (172-211)||(14665531-14665570)
chr3 (144-209)||(7109823-7109887)
chr3 (144-209)||(7113758-7113822)
chr3 (144-209)||(22321789-22321853)
chr3 (144-209)||(22336844-22336908)
chr3 (144-209)||(27409564-27409628)
chr3 (144-209)||(28949849-28949913)
[»] scaffold0311 (1 HSPs)
scaffold0311 (71-270)||(6924-7123)
[»] chr1 (33 HSPs)
chr1 (71-270)||(6151929-6152128)
chr1 (71-267)||(22831224-22831419)
chr1 (71-208)||(42865057-42865195)
chr1 (83-270)||(21022712-21022899)
chr1 (71-270)||(21714627-21714823)
chr1 (85-211)||(22449126-22449252)
chr1 (71-211)||(18181967-18182107)
chr1 (69-190)||(21787886-21788008)
chr1 (71-195)||(20091319-20091443)
chr1 (85-208)||(18393824-18393947)
chr1 (86-211)||(3472787-3472911)
chr1 (85-208)||(45310227-45310350)
chr1 (118-208)||(8761526-8761616)
chr1 (125-209)||(24783001-24783084)
chr1 (106-209)||(45489624-45489727)
chr1 (106-209)||(3704946-3705049)
chr1 (106-209)||(16080326-16080428)
chr1 (125-211)||(17678488-17678573)
chr1 (71-155)||(48603706-48603790)
chr1 (106-209)||(1010845-1010947)
chr1 (101-190)||(33797674-33797762)
chr1 (72-155)||(22468543-22468626)
chr1 (106-209)||(36819190-36819292)
chr1 (150-211)||(1925391-1925452)
chr1 (150-211)||(20229071-20229132)
chr1 (150-211)||(20924405-20924466)
chr1 (150-203)||(33797408-33797461)
chr1 (144-209)||(16375378-16375442)
chr1 (106-183)||(19212015-19212091)
chr1 (144-209)||(20228729-20228793)
chr1 (144-209)||(21407477-21407541)
chr1 (144-209)||(52639663-52639727)
chr1 (13-53)||(22507876-22507916)
[»] chr2 (35 HSPs)
chr2 (71-270)||(24673650-24673849)
chr2 (71-209)||(22740806-22740945)
chr2 (71-209)||(22758561-22758700)
chr2 (71-270)||(23038112-23038308)
chr2 (71-190)||(22798972-22799092)
chr2 (71-197)||(21918162-21918288)
chr2 (79-211)||(25963571-25963702)
chr2 (79-209)||(22811765-22811896)
chr2 (82-209)||(23103253-23103381)
chr2 (105-208)||(40428597-40428700)
chr2 (71-184)||(23019552-23019666)
chr2 (71-165)||(40622054-40622148)
chr2 (179-270)||(45678074-45678165)
chr2 (85-209)||(25961395-25961518)
chr2 (79-189)||(37524820-37524929)
chr2 (85-209)||(24174932-24175056)
chr2 (85-209)||(24655199-24655323)
chr2 (106-209)||(19688638-19688740)
chr2 (71-148)||(45678001-45678078)
chr2 (106-209)||(24735525-24735627)
chr2 (107-208)||(21327449-21327550)
chr2 (85-205)||(24716391-24716510)
chr2 (106-209)||(10101527-10101629)
chr2 (107-208)||(21318518-21318619)
chr2 (150-205)||(41531266-41531321)
chr2 (150-211)||(30345253-30345314)
chr2 (106-205)||(24870016-24870115)
chr2 (150-211)||(1283172-1283233)
chr2 (150-211)||(31344995-31345056)
chr2 (127-194)||(44370201-44370268)
chr2 (144-209)||(12901432-12901496)
chr2 (144-209)||(15477725-15477789)
chr2 (144-209)||(24649479-24649543)
chr2 (144-209)||(27601918-27601982)
chr2 (144-209)||(41530930-41530994)
[»] scaffold0081 (3 HSPs)
scaffold0081 (71-270)||(14745-14945)
scaffold0081 (71-270)||(23760-23960)
scaffold0081 (71-270)||(39184-39384)
[»] chr5 (40 HSPs)
chr5 (71-270)||(23501191-23501391)
chr5 (71-270)||(23201441-23201642)
chr5 (71-208)||(14079283-14079421)
chr5 (71-270)||(23512179-23512380)
chr5 (71-211)||(21366512-21366652)
chr5 (71-190)||(21873402-21873522)
chr5 (71-209)||(37724038-37724177)
chr5 (71-166)||(26704244-26704339)
chr5 (71-166)||(26973977-26974072)
chr5 (71-212)||(20805680-20805820)
chr5 (106-212)||(20767102-20767207)
chr5 (85-165)||(18769864-18769944)
chr5 (85-153)||(22032507-22032575)
chr5 (95-209)||(123176-123289)
chr5 (85-211)||(23458721-23458846)
chr5 (85-211)||(23462982-23463107)
chr5 (106-209)||(12028446-12028549)
chr5 (85-211)||(23451477-23451602)
chr5 (85-209)||(23572215-23572338)
chr5 (106-209)||(24222009-24222112)
chr5 (118-209)||(22757258-22757349)
chr5 (95-209)||(15236651-15236764)
chr5 (150-211)||(11220531-11220592)
chr5 (150-211)||(11225117-11225178)
chr5 (150-211)||(11228940-11229001)
chr5 (150-211)||(11230929-11230990)
chr5 (111-190)||(18356468-18356546)
chr5 (150-211)||(11226950-11227011)
chr5 (150-211)||(18356075-18356136)
chr5 (150-211)||(20911097-20911158)
chr5 (152-211)||(10753147-10753206)
chr5 (150-205)||(40723849-40723904)
chr5 (142-208)||(17919069-17919134)
chr5 (169-209)||(17410562-17410602)
chr5 (172-211)||(24767493-24767532)
chr5 (166-209)||(31342258-31342301)
chr5 (144-209)||(20295969-20296033)
chr5 (106-209)||(26680715-26680815)
chr5 (106-209)||(26952322-26952422)
chr5 (106-190)||(20910682-20910765)
[»] scaffold0297 (1 HSPs)
scaffold0297 (71-270)||(15515-15711)
[»] scaffold0671 (1 HSPs)
scaffold0671 (71-270)||(6176-6376)
[»] scaffold0035 (1 HSPs)
scaffold0035 (71-211)||(46573-46713)
[»] scaffold0043 (1 HSPs)
scaffold0043 (72-270)||(18317-18512)
[»] chr7 (44 HSPs)
chr7 (71-211)||(12321588-12321728)
chr7 (73-270)||(9703344-9703538)
chr7 (71-211)||(14430012-14430152)
chr7 (71-270)||(18154682-18154877)
chr7 (71-256)||(24054560-24054742)
chr7 (71-209)||(19649330-19649469)
chr7 (85-209)||(3271955-3272079)
chr7 (72-138)||(11880459-11880525)
chr7 (85-165)||(17137923-17138003)
chr7 (106-209)||(12318249-12318351)
chr7 (106-209)||(15605154-15605256)
chr7 (85-153)||(12187205-12187273)
chr7 (101-209)||(16583378-16583484)
chr7 (106-209)||(11312770-11312872)
chr7 (85-209)||(9446019-9446143)
chr7 (117-209)||(15580813-15580904)
chr7 (106-209)||(33229-33331)
chr7 (106-209)||(70647-70749)
chr7 (106-209)||(74756-74858)
chr7 (101-209)||(13635346-13635453)
chr7 (125-208)||(2760265-2760347)
chr7 (106-209)||(20569477-20569580)
chr7 (150-211)||(15083979-15084040)
chr7 (150-211)||(39722049-39722110)
chr7 (106-187)||(42205257-42205338)
chr7 (154-211)||(45170272-45170329)
chr7 (13-53)||(18454045-18454085)
chr7 (152-211)||(25927431-25927490)
chr7 (150-211)||(1859012-1859073)
chr7 (150-211)||(13918706-13918767)
chr7 (144-209)||(39722388-39722452)
chr7 (125-184)||(2530044-2530102)
chr7 (150-205)||(2530316-2530371)
chr7 (172-211)||(2832389-2832428)
chr7 (172-211)||(9751703-9751742)
chr7 (172-211)||(39267847-39267886)
chr7 (144-209)||(12714986-12715050)
chr7 (144-209)||(12718790-12718854)
chr7 (144-209)||(12723701-12723765)
chr7 (144-209)||(16114363-16114427)
chr7 (144-209)||(16117516-16117580)
chr7 (144-209)||(16907121-16907185)
chr7 (144-209)||(18279525-18279589)
chr7 (144-209)||(18283488-18283552)
[»] scaffold0149 (2 HSPs)
scaffold0149 (83-208)||(3877-4003)
scaffold0149 (83-208)||(8308-8434)
[»] scaffold0425 (1 HSPs)
scaffold0425 (71-211)||(290-430)
[»] scaffold0004 (2 HSPs)
scaffold0004 (71-209)||(69930-70069)
scaffold0004 (111-209)||(10471-10568)
[»] scaffold0101 (1 HSPs)
scaffold0101 (69-270)||(8801-8999)
[»] scaffold0220 (1 HSPs)
scaffold0220 (72-270)||(4780-4979)
[»] scaffold0139 (1 HSPs)
scaffold0139 (71-270)||(20061-20256)
[»] scaffold0111 (1 HSPs)
scaffold0111 (71-270)||(32516-32707)
[»] scaffold0174 (1 HSPs)
scaffold0174 (72-208)||(18300-18437)
[»] scaffold0037 (2 HSPs)
scaffold0037 (71-211)||(21415-21555)
scaffold0037 (150-211)||(80616-80677)
[»] scaffold0031 (3 HSPs)
scaffold0031 (74-270)||(65642-65834)
scaffold0031 (106-209)||(53687-53789)
scaffold0031 (150-211)||(36348-36409)
[»] scaffold0080 (1 HSPs)
scaffold0080 (85-211)||(18516-18642)
[»] scaffold0393 (1 HSPs)
scaffold0393 (78-211)||(1623-1756)
[»] scaffold0761 (1 HSPs)
scaffold0761 (72-211)||(6156-6295)
[»] scaffold0131 (1 HSPs)
scaffold0131 (71-270)||(36535-36731)
[»] scaffold0096 (1 HSPs)
scaffold0096 (71-190)||(16195-16315)
[»] scaffold0124 (1 HSPs)
scaffold0124 (92-211)||(42752-42871)
[»] scaffold0346 (1 HSPs)
scaffold0346 (106-211)||(15216-15321)
[»] scaffold0261 (1 HSPs)
scaffold0261 (71-270)||(1420-1613)
[»] scaffold0023 (2 HSPs)
scaffold0023 (71-184)||(38325-38439)
scaffold0023 (74-184)||(23516-23626)
[»] scaffold1895 (1 HSPs)
scaffold1895 (71-190)||(1073-1193)
[»] scaffold1296 (1 HSPs)
scaffold1296 (71-211)||(523-663)
[»] scaffold0555 (1 HSPs)
scaffold0555 (71-209)||(715-855)
[»] scaffold0021 (1 HSPs)
scaffold0021 (71-209)||(174901-175040)
[»] scaffold0615 (1 HSPs)
scaffold0615 (71-211)||(1930-2071)
[»] scaffold0104 (2 HSPs)
scaffold0104 (71-211)||(1960-2099)
scaffold0104 (71-211)||(9642-9781)
[»] scaffold1326 (1 HSPs)
scaffold1326 (108-211)||(1373-1476)
[»] scaffold0412 (1 HSPs)
scaffold0412 (76-211)||(6267-6401)
[»] scaffold0079 (1 HSPs)
scaffold0079 (76-211)||(44211-44345)
[»] scaffold0676 (1 HSPs)
scaffold0676 (85-211)||(4560-4686)
[»] scaffold0102 (1 HSPs)
scaffold0102 (71-195)||(48306-48431)
[»] scaffold0367 (1 HSPs)
scaffold0367 (71-211)||(1027-1166)
[»] scaffold0280 (1 HSPs)
scaffold0280 (85-208)||(19152-19275)
[»] scaffold0476 (2 HSPs)
scaffold0476 (106-208)||(5719-5820)
scaffold0476 (106-208)||(6914-7015)
[»] scaffold0198 (1 HSPs)
scaffold0198 (94-270)||(23924-24094)
[»] scaffold0184 (1 HSPs)
scaffold0184 (85-208)||(4085-4208)
[»] scaffold0015 (1 HSPs)
scaffold0015 (105-208)||(192197-192300)
[»] scaffold0215 (1 HSPs)
scaffold0215 (71-165)||(27002-27096)
[»] scaffold0210 (2 HSPs)
scaffold0210 (89-165)||(21670-21746)
scaffold0210 (89-165)||(29562-29638)
[»] scaffold0550 (1 HSPs)
scaffold0550 (95-209)||(7603-7717)
[»] scaffold0439 (2 HSPs)
scaffold0439 (106-208)||(2317-2419)
scaffold0439 (106-208)||(10177-10279)
[»] scaffold0003 (3 HSPs)
scaffold0003 (95-209)||(413921-414035)
scaffold0003 (101-190)||(71454-71542)
scaffold0003 (150-203)||(71188-71241)
[»] scaffold0171 (1 HSPs)
scaffold0171 (107-208)||(35393-35494)
[»] scaffold1124 (1 HSPs)
scaffold1124 (85-165)||(2055-2135)
[»] scaffold0017 (2 HSPs)
scaffold0017 (105-205)||(15090-15190)
scaffold0017 (105-205)||(19612-19712)
[»] scaffold1220 (1 HSPs)
scaffold1220 (106-211)||(1922-2026)
[»] scaffold0637 (1 HSPs)
scaffold0637 (106-209)||(8693-8796)
[»] scaffold0036 (1 HSPs)
scaffold0036 (106-209)||(66297-66399)
[»] scaffold0574 (1 HSPs)
scaffold0574 (188-266)||(7771-7849)
[»] scaffold0327 (1 HSPs)
scaffold0327 (106-175)||(445-514)
[»] scaffold0114 (1 HSPs)
scaffold0114 (85-165)||(7469-7549)
[»] scaffold0216 (1 HSPs)
scaffold0216 (132-211)||(17019-17097)
[»] scaffold0093 (1 HSPs)
scaffold0093 (110-184)||(4690-4764)
[»] scaffold0044 (2 HSPs)
scaffold0044 (106-209)||(13026-13128)
scaffold0044 (125-206)||(19313-19393)
[»] scaffold0001 (2 HSPs)
scaffold0001 (106-209)||(422413-422516)
scaffold0001 (117-209)||(173412-173503)
[»] scaffold0029 (5 HSPs)
scaffold0029 (85-209)||(12894-13017)
scaffold0029 (106-209)||(80834-80936)
scaffold0029 (150-211)||(80498-80559)
scaffold0029 (144-209)||(61532-61596)
scaffold0029 (144-209)||(65448-65512)
[»] scaffold0008 (1 HSPs)
scaffold0008 (117-211)||(30637-30730)
[»] scaffold0177 (1 HSPs)
scaffold0177 (106-206)||(13369-13468)
[»] scaffold0349 (1 HSPs)
scaffold0349 (106-209)||(12544-12646)
[»] scaffold0228 (1 HSPs)
scaffold0228 (143-209)||(18551-18616)
[»] scaffold0405 (1 HSPs)
scaffold0405 (101-202)||(9542-9642)
[»] scaffold0141 (1 HSPs)
scaffold0141 (150-211)||(14349-14410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (150-211)||(207764-207825)
[»] scaffold0012 (1 HSPs)
scaffold0012 (150-211)||(189639-189700)
[»] scaffold0525 (1 HSPs)
scaffold0525 (106-209)||(3757-3859)
[»] scaffold0483 (1 HSPs)
scaffold0483 (85-176)||(485-576)
[»] scaffold0342 (1 HSPs)
scaffold0342 (106-208)||(7152-7253)
[»] scaffold0109 (3 HSPs)
scaffold0109 (106-176)||(45272-45342)
scaffold0109 (150-211)||(36202-36263)
scaffold0109 (144-209)||(35863-35927)
[»] scaffold0299 (1 HSPs)
scaffold0299 (150-211)||(6798-6859)
[»] scaffold0157 (1 HSPs)
scaffold0157 (150-211)||(32922-32983)
[»] scaffold0051 (1 HSPs)
scaffold0051 (150-211)||(31002-31063)
[»] scaffold0120 (1 HSPs)
scaffold0120 (106-202)||(19899-19994)
[»] scaffold0293 (1 HSPs)
scaffold0293 (150-204)||(20391-20445)
[»] scaffold0229 (1 HSPs)
scaffold0229 (150-211)||(11763-11824)
[»] scaffold0410 (1 HSPs)
scaffold0410 (118-209)||(11511-11592)
[»] scaffold0401 (1 HSPs)
scaffold0401 (13-57)||(2932-2976)
[»] scaffold0324 (1 HSPs)
scaffold0324 (71-103)||(15642-15674)
[»] scaffold1052 (1 HSPs)
scaffold1052 (172-211)||(3035-3074)
[»] scaffold0166 (1 HSPs)
scaffold0166 (172-211)||(9990-10029)
[»] scaffold0372 (1 HSPs)
scaffold0372 (144-209)||(5021-5085)
[»] scaffold0268 (1 HSPs)
scaffold0268 (144-209)||(928-992)
[»] scaffold0028 (1 HSPs)
scaffold0028 (144-209)||(58639-58703)
[»] scaffold0022 (1 HSPs)
scaffold0022 (182-211)||(73725-73754)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 69 - 270
Target Start/End: Complemental strand, 12570296 - 12570095
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaag 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12570296 acctgtgtcgcataacttgtttagagatggacccttgggtagtaatgtgacctatataggatgttaactgcaatctgtgaagctgttatgaaatgttaag 12570197  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12570196 ttgattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatgcttgattttatttgatatctttatatgatg 12570097  T
Q  269 tc 270  Q
    ||    
T  12570096 tc 12570095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 23843751 - 23843613
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23843751 ctgtgtcgcataatttgattagagatggacccttgggtggtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaatgt 23843652  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  23843651 tgattataatgtgttttaatgattaattgtattacttga 23843613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 44675905 - 44675767
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||    
T  44675905 ctgtgtcgcataatttgattagagatggacccctaggtagtaatgtgacctatttaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 44675806  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    ||| ||| |||||||||||||||||||||||||||||||    
T  44675805 tgaatatgatgtgatttaatgattaattgcattacttga 44675767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 13569783 - 13569612
Alignment:
Q  73 gtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttg 171  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13569783 gtgtcgcataatttgattagagatggacccttgggtattaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgttg 13569684  T
Q  172 attataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgctttt 247  Q
    | ||| ||||||  | ||| ||||||||||||||||||    | | ||||||||||||||| |||||||| |||||    
T  13569683 aatatgatgtgagatgatgtttaattgcattacttgaa----ttatgaatgaatgattgagatgatgcttactttt 13569612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 15125001 - 15125130
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gtt 170  Q
    |||||||||||||||| |||||| ||||||| |||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||    
T  15125001 tgtgtcgcataatttgtttagagttggacccctgggtagtaaagtgacctttttaa-atgttaactgcaatctgtgaagctgttatgaaatgttaatgtt 15125099  T
Q  171 gattataatgtgatttaatgattaattgcat 201  Q
    |||||||||||||||||||||||||||||||    
T  15125100 gattataatgtgatttaatgattaattgcat 15125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 15094046 - 15093926
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||    
T  15094046 ctgtgtcgcataatttgattagagatggacccttggttagtaatgtgacctatataagaagttaactgcaatctctgaagctgttatgaaatgttaatgt 15093947  T
Q  170 tgattataatgtgatttaatg 190  Q
    ||| ||| ||||||| |||||    
T  15093946 tgaatatgatgtgatataatg 15093926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 16356799 - 16356938
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| |||| || ||||||    
T  16356799 ctgtttcgcataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtt-tgaactgctaagtt 16356897  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
      || |||||||||||||||||||| |||||||||||||||    
T  16356898 ttttgtaatgtgatttaatgattaaatgcattacttgaaat 16356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 16487924 - 16488064
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||| | ||||||||||| |||||||||||| ||||| ||||||||||| ||  ||||||||||||  |||||| ||||||| |    
T  16487924 ctgtttcgcataagttgatttgggatggacccttaggtagtaatgtgtcctatttaagatgttaattgagatctgtgaagctactatgaactgttaagct 16488023  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  16488024 gattataatgtgatttaatgattaaatgcattacttgaaat 16488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 16348511 - 16348650
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| || | || || ||||||    
T  16348511 ctgtttcgcataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct-ttttaaactgctaagtt 16348609  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||| ||||    
T  16348610 gtttgtaatgtgatttaatgattaaatgcattacttaaaat 16348650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 15353188 - 15353290
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||||||| ||| ||||||||||||||||| ||||||| || || |||||||||||||||||||| |||||||||    
T  15353188 ggtagtaatgaaacctatctaagatgttaactggaatttgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattact 15353287  T
Q  206 tga 208  Q
    |||    
T  15353288 tga 15353290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 5338841 - 5338964
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||||||||||||||| || |||||| ||||||||||||||   ||||| ||||||| |||||||    
T  5338841 ttgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatctgagaagctgttatgaaccattaagctgattatgatgtgat 5338940  T
Q  185 ttaatgattaattgcattacttga 208  Q
    ||| ||||||||||||||||||||    
T  5338941 ttattgattaattgcattacttga 5338964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 15121649 - 15121786
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatg-ttaagt 169  Q
    |||||||| |||| ||| ||||| ||||||| || |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||| ||| || |||    
T  15121649 ctgtgtcgaataacttgtttagacatggaccattaggtagtaatgagacctatataagaagttaactgcaatctgtgaggctgatatgagatgtttgagt 15121748  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||| ||||  | ||||| |||  |||||||||||||    
T  15121749 tgattatgatgtattataatgttta--tgcattacttgaa 15121786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 36133844 - 36133945
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  36133844 ggtattaatgagacctatttaagatattaactgggaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 36133942  T
Q  206 tga 208  Q
    |||    
T  36133943 tga 36133945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 17810496 - 17810394
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||||||||| | ||||||||||||||| ||||| |||||||||||    
T  17810496 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgttaagt-gtttataatgtgatttattgattgattgcattact 17810398  T
Q  206 tgaa 209  Q
    ||||    
T  17810397 tgaa 17810394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 25555741 - 25555638
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  || ||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  25555741 ggtagtaatgaaacttatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 25555642  T
Q  206 tgaa 209  Q
    ||||    
T  25555641 tgaa 25555638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 16351709 - 16351833
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  |||||| |||||||||| | | ||| ||||||| | ||| ||| |||||||||| || |||||||||    
T  16351709 ttgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaatttgtgaagtttttaagaactgttaagttgtttgtaatgtgat 16351808  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    |||| |||||| |||||||||||||    
T  16351809 ttaacgattaaatgcattacttgaa 16351833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 11250442 - 11250545
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | || ||||| ||||| ||| |||||||||| || ||||||||||||| |||||| ||||||||     
T  11250442 ggtagtaatgaaacctatttaagatgttaactgagacctatgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattaca 11250541  T
Q  206 tgaa 209  Q
    ||||    
T  11250542 tgaa 11250545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 14757304 - 14757406
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  14757304 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 14757402  T
Q  206 tgaa 209  Q
    ||||    
T  14757403 tgaa 14757406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 43256038 - 43256141
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgca 200  Q
    |||| |||| ||||| ||||||| ||||||||||||||  | |||||||||| || |||||||||||| ||||||||||||||| |||| ||||  ||||    
T  43256038 ccttaggtactaatgagacctatttaagatgttaactgggaactgtgaagctattgtgaaatgttaag-tgattataatgtgatataat-attatatgca 43256135  T
Q  201 ttactt 206  Q
    ||||||    
T  43256136 ttactt 43256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 27534250 - 27534148
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| | ||||||||||||  |  ||||||||| |  ||||||| ||||||| ||||||||||||||| ||||| |||||||||||    
T  27534250 ggtactaatgagacctatctgagatgttaactgttaattgtgaagctatattgaaatgctaagttg-ttataatgtgatttattgattgattgcattact 27534152  T
Q  206 tgaa 209  Q
    ||||    
T  27534151 tgaa 27534148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 10712700 - 10712639
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  10712700 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 10712639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 10926470 - 10926409
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  10926470 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 10926409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 12487555 - 12487494
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  12487555 gctgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaat 12487494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 14954433 - 14954490
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  14954433 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 14954490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 25689710 - 25689653
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  25689710 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 25689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 43256339 - 43256400
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  43256339 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 43256400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 13812966 - 13813005
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  13812966 attataatgtgaattaatgattaaatgcattacttgaaat 13813005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 20157407 - 20157446
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  20157407 attataatgtgaattaatgattaaatgcattacttgaaat 20157446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 4561254 - 4561318
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  4561254 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 4561318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 5756858 - 5756922
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  5756858 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 5756922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 9556716 - 9556652
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  9556716 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 9556652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 22634369 - 22634406
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  22634369 attataatgtgaattaatgattaaatgcattacttgaa 22634406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 69 - 270
Target Start/End: Complemental strand, 24755996 - 24755795
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaag 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24755996 acctgtgtcgcataacttgtttagagatggacccttgggtagtaatgtgacctatataggatgttaactgcaatctgtgaagctgttatgaaatgttaag 24755897  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  24755896 ttgattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatgcttgatttaatttgatatctttatatgatg 24755797  T
Q  269 tc 270  Q
    ||    
T  24755796 tc 24755795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 85 - 270
Target Start/End: Complemental strand, 377537 - 377352
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  377537 ttgattagggatggacccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagctgatcataatgtgat 377438  T
Q  185 ttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  377437 ttaatgattaattgcattacttgagatgttaatgaatgaatgattgagttgatgcttgcttctatttgatatctttacatgatgtc 377352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 269
Target Start/End: Complemental strand, 16185003 - 16184802
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa- 167  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||     
T  16185003 acctgtgtcgcataatttgattagagatggacccctgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgatatgagatgttaat 16184904  T
Q  168 gttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgat 267  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||||||||||||| |||||||||||||| ||| |||||| || |||||    
T  16184903 gttgattataatgtgatttaatgtttaattgcattgcttgaaatgttaataaatgaatgattgagatgatgcttgcttttatttaatatctctacatgat 16184804  T
Q  268 gt 269  Q
    ||    
T  16184803 gt 16184802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 19259443 - 19259627
Alignment:
Q  86 tgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatt 185  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19259443 tgattagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatctgtgaagctattatgaactgttaagttgattataatgtgatt 19259542  T
Q  186 taatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  19259543 taatgattaatttcattacttgagatgttaatgaatgaatgattgagttgatgcttgcttttatttgatatccctatatgatgtc 19259627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 21168567 - 21168767
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||| |||||||||||||||||| |||||||||||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  21168567 ctgtgtcgcatagtttgattagagatggacctttgggtagtaatataacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 21168666  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| |||| |  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21168667 tgaatatgatgtaagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 21168766  T
Q  270 c 270  Q
    |    
T  21168767 c 21168767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 19899368 - 19899230
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||    
T  19899368 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatttaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 19899269  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    ||| ||| |||||||||||||||||||| ||||||||||    
T  19899268 tgaatatgatgtgatttaatgattaatttcattacttga 19899230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 19983366 - 19983228
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||    
T  19983366 ctgtgtcgcataatttgattagagatggaaccctgggtagtaatgtgacctatttaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 19983267  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    ||| ||| |||||||||||||||||||||||||||||||    
T  19983266 tgaatatgatgtgatttaatgattaattgcattacttga 19983228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 20465899 - 20466025
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    |||||||| || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20465899 ttgattagggacggacccttaggtagtaatgtgacctatataagaggttaactgcaatctgtgaagctgttatgaaatgctaagttgattataatgtgat 20465998  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||    
T  20465999 ttaatgattaattgcattacttgaaat 20466025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 21161904 - 21162094
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||| ||| |||||||||||||||||| |||||||||||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  21161904 ctgtgtcgtatagtttgattagagatggacctttgggtagtaatataacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 21162003  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||          ||||||||||||||||||||| |||  |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21162004 tgaatatgatgt----------ttaattgcattacttgaaatgttaataaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 21162093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 270
Target Start/End: Original strand, 17353784 - 17353979
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatg-ttaagtt 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||||||||||||||| ||| |||    
T  17353784 tgtgtcgcataattcgattagagatggacccttgggtagtaatgagacctatataagaagttaattgtaatctgtgaagctgttatgaaatgtttatgtt 17353883  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    || ||| ||||||  | ||| || ||| |||||||||||    | | ||||||||||||||| |||||||||||| | ||||||||| ||||||||||||    
T  17353884 gaatatgatgtgagatgatgtttgatttcattacttgaa----ttatgaatgaatgattgagatgatgcttgcttgtatttgatatcgttatatgatgtc 17353979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 30643137 - 30643278
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaa-gctgttatgaaatgttaagt 169  Q
    |||| ||||| || |||||||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  30643137 ctgtttcgcacaaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgcaatctgtgaaagctgttacgaactgttaagt 30643236  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  30643237 tgattataatatgatttaatgattaattgcattacttgaaat 30643278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 17926553 - 17926692
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||| |||| || ||||||    
T  17926553 ctgtttcgcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaattgaaatctgtgaagctgtt-tgaactgctaagtt 17926651  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||||||||    
T  17926652 gtttgtaatgtgatttaatgattaaatgcattacttgaaat 17926692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 23776681 - 23776775
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  23776681 ctgtgtcgcataatttggttagagatggacacttaggtagtaatgtgacctatataagaagttaactgcaatttgtgaagctgttatgaaatgtt 23776775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 15602863 - 15603003
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaa-tgttaagt 169  Q
    |||| |||||||| |||||||| | |||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| || |||||    
T  15602863 ctgtttcgcataagttgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtt-tgaaactgctaagt 15602961  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||  | |||||||||||||||||||| |||||||||||||||    
T  15602962 tgtctgtaatgtgatttaatgattaaatgcattacttgaaat 15603003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 16410101 - 16410240
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||||||||| || |||||||| | ||||||||| |||||||||||||||||| |||||| ||||||| ||| ||||| |||||| |||| || ||||||    
T  16410101 ctgtgtcgcacaaattgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaggctgtt-tgaactgctaagtt 16410199  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||||||||    
T  16410200 gtttgtaatgtgatttaatgattaaatgcattacttgaaat 16410240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 15611315 - 15611455
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaa-tgttaagt 169  Q
    |||| |||||||| |||||||| | |||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |  |||||    
T  15611315 ctgtttcgcataagttgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtt-tgaaactactaagt 15611413  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||  | |||||||||||||||||||| |||||||||||||||    
T  15611414 tgtctgtaatgtgatttaatgattaaatgcattacttgaaat 15611455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 21395828 - 21395910
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||||||    
T  21395828 ctgtgtcgcatgatttgattagagatggacccttgggtagtaatgagacctatataagaagttaattgtaatctgtgaagctg 21395910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 21790321 - 21790403
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||||||    
T  21790321 ctgtgtcgcatgatttgattagagatggacccttgggtagtaatgagacctatataagaagttaattgtaatctgtgaagctg 21790403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20856306 - 20856409
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||||||||||  ||||||||| |||  ||||||||| |||||||||| || |||| || || |||||||||||||||||||| |||||||||    
T  20856306 ggtagtaatgtgacctattaaagatgttagctgagatctgtgaacctgttatgaattgctaagctgtttgtaatgtgatttaatgattaaatgcattact 20856405  T
Q  206 tgaa 209  Q
    ||||    
T  20856406 tgaa 20856409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 19976718 - 19976647
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaat 142  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||| ||||||||||||    
T  19976718 ctgtgtcgcataatttgattagagatggaaccctaggtagtaatgtgacctatttaagaagttaactgcaat 19976647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 21389298 - 21389380
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| || ||||| || ||| ||||||||||    
T  21389298 ctgtgtcgcatgatttgattagagatggacccttgggtagtaatgagaccaatatatgaagttaattgtaatatgtgaagctg 21389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 22010579 - 22010664
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||| ||||||||| | |||| |||| || ||||||| || |||||||||||||||||||| |||||||||||||||    
T  22010579 taagatgttaactgaaatctgtgaggttgtt-tgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaat 22010664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 16861208 - 16861312
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||| || ||| ||| ||||| |||| ||| ||||||| | |||||| |||| |||||||||| || |||||||||||||||||||| | |||||||    
T  16861208 ggtagtagtgagacatatttaagaggttagctgaaatctgtaaggctgtt-tgaactgttaagttgtttgtaatgtgatttaatgattaaatacattact 16861306  T
Q  206 tgaaat 211  Q
    ||||||    
T  16861307 tgaaat 16861312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 21828276 - 21828337
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  21828276 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 21828337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 14398035 - 14398096
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  14398035 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 14398096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 18862911 - 18862968
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  18862911 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 18862968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 21410794 - 21410733
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  21410794 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 21410733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 21805286 - 21805225
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  21805286 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 21805225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 39094861 - 39094907
Alignment:
Q  162 tgttaagttgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||||||| || |||||| ||||||||||||| ||||||||||||    
T  39094861 tgttaagttgtttgtaatgtaatttaatgattaaatgcattacttga 39094907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 19278203 - 19278267
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  19278203 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 19278267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21972505 - 21972569
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  21972505 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 21972569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21976590 - 21976654
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  21976590 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 21976654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 22112037 - 22111973
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  22112037 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 22111973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 43251999 - 43251935
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  43251999 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 43251935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 39094823 - 39094855
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactg 138  Q
    |||||||||||||||||| ||||||||||||||    
T  39094823 ggtagtaatgtgacctatttaagatgttaactg 39094855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 15894274 - 15894474
Alignment:
Q  70 cctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagt 169  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  15894274 cctgtgtcgcataacttgtttagagatggacccttgggtagtaatgtgacctatataggatgttaactacaatctgtgaagctgttatgaaatgttaagt 15894373  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15894374 tgattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatgcttgattttatttgatatctttatatgatgt 15894473  T
Q  270 c 270  Q
    |    
T  15894474 c 15894474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 21739868 - 21740067
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||| ||| | ||| |||| ||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  21739868 ctgtgtcacatgagttgtttagggatggactcttaggtagtaatgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgttaagct 21739967  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    | ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| | | ||||||||||||||||||||||    
T  21739968 ggttataatgtgacttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatacttgcatctatttgatatctttatatgatgtc 21740067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 18907381 - 18907241
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  18907381 ctgtgtcgcatgaattgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgcaatatgtgaagctgttatgaactgttaagtt 18907282  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  18907281 cattataatgtgatttaatgattaattgcattacttgaaat 18907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 25642029 - 25642168
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||| ||||||| ||    
T  25642029 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctttgaagttgttatgagatgttaatgt 25642128  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    
T  25642129 tgaatatgatgtgatataatgattaattgcattacttgaa 25642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 19863253 - 19863112
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  19863253 ctgtgtcacatcatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 19863154  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||| | | ||||||| ||||||||||||||||||||||||||    
T  19863153 tgaatgtgatgtgatataatgattaattgcattacttgaaat 19863112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 19873395 - 19873254
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  19873395 ctgtgtcgcatcattttattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 19873296  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||| | | ||||||| ||||||||||||||||||||||||||    
T  19873295 tgaatgtgatgtgatataatgattaattgcattacttgaaat 19873254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 71 - 257
Target Start/End: Complemental strand, 22439075 - 22438892
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  22439075 ctgtgtcgcataattcgatttgagatggacccttgggtagtaatgagatctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 22438976  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatc 257  Q
    ||||||| ||||||| ||| | |||||| |||||||||||    | |||||||||||||| || |||| |||||||||  ||||||||    
T  22438975 tgattatgatgtgatataaagtttaattacattacttgaa----ttacgaatgaatgattaagatgatacttgcttttacttgatatc 22438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 71 - 257
Target Start/End: Complemental strand, 22432525 - 22432342
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||| |  ||    
T  22432525 ctgtgtctcattatttgatttgagatggacccttgggtagtaatgagacctatataagaagttaactacaatctgtgaagctgttatgagatgtcagtgt 22432426  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatc 257  Q
    ||||||| ||||||| || || |||||| |||||||||||    | || |||||||||||||| ||||  ||||||||  ||||||||    
T  22432425 tgattatgatgtgatatattgtttaattacattacttgaa----ttacaaatgaatgattgagatgatatttgcttttacttgatatc 22432342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 21834736 - 21834874
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| |||||||||||  |||||||| |||||||| |||||||||||||| |||||||||||||||  | || || ||||||    
T  21834736 ctgtttcgcataaattgattagggatggacccttcagtagtaatctgacctatttaagatgttaactgaaatctgtgaagctgt--ttaactgctaagtt 21834833  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  21834834 gattataatgtgatttaatgattaaatgtattacttgaaat 21834874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 22334737 - 22334877
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||| || | || |     
T  22334737 ctgtgtcgcataatttgattagagttggacccctgggtagcaatgagacctatataagaagttaactgcaatctgtaaagctgttatgagatataaatgg 22334836  T
Q  170 tgattataatgtgatttaatgatt-aattgcattacttgaa 209  Q
    |||  ||||||||||||||||||| ||||||| ||||||||    
T  22334837 tgaacataatgtgatttaatgattaaattgcactacttgaa 22334877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 17804421 - 17804319
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  17804421 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 17804323  T
Q  206 tgaa 209  Q
    ||||    
T  17804322 tgaa 17804319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 19790660 - 19790763
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  19790660 ggtagtaatgaaacctatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 19790759  T
Q  206 tgaa 209  Q
    ||||    
T  19790760 tgaa 19790763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20907863 - 20907966
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||||||  |||||| |||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  20907863 ggtagtaatgaaacctatttaagatgttaactagaatctgggaagttgttaagaattgttaagttgtttgtaatgtgatttaacgattaaatgcattact 20907962  T
Q  206 tgaa 209  Q
    ||||    
T  20907963 tgaa 20907966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 22863170 - 22863068
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || |||||||||||  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  22863170 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 22863072  T
Q  206 tgaa 209  Q
    ||||    
T  22863071 tgaa 22863068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 16523249 - 16523331
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    |||| |||||||| |||||||| | |||| |||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  16523249 ctgtttcgcataaattgattagggttggatccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctg 16523331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 18180708 - 18180623
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||| ||||||| | |||||| | || |||||||||| || |||||||||||||||||||| |||||||||||||||    
T  18180708 taagatgttaactgaaatctgtaaggctgtt-tcaactgttaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaat 18180623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 23657302 - 23657403
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||| ||| |||| | ||||||||||||  |||||||| |||||||||| |||||||| || || ||||||||||||| |||||| |||||||||    
T  23657302 ggtagtaatatgatctatgtgagatgttaactgagatctgtgaggctgttatgatatgttaagctg-ttgtaatgtgatttaaagattaaatgcattact 23657400  T
Q  206 tga 208  Q
    |||    
T  23657401 tga 23657403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 22429923 - 22430014
Alignment:
Q  117 gacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||| |||||||||| |||  | |||||||| | |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  22429923 gacctatttaagatgttagctgagaactgtgaagttattatgaaatgctaagt-gattataatgtgatttattgattgattgcattacttgaa 22430014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 14472494 - 14472392
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  14472494 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 14472396  T
Q  206 tgaa 209  Q
    ||||    
T  14472395 tgaa 14472392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 25767050 - 25767152
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | ||||||| || |||||||||| ||||| ||||||||||| ||||| ||||| |||||||||||    
T  25767050 ggtactaatgagacctatttaagatattaactgagaactgtgaaactattatgaaatgctaagt-gattataatgtaatttattgattgattgcattact 25767148  T
Q  206 tgaa 209  Q
    ||||    
T  25767149 tgaa 25767152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 27567503 - 27567593
Alignment:
Q  118 acctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||| |||||||| | | | ||||||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| ||||||||||||    
T  27567503 acctatttaagatgtcagccgaaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttga 27567593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 16760139 - 16760078
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  16760139 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 16760078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 27415819 - 27415907
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatg 190  Q
    |||| |||| ||||| ||||||| ||||||||||||||  | |||||||||| || |||||||||||| ||||||||||||||| |||||    
T  27415819 ccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag-tgattataatgtgatataatg 27415907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 31478072 - 31478133
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| |||||||||||||||    
T  31478072 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaat 31478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 18955645 - 18955747
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||||||||||||||||||  |  ||||||||| |  ||||||| |||| || ||||||||||||| | ||||| |||||||||||    
T  18955645 ggtactaatgagacctatataagatgttaactgttaattgtgaagctatattgaaatgctaag-tgtttataatgtgattgattgattgattgcattact 18955743  T
Q  206 tgaa 209  Q
    ||||    
T  18955744 tgaa 18955747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 22408205 - 22408290
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || |||||||||  ||||| |||| || ||||||| || ||||||||||||| |||||| |||||||||||||||    
T  22408205 taagatgttaattgaaatctgtgagactgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaat 22408290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 1644552 - 1644491
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  1644552 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 1644491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 16523330 - 16523371
Alignment:
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  16523330 tgattataatgtgatttaatgattaattgcattacctgaaat 16523371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 22948948 - 22948891
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  22948948 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 22948891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 22952904 - 22952847
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  22952904 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 22952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 23414824 - 23414763
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  23414824 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 23414763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 23871392 - 23871335
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  23871392 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 23871335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 23875348 - 23875291
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  23875348 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 23875291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 27556582 - 27556521
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  27556582 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 27556521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 27416120 - 27416175
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| |||||||||    
T  27416120 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 27416175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 31164691 - 31164744
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgaccta 122  Q
    |||||||||||||  ||||||||||||||||||| ||||||||| || ||||||    
T  31164691 acctgtgtcgcatgttttgattagagatggacccctgggtagtagtgagaccta 31164744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 15041396 - 15041480
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgtt 155  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||| ||||||   | |||||||  | |||||||| ||||||||    
T  15041396 ctgtatcgcatgttttgattagagatggacccctgggtagtaatgagacctaatgatgatgttagatacaatctgtaaagctgtt 15041480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 22059645 - 22059712
Alignment:
Q  127 agatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    |||||||||  | ||| ||||||||||||||||| | ||||| ||||||| |||||||||| ||||||    
T  22059645 agatgttaaacgaaatatgtgaagctgttatgaactattaagctgattatgatgtgatttattgatta 22059712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 14472100 - 14472054
Alignment:
Q  165 taagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  14472100 taagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 14472054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 18956040 - 18956086
Alignment:
Q  165 taagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  18956040 taagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 18956086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 1644891 - 1644827
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  1644891 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 1644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 11567048 - 11566984
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  11567048 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 11566984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 19870776 - 19870712
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  19870776 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 19870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 23395254 - 23395190
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  23395254 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 23395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 23990106 - 23990042
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  23990106 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 23990042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 8244019 - 8243983
Alignment:
Q  173 ttataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  8244019 ttataatgtgatttattgattgattgcattacttgaa 8243983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 69 - 269
Target Start/End: Original strand, 34754 - 34954
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaag 168  Q
    |||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34754 acctttgtcacataacttgtttagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaattgttaag 34853  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  34854 ttgattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatgcttgattttatttgatatctttatatgatg 34953  T
Q  269 t 269  Q
    |    
T  34954 t 34954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 69 - 270
Target Start/End: Original strand, 13921 - 14122
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaag 168  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13921 acctgtgtcgcataacttatttagagaaggacccttgggtagtaaaatgacctatataggatgttaactgaaatctgtgaagctgttatgaaatgttaag 14020  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  14021 ttgattataatgtgatttaatgattaattgaattacttgaaatgttaatgaatgaatgattgagttgatgcttgatttaatttgatatctttatatgatg 14120  T
Q  269 tc 270  Q
    ||    
T  14121 tc 14122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 144; Significance: 9e-76; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 3112 - 2913
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| | ||||| ||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  3112 ctgtgtcgcataaattgattagggttggactcttaggtagtagtgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgttaagct 3013  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  3012 gattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatacttgcttctatttgatatctttatatgatgtc 2913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 6778 - 6579
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| | ||||| ||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  6778 ctgtgtcgcataaattgattagggttggactcttaggtagtagtgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgttaagct 6679  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  6678 gattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatacttgcttctatttgatatctttatatgatgtc 6579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 15060564 - 15060365
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15060564 ctgtgtcgcatgaattgattagggatggacccttaggtagtattgtgacctatataagatggtaactgcaatctgtgaagctattatgaactgttaagtt 15060465  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  15060464 gattataatgtgatttaatgattaatttcattacttgagatgttaatgaatgaatgattgagttgatgcttgcttttatttgatatccctatatgatgtc 15060365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 85 - 270
Target Start/End: Complemental strand, 16910008 - 16909823
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16910008 ttgattagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatctgtgaagcttttatgaattgttaagttgattataatgtgat 16909909  T
Q  185 ttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  16909908 ttaatgattaattttattacttgagatgttaatgaatgaatgattgagttgatgcttgcttttatttgatatccctatatgatgtc 16909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 15051788 - 15051589
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  15051788 ctgtgtcgcatgaattgattagggatggacccttaggtagtattgtgacctatataagatgttaactgcaatttgtgaagctattatgaactgttaagtt 15051689  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||||||||||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||||||||||| |||| ||||||||   |||||||||||    
T  15051688 gattataatgtgatttaatgattaatttcattacctgagatgttaatgaatgaatgattgagttgatgcttgattttatttgatattcctatatgatgtc 15051589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 270
Target Start/End: Original strand, 23052921 - 23053123
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaag 168  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||||| | |||| | ||||||||| ||||||||| |||||    
T  23052921 acctgtgtcgcataacttgattagagatggacccctgggtagtaatgtgatctatttaggatgtttaatgcagtttgtgaagctattatgaaattttaag 23053020  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatg-gtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgat 267  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  23053021 ttgtttataatgtgatttaattattaattgcattacttgaaatgattaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgat 23053120  T
Q  268 gtc 270  Q
    |||    
T  23053121 gtc 23053123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 270
Target Start/End: Complemental strand, 16369666 - 16369481
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    |||||||| |||  |||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  16369666 ttgattagggatacacccttaggtagtaatgtgatctatataagatgttaactccaatatgtgaagctgttatgaactgttaagttgattataatgtgat 16369567  T
Q  185 ttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||| ||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  16369566 ttaatcattaatttcattacttgagatgttaatgaatgaatgattgagttgatgcttgcttttatttgatatccctatatgatgtc 16369481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 14878351 - 14878552
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggaccct-tgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-g 168  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |    
T  14878351 ctgtgtcgcataatttgattagagatggaccccctaggtagtaatgtgacttatataagaagttaactgcaatctgtgaagctattatgaaatgttaatg 14878450  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||| ||| |||| |  | | | ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  14878451 ttgaatatgatgtaagatgaagtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatccttatatgatg 14878550  T
Q  269 tc 270  Q
    ||    
T  14878551 tc 14878552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 17524998 - 17525194
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  17524998 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 17525097  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||  | | | ||||||||||||||||||    | | ||||||||||||||| |||||| | ||||| ||||||||| |||| ||||||    
T  17525098 tgaatatgatgtgagatgacgtttaattgcattacttgaa----ttatgaatgaatgattgagatgatgcatacttttatttgatatcgttatgtgatgt 17525193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 12173007 - 12172877
Alignment:
Q  140 aatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgc 239  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |    
T  12173007 aatctgtgaagctgttatgaaatgttaagctgattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttggtac 12172908  T
Q  240 ttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||| ||||||||||||| ||||||||    
T  12172907 ttgcttttatttgatatctttacatgatgtc 12172877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 23408705 - 23408509
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||||||| ||||||  ||    
T  23408705 ctgtgtcgcataatttgattagagatggacccttgggtagtattgttacctattttagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 23408606  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||| ||||| |||||| |||||||||||    | | ||||||||||||||| ||||||||||||||  |||||||| || ||||||||    
T  23408605 tgaatatgatgtgatataatgtttaattacattacttgaa----ttatgaatgaatgattgagatgatgcttgcttttaattgatatcgttgtatgatgt 23408510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 211
Target Start/End: Complemental strand, 322856 - 322721
Alignment:
Q  76 tcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgatta 175  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||   |||||||||||||||||||| ||||||| ||||||    
T  322856 tcgcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactaagatctgtgaagctgttatgaagtgttaagctgatta 322757  T
Q  176 taatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||||||||||||||    
T  322756 taatgtgatttaatgattaattgcattacttgaaat 322721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 18383763 - 18383903
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||||||  ||| |||||||||||||||| ||||||| |    
T  18383763 ctgtttcgcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatcagtgaagctgttatgaactgttaagct 18383862  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  18383863 gattttaatgtgatttaatgattaattgcattacttgaaat 18383903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 23077324 - 23077513
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatg-ttaagt 169  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||| |||| ||| |||||||||||||||||||| ||| ||    
T  23077324 ctgtgtcgcataatttgattagagatggacccttaggtagtaatgagacctatatgagaagtttactgtaatttgtgaagctgttatgaaatgtttatgt 23077423  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    || |||| ||||          ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||| ||| ||||||||| |||||||||||    
T  23077424 tggttatgatgt----------ttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgtttgc-tttatttgatatccttatatgatgt 23077512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 12496527 - 12496388
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| |||| || ||||||    
T  12496527 ctgtttcgcataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtt-tgaactgctaagtt 12496429  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||||||||    
T  12496428 gtttgtaatgtgatttaatgattaaatgcattacttgaaat 12496388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 19725758 - 19725898
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| ||||||||||||||| || |||||||| ||||| |||||||||| ||| |||||| ||||||| |    
T  19725758 ctgtttcgcataaattgattagggttggacccttaggtagtaatgtgacccatttaagatgtcaactgaaatctgtgaaactgctatgaactgttaagct 19725857  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  19725858 gattataatgtgatttaatgattaattacattacttgaaat 19725898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 11863063 - 11862923
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| ||| |||| ||||||||   ||||||||| |||| ||||||||||||| ||||||||||  || |||||||||||||| |||||| ||||||| |    
T  11863063 ctgtttcgtataaattgattaggattggacccttaggtattaatgtgacctatttaagatgttatttgaaatctgtgaagctgctatgaactgttaagct 11862964  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11862963 gattatgatgtgatttaatgattaattgcattacttgaaat 11862923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 11298383 - 11298514
Alignment:
Q  79 cataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataa 178  Q
    |||||||||||||| | ||||||||| |||||||||||||||||| |||||| ||||||| ||| ||||| |||||| |||| || ||||||| || |||    
T  11298383 cataatttgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatttgtgaggctgtt-tgaactgctaagttgtttgtaa 11298481  T
Q  179 tgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||| |||||||||||||||    
T  11298482 tgtgatttaatgattaaatgcattacttgaaat 11298514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 1982681 - 1982794
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    ||||| |||| |||||||||||||||||  |||||||||||||||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||||||    
T  1982681 atggagccttaggtagtaatgtgacctaattaagatgttaactgcaatatgtgaagttgttatgaactgttaagtt-attgtaatgtgatttaatgatta 1982779  T
Q  195 attgcattacttgaa 209  Q
    | |||||||||||||    
T  1982780 aatgcattacttgaa 1982794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 11851810 - 11851711
Alignment:
Q  112 aatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| |||||||||| ||| ||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  11851810 aatgtgacctatttaagatgttatctgaaatttgtgaagctgctatgaactgttaagctgattatgatgtgatttaatgattaattgcattacttgaaat 11851711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 3389817 - 3389919
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||||||||||| ||||||||||||||  | |||||||||||||||||| ||||||| || || |||||||||||||||||||| |||||||||    
T  3389817 ggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattact 3389916  T
Q  206 tga 208  Q
    |||    
T  3389917 tga 3389919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 3402837 - 3402939
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||||||||||| ||||||||||||||  | |||||||||| ||||||| ||||||| || || |||||||||||||||||||| |||||| ||    
T  3402837 ggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctattatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattcct 3402936  T
Q  206 tga 208  Q
    |||    
T  3402937 tga 3402939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 12037823 - 12037936
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    |||||||| || |||| || |||| |||| || |||||| | || |||||||||| |  || ||||||||||||||||||||||||||||||||||||||    
T  12037823 atggacccctgagtagcaacgtgatctatttaggatgtttaatgaaatctgtgaaaccattttgaaatgttaagttgattataatgtgatttaatgatta 12037922  T
Q  195 attgcattacttga 208  Q
    ||||||||||||||    
T  12037923 attgcattacttga 12037936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 327025 - 327148
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||| | ||| |||| |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||    
T  327025 ttgattagaaaaggaaccttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgat 327123  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    ||| ||||| |||||||||||||||    
T  327124 ttattgattgattgcattacttgaa 327148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 856394 - 856314
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||  ||||| |||||    
T  856394 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagcttatatgagatgtt 856314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 11557245 - 11557369
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  |||||| |||| ||||| ||| ||||||||||| ||||| ||| |||||||||| || |||||||||    
T  11557245 ttgattaggaatggaactttaggtagtaatgaaacctatttaaggtgttagctggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgat 11557344  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    |||| |||||| |||||||||||||    
T  11557345 ttaacgattaaatgcattacttgaa 11557369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 11595020 - 11595123
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  11595020 ggtagtaatgaaacctatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 11595119  T
Q  206 tgaa 209  Q
    ||||    
T  11595120 tgaa 11595123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 15482887 - 15482785
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  15482887 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 15482789  T
Q  206 tgaa 209  Q
    ||||    
T  15482788 tgaa 15482785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20461382 - 20461484
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  20461382 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 20461480  T
Q  206 tgaa 209  Q
    ||||    
T  20461481 tgaa 20461484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 7793231 - 7793333
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||  ||||| |||||||||||    
T  7793231 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttgttgattgattgcattact 7793329  T
Q  206 tgaa 209  Q
    ||||    
T  7793330 tgaa 7793333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 14499552 - 14499450
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||| ||| ||||||||||||||| ||||| |||||||||||    
T  14499552 ggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaa-ttgtttataatgtgatttattgattgattgcattact 14499454  T
Q  206 tgaa 209  Q
    ||||    
T  14499453 tgaa 14499450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 15877676 - 15877727
Alignment:
Q  73 gtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctata 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15877676 gtgtcgcataatttgattagagatggacccttgggtagtaatgagacctata 15877727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 2897718 - 2897803
Alignment:
Q  119 cctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||| ||||||||||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  2897718 cctatttaagatgttaactgttaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 2897803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 30066173 - 30066071
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  30066173 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 30066075  T
Q  206 tgaa 209  Q
    ||||    
T  30066074 tgaa 30066071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 42326177 - 42326074
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  |  ||||||| ||||| ||| |||||| ||| || ||||||||||||| |||||| |||||||||    
T  42326177 ggtagtaatgaaacctatttaagatgttaactgagacttgtgaagttgttaagaactgttaacttgtttgtaatgtgatttaacgattaaatgcattact 42326078  T
Q  206 tgaa 209  Q
    ||||    
T  42326077 tgaa 42326074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 14179690 - 14179624
Alignment:
Q  89 ttagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgtt 155  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||| |  ||||||||||||||||    
T  14179690 ttagagatggacccctgggtagtattgtgacctatataagaagttaattataatctgtgaagctgtt 14179624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 55023089 - 55022992
Alignment:
Q  111 taatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  55023089 taatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 55022992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 15877947 - 15878032
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgtta-agttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||| |||||||||||||||||| | |||||||| ||||||  ||||| ||| ||||||| |||||||||||| |||||||||||    
T  15877947 taagaagttaactgcaatctgtgatgttgttatgagatgttagtgttgaatatgatgtgatataatgattaatttcattacttgaa 15878032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 11070295 - 11070193
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |   |||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  11070295 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatatcgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 11070197  T
Q  206 tgaa 209  Q
    ||||    
T  11070196 tgaa 11070193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 11854960 - 11854858
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  |  ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  11854960 ggtactaatgagacctatctaagatgttaactgttaattgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 11854862  T
Q  206 tgaa 209  Q
    ||||    
T  11854861 tgaa 11854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 4589035 - 4589096
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  4589035 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 4589096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 5223243 - 5223182
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  5223243 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 5223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 12339645 - 12339584
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  12339645 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 12339584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 15964812 - 15964755
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  15964812 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 15964755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 15968736 - 15968679
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  15968736 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 15968679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 15972660 - 15972603
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  15972660 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 15972603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 19775612 - 19775551
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  19775612 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 19775551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 37439898 - 37439959
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  37439898 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 37439959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 11165411 - 11165513
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || |||||| || |  |||||||  |||| | ||||||||||||||| ||||| |||||||||||    
T  11165411 ggtactaatgagacctatctaagatgttaactgttatttgtgaaactatattgaaatgccaagt-gtttataatgtgatttattgattgattgcattact 11165509  T
Q  206 tgaa 209  Q
    ||||    
T  11165510 tgaa 11165513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 11300393 - 11300495
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  |  ||| ||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  11300393 ggtactaatgagacctatctaagatgttaactgttaattgtaaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 11300491  T
Q  206 tgaa 209  Q
    ||||    
T  11300492 tgaa 11300495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 11300692 - 11300753
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||| ||||||||||||||| ||||||||| |||||    
T  11300692 gctgttatgaactgctaagttgtttgtaatttgatttaatgattaaatgcattactcgaaat 11300753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 15465044 - 15464983
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || || ||||||||||||||||| ||||||||| |||||    
T  15465044 gctgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaat 15464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 14665570 - 14665531
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  14665570 attataatgtgaattaatgattaaatgcattacttgaaat 14665531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 7109887 - 7109823
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  7109887 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 7109823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 7113822 - 7113758
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  7113822 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 7113758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 22321853 - 22321789
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  22321853 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 22321789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 22336908 - 22336844
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  22336908 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 22336844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 27409564 - 27409628
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  27409564 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 27409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 28949913 - 28949849
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  28949913 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 28949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 6924 - 7123
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6924 ctgtgtcgcatgagttgattagggatgggcccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagct 7023  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||  |||| | | |||||||||||| |||||||||    
T  7024 gattataatgagatttaatgattaattgcattacttgagatgttaatgaatgaatgattgagttgatatttgcctctatttgatatctttgtatgatgtc 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 6152128 - 6151929
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  6152128 ctgtgtcgcatgaattgattagggatggactcttaggtagtaatgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgttaagct 6152029  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    | |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||| | |||||||| |||||||||||||    
T  6152028 gtttataatgtgatttaatgattaattgcattacttgaaatgttagtgaatgaatgattgagttgatacttgcttctatttgatatatttatatgatgtc 6151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 71 - 267
Target Start/End: Original strand, 22831224 - 22831419
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | ||| |||| ||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |    
T  22831224 ctgtgtcgcatgacttgtttagggatggactcttaggtagtaatgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgtta-gct 22831322  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgat 267  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  22831323 gattataatgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgactgagttgatacttgcttctatttgatatctttatatgat 22831419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 42865057 - 42865195
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  42865057 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaaggttaatgt 42865156  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42865157 tgattataatgtgatttaatgattaattgcattacttga 42865195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 83 - 270
Target Start/End: Complemental strand, 21022899 - 21022712
Alignment:
Q  83 atttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtg 182  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  21022899 atttgattaaggatggacccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctattatgaactgttaagctgattataatgtg 21022800  T
Q  183 atttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    | |||||||||||||||||||||||||||  |||  |||| |||||||||||||| ||||||| | |||||| |||||||||||||||    
T  21022799 aattaatgattaattgcattacttgaaatattaattaatggatgattgagttgatacttgcttctatttgatgtctttatatgatgtc 21022712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 21714823 - 21714627
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  21714823 ctgtgtcgcatgatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 21714724  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||| ||||| ||||||||||||||||||    | | ||||||||||||||| || |||||| |||| ||||||||| |||||||||||    
T  21714723 tgaatatgatgtgatataatgtttaattgcattacttgaa----ttatgaatgaatgattgagatgttgcttgtttttatttgatatcgttatatgatgt 21714628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 22449126 - 22449252
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22449126 ttgattaggaatggacccttaggtagtaatgtgacatatataagatgttaactgcaatctgtgaagctgttatgaactgttaagttgattataatgtgat 22449225  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||| |||||||||||||    
T  22449226 ttaatgattaatttcattacttgaaat 22449252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 18181967 - 18182107
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| ||||||| ||| |||||||||||||| | ||||||| ||||||||||| ||||||||||||||||| ||| ||||||    
T  18181967 ctgtgtcgcataaattgattagggatggactcttaggtagtaatgtgacttgtataagaagttaactgcaaactgtgaagctgttatgagatgctaagtt 18182066  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | ||||||||||||| |||||||||||||||||||||||||    
T  18182067 gtttataatgtgattcaatgattaattgcattacttgaaat 18182107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 21787886 - 21788008
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt-aa 167  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||| |     
T  21787886 acctgtgtcgcataacttgtttagagatggacccttgggtagtaatgtaacctatataagaagttaactgcaatctatgcagctgttatgaaatgttgat 21787985  T
Q  168 gttgattataatgtgatttaatg 190  Q
    ||||||||| |||| || |||||    
T  21787986 gttgattatgatgttatataatg 21788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 20091319 - 20091443
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |  ||||||| ||    
T  20091319 ctgtgtcgcataatttgatttgagatggacccttgggtagtaatgagacctatttaagaagttaactgcaatctgtgaagctgttacgtgatgttaatgt 20091418  T
Q  170 tgattataatgtgatttaatgattaa 195  Q
    ||| ||| ||||| ||||||||||||    
T  20091419 tgaatatgatgtg-tttaatgattaa 20091443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 18393824 - 18393947
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || |||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||| || || |||||||||    
T  18393824 ttgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaagctgtttgtaatgtgat 18393923  T
Q  185 ttaatgattaattgcattacttga 208  Q
    ||||||||||| ||||||||||||    
T  18393924 ttaatgattaaatgcattacttga 18393947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 3472787 - 3472911
Alignment:
Q  86 tgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatt 185  Q
    ||||||| | ||||| ||| |||||||||||||||||| |||||||||||  | |||||||||||||||||||||||| ||||||| ||  |||||||||    
T  3472787 tgattagggttggactcttaggtagtaatgtgacctat-taagatgttaatgggaatctgtgaagctgttatgaaatgctaagttgtttgaaatgtgatt 3472885  T
Q  186 taatgattaattgcattacttgaaat 211  Q
    |||||||||| || ||||||||||||    
T  3472886 taatgattaaatgaattacttgaaat 3472911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 45310227 - 45310350
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || |||||||||||| ||||| ||||||||||||||  |||||||||||||||||||| ||||||| || || |||||||||    
T  45310227 ttgattaggaatggaactttaggtagtaatgtggcctatttaagatgttaactgagatctgtgaagctgttatgaattgttaagctgtttgtaatgtgat 45310326  T
Q  185 ttaatgattaattgcattacttga 208  Q
    ||||||||||| |||||| |||||    
T  45310327 ttaatgattaaatgcattgcttga 45310350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 8761526 - 8761616
Alignment:
Q  118 acctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||||||||||||||| || ||||||||||||||||||||| | ||||| | ||||| |||||||||| ||||||||||||||||||||    
T  8761526 acctatataagatgttaaatgaaatctgtgaagctgttatgaactattaagctaattatgatgtgatttattgattaattgcattacttga 8761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 24783001 - 24783084
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||||||||||| ||  |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||    
T  24783001 taagatgttaactgaaaattgtgaagctgttatgaaatgctaagt-gattataatgtgatttattaattaattgcattacttgaa 24783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 45489624 - 45489727
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  45489624 ggtagtaatgaaacctatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 45489723  T
Q  206 tgaa 209  Q
    ||||    
T  45489724 tgaa 45489727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 3704946 - 3705049
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||| | | ||||||||||| ||||| ||| | |||||||| || ||||||||||||| |||||| |||||||||    
T  3704946 ggtagtaatgaaacctatttaagatgttagccggaatctgtgaagttgttaagaactattaagttgtttgtaatgtgatttaacgattaaatgcattact 3705045  T
Q  206 tgaa 209  Q
    ||||    
T  3705046 tgaa 3705049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 16080326 - 16080428
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||  |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  16080326 ggtactaatgagacctatttaagagattaactgagaactgtgaagcttttatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 16080424  T
Q  206 tgaa 209  Q
    ||||    
T  16080425 tgaa 16080428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 17678488 - 17678573
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||| ||||||| | |||||| |||| |||||||||| || |||||| ||||||||||||| |||||||||||||||    
T  17678488 taagatgttaactgaaatctgtaaggctgtt-tgaactgttaagttgtttgtaatgttatttaatgattaaatgcattacttgaaat 17678573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 48603790 - 48603706
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgtt 155  Q
    |||||| |||| | |||||||||||||||||| | ||||||| |||||||||||||||| ||||| |  ||||||||||||||||    
T  48603790 ctgtgttgcatgaattgattagagatggacccctaggtagtattgtgacctatataagaagttaattataatctgtgaagctgtt 48603706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 1010947 - 1010845
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  1010947 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 1010849  T
Q  206 tgaa 209  Q
    ||||    
T  1010848 tgaa 1010845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 33797762 - 33797674
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatg 190  Q
    |||| |||| ||||| ||||||| ||||||||||||||  | |||||||||| || |||||||||||| ||||||||||||||| |||||    
T  33797762 ccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag-tgattataatgtgatataatg 33797674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 22468543 - 22468626
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgtt 155  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||| |  ||| || ||| |  ||||||||||||||||    
T  22468543 tgtgtcgcataattcgattagagatggacccttgggtagtattgagaccttttgaagttggtaattataatctgtgaagctgtt 22468626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 36819190 - 36819292
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||| ||  | |||||||||| ||||||||||||||| |||||||| ||||||||| | ||| |||||||| ||    
T  36819190 ggtactaatgagacctatttaagatattaaatgagaactgtgaagcttttatgaaatgttaag-tgattatattgtgatttatttattgattgcatttct 36819288  T
Q  206 tgaa 209  Q
    ||||    
T  36819289 tgaa 36819292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 1925391 - 1925452
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  1925391 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 1925452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 20229071 - 20229132
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  20229071 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 20229132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 20924405 - 20924466
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  20924405 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 20924466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 33797461 - 33797408
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatta 203  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| |||||||    
T  33797461 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcatta 33797408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16375378 - 16375442
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  16375378 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 16375442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 19212091 - 19212015
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtga 183  Q
    |||| ||||| |||||||| ||||| || ||||  | |||||||||| ||||||||||||||| ||||||||| ||||    
T  19212091 ggtactaatgagacctataaaagatattgactgagaactgtgaagcttttatgaaatgttaag-tgattataaagtga 19212015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 20228729 - 20228793
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  20228729 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 20228793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 21407541 - 21407477
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  21407541 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 21407477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 52639727 - 52639663
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  52639727 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 52639663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22507876 - 22507916
Alignment:
Q  13 agatgactcttcatatggtaatcaggtctctcaaacatagc 53  Q
    |||||||| |||||||| |||||||||||||| ||||||||    
T  22507876 agatgactattcatatgataatcaggtctctcgaacatagc 22507916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 24673849 - 24673650
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| | ||||| |||  |||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| |    
T  24673849 ctgtgtcgcataaattgattagggttggactcttaagtagtaatgtgacctatataggatgttaattgcgatctgtgaagctattatgaaatgttaagct 24673750  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  24673749 gattatactgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatacttgcttctatttgatatctttatatgatgtc 24673650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 22740806 - 22740945
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||| ||||||| ||    
T  22740806 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctttgaagttgttatgagatgttaatgt 22740905  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    
T  22740906 tgaatatgatgtgatataatgattaattgcattacttgaa 22740945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 22758561 - 22758700
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||| ||||||| ||    
T  22758561 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaaattaactgcaatctatgaagctgttatgagatgttaatgt 22758660  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    
T  22758661 tgaatatgatgtgatataatgattaattgcattacttgaa 22758700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 23038308 - 23038112
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||||||||| |||||| ||||||  ||    
T  23038308 ctgtgtcgcatgatttgattagagatggacccttgggtagtattgagacctatataagaagttatctgcaatctgtgaagctcttatgagatgttagtgt 23038209  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    | | ||| ||||||| ||||| ||||||| ||||||||||    | | ||||||||||||||| || |||||| |||| ||||||||| |||||||||||    
T  23038208 taaatatgatgtgatataatgtttaattgaattacttgaa----ttatgaatgaatgattgagatgttgcttgtttttatttgatatcgttatatgatgt 23038113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 22798972 - 22799092
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||    
T  22798972 ctgtgtcgcataatttgattagagatggacccctgggtagtaatgtgacctatataagaagttaactgcaatttgtgaagctgttatgaaatgttaatgt 22799071  T
Q  170 tgattataatgtgatttaatg 190  Q
    ||| ||| ||||||| |||||    
T  22799072 tgaatatgatgtgatataatg 22799092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 21918162 - 21918288
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||  | ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||| |    
T  21918162 ctgtttcgcataaattgattatggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgctatgaactgttaagct 21918261  T
Q  171 gattataatgtgatttaatgattaatt 197  Q
    |||||||||||||||||||||||||||    
T  21918262 gattataatgtgatttaatgattaatt 21918288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 25963571 - 25963702
Alignment:
Q  79 cataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataa 178  Q
    ||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||| |||| || ||||||| || |||    
T  25963571 cataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaattgaaatctgtgaagctgtt-tgaactgctaagttgtttgtaa 25963669  T
Q  179 tgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||| |||||||||||||||    
T  25963670 tgtgatttaatgattaaatgcattacttgaaat 25963702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 22811765 - 22811896
Alignment:
Q  79 cataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataa 178  Q
    ||||| |||||||| | |||||| || |||||||||||||||||| ||||||||||| || |||||||||||||| |||||| | |||||||||||||||    
T  22811765 cataaattgattagtgttggacctttaggtagtaatgtgacctatttaagatgttaagtgaaatctgtgaagctgctatgaactattaagttgattataa 22811864  T
Q  179 tgtgatttaatgatt-aattgcattacttgaa 209  Q
    ||||||||||||||| ||||||||||| ||||    
T  22811865 tgtgatttaatgattaaattgcattacctgaa 22811896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 23103253 - 23103381
Alignment:
Q  82 aatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agttgattataatg 180  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||  | | |||    
T  23103253 aatttgattagagatggaccctttggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgttggatttgatg 23103352  T
Q  181 tgatttaatgattaattgcattacttgaa 209  Q
    |||| ||||| |||||||||| |||||||    
T  23103353 tgatataatgtttaattgcatgacttgaa 23103381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 40428700 - 40428597
Alignment:
Q  105 gggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattac 204  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||| || || |||||||||||||||||||| ||||||||    
T  40428700 gggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattac 40428601  T
Q  205 ttga 208  Q
    ||||    
T  40428600 ttga 40428597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 23019552 - 23019666
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||| ||    
T  23019552 ctgtgtcgcataatttaattagagttggacccttgggtagtaatgtgacctatataagaagttatttgcaatttgtgaagcttttatgaaatgttaatgt 23019651  T
Q  170 tgattataatgtgat 184  Q
    ||| ||| |||||||    
T  23019652 tgaatatgatgtgat 23019666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 40622054 - 40622148
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  40622054 ctgtttcgcatattttgtttagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgtt 40622148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 45678074 - 45678165
Alignment:
Q  179 tgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||| ||||||||||||||    
T  45678074 tgtgatttaatgattaattgcattacttgaaatgttaatgaatgaatgattgagttgatacttgcttctatttgatacctttatatgatgtc 45678165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 25961395 - 25961518
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  |||||| |||||||||| ||||||| ||||||  ||||||||| |||||||||| || |||||||||    
T  25961395 ttgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagctgcaatatgtgaatttgttatgaactgttaagttg-ttgtaatgtgat 25961493  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    ||||||||||| |||||||||||||    
T  25961494 ttaatgattaaatgcattacttgaa 25961518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 37524929 - 37524820
Alignment:
Q  79 cataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataa 178  Q
    ||||| |||||||  | ||||||||| |||||||||||||||||| ||||||||||| || | |||||||||||| |||||| ||||| | |||||||||    
T  37524929 cataagttgattaaggttggacccttaggtagtaatgtgacctat-taagatgttaattgaagtctgtgaagctgctatgaactgttaggctgattataa 37524831  T
Q  179 tgtgatttaat 189  Q
    |||||||||||    
T  37524830 tgtgatttaat 37524820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 24175056 - 24174932
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  |||||| |||||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||    
T  24175056 ttgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgat 24174957  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    |||| |||||| |||||||||||||    
T  24174956 ttaacgattaaatgcattacttgaa 24174932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 24655199 - 24655323
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  |||||| |||||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||    
T  24655199 ttgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgat 24655298  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    |||| |||||| |||||||||||||    
T  24655299 ttaacgattaaatgcattacttgaa 24655323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 19688638 - 19688740
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  19688638 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 19688736  T
Q  206 tgaa 209  Q
    ||||    
T  19688737 tgaa 19688740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 45678001 - 45678078
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtga 148  Q
    ||||||||||| | |||||||| ||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  45678001 ctgtgtcgcatgagttgattagggatggactcttaggtagtaatgtgacctatataggatgttaattgcaatctgtga 45678078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 24735627 - 24735525
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| || ||||||||    
T  24735627 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgatcgcattact 24735529  T
Q  206 tgaa 209  Q
    ||||    
T  24735528 tgaa 24735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 21327449 - 21327550
Alignment:
Q  107 gtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattactt 206  Q
    |||||| || ||| ||| ||| ||||||| || | ||||||||||||||||||| | ||||| || |||| |||||||||| ||||||||||||||||||    
T  21327449 gtagtagtgagacatatttaaaatgttaagtgaattctgtgaagctgttatgaactattaagctgtttatgatgtgatttattgattaattgcattactt 21327548  T
Q  207 ga 208  Q
    ||    
T  21327549 ga 21327550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 24716391 - 24716510
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||| |||||||||||||| || |||||| |||||| |||| || ||||||| || |||||||||    
T  24716391 ttgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaacctgtgaggctgtt-tgaactgctaagttgtttgtaatgtgat 24716489  T
Q  185 ttaatgattaattgcattact 205  Q
    |||| |||||| |||||||||    
T  24716490 ttaacgattaaatgcattact 24716510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 10101527 - 10101629
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  10101527 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 10101625  T
Q  206 tgaa 209  Q
    ||||    
T  10101626 tgaa 10101629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 21318518 - 21318619
Alignment:
Q  107 gtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattactt 206  Q
    |||||| || ||| ||| ||||||||||| || | | |||||||||| |||||| | ||||| || |||| |||||||||| ||||||||||||||||||    
T  21318518 gtagtagtgagacatatttaagatgttaagtgaattatgtgaagctgctatgaactattaagctgtttatgatgtgatttattgattaattgcattactt 21318617  T
Q  207 ga 208  Q
    ||    
T  21318618 ga 21318619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 41531266 - 41531321
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  41531266 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattact 41531321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 30345253 - 30345314
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  30345253 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 30345314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 24870115 - 24870016
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||| | | ||||||||| | ||||| ||| || ||||||| || ||||||||||||| |||||| | |||||||    
T  24870115 ggtagtaatgaaacctatttaagatgttagccggaatctgtgaggttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatacattact 24870016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 1283233 - 1283172
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||| ||||||||| ||||||||| |||||    
T  1283233 gctgttatgaactgctaagttgtttgtaatgtgattaaatgattaaatgcattactcgaaat 1283172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 31345056 - 31344995
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || ||||||||||| |||||||| ||||||||| |||||    
T  31345056 gctgttatgaactgctaagttgtttgtaatgtgatttcatgattaaatgcattactcgaaat 31344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 44370201 - 44370268
Alignment:
Q  127 agatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    |||||||||  | ||| ||||||||||||||||| | ||||| ||||||| |||||||||| ||||||    
T  44370201 agatgttaaacgaaatatgtgaagctgttatgaactattaagctgattatgatgtgatttattgatta 44370268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 12901432 - 12901496
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  12901432 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 12901496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 15477789 - 15477725
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  15477789 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 15477725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 24649543 - 24649479
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  24649543 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 24649479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 27601982 - 27601918
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  27601982 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 27601918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 41530930 - 41530994
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  41530930 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 41530994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 14945 - 14745
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||| | ||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  14945 ctgtgtcgcataatttgattagagatggactcctgggtagtaatgaaacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 14846  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| |||| |  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14845 tgaatatgatgtaagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 14746  T
Q  270 c 270  Q
    |    
T  14745 c 14745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 23960 - 23760
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  23960 ctgtgtcgcataatttgataagagatggacacctgggtagtaatgaaacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 23861  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| |||| |  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23860 tgaatatgatgtaagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 23761  T
Q  270 c 270  Q
    |    
T  23760 c 23760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 39384 - 39184
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  39384 ctgtgtcgcataatttgataagagatggacacctgggtagtaatgaaacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 39285  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| |||| |  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39284 tgaatatgatgtaagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 39185  T
Q  270 c 270  Q
    |    
T  39184 c 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 23501191 - 23501391
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||    
T  23501191 ctgtgtcgtataagttgattagagatggacccttgggtagtaatgagacctatataagaagttaattgcaatctgtgaagctgttatgaattgttaatgt 23501290  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  23501291 tgaatatgatgtgagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatcgttatatgatgt 23501390  T
Q  270 c 270  Q
    |    
T  23501391 c 23501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 23201642 - 23201441
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttggg-tagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-g 168  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||||| |    
T  23201642 ctgtgtcgcataatttgtttagagatggacccttggggtagtaatgagacctatagaagaagttaactgcaatctgtgaagctgttatgaattgttaatg 23201543  T
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    |||| ||| | ||||  | ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  23201542 ttgaatatgacgtgagatgatgtttaattgcattacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatcgttatatgatg 23201443  T
Q  269 tc 270  Q
    ||    
T  23201442 tc 23201441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 14079421 - 14079283
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||    
T  14079421 ctgtgtcgcataatttgattagagatggacccctgggtagtaatgtgacctatttaagaagttaactgcaatctgtgaagctcttatgaaatgttaatgt 14079322  T
Q  170 tgattataatgtgatttaatgattaattgcattacttga 208  Q
    ||| ||| |||||||||||||||||||||||||||||||    
T  14079321 tgaatatgatgtgatttaatgattaattgcattacttga 14079283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 23512380 - 23512179
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||| |||||||||| ||||| | |||| ||||||||| ||    
T  23512380 ctgtgtcgcataatttgattagaggtggacccttgggtagtattatgacctatataagaagtttactgcaatctttgaagatcttataaaatgttaatgt 23512281  T
Q  170 tgattataatgtgatttaatgattaattgcattacttg-aaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatg 268  Q
    ||| ||| |||| || | ||| |||||||||||||||| ||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  23512280 tgaatatgatgtaatatgatgtttaattgcattacttgaaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatacgatg 23512181  T
Q  269 tc 270  Q
    ||    
T  23512180 tc 23512179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 21366512 - 21366652
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||| |||||| ||||||| |    
T  21366512 ctgtttcgcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagct 21366611  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21366612 gattataatgtgatttaatgattaattgcattacttgaaat 21366652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 21873522 - 21873402
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  21873522 ctgtgtcgcataatttgattagagatgaacccttgggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 21873423  T
Q  170 tgattataatgtgatttaatg 190  Q
    ||| ||| ||||||| |||||    
T  21873422 tgaatatgatgtgatataatg 21873402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 37724177 - 37724038
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||||||||| ||| ||||||  ||    
T  37724177 ctgtgtcgcataatttgattagagatggacccttcggtagtattgagacctatataagaagttaactgcaatctgtgaagctgttttgagatgttagtgt 37724078  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||| ||||||||||||||||||    
T  37724077 tgaatatgatgtgatataatgtttaattgcattacttgaa 37724038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 26704339 - 26704244
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta 166  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  26704339 ctgtgtcgcatgatttgattagggatggacccttgggtagtaatgagacatatataagaagttaactgcaatctgtgaagctgttatgagatgtta 26704244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 26974072 - 26973977
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta 166  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  26974072 ctgtgtcgcatgatttgattagggatggacccttgggtagtaatgagacatatataagaagttaactgcaatctgtgaagctgttatgagatgtta 26973977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 20805820 - 20805680
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||||||||| || |||||||| | | ||||||| |||||||||||||||||| |||||||||||||| ||||||||| |||||| |||| || ||||||    
T  20805820 ctgtgtcgcacaaattgattagggtttgacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactgctaagtt 20805722  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatg 212  Q
      |  |||||||||||||||||||| ||||||||||||||||    
T  20805721 attggtaatgtgatttaatgattaaatgcattacttgaaatg 20805680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 20767207 - 20767102
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||||||||||| |||||||||||||| ||||||||| |||||| |||| |  ||||||| |  |||||||||||||||||||| |||||||||    
T  20767207 ggtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactactaagttgttggtaatgtgatttaatgattaaatgcattact 20767109  T
Q  206 tgaaatg 212  Q
    |||||||    
T  20767108 tgaaatg 20767102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 18769864 - 18769944
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  18769864 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgatatgagatgtt 18769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 22032575 - 22032507
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22032575 ttgattagagatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctg 22032507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 123176 - 123289
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    ||||| |||| ||||||||| |||||||| | ||||||||||||  |||||||| ||||||||||| ||||||| || || ||||||||||||| |||||    
T  123176 atggaaccttaggtagtaatatgacctatgtgagatgttaactgagatctgtgaggctgttatgaattgttaagctg-ttgtaatgtgatttaaagatta 123274  T
Q  195 attgcattacttgaa 209  Q
    | |||||||||||||    
T  123275 aatgcattacttgaa 123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 23458846 - 23458721
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||| |||||||||||||| ||||||||| |||||| |||| || ||||||| || |||||||||    
T  23458846 ttgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactgctaagttgtttgtaatgtgat 23458748  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    |||| |||||| |||||||||||||||    
T  23458747 ttaacgattaaatgcattacttgaaat 23458721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 23463107 - 23462982
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||| |||||||||||||| ||||||||| |||||| |||| || ||||||| || |||||||||    
T  23463107 ttgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactgctaagttgtttgtaatgtgat 23463009  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    |||| |||||| |||||||||||||||    
T  23463008 ttaacgattaaatgcattacttgaaat 23462982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 12028446 - 12028549
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  12028446 ggtagtaatgaaacctatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 12028545  T
Q  206 tgaa 209  Q
    ||||    
T  12028546 tgaa 12028549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 23451602 - 23451477
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||| |||||||||||||| ||||||||| |||||| |||| || ||||||| || ||| |||||    
T  23451602 ttgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactgctaagttgtttgtaaagtgat 23451504  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    |||| |||||| |||||||||||||||    
T  23451503 ttaacgattaaatgcattacttgaaat 23451477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 23572338 - 23572215
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatg-ttaagttgattataatgtga 183  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||| || ||||| ||| || |||||||||| ||||      
T  23572338 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatttgtgaagttgatatgagatgtttgagttgattatgatgtat 23572239  T
Q  184 tttaatgattaattgcattacttgaa 209  Q
    | ||||| |||  |||||||||||||    
T  23572238 tataatgttta--tgcattacttgaa 23572215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 24222112 - 24222009
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||| |||| | | ||||||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  24222112 ggtagtaatgaaacctatttaagacgttagccggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 24222013  T
Q  206 tgaa 209  Q
    ||||    
T  24222012 tgaa 24222009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 22757349 - 22757258
Alignment:
Q  118 acctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||| ||||||||||||||  | |||||||| ||||| ||| || ||||||| || ||||||||||||| |||||| |||||||||||||    
T  22757349 acctatttaagatgttaactgagacctgtgaagttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaa 22757258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 15236651 - 15236764
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    ||||| |||| |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| |||| || ||||||||||||||| | |||     
T  15236651 atggaacctttggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag-tgtttataatgtgatttattaattg 15236749  T
Q  195 attgcattacttgaa 209  Q
    |||||||||||||||    
T  15236750 attgcattacttgaa 15236764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11220592 - 11220531
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11220592 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 11220531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11225178 - 11225117
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11225178 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 11225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11229001 - 11228940
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11229001 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 11228940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11230990 - 11230929
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11230990 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 11230929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 18356546 - 18356468
Alignment:
Q  111 taatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatg 190  Q
    ||||| ||||||| ||||||||||||||  | |||||||||| || |||||||||||| ||||||||||||||| |||||    
T  18356546 taatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag-tgattataatgtgatataatg 18356468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11227011 - 11226950
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||| |||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  11227011 gctgatatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 11226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 18356136 - 18356075
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  18356136 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 18356075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 20911097 - 20911158
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  20911097 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 20911158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 10753206 - 10753147
Alignment:
Q  152 tgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  10753206 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 10753147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 40723849 - 40723904
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| |||||||||    
T  40723849 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 40723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 17919069 - 17919134
Alignment:
Q  142 tctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||||  |||||||||| |||||||||| || ||||||||||||| |||||| ||||||||||||    
T  17919069 tctgtgagactgttatgaattgttaagttg-ttgtaatgtgatttaaagattaaatgcattacttga 17919134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 17410602 - 17410562
Alignment:
Q  169 ttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  17410602 ttgattataatgtgatttattgattgattgcattacttgaa 17410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 24767493 - 24767532
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  24767493 attataatgtgaattaatgattaaatgcattacttgaaat 24767532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 31342301 - 31342258
Alignment:
Q  166 aagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||| || ||||||||||||| ||||||||||||||||||||    
T  31342301 aagttgtttgtaatgtgatttaacgattaattgcattacttgaa 31342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 20296033 - 20295969
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  20296033 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 20295969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 26680815 - 26680715
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  |  ||||||| ||||| |||    ||||||| || ||||||||||||| ||| || |||||||||    
T  26680815 ggtagtaatgaaacctatttaagatgttaactgagacttgtgaagttgttaagaa---ctaagttgtttgtaatgtgatttaacgatcaaatgcattact 26680719  T
Q  206 tgaa 209  Q
    ||||    
T  26680718 tgaa 26680715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 26952422 - 26952322
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  |  ||||||| ||||| |||    ||||||| || ||||||||||||| ||| || |||||||||    
T  26952422 ggtagtaatgaaacctatttaagatgttaactgagacttgtgaagttgttaagaa---ctaagttgtttgtaatgtgatttaacgatcaaatgcattact 26952326  T
Q  206 tgaa 209  Q
    ||||    
T  26952325 tgaa 26952322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 20910682 - 20910765
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatg 190  Q
    |||| ||||| ||||||| |||||||||| |||    |||||||||| || ||||||| ||||| |||||||||||||| |||||    
T  20910682 ggtactaatgagacctatttaagatgttatctgaggactgtgaagctattgtgaaatgctaagt-gattataatgtgatataatg 20910765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 15515 - 15711
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  15515 ctgtgtcgcttaatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 15614  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||  ||||||||||||||||||||||||    | | ||||||||||||||| |||||||||||| | ||||||||| |||||||||||    
T  15615 tgaatatgatgtgagataatgattaattgcattacttgaa----ttatgaatgaatgattgagatgatgcttgcttatatttgatatcgttatatgatgt 15710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 6376 - 6176
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||| || |||||||||| |  ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  6376 ctgtgtcgcataatttgattagagatggatccctgggtagtaaagaaacctatacaagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 6277  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| |||| |  | ||| ||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  6276 tgaatatgatgtaagatgatgtttaattgcatttcttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatctttatatgatgt 6177  T
Q  270 c 270  Q
    |    
T  6176 c 6176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 46573 - 46713
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  46573 ctgtgtcgcataaattgattagggatggactcttaggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgctaagtt 46672  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46673 gattataatgtgatttaatgattaattgcattacttgaaat 46713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 270
Target Start/End: Complemental strand, 18512 - 18317
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gtt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  18512 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgtt 18413  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    |||||| ||||||  | | | ||||||||||||||||||    | | ||||||||||||||| |||||| | ||||| ||||||||| |||| |||||||    
T  18412 gattatgatgtgagattacgtttaattgcattacttgaa----ttatgaatgaatgattgagatgatgcatacttttatttgatatcgttatgtgatgtc 18317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 12321588 - 12321728
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||| | |||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  12321588 ctgtgtcgcatgaattgattagggatggactcttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaaactgttatgaactgttaagtt 12321687  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12321688 gattataatgtgatttaatgattaattgcattacttgaaat 12321728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 270
Target Start/End: Complemental strand, 9703538 - 9703344
Alignment:
Q  73 gtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttg 171  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  9703538 gtgtcgcataatttgattagagatggacccttgggtattaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgttg 9703439  T
Q  172 attataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||| ||||||  | | | ||||||||||||||||||    | | ||||||||||||||| |||||| | ||||| ||||||||| |||| |||||||    
T  9703438 attatgatgtgagattacgtttaattgcattacttgaa----ttatgaatgaatgattgagatgatgcatacttttatttgatatcgttatgtgatgtc 9703344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 14430152 - 14430012
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||| |||||| ||||||| |    
T  14430152 ctgtttcgcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagct 14430053  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14430052 gattataatgtgatttaatgattaattgcattacttgaaat 14430012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 18154682 - 18154877
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||    
T  18154682 ctgtgtcgcatgatttgattaaagatggaccattgggtagtaatgagacctatataagaagttaactgcaatatgtgaagctgttatgagatgttaatgt 18154781  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||| ||| ||||| ||||||||||||||||||    | | ||||||||||||||| || |||||| |||| ||||||||| |||| ||||||    
T  18154782 tgaatatgatgcgatataatgtttaattgcattacttgaa----ttatgaatgaatgattgagatgttgcttg-ttttatttgatatcgttatgtgatgt 18154876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 256
Target Start/End: Complemental strand, 24054742 - 24054560
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||  ||    
T  24054742 ctgtgtcgcataattcgattagagatggacccttgggtagtaatgagacctatataaggagttaactgcaatctgtgaagctgttatgagatgttagtgt 24054643  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatat 256  Q
    ||||||| ||||||| | ||| |||| | |||||||||||    | | ||||||| ||||||| ||||||||||||||  |||||||    
T  24054642 tgattatgatgtgatatgatgtttaaatacattacttgaa----ttatgaatgaaagattgagatgatgcttgcttttaattgatat 24054560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 19649330 - 19649469
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| || ||| ||||||||||||||||||||| |||| |  ||||||  ||    
T  19649330 ctgtgtcgcataatttgattagagatggacccttgggtagtattgagacctaaattagaagttaactgcaatctgtgaagcagttaagtgatgttagtgt 19649429  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    
T  19649430 tgaatatgatgtgatataatgattaattgcattacttgaa 19649469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 3272079 - 3271955
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||||||||||||||| || ||| ||||||||||||||||| | ||||| ||||||| |||||||    
T  3272079 ttgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatatgtgaagctgttatgaactattaagctgattatgatgtgat 3271980  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    ||| |||||||||||||||||||||    
T  3271979 ttactgattaattgcattacttgaa 3271955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 11880525 - 11880459
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactg 138  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11880525 tgtgtcgcataatttgatttgagatggacccttgggtagtaatgtgacctatataagatgttaactg 11880459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 17137923 - 17138003
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  17137923 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgatatgagatgtt 17138003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 12318351 - 12318249
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  12318351 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaagt-gattataatgtgatttattgattgattgcattact 12318253  T
Q  206 tgaa 209  Q
    ||||    
T  12318252 tgaa 12318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 15605154 - 15605256
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  15605154 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaag-tgattataatgtgatttattgattgattgcattact 15605252  T
Q  206 tgaa 209  Q
    ||||    
T  15605253 tgaa 15605256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 12187273 - 12187205
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctg 153  Q
    ||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12187273 ttgattagagatggaccattaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctg 12187205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 16583484 - 16583378
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgca 200  Q
    |||| |||| ||||| |||||||||||||| |||||||  | |||||||||| |||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  16583484 ccttaggtactaatgagacctatataagatattaactgagaactgtgaagctattatgaaatgctaag-tgattataatgtgattt-atgattgattgca 16583387  T
Q  201 ttacttgaa 209  Q
    |||||||||    
T  16583386 ttacttgaa 16583378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 11312872 - 11312770
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  11312872 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 11312774  T
Q  206 tgaa 209  Q
    ||||    
T  11312773 tgaa 11312770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 9446019 - 9446143
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||||||  || ||| |||||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||    
T  9446019 ttgattaggaatggaactttaggtagtaatgaaacatatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgat 9446118  T
Q  185 ttaatgattaattgcattacttgaa 209  Q
    |||| |||||| |||||||||||||    
T  9446119 ttaacgattaaatgcattacttgaa 9446143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 15580904 - 15580813
Alignment:
Q  117 gacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||| || ||||||||||| || |||||||||| |||||||||| |||| |||||||||||||||||| | ||| |||||||||||||||    
T  15580904 gacctatttaggatgttaactgaaaactgtgaagctattatgaaatgctaag-tgattataatgtgatttattaattgattgcattacttgaa 15580813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 33331 - 33229
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  33331 ggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 33233  T
Q  206 tgaa 209  Q
    ||||    
T  33232 tgaa 33229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 70647 - 70749
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  70647 ggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 70745  T
Q  206 tgaa 209  Q
    ||||    
T  70746 tgaa 70749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 74756 - 74858
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  74756 ggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 74854  T
Q  206 tgaa 209  Q
    ||||    
T  74855 tgaa 74858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 13635346 - 13635453
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgca 200  Q
    |||| |||| ||||| | ||||| |||||| ||||| |  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  13635346 ccttaggtactaatgaggcctatttaagatattaacagagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgca 13635444  T
Q  201 ttacttgaa 209  Q
    |||||||||    
T  13635445 ttacttgaa 13635453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 2760347 - 2760265
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttga 208  Q
    |||||||||||||| ||||||||| |||||| | || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  2760347 taagatgttaactgaaatctgtgaggctgtt-taaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttga 2760265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 20569477 - 20569580
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||| |||  |  ||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  20569477 ggtagtaatgaaacctatttaagatgttagctgatacatgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 20569576  T
Q  206 tgaa 209  Q
    ||||    
T  20569577 tgaa 20569580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 15084040 - 15083979
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  15084040 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 15083979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 39722110 - 39722049
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  39722110 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 39722049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 42205338 - 42205257
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgattta 187  Q
    |||||||||||||||||| | ||||||||||||  | |||||||||||||||||| | ||||| |  || ||||||||||||    
T  42205338 ggtagtaatgtgacctatttgagatgttaactgagacctgtgaagctgttatgaattattaagctatttgtaatgtgattta 42205257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 45170272 - 45170329
Alignment:
Q  154 ttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  45170272 ttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 45170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 18454085 - 18454045
Alignment:
Q  13 agatgactcttcatatggtaatcaggtctctcaaacatagc 53  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  18454085 agatgaatcttcatatggtaatcaggtctctcaaacatagc 18454045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 25927431 - 25927490
Alignment:
Q  152 tgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  25927431 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 25927490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 1859012 - 1859073
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || || ||||||||||||||||| ||||||||| |||||    
T  1859012 gctgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaat 1859073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 13918706 - 13918767
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || || ||||||||||||||||| ||||||||| |||||    
T  13918706 gctgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaat 13918767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 39722452 - 39722388
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| |||||||||||||||||||||    
T  39722452 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattaattgcattacttgaa 39722388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 2530044 - 2530102
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||||||||  | |||||||||| || |||||||||||| |||||||||||||||    
T  2530044 taagatgttaactgggaactgtgaagctattgtgaaatgttaag-tgattataatgtgat 2530102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 2530316 - 2530371
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||| ||||| || ||||||| || |||||||||||||||||||| |||||||||    
T  2530316 gctgtcatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 2530371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 2832389 - 2832428
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  2832389 attataatgtgaattaatgattaaatgcattacttgaaat 2832428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 9751703 - 9751742
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  9751703 attataatgtgaattaatgattaaatgcattacttgaaat 9751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 39267847 - 39267886
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  39267847 attataatgtgaattaatgattaaatgcattacttgaaat 39267886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 12715050 - 12714986
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  12715050 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 12714986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 12718854 - 12718790
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  12718854 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 12718790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 12723765 - 12723701
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  12723765 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 12723701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 16114427 - 16114363
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  16114427 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 16114363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 16117580 - 16117516
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  16117580 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 16117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16907121 - 16907185
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  16907121 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 16907185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 18279589 - 18279525
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  18279589 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 18279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 18283552 - 18283488
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  18283552 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 18283488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 4003 - 3877
Alignment:
Q  83 atttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttgattataatgt 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4003 atttgattagagatggacccttgggtagtaatgtgacctatataagatattaattgcaatctgtgaagctgttatgaaatgttaatgttgattataatgt 3904  T
Q  182 gatttaatgattaattgcattacttga 208  Q
    |||||||||||||||||||||||||||    
T  3903 gatttaatgattaattgcattacttga 3877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 8434 - 8308
Alignment:
Q  83 atttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttgattataatgt 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8434 atttgattagagatggacccttgggtagtaatgtgacctatataagatattaattgcaatctgtgaagctgttatgaaatgttaatgttgattataatgt 8335  T
Q  182 gatttaatgattaattgcattacttga 208  Q
    |||||||||||||||||||||||||||    
T  8334 gatttaatgattaattgcattacttga 8308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 430 - 290
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||| | ||||||||||||||||||||| |||||||||    
T  430 ctgtgtcgcataaattgattagggatggacccttaggtagtaatgtgacctaattaagatgttaacggaaatctgtgaagctgttatgaactgttaagtt 331  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  330 gattataatgtgatttaatgactaattgcattacttgaaat 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 70069 - 69930
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  70069 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 69970  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    
T  69969 tgaatatgatgtgatataatgattaattgcattacttgaa 69930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 10471 - 10568
Alignment:
Q  111 taatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||  ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  10471 taatgagacctatttaagatattaactgagaactgtgaagctattatgaaatactaagt-gattataatgtgatttattgattgattgcattacttgaa 10568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 69 - 270
Target Start/End: Original strand, 8801 - 8999
Alignment:
Q  69 acctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt-aa 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| |     
T  8801 acctgtgtcgcataattcgattagagatggacccttgggtagtaatgagacctatataagaagttaactgtaatctgtgaagctgttatgaaatgttgat 8900  T
Q  168 gttgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgat 267  Q
    ||||| ||| ||||||  | ||| || ||| |||||||||||    | | ||||||||||||||| |||||||||||| | ||||||||| |||||||||    
T  8901 gttgaatatgatgtgagatgatgtttgatttcattacttgaa----ttatgaatgaatgattgagatgatgcttgcttgtatttgatatcgttatatgat 8996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 72 - 270
Target Start/End: Original strand, 4780 - 4979
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gtt 170  Q
    |||||||||||||||||| |||| ||||| ||||||||| | | |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||    
T  4780 tgtgtcgcataatttgatcagaggtggactcttgggtagcattatgacctatataagaagtttactgcaatctgtgaagctgttatgaaatgttaatgtt 4879  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    || ||| |||| |  | ||| ||| | ||| ||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  4880 gaatatgatgtaagatgatgtttattggcaatacttgaaatgttaatgaatgaatgattgagatgatgcttgcttttatttgatatccttatatgatgtc 4979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 20256 - 20061
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||||  ||    
T  20256 ctgtgtcgcatgatttgattagggatggacccttgggtagtaatgagacctatataagaagttaactgcaacctgtgaagctgttatgagatgttagtgt 20157  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||| ||||| ||||||||||||||||||    | | ||||||||||||||| ||||||||| |||| ||||||||  |||||||||||    
T  20156 tgaatatgatgtgatataatgtttaattgcattacttgaa----ttatgaatgaatgattgagatgatgcttg-ttttatttgatattgttatatgatgt 20062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 32707 - 32516
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||| |||||| ||||||| |||||||||| ||||||| | ||| ||||||| ||||||||||||||||||||||||||||||| ||    
T  32707 ctgtgtcgcataatttgtttagagttggacccctgggtagtaaagtgaccttt-taaaatgttaattgcaatctgtgaagctgttatgaaatgttaatgt 32609  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    |||||||||||||||||||||||||||||||||||||||    || | ||||||||||||||| ||    |||||||| ||||||||| |||| ||||||    
T  32608 tgattataatgtgatttaatgattaattgcattacttga----gttatgaatgaatgattgagatg----ttgcttttatttgatatcgttatgtgatgt 32517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 18300 - 18437
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gtt 170  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  18300 tgtgtcgcataatttgattagagatggacccctgggtagtaatgtgacctatttaagaagttaactacaatctgtgaagctgttatgaaatgttaatgtt 18399  T
Q  171 gattataatgtgatttaatgattaattgcattacttga 208  Q
    || ||| ||||||||||| || ||||||||||||||||    
T  18400 gaatatgatgtgatttaacgaataattgcattacttga 18437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 21415 - 21555
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||| |||||| ||||||| |    
T  21415 ctgtttcgcataaattgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgaaatttgtgaagctgctatgaactgttaagct 21514  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  21515 gattataatgtgatttaatgattaattgtattacttgaaat 21555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 80616 - 80677
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || |||||||  | |||||||||||||||||||| |||||| || |||||    
T  80616 gctgttatgaactgctaagttgtctgtaatgtgatttaatgattaaatgcattgctcgaaat 80677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 74 - 270
Target Start/End: Original strand, 65642 - 65834
Alignment:
Q  74 tgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agttga 172  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||  ||||||||| ||||||  |||||    
T  65642 tgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaacctgtgatcctgttatgagatgttagtgttga 65741  T
Q  173 ttataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
     ||| ||||||| ||||| |||||||||||| |||||    | | ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  65742 atatgatgtgatataatgtttaattgcattaattgaa----ttatgaatgaatgattgagatgatgcttg-ttttatttgatatccttatatgatgtc 65834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 53789 - 53687
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  53789 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 53691  T
Q  206 tgaa 209  Q
    ||||    
T  53690 tgaa 53687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 36348 - 36409
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  36348 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 36409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 18516 - 18642
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    |||||| | ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  18516 ttgatttgggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgaaatggtatgttgattataatgtgat 18615  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||| |||||||||||||    
T  18616 ttaatgattaattccattacttgaaat 18642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 1756 - 1623
Alignment:
Q  78 gcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattata 177  Q
    |||||| |||||||| | ||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||| |||||| ||||||| ||||||||    
T  1756 gcataaattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagctgattata 1657  T
Q  178 atgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||||||||||||    
T  1656 atgtgatttaatgattaattgcattacttgaaat 1623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 6156 - 6295
Alignment:
Q  72 tgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttg 171  Q
    |||||||||||| |||||||||||||||||| |  |||||||||||| |||| || |||||||| |||||||||||||||| ||||||||||||||||||    
T  6156 tgtgtcgcataacttgattagagatggacccctaagtagtaatgtgatctatttaggatgttaaatgcaatctgtgaagctattatgaaatgttaagttg 6255  T
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
     ||||| ||||||||||| |||||||||||||||||||||    
T  6256 tttatattgtgatttaattattaattgcattacttgaaat 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 36731 - 36535
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||||||  ||    
T  36731 ctgtgtcgcatgatttgtttagagaaggacccttgggtagtaatgagacctatttaagaagttaactgcaatctgtgaagctgttatgagatgttagtgt 36632  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||| ||||| |||||||||||||||||| |    | ||||||||||||||| || ||| || || | ||||||||| |||||||||||    
T  36631 tgaatatgatgtgatataatgtttaattgcattacttgaact----atgaatgaatgattgagatgttgcgtgtttatatttgatatcgttatatgatgt 36536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 16195 - 16315
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  16195 ctgtgtcgcataatttgattagaggtggacccttgggtagtaatatgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgttaatgt 16294  T
Q  170 tgattataatgtgatttaatg 190  Q
    ||| ||| ||||||| |||||    
T  16295 tgaatatgatgtgatataatg 16315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 42871 - 42752
Alignment:
Q  92 gagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatga 191  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  42871 gagatggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaactgttaagctgattctaatgtgatttaatga 42772  T
Q  192 ttaattgcattacttgaaat 211  Q
    |||| |||||||||||||||    
T  42771 ttaaatgcattacttgaaat 42752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 15321 - 15216
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  15321 ggtagtagtgagacctttataagatgttaactgcaatctgtgaagctgttataaaaagttaagttgattataatgtgatttaatgattaattgcattact 15222  T
Q  206 tgaaat 211  Q
    ||||||    
T  15221 tgaaat 15216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 71 - 270
Target Start/End: Complemental strand, 1613 - 1420
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||  ||||||||||| | ||||||  ||    
T  1613 ctgtgtcgcataatttgattagagatggacccttgggtagtattgagacctatataagaagttaaatgcaatctacgaagctgttattagatgttagtgt 1514  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgt 269  Q
    ||| ||| ||||||| ||||||||||||||||||||||||    | | ||||||||||||||   |||| |||||||| ||||||||| ||  |||||||    
T  1513 tgaatatgatgtgatataatgattaattgcattacttgaa----ttatgaatgaatgattga---gatgattgcttttatttgatatcgttgcatgatgt 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 38325 - 38439
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||    
T  38325 ctgtgtcgcataatttgattagagttggacccttgggtagtaatgtgacctatataagaagttagttgcaatctgtgaagctgttatgaaatgttaatgt 38424  T
Q  170 tgattataatgtgat 184  Q
    ||| ||| |||||||    
T  38425 tgaatatgatgtgat 38439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 23516 - 23626
Alignment:
Q  74 tgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttga 172  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||| |||||    
T  23516 tgtcgcataatttgattaatgttggacccttgggtagtaatgtgacctata-aagaagttagttgcaatctgtgaagctgttatgaaatgttaatgttga 23614  T
Q  173 ttataatgtgat 184  Q
     ||| |||||||    
T  23615 atatgatgtgat 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 1073 - 1193
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||    
T  1073 ctgtgtcgcataatttgattagagatggatccttgggtagtaatatgacctatataagaagttaactgcaatcagtgaagctgttatgaaatattaatgt 1172  T
Q  170 tgattataatgtgatttaatg 190  Q
    ||| ||| ||||||| |||||    
T  1173 tgaatatgatgtgatataatg 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 663 - 523
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| |||||||| |||||| | ||||||||||| |||||||||| ||||||| ||||||||||| ||  ||||||||||||  |||||| ||||||| |    
T  663 ctgtttcgcataagttgatttgggatggacccttaggtagtaatgcgacctatttaagatgttaattgagatctgtgaagctactatgaactgttaagct 564  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  563 gattataatgtgatttaatgattaaatgcattacttgaaat 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 855 - 715
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gt 169  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||| |  ||||||| ||    
T  855 ctgtgtcgcataatttgattagagatggacccttcggtagtaatgagacctatttaagaagttaactgcaatctgtgaagctgttacgtgatgttaatgt 756  T
Q  170 tgattataatgtgatttaatgatt-aattgcattacttgaa 209  Q
    ||| ||| ||| |||||||||||| ||||||| ||||||||    
T  755 tgaatatgatgcgatttaatgattaaattgcactacttgaa 715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 175040 - 174901
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agt 169  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||  ||    
T  175040 ctgtgtcgcatgatttgattagagatggaccctttggtagtaatgagacctatataagaagttaactgaaatctgtgaagctattatgagatgttagtgt 174941  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||| ||| | ||||| ||||| ||| ||||||||||||||    
T  174940 tgaatatgacgtgatataatgtttagttgcattacttgaa 174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 1930 - 2071
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatg-aaatgttaagt 169  Q
    ||||||||||| | | |||||| | ||||||||| |||||||||||||||||| |||||| ||||||| ||| ||||||||||||||| ||||| |||||    
T  1930 ctgtgtcgcatgaatcgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaagctgttatgaaaatgctaagt 2029  T
Q  170 tgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    || || |||||| ||||||||||||| |||||||||||||||    
T  2030 tgtttgtaatgtaatttaatgattaaatgcattacttgaaat 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 2099 - 1960
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| ||||| || |||||||||| ||||||||| || ||||||||||||||| |||||||||||| | |||||||||| ||||| |||| || ||||||    
T  2099 ctgtttcgcacaaattgattagagttggacccttagggagtaatgtgacctatttaagatgttaaccgaaatctgtgaaactgtt-tgaactgctaagtt 2001  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||||||||    
T  2000 gtttgtaatgtgatttaatgattaaatgcattacttgaaat 1960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 9781 - 9642
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||| ||||| || |||||||||| ||||||||| || ||||||||||||||| |||||||||||| | |||||||||| ||||| |||| || ||||||    
T  9781 ctgtttcgcacaaattgattagagttggacccttagggagtaatgtgacctatttaagatgttaaccgaaatctgtgaaactgtt-tgaactgctaagtt 9683  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || |||||||||||||||||||| |||||||||||||||    
T  9682 gtttgtaatgtgatttaatgattaaatgcattacttgaaat 9642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 1373 - 1476
Alignment:
Q  108 tagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttg 207  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||| |||| || |||||||||||||||    
T  1373 tagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaagctgattataatgtgacttaacgaataattgcattacttg 1472  T
Q  208 aaat 211  Q
    ||||    
T  1473 aaat 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 76 - 211
Target Start/End: Original strand, 6267 - 6401
Alignment:
Q  76 tcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgatta 175  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||| |||| || ||| ||| ||     
T  6267 tcgcataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatatgtgaagctgtt-tgaactgctaacttgtttg 6365  T
Q  176 taatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||| ||||||||| |||||    
T  6366 taatgtgatttaatgattaaatgcattactcgaaat 6401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 76 - 211
Target Start/End: Complemental strand, 44345 - 44211
Alignment:
Q  76 tcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgatta 175  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| || | || || ||||||| ||     
T  44345 tcgcataagttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct-ttttaaactgctaagttgtttg 44247  T
Q  176 taatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||||||||||| |||||||||| ||||    
T  44246 taatgtgatttaatgattaaatgcattacttaaaat 44211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 4686 - 4560
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||||||||| |||||||| || ||||||| || |||||||||| ||||||||||||||||||||    
T  4686 ttgattaggaatggaactttaggtagtagtgagacctatataagaagttaactgtaaactgtgaaactattatgaaatgctaagttgattataatgtgat 4587  T
Q  185 ttaatgattaattgcattacttgaaat 211  Q
    ||| |||||||||||||||||||||||    
T  4586 ttattgattaattgcattacttgaaat 4560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 48306 - 48431
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt-aagt 169  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||||| ||  ||||| ||||    
T  48306 ctgtgtcacataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaaatgcaatatgtgaagctgttgtgtgatgttaaagt 48405  T
Q  170 tgattataatgtgatttaatgattaa 195  Q
    ||| ||| | |||||||||| |||||    
T  48406 tgaatatgacgtgatttaataattaa 48431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 1166 - 1027
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagtt 170  Q
    |||||||||| || |||||||| | |||||||||  ||||||||||||||||| |||||||||||||| ||||||||| |||||| |||  || ||||||    
T  1166 ctgtgtcgcacaaattgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgtt-tgacctgctaagtt 1068  T
Q  171 gattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    | || ||||||||||||| |||||| |||||||||||||||    
T  1067 gtttgtaatgtgatttaacgattaaatgcattacttgaaat 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 19152 - 19275
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || ||||||| || ||||||||||||||||||| || ||||||||||||||||||||| | ||||| ||||||| |||||||    
T  19152 ttgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatctgtgaagctgttatgaactattaagctgattatgatgtgat 19251  T
Q  185 ttaatgattaattgcattacttga 208  Q
    ||| ||||||||||||||||||||    
T  19252 ttattgattaattgcattacttga 19275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 5820 - 5719
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||||||||||| ||||||||||||||  |||| ||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||||||||    
T  5820 ggtagtaatgtgacctat-taagatgttaactgagatctttgaagctgttatgaattgttaagctgattataatgtgattaaatgaataattgcattact 5722  T
Q  206 tga 208  Q
    |||    
T  5721 tga 5719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 7015 - 6914
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||||||||||||||||| ||||||||||||||  |||| ||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||||||||    
T  7015 ggtagtaatgtgacctat-taagatgttaactgagatctttgaagctgttatgaattgttaagctgattataatgtgattaaatgaataattgcattact 6917  T
Q  206 tga 208  Q
    |||    
T  6916 tga 6914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 24094 - 23924
Alignment:
Q  94 gatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtta-agttgattataatgtgatttaatgat 192  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||  ||||| ||| ||||||| ||||| |    
T  24094 gatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttaagagatgttagtgttgaatatgatgtgatataatg-t 23996  T
Q  193 taattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatgatgtc 270  Q
    ||||| ||||||||||| |    | ||||||||||||||| || ||||   |||| ||||||||  ||||||||||||    
T  23995 taatttcattacttgaact----atgaatgaatgattgagatgttgct--gttttatttgatattgttatatgatgtc 23924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 4085 - 4208
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgat 184  Q
    ||||||||  ||||| | || |||||||||||||||||| ||||||||||||||  || |||||| |||||||||| ||||||| || || |||||||||    
T  4085 ttgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagatatgtgaatctgttatgaattgttaagctgtttgtaatgtgat 4184  T
Q  185 ttaatgattaattgcattacttga 208  Q
    ||||||||||| ||||||||||||    
T  4185 ttaatgattaaatgcattacttga 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 192197 - 192300
Alignment:
Q  105 gggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattac 204  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||| | ||||| || || |||||||||||||||||||| ||||||||    
T  192197 gggtagtaatgtgacctatttaagatgttaactgagatctgtgaagttgttatgaatttttaagctgtttgtaatgtgatttaatgattaaatgcattac 192296  T
Q  205 ttga 208  Q
    ||||    
T  192297 ttga 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 27096 - 27002
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||| ||| ||| |||| ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  27096 ctgtttcgaatattttgtttagagatggacccttgggtagtaatgagacatatataagaagttaactgcaatctgtgaagctgttatgagatgtt 27002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 21670 - 21746
Alignment:
Q  89 ttagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21670 ttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatgagatgtt 21746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 29562 - 29638
Alignment:
Q  89 ttagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29562 ttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatgagatgtt 29638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 7717 - 7603
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||| || ||||| ||||||| || ||    
T  7717 atggaaccttaggtagtaatgaaacctatataagatgttaactggaatctgtgaagttgttaagaactgttaagttgtttgtaatgcgatttaacgaata 7618  T
Q  195 attgcattacttgaa 209  Q
    | |||||||||||||    
T  7617 aatgcattacttgaa 7603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 2317 - 2419
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| | |||||||||||| ||||||||||||||||||||| ||||||| || || |||||||||||||||||||| | |||||||    
T  2317 ggtagtaatgaaacctatcttagatgttaactggaatctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattact 2416  T
Q  206 tga 208  Q
    |||    
T  2417 tga 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 10177 - 10279
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| | |||||||||||| ||||||||||||||||||||| ||||||| || || |||||||||||||||||||| | |||||||    
T  10177 ggtagtaatgaaacctatcttagatgttaactggaatctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattact 10276  T
Q  206 tga 208  Q
    |||    
T  10277 tga 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 413921 - 414035
Alignment:
Q  95 atggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgatta 194  Q
    ||||| |||| |||||||| |  || |||||||||||||||||| ||||||||||| ||||| ||| |||||||||| || ||||||||||||| |||||    
T  413921 atggaaccttaggtagtaaagaaacatatataagatgttaactggaatctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgatta 414020  T
Q  195 attgcattacttgaa 209  Q
    | |||||||||||||    
T  414021 aatgcattacttgaa 414035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 71542 - 71454
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatg 190  Q
    |||| |||| ||||| ||||||| ||||||||||||||  | |||||||||| || |||||||||||| ||||||||||||||| |||||    
T  71542 ccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag-tgattataatgtgatataatg 71454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 71241 - 71188
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatta 203  Q
    ||||||||||| |||||||||| || ||||||||||| |||||||| |||||||    
T  71241 gctgttatgaactgttaagttgtttgtaatgtgattttatgattaaatgcatta 71188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 35393 - 35494
Alignment:
Q  107 gtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattactt 206  Q
    ||||||||||||||||| | ||||||||||||  | |||||||||||||||||| | ||||| || || |||||||||||||||||||| ||||||||||    
T  35393 gtagtaatgtgacctatttgagatgttaactgagacctgtgaagctgttatgaattattaagctgtttgtaatgtgatttaatgattaaatgcattactt 35492  T
Q  207 ga 208  Q
    ||    
T  35493 ga 35494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 2135 - 2055
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  2135 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgatatgagatgtt 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 15090 - 15190
Alignment:
Q  105 gggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattac 204  Q
    ||||||||||||||||||  ||||||||||||||  |||||||||||||||||||| || ||||  | || |||||||||||||||||||| ||||||||    
T  15090 gggtagtaatgtgacctacttaagatgttaactgagatctgtgaagctgttatgaattgctaagcagtttgtaatgtgatttaatgattaaatgcattac 15189  T
Q  205 t 205  Q
    |    
T  15190 t 15190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 19612 - 19712
Alignment:
Q  105 gggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattac 204  Q
    ||||||||||||||||||  ||||||||||||||  |||||||||||||||||||| || ||||  | || |||||||||||||||||||| ||||||||    
T  19612 gggtagtaatgtgacctacttaagatgttaactgagatctgtgaagctgttatgaattgctaagcagtttgtaatgtgatttaatgattaaatgcattac 19711  T
Q  205 t 205  Q
    |    
T  19712 t 19712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 2026 - 1922
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||| || ||||||||||||||||||| || ||| ||||| |||||| |||| || ||||||| || |||||||||||||||||||| |||||||||    
T  2026 ggtagtagtgagacctatataagatgttaaatgaaatatgtgaggctgtt-tgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 1928  T
Q  206 tgaaat 211  Q
    ||||||    
T  1927 tgaaat 1922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 8796 - 8693
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| || ||||||||||||| |||||| |||||||||    
T  8796 ggtagtaatgaaacctatttaagatgttaactgagacctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattact 8697  T
Q  206 tgaa 209  Q
    ||||    
T  8696 tgaa 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 66297 - 66399
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  66297 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 66395  T
Q  206 tgaa 209  Q
    ||||    
T  66396 tgaa 66399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 7771 - 7849
Alignment:
Q  188 atgattaattgcattacttgaaatggtaacgaatgaatgattgagttgatgcttgcttttgtttgatatctttatatga 266  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||| ||| ||||    
T  7771 atgattaattgcattacttgaaatgttaatgaatgactgattgagatgatgcttgcttttatttgatatcgttacatga 7849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 514 - 445
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgatta 175  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||| ||||||    
T  514 ggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaagctgatta 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 7549 - 7469
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt 165  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||| ||| ||||| |||||    
T  7549 ttgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctatgaaactgatatgagatgtt 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 17019 - 17097
Alignment:
Q  132 ttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| | ||| ||||||| |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17019 ttaactgaattctatgaagctattataaactgt-aagttgattataatgtgatttaatgattaattgcattacttgaaat 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 4690 - 4764
Alignment:
Q  110 gtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaa-gttgattataatgtgat 184  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||    
T  4690 gtaatgtgacctatataagaagttaactgcaatctgtgaagctg-tatgaaatgttaatgttgaatatgatgtgat 4764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13128 - 13026
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | ||||| |||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  13128 ggtactaatgagacctatttaagatattaactgagaactgtggagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 13030  T
Q  206 tgaa 209  Q
    ||||    
T  13029 tgaa 13026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 19393 - 19313
Alignment:
Q  125 taagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattactt 206  Q
    |||||| |||||||  | ||||| |||| |||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||    
T  19393 taagatattaactgagaactgtggagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattactt 19313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 422413 - 422516
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||||||  |||||| |||||||||||||  ||||||||||| ||||| ||| | |||||||| || ||||||||||||| || ||| |||||||||    
T  422413 ggtagtaatgaaacctatttaagatgttaactagaatctgtgaagttgttaagaactattaagttgtttgtaatgtgatttaacgactaaatgcattact 422512  T
Q  206 tgaa 209  Q
    ||||    
T  422513 tgaa 422516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 173503 - 173412
Alignment:
Q  117 gacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||||  ||||| |||||||  | || ||||||| |||||||||| ||||| ||||||| |||||| || ||||| |||||||||||||||    
T  173503 gacctattaaagatattaactgagaactttgaagctattatgaaatgctaagt-gattatattgtgatatattgattgattgcattacttgaa 173412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 13017 - 12894
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgtt-aagttgattataatgtga 183  Q
    |||||||  ||||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||  ||||| |||||  |||||||||| ||||      
T  13017 ttgattatggatggacccttaggtagtaatgagacctatataagaagttaactgcaatttgtgaagctaatatgagatgttggagttgattatgatgtat 12918  T
Q  184 tttaatgattaattgcattacttgaa 209  Q
    | ||||| |||  |||||||||||||    
T  12917 tataatgttta--tgcattacttgaa 12894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 80936 - 80834
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || |||||||||||  ||||||| |||| || ||||||||||||||| | ||| |||||||||||    
T  80936 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaag-tgtttataatgtgatttattaattgattgcattact 80838  T
Q  206 tgaa 209  Q
    ||||    
T  80837 tgaa 80834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 80559 - 80498
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| |  ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  80559 gctgttatgaactactaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 80498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 61532 - 61596
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  61532 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 61596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 65448 - 65512
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  65448 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 65512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 30637 - 30730
Alignment:
Q  117 gacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||| |||||||||||||| ||||||| ||| |||| |||| |  ||||||| || |||||||||||||||||||| |||||||||||||||    
T  30637 gacctatttaagatgttaactgaaatctgtaaagttgtt-tgaacttctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaat 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 13369 - 13468
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| |||||| |||||||  | ||||| |||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  13369 ggtactaatgagacctatttaagatattaactgataactgtgtagctattatgaaatgctaagt-gattataatgtgatttattgattgattgcattact 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 12646 - 12544
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| ||||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  12646 ggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 12548  T
Q  206 tgaa 209  Q
    ||||    
T  12547 tgaa 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 18551 - 18616
Alignment:
Q  143 ctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  18551 ctgtgaagcttttatgaaatgctaagt-gattataatgtgatttattgattgattgcattacttgaa 18616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 9542 - 9642
Alignment:
Q  101 ccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgca 200  Q
    |||| |||| ||||| ||||||| |||||| |||||||  | |||||||||| ||||||||| |||||| ||||||||||||||||| ||||| || |||    
T  9542 ccttaggtactaatgagacctatttaagatattaactgagaactgtgaagcttttatgaaattttaagt-gattataatgtgatttattgattgatcgca 9640  T
Q  201 tt 202  Q
    ||    
T  9641 tt 9642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 14349 - 14410
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  14349 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 14410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 207764 - 207825
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| |||||||||||||||    
T  207764 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaat 207825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 189639 - 189700
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  189639 gctgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaat 189700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 3757 - 3859
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    |||| ||||| ||||||| | ||||||||||||  || ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||    
T  3757 ggtactaatgagacctatctgagatgttaactgttatttgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattact 3855  T
Q  206 tgaa 209  Q
    ||||    
T  3856 tgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 576 - 485
Alignment:
Q  85 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattat 176  Q
    ||||||||  ||||| | || ||||||| || ||||||||||||||||||| || ||||||||||| ||||||||| | ||||| |||||||    
T  576 ttgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatctgtgaagttgttatgaactattaagctgattat 485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 7152 - 7253
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 205  Q
    ||||||| | ||| |||| | ||||||||||||  |||||||| |||||||||||| |||||  || || ||||||||||||| |||||| |||||||||    
T  7152 ggtagtattatgatctatgtgagatgttaactgagatctgtgaggctgttatgaaaagttaaactg-ttgtaatgtgatttaaagattaaatgcattact 7250  T
Q  206 tga 208  Q
    |||    
T  7251 tga 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 45342 - 45272
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattat 176  Q
    ||||||| || ||||||||||||||||||| || ||||||||||| ||||||||| | ||||| |||||||    
T  45342 ggtagtagtgagacctatataagatgttaaatgaaatctgtgaagttgttatgaactattaagctgattat 45272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 36202 - 36263
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||| |||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  36202 gctgttgtgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 36263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 35863 - 35927
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  35863 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 35927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 6859 - 6798
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  6859 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 6798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 32922 - 32983
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  32922 gctgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaat 32983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 31063 - 31002
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||    
T  31063 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaat 31002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 19899 - 19994
Alignment:
Q  106 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatt 202  Q
    |||| ||||| |||||||  ||||| |||| ||  | |||||||||| |||||||| ||||||| ||||||||||||||||| ||||| ||||||||    
T  19899 ggtactaatgagacctattaaagatattaattgagaactgtgaagcttttatgaaacgttaagt-gattataatgtgatttattgattgattgcatt 19994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 20391 - 20445
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattac 204  Q
    ||||||||||| || ||||||| || |||||||||||||||||||| ||||||||    
T  20391 gctgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattac 20445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 11763 - 11824
Alignment:
Q  150 gctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||| || ||||||| || ||||| |||||||||||||| ||||||||| |||||    
T  11763 gctgttatgaactgctaagttgtttttaatgcgatttaatgattaaatgcattactcgaaat 11824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 11592 - 11511
Alignment:
Q  118 acctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    |||||| |||||||||||||| |||||||||||||||||          ||||| || ||||||||||||| |||||| |||||||||||||    
T  11592 acctatttaagatgttaactggaatctgtgaagctgtta----------agttgtttgtaatgtgatttaacgattaaatgcattacttgaa 11511  T

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Target: scaffold0401 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2976 - 2932
Alignment:
Q  13 agatgactcttcatatggtaatcaggtctctcaaacatagcctga 57  Q
    ||||||||||||||||||||||||||||| |||||| || |||||    
T  2976 agatgactcttcatatggtaatcaggtctatcaaacttaacctga 2932  T

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Target: scaffold0324 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 15674 - 15642
Alignment:
Q  71 ctgtgtcgcataatttgattagagatggaccct 103  Q
    |||||||||||||||||||||||||||||||||    
T  15674 ctgtgtcgcataatttgattagagatggaccct 15642  T

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Target: scaffold1052 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 3074 - 3035
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  3074 attataatgtgaattaatgattaaatgcattacttgaaat 3035  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 9990 - 10029
Alignment:
Q  172 attataatgtgatttaatgattaattgcattacttgaaat 211  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  9990 attataatgtgaattaatgattaaatgcattacttgaaat 10029  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 5021 - 5085
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  5021 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 5085  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 928 - 992
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  928 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 992  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 58639 - 58703
Alignment:
Q  144 tgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 209  Q
    ||||||||| |  ||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||    
T  58639 tgtgaagctatattgaaatgctaagt-gtttataatgtgatttattgattgattgcattacttgaa 58703  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 211
Target Start/End: Original strand, 73725 - 73754
Alignment:
Q  182 gatttaatgattaattgcattacttgaaat 211  Q
    ||||||||||||||||||||||||||||||    
T  73725 gatttaatgattaattgcattacttgaaat 73754  T

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