View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9459_low_30 (Length: 250)
Name: NF9459_low_30
Description: NF9459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9459_low_30 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 42466726 - 42466975
Alignment:
| Q |
1 |
ttcatgcttcagctttagtaaattgcgtctaaaatgtgaagttgaaatatgaatcatccaatcttgatacaatataggtcaacaactgcataattttgtg |
100 |
Q |
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| T |
42466726 |
ttcatgcttaagctttagtaaattgcgtctaaaatgtgaagttgaaatatgaatcatccaatcttgatacaatataggtcaacaactgcatgattttgtg |
42466825 |
T |
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| Q |
101 |
atccaaattcaaccttttttcttgcataattaatgtgttgcatcatttgtcattggctttagtgatatcgtacttacaatgtgatttgttaataaaaaat |
200 |
Q |
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| T |
42466826 |
atccaaattcaaccttttttcttgcataattaatgtgttgcatcatttgtcattggcttgagtgatatcatacttacaatgtgatttgttgataaaaatt |
42466925 |
T |
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| Q |
201 |
tgaatttcttagagtaccttgcgtgagaagtgaaggatttcgattctctt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42466926 |
tgaatttcttagagtaccttgcgtgagaagtgaaggatttcgattctctt |
42466975 |
T |
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