View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9457_high_2 (Length: 269)
Name: NF9457_high_2
Description: NF9457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9457_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 45 - 251
Target Start/End: Original strand, 41066768 - 41066974
Alignment:
| Q |
45 |
atattttgtgcagttatgatgcctcctcatgaccaagctgctcctgcactttcttcttggcctactacttttcctacctccgttcttttacaagagcatc |
144 |
Q |
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| T |
41066768 |
atattttgtgcagttatgatgcctcctcatgaccaagctgctcctgcactttcttcttggcctactacttttcctacctccgttcttttacaagagcatc |
41066867 |
T |
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| Q |
145 |
gcgatgattataagccgctacttcatacgtgtaaagaagacaacaaaccaccccaggttcacatttttacttgtaaagaagacaatgtaatgttcaatgt |
244 |
Q |
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||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
41066868 |
gcgatgagtataagccgctacttcatacgtgtaatgaagacaacaaaccaccccaggttcacatttttacttgtaaagaagacagtgtaatgttcaatgt |
41066967 |
T |
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| Q |
245 |
tcttttt |
251 |
Q |
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| T |
41066968 |
tcttttt |
41066974 |
T |
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