View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9460_low_32 (Length: 241)
Name: NF9460_low_32
Description: NF9460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9460_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 11151506 - 11151728
Alignment:
| Q |
1 |
ccattaccaaaagctcgtcaaggtagttattcaagtacccttcatcaataccatagcttgaagcccgaacaataggatgggccgacccacgaactccgct |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11151506 |
ccattaccaaaagctcgtcaagatagttattcaagtacccttcatcaataccatagcttgaagcccgaacaataggatgggccgacccacgaactccgct |
11151605 |
T |
|
| Q |
101 |
gggtggaaaacggcagtaagatacagcttttgatgcggatttaccggattcgatcataggaaacatgattccttgtgggcctaaatctaaggctttcttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11151606 |
gggtggaaaacggcagtaagatacagcttttgatgcggatttaccggattcgatcataggaaacatgattccttgtgggcctaaatctaaggctttcttg |
11151705 |
T |
|
| Q |
201 |
gcccatgcagcggtggtttctgg |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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| T |
11151706 |
gcccatgcagcggtggtttctgg |
11151728 |
T |
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