View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9461_low_141 (Length: 226)

Name: NF9461_low_141
Description: NF9461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9461_low_141
NF9461_low_141
[»] chr1 (10 HSPs)
chr1 (17-73)||(46312065-46312121)
chr1 (15-74)||(46313274-46313333)
chr1 (26-76)||(14512669-14512719)
chr1 (18-76)||(46524537-46524595)
chr1 (25-73)||(2999491-2999539)
chr1 (17-73)||(46525844-46525900)
chr1 (17-63)||(3377511-3377557)
chr1 (17-75)||(50226390-50226448)
chr1 (25-74)||(3000223-3000272)
chr1 (17-74)||(50379974-50380031)
[»] chr5 (16 HSPs)
chr5 (88-155)||(30335930-30335997)
chr5 (15-73)||(3598922-3598980)
chr5 (17-76)||(124531-124590)
chr5 (15-74)||(3597322-3597381)
chr5 (15-73)||(17414544-17414602)
chr5 (17-73)||(5504138-5504194)
chr5 (21-73)||(17415695-17415747)
chr5 (17-76)||(8061853-8061912)
chr5 (17-75)||(5502916-5502973)
chr5 (17-74)||(121348-121405)
chr5 (17-74)||(24242016-24242073)
chr5 (17-63)||(12406051-12406097)
chr5 (17-54)||(3333959-3333996)
chr5 (17-74)||(8067452-8067509)
chr5 (17-74)||(14190489-14190546)
chr5 (17-73)||(14189664-14189720)
[»] chr4 (14 HSPs)
chr4 (88-155)||(22682106-22682173)
chr4 (17-74)||(8747690-8747747)
chr4 (15-74)||(40168638-40168697)
chr4 (17-74)||(8749048-8749105)
chr4 (15-72)||(40169779-40169836)
chr4 (17-73)||(33997898-33997954)
chr4 (17-74)||(8896955-8897012)
chr4 (15-73)||(55986309-55986367)
chr4 (17-73)||(48157680-48157736)
chr4 (15-58)||(14835583-14835626)
chr4 (17-63)||(25909497-25909543)
chr4 (17-63)||(49185581-49185626)
chr4 (19-64)||(2836908-2836953)
chr4 (15-76)||(31435852-31435912)
[»] chr3 (15 HSPs)
chr3 (15-73)||(26722533-26722591)
chr3 (15-76)||(26723904-26723965)
chr3 (17-73)||(10584084-10584140)
chr3 (17-73)||(32829740-32829796)
chr3 (17-75)||(51220604-51220662)
chr3 (17-73)||(51219462-51219518)
chr3 (15-74)||(21326319-21326378)
chr3 (25-76)||(32831100-32831151)
chr3 (15-74)||(54539108-54539167)
chr3 (15-74)||(54539498-54539557)
chr3 (15-76)||(48053123-48053184)
chr3 (21-74)||(53157182-53157234)
chr3 (17-63)||(33329880-33329926)
chr3 (17-63)||(44586044-44586090)
chr3 (17-63)||(51315742-51315788)
[»] chr8 (7 HSPs)
chr8 (88-140)||(40971783-40971835)
chr8 (15-74)||(38612218-38612277)
chr8 (15-74)||(38613417-38613476)
chr8 (25-76)||(13883878-13883929)
chr8 (15-74)||(23039527-23039586)
chr8 (17-54)||(28349565-28349602)
chr8 (15-75)||(23039122-23039182)
[»] chr2 (11 HSPs)
chr2 (15-74)||(10851912-10851971)
chr2 (17-74)||(27552451-27552508)
chr2 (15-74)||(45413477-45413536)
chr2 (15-73)||(28851672-28851730)
chr2 (15-75)||(10853145-10853205)
chr2 (15-75)||(45412333-45412393)
chr2 (17-73)||(27553809-27553865)
chr2 (15-73)||(1389233-1389291)
chr2 (15-70)||(28847336-28847391)
chr2 (15-76)||(1394854-1394915)
chr2 (17-74)||(12812835-12812892)
[»] chr7 (6 HSPs)
chr7 (21-74)||(9805432-9805485)
chr7 (17-73)||(35080283-35080339)
chr7 (17-74)||(35081603-35081660)
chr7 (15-74)||(12961983-12962042)
chr7 (24-74)||(23621990-23622040)
chr7 (21-63)||(36903529-36903571)
[»] chr6 (8 HSPs)
chr6 (15-74)||(20409066-20409125)
chr6 (15-76)||(20410217-20410278)
chr6 (15-76)||(16864492-16864553)
chr6 (17-70)||(22417661-22417714)
chr6 (15-74)||(6977026-6977085)
chr6 (15-73)||(6978137-6978195)
chr6 (18-76)||(12181592-12181650)
chr6 (15-74)||(16859335-16859394)
[»] scaffold0047 (1 HSPs)
scaffold0047 (15-58)||(32417-32460)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-58)||(4073-4116)
[»] scaffold0515 (1 HSPs)
scaffold0515 (17-63)||(3649-3695)
[»] scaffold0306 (1 HSPs)
scaffold0306 (17-63)||(3649-3695)


Alignment Details
Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 46312121 - 46312065
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46312121 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 46312065  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 46313274 - 46313333
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| | |||  ||||||||||||||||||||| ||||||||||    
T  46313274 aatagggggccaaaatcgcacctttgtgaaagttagggggtcaaaactgcagtttagcct 46313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 14512669 - 14512719
Alignment:
Q  26 aaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  14512669 aaaatcgcaacattagtaaacttagggggccaaaactgtagtttagccttt 14512719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 46524595 - 46524537
Alignment:
Q  18 agggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| ||||    
T  46524595 aggggaccaaaattgcaacattggtaaacttagggggccaaaactgtagtttagtcttt 46524537  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 2999539 - 2999491
Alignment:
Q  25 caaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  2999539 caaaatcgcaacattgacaaagttagagggtcaaaactgtagtttagcc 2999491  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 46525844 - 46525900
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||| |||||||||||||||||||| ||| |||||||| ||||||||||| ||||||    
T  46525844 taggaggccaaaatcgcaacattggcaaacttagggggccaaaactgtagattagcc 46525900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 3377557 - 3377511
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  3377557 tagggggccaaaatcgcaactttggaaaagttagggggctaaaactg 3377511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 50226448 - 50226390
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    |||||||||||||||||||| |||  ||||||||||||  ||||||||| || ||||||    
T  50226448 tagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcctt 50226390  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 3000223 - 3000272
Alignment:
Q  25 caaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||   ||| ||| ||||||||||||||||||||||||    
T  3000223 caaaatcgcaacattaacaaaattaaggggtcaaaactgtagtttagcct 3000272  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 50379974 - 50380031
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||| ||||||||||| | ||   ||||||||||||||||||||| ||||||||||    
T  50379974 taggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgcagtttagcct 50380031  T

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Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 30335930 - 30335997
Alignment:
Q  88 caaaatttattagcctttccttaaaacccgttctcttccatgctcaccgcaccaataagtaacaacaa 155  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  30335930 caaaatttattagcctttccttaaaactcgttctcttccacgctcaccgcaccaataagtaagaacaa 30335997  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 3598922 - 3598980
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  3598922 aatagggggccaaaatcgcaacattggtaaatttaggggaccaaaactgtagtttagcc 3598980  T

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Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 124531 - 124590
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||    
T  124531 tagggggccaaaatcgcaacattggcaaacttaagaggtcaaaactgtagtttagccttt 124590  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 3597381 - 3597322
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  3597381 aataaggggccaaaatcgcaacattagtaaacttagggggccaaaactgtagtttagcct 3597322  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 17414602 - 17414544
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||| |||||||||    
T  17414602 aatagggggccaaaatcgcaccattgtaaaagttagagggtcaaaactgcagtttagcc 17414544  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5504138 - 5504194
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||| ||||||||||||||||| ||| ||| | |||||||||||||||||||||    
T  5504138 tagggggtcaaaatcgcaacattggcaaacttaagaggtcaaaactgtagtttagcc 5504194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 17415695 - 17415747
Alignment:
Q  21 gggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||| |||||  ||||||||||||||||||||| |||||||||    
T  17415695 gggccaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagcc 17415747  T

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Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 8061912 - 8061853
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||||||||||| ||||   ||||||||||||| ||||||| ||||||||||||    
T  8061912 tagggggccaaaatcgcaccattctgaaagttagggggttaaaactgcagtttagccttt 8061853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 5502973 - 5502916
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    |||||||||||||| |||||||||| ||| ||| ||| |||||||||||||||||||||    
T  5502973 tagggggccaaaattgcaacattggcaaacttaaggg-tcaaaactgtagtttagcctt 5502916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 121405 - 121348
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||| |||||| |||||||||| ||| |||| | |||||||||||||||||||||    
T  121405 tagggggtcaaaattgcaacattggcaaatttagagtgtcaaaactgtagtttagcct 121348  T

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Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 24242073 - 24242016
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||| |||||||||| | |||  ||||||||||||||||||||| ||||||||||    
T  24242073 tagggggtcaaaatcgcacctttgtgaaagttagggggtcaaaactgcagtttagcct 24242016  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 12406097 - 12406051
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  12406097 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactg 12406051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 3333959 - 3333996
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttaggggg 54  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  3333959 tagggggccaaaatcgcaactttggaaaagttaggggg 3333996  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 8067452 - 8067509
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||| ||||   ||||||||||||  ||||||| ||||||||||    
T  8067452 tagggggccaaaatcgcaccattctgaaagttaggggggtaaaactgcagtttagcct 8067509  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 14190489 - 14190546
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||| ||||||||||| | ||   ||||||||||||||||||||| ||||||||||    
T  14190489 taggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgcagtttagcct 14190546  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 14189720 - 14189664
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||| ||||||||||| | ||   ||||||||||||||||||||| |||||||||    
T  14189720 taggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgcagtttagcc 14189664  T

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Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 22682106 - 22682173
Alignment:
Q  88 caaaatttattagcctttccttaaaacccgttctcttccatgctcaccgcaccaataagtaacaacaa 155  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  22682106 caaaatttattagcctttccttaaaactcgttctcttccacgctcaccgcaccaataagtaagaacaa 22682173  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 8747747 - 8747690
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  8747747 tagggggccaaaatcgcaacattggcaaacttaaggggtcaaaactgtagtttagcct 8747690  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 40168697 - 40168638
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  40168697 aatagggggccaaaatcgcaccattgtaaaagttagggggtcaaaactgcagtttagcct 40168638  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 8749048 - 8749105
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||    
T  8749048 tagggggccaaaatcgcaacattggcaaacttaaggggtcaaaagtgtagtttagcct 8749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 40169779 - 40169836
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagc 72  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||    
T  40169779 aatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagc 40169836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33997898 - 33997954
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  33997898 tagggggtcaaaatcgcaacattagcaaacttagggggtcaaaactgtagtttagcc 33997954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 8896955 - 8897012
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||| ||||||||| |||||||| ||| |||||| |||||||||||||||||||||    
T  8896955 taggggaccaaaatcgtaacattggcaaacttagggagtcaaaactgtagtttagcct 8897012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 55986309 - 55986367
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||| |||||||||| |||||  ||||||||||||| ||||||| |||||||||    
T  55986309 aatagggggtcaaaatcgcaccattgtgaaagttagggggttaaaactgcagtttagcc 55986367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 48157680 - 48157736
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||||||| | ||   ||||||||||||||||||||| |||||||||    
T  48157680 tagggggccaaaatcgcacctttatgaaagttagggggtcaaaactgcagtttagcc 48157736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 14835583 - 14835626
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaa 58  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  14835583 aatagggggccaaaatcgcaacttttataaagttagggggtcaa 14835626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 25909543 - 25909497
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||||||    
T  25909543 tagggggccaaaatcacaactttggaaaagttagggggttaaaactg 25909497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 49185626 - 49185581
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||    
T  49185626 tagggggccaaaatcgcaac-ttgggaaagttagggggttaaaactg 49185581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 2836953 - 2836908
Alignment:
Q  19 gggggccaaaatcgcaacattggtaaagttagggggtcaaaactgt 64  Q
    |||||||||||||||| | |||| ||||||||||||| ||||||||    
T  2836953 gggggccaaaatcgcagctttggaaaagttagggggttaaaactgt 2836908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 31435852 - 31435912
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||||||| ||||||||||||||||| |||  ||  ||| |||||||||||||||||||||    
T  31435852 aatagggggtcaaaatcgcaacattggcaaacata-agggccaaaactgtagtttagccttt 31435912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 26722591 - 26722533
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  26722591 aatagggggccaaaatcgcaacattggtaaacttagggggccaaaactgtagtttagcc 26722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 26723904 - 26723965
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||    
T  26723904 aatagggggccaaaattgcaacattagtaaacttagggggccaaaactgtagtttagccttt 26723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 10584084 - 10584140
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  10584084 tagggggccaaaatcgcaacattggcaaacttaggggatcaaaactgtagtttagcc 10584140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 32829796 - 32829740
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  32829796 tagggggccaaaatcgcaaaattggcaaacttagggggtcaaaactgtagtttagcc 32829740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 51220604 - 51220662
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    |||||||| |||||||||||||||  ||| ||| |||||||||||||||||||||||||    
T  51220604 tagggggctaaaatcgcaacattgacaaacttaaggggtcaaaactgtagtttagcctt 51220662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 51219518 - 51219462
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||| |||||||||  ||| ||||| |||||||||||||||||||||    
T  51219518 tagggggccaaaattgcaacattgacaaacttaggaggtcaaaactgtagtttagcc 51219462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 21326378 - 21326319
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||| ||||||| |||| ||||||||| ||| |||||||||| |||||||||||||    
T  21326378 aataggggaccaaaattgcaatattggtaaacttaaggggtcaaaagtgtagtttagcct 21326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 32831100 - 32831151
Alignment:
Q  25 caaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||||||||||||||  |||  |||||||||||||||||||||||||||||    
T  32831100 caaaatcgcaacattgacaaacatagggggtcaaaactgtagtttagccttt 32831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 54539167 - 54539108
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||| || |||||  ||||||||||||| ||||||| ||||||||||    
T  54539167 aatagggggccaaaatcacaccattgtgaaagttagggggttaaaactgcagtttagcct 54539108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 54539498 - 54539557
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| |||||  ||||||| ||||| ||||||| ||||||||||    
T  54539498 aatagggggccaaaatcgcaccattgtcaaagttaaggggttaaaactgcagtttagcct 54539557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 48053184 - 48053123
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||||||||||||| |||||  |||||||| |||| ||||||| |||||| |||||    
T  48053184 aatagggggccaaaatcgcaccattgtgaaagttagagggttaaaactgcagtttaaccttt 48053123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 53157182 - 53157234
Alignment:
Q  21 gggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  53157182 gggccagaatcgcaacattggcaaacttagggg-tcaaaactgtagtttagcct 53157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 33329880 - 33329926
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| |||||| |||||| |||||||    
T  33329880 tagggggccaaaatcgcaacgttgggaaagttggggggttaaaactg 33329926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 44586044 - 44586090
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  44586044 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactg 44586090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 51315742 - 51315788
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  51315742 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactg 51315788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 40971835 - 40971783
Alignment:
Q  88 caaaatttattagcctttccttaaaacccgttctcttccatgctcaccgcacc 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40971835 caaaatttattagcctttccttaaaacccgttctcttccatgctcactgcacc 40971783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 38612277 - 38612218
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  38612277 aatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcct 38612218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 38613417 - 38613476
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  38613417 aatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcct 38613476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 13883878 - 13883929
Alignment:
Q  25 caaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||||||||||||||  ||| ||| ||||||||||||||||||||||||||    
T  13883878 caaaatcgcaacattgacaaacttaaggggtcaaaactgtagtttagccttt 13883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 23039527 - 23039586
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||| ||||||||||| |||||  ||||||| ||||| ||||||| ||||||||||    
T  23039527 aataggggaccaaaatcgcaccattgtcaaagttaaggggttaaaactgcagtttagcct 23039586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 28349565 - 28349602
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttaggggg 54  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  28349565 tagggggccaaaatcgcaactttgggaaagttaggggg 28349602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 23039182 - 23039122
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    ||||||||||||||||  || |||||  ||||||||||||| ||||||| | |||||||||    
T  23039182 aatagggggccaaaattacaccattgtgaaagttagggggttaaaactgcaatttagcctt 23039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 10851971 - 10851912
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10851971 aatagggggttaaaatcgcaacattgataaagttagggggtcaaaactgtagtttagcct 10851912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 27552508 - 27552451
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  27552508 tagggagccaaaatcgcaacattggcaaatttagggggtcaaaactgtagtttagcct 27552451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 45413477 - 45413536
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  45413477 aatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagcct 45413536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 28851672 - 28851730
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  28851672 aatagggggtcaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcc 28851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 10853145 - 10853205
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    |||| |||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  10853145 aataaggggtcaaaatcgcaacattgataaagttaaggggtcaaaactgtagtttatcctt 10853205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 45412393 - 45412333
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcctt 75  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||||||| |||||||||||    
T  45412393 aatagggggtcaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagcctt 45412333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 27553809 - 27553865
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||| |||||||||||||||||| | ||| ||||||||| |||||||||||||||||    
T  27553809 taggaggccaaaatcgcaacattagcaaacttagggggttaaaactgtagtttagcc 27553865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 1389291 - 1389233
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||||||||||||||||| ||||   ||||||||||||| ||||||| |||||||||    
T  1389291 aatagggggccaaaatcgcaccattctgaaagttagggggttaaaactgcagtttagcc 1389233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 28847391 - 28847336
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagttta 70  Q
    |||||||| ||||||| |||||||||  ||| ||||||||||||||||| ||||||    
T  28847391 aataggggaccaaaattgcaacattgtgaaaattagggggtcaaaactgcagttta 28847336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 1394854 - 1394915
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||| ||||||||| ||||   ||||||||||||| ||||||| || |||||||||    
T  1394854 aatagggggctaaaatcgcaccattctgaaagttagggggttaaaactgcagattagccttt 1394915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 12812892 - 12812835
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||| ||||||| | ||| ||| | |||||||||||||| |||||||    
T  12812892 tagggggccaaaatctcaacattagcaaacttaagaggtcaaaactgtagcttagcct 12812835  T

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Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 9805432 - 9805485
Alignment:
Q  21 gggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9805432 gggccaaaatcgcaacattggcaaacttagggggtcaaaactgtagtttagcct 9805485  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 35080339 - 35080283
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  35080339 taggggaccaaaatcgcaacattggcaaacttagggggtcaaaactgtagtttagcc 35080283  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 35081603 - 35081660
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  35081603 tagggcgccaaaatcgcaacattgacaaacttagggggtcaaaactgtagtttagcct 35081660  T

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Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 12962042 - 12961983
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| |||||  ||||||||||||| ||||||| ||||||||||    
T  12962042 aatagggggccaaaatcgcaccattgtgaaagttagggggttaaaactgcagtttagcct 12961983  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 23621990 - 23622040
Alignment:
Q  24 ccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||| ||| ||||| || |||||||||||||||||||    
T  23621990 ccaaaatcgcaacattggcaaacttaggaggccaaaactgtagtttagcct 23622040  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 36903529 - 36903571
Alignment:
Q  21 gggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    ||||||||||||||||||||  ||||||||||||| |||||||    
T  36903529 gggccaaaatcgcaacattgaaaaagttagggggttaaaactg 36903571  T

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Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 20409125 - 20409066
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  20409125 aatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagcct 20409066  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 20410217 - 20410278
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||||||| ||||||||||||    
T  20410217 aatagggggtcaaaatcgcaccattgtaaaagttagggggtcaaaactgcagtttagccttt 20410278  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 16864492 - 16864553
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||| ||||||||||| |||||  ||||||||||||| ||||||| ||||||||||||    
T  16864492 aataggggaccaaaatcgcaccattgtaaaagttagggggttaaaactgcagtttagccttt 16864553  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 22417714 - 22417661
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagttta 70  Q
    |||||||||||||||| |||||| | ||| ||||||||||||||||||||||||    
T  22417714 tagggggccaaaatcgtaacattagcaaacttagggggtcaaaactgtagttta 22417661  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 6977085 - 6977026
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    |||||||||||||||| ||| |||||  ||||||||||||| ||||||| ||||||||||    
T  6977085 aatagggggccaaaattgcaccattgtgaaagttagggggttaaaactgcagtttagcct 6977026  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6978137 - 6978195
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcc 73  Q
    ||||||| |||||||||||| |||||  ||||||||||||| ||||||| |||||||||    
T  6978137 aatagggagccaaaatcgcaccattgtgaaagttagggggttaaaactgcagtttagcc 6978195  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 12181650 - 12181592
Alignment:
Q  18 agggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagccttt 76  Q
    |||||||||||||| |||||||   ||||||||| ||||||||||| ||||||||||||    
T  12181650 agggggccaaaatcccaacatttacaaagttaggaggtcaaaactgcagtttagccttt 12181592  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 16859394 - 16859335
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaaaactgtagtttagcct 74  Q
    ||||||||| |||||||||| |||||  ||||||||||||| |||| || ||||||||||    
T  16859394 aatagggggtcaaaatcgcaccattgtgaaagttagggggttaaaattgcagtttagcct 16859335  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 32417 - 32460
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaa 58  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  32417 aatagggggccaaaatcgcaacttttataaagttagggggtcaa 32460  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 4116 - 4073
Alignment:
Q  15 aatagggggccaaaatcgcaacattggtaaagttagggggtcaa 58  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  4116 aatagggggccaaaatcgcaacttttataaagttagggggtcaa 4073  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 3695 - 3649
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  3695 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactg 3649  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 3695 - 3649
Alignment:
Q  17 tagggggccaaaatcgcaacattggtaaagttagggggtcaaaactg 63  Q
    |||||||||||||||||||| |||| ||||||||||||  |||||||    
T  3695 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactg 3649  T

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