View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9461_low_140 (Length: 226)
Name: NF9461_low_140
Description: NF9461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9461_low_140 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 29135125 - 29134916
Alignment:
| Q |
1 |
gaaatgatagaaaagttggttttgaaattgataagagtgagtgagtgag----acacaaatgtttgccacacacccattttttcatattattcatgtgca |
96 |
Q |
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| T |
29135125 |
gaaatgatagaaaagttggttttgaaattgataagagtgagtgagtgagtgagacacaaatgtttgccacacacccattttttcatattactcatgtgca |
29135026 |
T |
|
| Q |
97 |
aaaatatgattaatttagttgagtatatggtattcacattgaaaattatggttaattaatgtggttgaattagccacagcttgagtcatgaattgaatta |
196 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29135025 |
aaaataagattaatttagttgagtatatggtattcacattgaaaattatggttaattaatgtggttgaattagccacagcttgagtcatgaattgaatta |
29134926 |
T |
|
| Q |
197 |
ataatctatt |
206 |
Q |
| |
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|||||||||| |
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|
| T |
29134925 |
ataatctatt |
29134916 |
T |
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